Fri Sep 24 04:41:17 UTC 2021 I: starting to build rasmol/bullseye/armhf on jenkins on '2021-09-24 04:41' Fri Sep 24 04:41:17 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_25/10215/console.log Fri Sep 24 04:41:17 UTC 2021 I: Downloading source for bullseye/rasmol=2.7.6.0-2 --2021-09-24 04:41:18-- http://cdn-fastly.deb.debian.org/debian/pool/main/r/rasmol/rasmol_2.7.6.0-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2198 (2.1K) Saving to: ‘rasmol_2.7.6.0-2.dsc’ 0K .. 100% 30.1M=0s 2021-09-24 04:41:18 (30.1 MB/s) - ‘rasmol_2.7.6.0-2.dsc’ saved [2198/2198] Fri Sep 24 04:41:18 UTC 2021 I: rasmol_2.7.6.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: rasmol Binary: rasmol, rasmol-doc Architecture: any all Version: 2.7.6.0-2 Maintainer: Debian Science Maintainers Uploaders: Teemu Ikonen Homepage: http://rasmol.org Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/science-team/rasmol Vcs-Git: https://salsa.debian.org/science-team/rasmol.git Build-Depends: debhelper-compat (= 13), bash-completion, xutils-dev, libx11-dev, libxext-dev, libxi-dev, x11proto-core-dev, libvte-2.91-dev, libgtk-3-dev, libcbf-dev, libcvector-dev | libcvector2-dev, libcqrlib-dev | libcqrlib2-dev, libcneartree-dev Package-List: rasmol deb science optional arch=any rasmol-doc deb doc optional arch=all Checksums-Sha1: d96139f64fb4de1d0ab2db86926bcfeb1050e8f2 9815399 rasmol_2.7.6.0.orig.tar.gz eb9cc356fd3dd006d948fccc3d2a0064ee43e1b7 75324 rasmol_2.7.6.0-2.debian.tar.xz Checksums-Sha256: 3e623692f66cc7a760527489ee0e10bebde5776092079a3c6bb6c6a63c83ecac 9815399 rasmol_2.7.6.0.orig.tar.gz e16cc5c88a0e6899f81602c3924a8fcd5373795e4cdba1a769224a23acf233f4 75324 rasmol_2.7.6.0-2.debian.tar.xz Files: 68b74b3699944bda30b293d87194bdfb 9815399 rasmol_2.7.6.0.orig.tar.gz a1cc0f74918e25fc1500886c1a616e07 75324 rasmol_2.7.6.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/FDEsRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEvhw/7BOtHul2y1aVtWShTu9PtsbeDm9ZJcVbD KnWRLDLZEmQ/Kf90qNbBOjXA59psuCfAOgYIUj1Yc7E92m0LcoJkJTqgkCCPo3Ak qYVAD0A5ETugG5Vel2uuEDLr3RrPsZkl5UaZhPWYoefaC/paychhZjlL9kUmFSje LGNYK8muNSV1xKfTEXO8lWAvW4Ddpe2/AoU7gJZFZWCQ9lQMZTVce2yY6C1L8NsZ iQprlmhuikKaF7giMw3sO3YJL0Xqi5FlqeKrxp1rdjVpqyszSPE7aioq6iqdsG1Q oOcHeS/Czb74My3PX56EEPVm06SWjt/6t/vwIv0mC/G99zNsNAXeJhN00YgW5DFj tghHfE3tzSlojnoGRoiQbwhuwztyfFrw+dZhOLc7Rq04nlCcH8ALELOXIht0WtZW jLTe1h9k7/AOqkKMPmMUWNaEOmkUnLKyBwVgYVLFZHxc04TRS2k2+T3Pv6ZnwTJ2 P224Y/3i/qUytAmL4SVZxhMH371k2aMZ7r5tJXBTDyysLVm/u5VDNOYQqglMaCS5 SLApISTYPW1+xcBSWnZlyh7jllR0NbGy1LAY6fOHfRJAKzOV7OICW2QPI+gVl72s jnow/KXI5AFfVkVIfCdBTokb0p8J8wC3a7s4U+AoOnkLyP4hcMBARx5QiQ6K7HK1 fCjPMfhRS78= =7ZS6 -----END PGP SIGNATURE----- Fri Sep 24 04:41:18 UTC 2021 I: Checking whether the package is not for us Fri Sep 24 04:41:18 UTC 2021 I: Starting 1st build on remote node virt32c-armhf-rb.debian.net. Fri Sep 24 04:41:18 UTC 2021 I: Preparing to do remote build '1' on virt32c-armhf-rb.debian.net. Fri Sep 24 04:57:15 UTC 2021 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Sep 23 16:41:25 -12 2021 I: pbuilder-time-stamp: 1632458485 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [rasmol_2.7.6.0-2.dsc] I: copying [./rasmol_2.7.6.0.orig.tar.gz] I: copying [./rasmol_2.7.6.0-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.ELNklRVy/trustedkeys.kbx': General error gpgv: Signature made Mon Nov 30 03:14:19 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./rasmol_2.7.6.0-2.dsc dpkg-source: info: extracting rasmol in rasmol-2.7.6.0 dpkg-source: info: unpacking rasmol_2.7.6.0.orig.tar.gz dpkg-source: info: unpacking rasmol_2.7.6.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_imakefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/7545/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='64b5350065c1418483fe5ebb17764608' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='7545' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.0KrkyyXH3h/pbuilderrc_of8A --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.0KrkyyXH3h/b1 --logfile b1/build.log rasmol_2.7.6.0-2.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux virt32c 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-4 (2021-08-03) armv7l GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Aug 4 08:25 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 2021 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Jul 28 07:09 more -rwsr-xr-x 1 root root 34400 Jul 28 07:09 mount -rwxr-xr-x 1 root root 9824 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Sep 20 21:25 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Jul 28 07:09 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 2021 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 22108 Jul 28 07:09 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/7545/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), bash-completion, xutils-dev, libx11-dev, libxext-dev, libxi-dev, x11proto-core-dev, libvte-2.91-dev, libgtk-3-dev, libcbf-dev, libcvector-dev | libcvector2-dev, libcqrlib-dev | libcqrlib2-dev, libcneartree-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on xutils-dev; however: Package xutils-dev is not installed. pbuilder-satisfydepends-dummy depends on libx11-dev; however: Package libx11-dev is not installed. pbuilder-satisfydepends-dummy depends on libxext-dev; however: Package libxext-dev is not installed. pbuilder-satisfydepends-dummy depends on libxi-dev; however: Package libxi-dev is not installed. pbuilder-satisfydepends-dummy depends on x11proto-core-dev; however: Package x11proto-core-dev is not installed. pbuilder-satisfydepends-dummy depends on libvte-2.91-dev; however: Package libvte-2.91-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtk-3-dev; however: Package libgtk-3-dev is not installed. pbuilder-satisfydepends-dummy depends on libcbf-dev; however: Package libcbf-dev is not installed. pbuilder-satisfydepends-dummy depends on libcvector-dev | libcvector2-dev; however: Package libcvector-dev is not installed. Package libcvector2-dev is not installed. pbuilder-satisfydepends-dummy depends on libcqrlib-dev | libcqrlib2-dev; however: Package libcqrlib-dev is not installed. Package libcqrlib2-dev is not installed. pbuilder-satisfydepends-dummy depends on libcneartree-dev; however: Package libcneartree-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} bsdextrautils{a} dbus{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dmsetup{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} gir1.2-atk-1.0{a} gir1.2-atspi-2.0{a} gir1.2-freedesktop{a} gir1.2-gdkpixbuf-2.0{a} gir1.2-glib-2.0{a} gir1.2-gtk-3.0{a} gir1.2-harfbuzz-0.0{a} gir1.2-pango-1.0{a} gir1.2-vte-2.91{a} glib-networking{a} glib-networking-common{a} glib-networking-services{a} groff-base{a} gsettings-desktop-schemas{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libapparmor1{a} libarchive-zip-perl{a} libargon2-1{a} libatk-bridge2.0-0{a} libatk-bridge2.0-dev{a} libatk1.0-0{a} libatk1.0-data{a} libatk1.0-dev{a} libatspi2.0-0{a} libatspi2.0-dev{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblkid-dev{a} libbrotli-dev{a} libbrotli1{a} libbsd0{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libcap2{a} libcbf-dev{a} libcbf1{a} libcneartree-dev{a} libcneartree7{a} libcolord2{a} libcqrlib-dev{a} libcqrlib2{a} libcryptsetup12{a} libcups2{a} libcvector-dev{a} libcvector2{a} libdatrie-dev{a} libdatrie1{a} libdbus-1-3{a} libdbus-1-dev{a} libdconf1{a} libdebhelper-perl{a} libdeflate0{a} libdevmapper1.02.1{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libegl1-mesa-dev{a} libelf1{a} libepoxy-dev{a} libepoxy0{a} libevent-2.1-7{a} libexpat1{a} libexpat1-dev{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig-dev{a} libfontconfig1{a} libfontconfig1-dev{a} libfreetype-dev{a} libfreetype6{a} libfreetype6-dev{a} libfribidi-dev{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf-2.0-dev{a} libgdk-pixbuf2.0-bin{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgirepository-1.0-1{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0{a} libgnutls-openssl27{a} libgnutls28-dev{a} libgnutlsxx28{a} libgraphite2-3{a} libgraphite2-dev{a} libgtk-3-0{a} libgtk-3-common{a} libgtk-3-dev{a} libharfbuzz-dev{a} libharfbuzz-gobject0{a} libharfbuzz-icu0{a} libharfbuzz0b{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libice-dev{a} libice6{a} libicu-dev{a} libicu67{a} libidn2-dev{a} libip4tc2{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjson-c5{a} libjson-glib-1.0-0{a} libjson-glib-1.0-common{a} libkmod2{a} liblcms2-2{a} libllvm11{a} liblzo2-2{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmount-dev{a} libmpdec3{a} libopengl-dev{a} libopengl0{a} libp11-kit-dev{a} libpam-systemd{a} libpango-1.0-0{a} libpango1.0-dev{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpangoxft-1.0-0{a} libpcre16-3{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix2{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpixman-1-dev{a} libpng-dev{a} libpng16-16{a} libproxy1v5{a} libpsl5{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} librest-0.7-0{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol1-dev{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libsoup-gnome2.4-1{a} libsoup2.4-1{a} libsub-override-perl{a} libsz2{a} libtasn1-6-dev{a} libthai-data{a} libthai-dev{a} libthai0{a} libtiff5{a} libtool{a} libuchardet0{a} libunbound8{a} libvte-2.91-0{a} libvte-2.91-common{a} libvte-2.91-dev{a} libvulkan1{a} libwayland-bin{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-dev{a} libwayland-egl1{a} libwayland-server0{a} libwebp6{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxcomposite-dev{a} libxcomposite1{a} libxcursor-dev{a} libxcursor1{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi-dev{a} libxi6{a} libxinerama-dev{a} libxinerama1{a} libxkbcommon-dev{a} libxkbcommon0{a} libxml2{a} libxrandr-dev{a} libxrandr2{a} libxrender-dev{a} libxrender1{a} libxshmfence1{a} libxtst-dev{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} media-types{a} nettle-dev{a} pango1.0-tools{a} pkg-config{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} shared-mime-info{a} systemd{a} systemd-sysv{a} systemd-timesyncd{a} ucf{a} uuid-dev{a} wayland-protocols{a} x11-common{a} x11proto-dev{a} x11proto-input-dev{a} x11proto-randr-dev{a} x11proto-record-dev{a} x11proto-xext-dev{a} x11proto-xinerama-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} xutils-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core ca-certificates curl libarchive-cpio-perl libgtk-3-bin libltdl-dev libmail-sendmail-perl libnss-systemd libpng-tools librsvg2-common libtasn1-doc libvte-2.91-doc lynx mesa-vulkan-drivers publicsuffix wget xdg-user-dirs 0 packages upgraded, 320 newly installed, 0 to remove and 0 not upgraded. Need to get 132 MB of archives. After unpacking 466 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf libapparmor1 armhf 2.13.6-10 [94.5 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libcap2 armhf 1:2.44-1 [21.2 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf libargon2-1 armhf 0~20171227-0.2 [20.4 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf dmsetup armhf 2:1.02.175-2.1 [92.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf libdevmapper1.02.1 armhf 2:1.02.175-2.1 [135 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf libjson-c5 armhf 0.15-2 [39.0 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libcryptsetup12 armhf 2:2.3.5-1 [223 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libip4tc2 armhf 1.8.7-1 [32.6 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf libkmod2 armhf 28-1 [48.5 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf systemd-timesyncd armhf 247.3-6 [130 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf systemd armhf 247.3-6 [4298 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf systemd-sysv armhf 247.3-6 [113 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf libdbus-1-3 armhf 1.12.20-2 [196 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf dbus armhf 1.12.20-2 [222 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-8 [138 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libpython3.9-minimal armhf 3.9.2-1 [790 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf python3.9-minimal armhf 3.9.2-1 [1630 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf media-types all 4.0.0 [30.3 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf libmpdec3 armhf 2.5.1-1 [74.9 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf readline-common all 8.1-1 [73.7 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libreadline8 armhf 8.1-1 [147 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf libpython3.9-stdlib armhf 3.9.2-1 [1608 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf python3.9 armhf 3.9.2-1 [466 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf python3 armhf 3.9.2-3 [37.9 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf bash-completion all 1:2.11-2 [234 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libpam-systemd armhf 247.3-6 [262 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf ucf all 3.0043 [74.0 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf2.0-common all 2.42.2+dfsg-1 [320 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf libglib2.0-0 armhf 2.66.8-1 [1206 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf shared-mime-info armhf 2.0-1 [699 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [123 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf libpng16-16 armhf 1.6.37-3 [277 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf libdeflate0 armhf 1.7-1 [43.1 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf libwebp6 armhf 0.6.1-2.1 [226 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf libtiff5 armhf 4.2.0-1 [271 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.2+dfsg-1 [131 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf gtk-update-icon-cache armhf 3.24.24-4 [86.4 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf adwaita-icon-theme all 3.38.0-1 [10.9 MB] Get: 55 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf dbus-user-session armhf 1.12.20-2 [96.2 kB] Get: 62 http://deb.debian.org/debian bullseye/main armhf libdconf1 armhf 0.38.0-2 [39.4 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf dconf-service armhf 0.38.0-2 [33.6 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf dconf-gsettings-backend armhf 0.38.0-2 [27.0 kB] Get: 65 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 66 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 67 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 68 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 69 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 70 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 71 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 72 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 73 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 74 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 75 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 76 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 77 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 78 http://deb.debian.org/debian bullseye/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get: 79 http://deb.debian.org/debian bullseye/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [357 kB] Get: 80 http://deb.debian.org/debian bullseye/main armhf fonts-dejavu-core all 2.37-2 [1069 kB] Get: 81 http://deb.debian.org/debian bullseye/main armhf fontconfig-config all 2.13.1-4.2 [281 kB] Get: 82 http://deb.debian.org/debian bullseye/main armhf libfontconfig1 armhf 2.13.1-4.2 [329 kB] Get: 83 http://deb.debian.org/debian bullseye/main armhf fontconfig armhf 2.13.1-4.2 [415 kB] Get: 84 http://deb.debian.org/debian bullseye/main armhf libgirepository-1.0-1 armhf 1.66.1-1+b1 [83.9 kB] Get: 85 http://deb.debian.org/debian bullseye/main armhf gir1.2-glib-2.0 armhf 1.66.1-1+b1 [151 kB] Get: 86 http://deb.debian.org/debian bullseye/main armhf libatk1.0-data all 2.36.0-2 [149 kB] Get: 87 http://deb.debian.org/debian bullseye/main armhf libatk1.0-0 armhf 2.36.0-2 [45.2 kB] Get: 88 http://deb.debian.org/debian bullseye/main armhf gir1.2-atk-1.0 armhf 2.36.0-2 [26.0 kB] Get: 89 http://deb.debian.org/debian bullseye/main armhf gir1.2-freedesktop armhf 1.66.1-1+b1 [33.4 kB] Get: 90 http://deb.debian.org/debian bullseye/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 91 http://deb.debian.org/debian bullseye/main armhf libmd0 armhf 1.0.3-3 [27.4 kB] Get: 92 http://deb.debian.org/debian bullseye/main armhf libbsd0 armhf 0.11.3-1 [103 kB] Get: 93 http://deb.debian.org/debian bullseye/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 94 http://deb.debian.org/debian bullseye/main armhf libxcb1 armhf 1.14-3 [136 kB] Get: 95 http://deb.debian.org/debian bullseye/main armhf libx11-data all 2:1.7.2-1 [311 kB] Get: 96 http://deb.debian.org/debian bullseye/main armhf libx11-6 armhf 2:1.7.2-1 [713 kB] Get: 97 http://deb.debian.org/debian bullseye/main armhf libatspi2.0-0 armhf 2.38.0-4 [63.1 kB] Get: 98 http://deb.debian.org/debian bullseye/main armhf gir1.2-atspi-2.0 armhf 2.38.0-4 [22.7 kB] Get: 99 http://deb.debian.org/debian bullseye/main armhf gir1.2-gdkpixbuf-2.0 armhf 2.42.2+dfsg-1 [19.7 kB] Get: 100 http://deb.debian.org/debian bullseye/main armhf libgraphite2-3 armhf 1.3.14-1 [70.5 kB] Get: 101 http://deb.debian.org/debian bullseye/main armhf libharfbuzz0b armhf 2.7.4-1 [1427 kB] Get: 102 http://deb.debian.org/debian bullseye/main armhf gir1.2-harfbuzz-0.0 armhf 2.7.4-1 [1154 kB] Get: 103 http://deb.debian.org/debian bullseye/main armhf libfribidi0 armhf 1.0.8-2 [62.9 kB] Get: 104 http://deb.debian.org/debian bullseye/main armhf libthai-data all 0.1.28-3 [170 kB] Get: 105 http://deb.debian.org/debian bullseye/main armhf libdatrie1 armhf 0.2.13-1 [39.4 kB] Get: 106 http://deb.debian.org/debian bullseye/main armhf libthai0 armhf 0.1.28-3 [50.9 kB] Get: 107 http://deb.debian.org/debian bullseye/main armhf libpango-1.0-0 armhf 1.46.2-3 [173 kB] Get: 108 http://deb.debian.org/debian bullseye/main armhf libpixman-1-0 armhf 0.40.0-1 [466 kB] Get: 109 http://deb.debian.org/debian bullseye/main armhf libxcb-render0 armhf 1.14-3 [110 kB] Get: 110 http://deb.debian.org/debian bullseye/main armhf libxcb-shm0 armhf 1.14-3 [101 kB] Get: 111 http://deb.debian.org/debian bullseye/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB] Get: 112 http://deb.debian.org/debian bullseye/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB] Get: 113 http://deb.debian.org/debian bullseye/main armhf libcairo2 armhf 1.16.0-5 [615 kB] Get: 114 http://deb.debian.org/debian bullseye/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [56.1 kB] Get: 115 http://deb.debian.org/debian bullseye/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.8 kB] Get: 116 http://deb.debian.org/debian bullseye/main armhf libxft2 armhf 2.3.2-2 [50.1 kB] Get: 117 http://deb.debian.org/debian bullseye/main armhf libpangoxft-1.0-0 armhf 1.46.2-3 [41.0 kB] Get: 118 http://deb.debian.org/debian bullseye/main armhf gir1.2-pango-1.0 armhf 1.46.2-3 [53.0 kB] Get: 119 http://deb.debian.org/debian bullseye/main armhf libatk-bridge2.0-0 armhf 2.38.0-1 [56.9 kB] Get: 120 http://deb.debian.org/debian bullseye/main armhf libcairo-gobject2 armhf 1.16.0-5 [125 kB] Get: 121 http://deb.debian.org/debian bullseye/main armhf liblcms2-2 armhf 2.12~rc1-2 [123 kB] Get: 122 http://deb.debian.org/debian bullseye/main armhf libcolord2 armhf 1.4.5-3 [126 kB] Get: 123 http://deb.debian.org/debian bullseye/main armhf libavahi-common-data armhf 0.8-5 [123 kB] Get: 124 http://deb.debian.org/debian bullseye/main armhf libavahi-common3 armhf 0.8-5 [55.1 kB] Get: 125 http://deb.debian.org/debian bullseye/main armhf libavahi-client3 armhf 0.8-5 [58.5 kB] Get: 126 http://deb.debian.org/debian bullseye/main armhf libcups2 armhf 2.3.3op2-3+deb11u1 [317 kB] Get: 127 http://deb.debian.org/debian bullseye/main armhf libepoxy0 armhf 1.5.5-1 [170 kB] Get: 128 http://deb.debian.org/debian bullseye/main armhf libjson-glib-1.0-common all 1.6.2-1 [56.9 kB] Get: 129 http://deb.debian.org/debian bullseye/main armhf libjson-glib-1.0-0 armhf 1.6.2-1 [58.0 kB] Get: 130 http://deb.debian.org/debian bullseye/main armhf libproxy1v5 armhf 0.4.17-1 [54.4 kB] Get: 131 http://deb.debian.org/debian bullseye/main armhf glib-networking-common all 2.66.0-2 [68.1 kB] Get: 132 http://deb.debian.org/debian bullseye/main armhf glib-networking-services armhf 2.66.0-2 [16.9 kB] Get: 133 http://deb.debian.org/debian bullseye/main armhf gsettings-desktop-schemas all 3.38.0-2 [588 kB] Get: 134 http://deb.debian.org/debian bullseye/main armhf glib-networking armhf 2.66.0-2 [61.4 kB] Get: 135 http://deb.debian.org/debian bullseye/main armhf libpsl5 armhf 0.21.0-1.2 [56.1 kB] Get: 136 http://deb.debian.org/debian bullseye/main armhf libsoup2.4-1 armhf 2.72.0-2 [246 kB] Get: 137 http://deb.debian.org/debian bullseye/main armhf libsoup-gnome2.4-1 armhf 2.72.0-2 [21.7 kB] Get: 138 http://deb.debian.org/debian bullseye/main armhf librest-0.7-0 armhf 0.8.1-1.1 [28.7 kB] Get: 139 http://deb.debian.org/debian bullseye/main armhf libwayland-client0 armhf 1.18.0-2~exp1.1 [22.1 kB] Get: 140 http://deb.debian.org/debian bullseye/main armhf libwayland-cursor0 armhf 1.18.0-2~exp1.1 [13.5 kB] Get: 141 http://deb.debian.org/debian bullseye/main armhf libwayland-egl1 armhf 1.18.0-2~exp1.1 [8192 B] Get: 142 http://deb.debian.org/debian bullseye/main armhf libxcomposite1 armhf 1:0.4.5-1 [16.1 kB] Get: 143 http://deb.debian.org/debian bullseye/main armhf libxfixes3 armhf 1:5.0.3-2 [20.6 kB] Get: 144 http://deb.debian.org/debian bullseye/main armhf libxcursor1 armhf 1:1.2.0-2 [34.2 kB] Get: 145 http://deb.debian.org/debian bullseye/main armhf libxdamage1 armhf 1:1.1.5-2 [15.1 kB] Get: 146 http://deb.debian.org/debian bullseye/main armhf libxi6 armhf 2:1.7.10-1 [78.5 kB] Get: 147 http://deb.debian.org/debian bullseye/main armhf libxinerama1 armhf 2:1.1.4-2 [17.3 kB] Get: 148 http://deb.debian.org/debian bullseye/main armhf xkb-data all 2.29-2 [655 kB] Get: 149 http://deb.debian.org/debian bullseye/main armhf libxkbcommon0 armhf 1.0.3-2 [89.8 kB] Get: 150 http://deb.debian.org/debian bullseye/main armhf libxrandr2 armhf 2:1.5.1-1 [34.9 kB] Get: 151 http://deb.debian.org/debian bullseye/main armhf libgtk-3-common all 3.24.24-4 [3757 kB] Get: 152 http://deb.debian.org/debian bullseye/main armhf libgtk-3-0 armhf 3.24.24-4 [2338 kB] Get: 153 http://deb.debian.org/debian bullseye/main armhf gir1.2-gtk-3.0 armhf 3.24.24-4 [258 kB] Get: 154 http://deb.debian.org/debian bullseye/main armhf libvte-2.91-common armhf 0.62.3-1 [64.6 kB] Get: 155 http://deb.debian.org/debian bullseye/main armhf libvte-2.91-0 armhf 0.62.3-1 [178 kB] Get: 156 http://deb.debian.org/debian bullseye/main armhf gir1.2-vte-2.91 armhf 0.62.3-1 [28.1 kB] Get: 157 http://deb.debian.org/debian bullseye/main armhf hdf5-helpers armhf 1.10.6+repack-4 [40.4 kB] Get: 158 http://deb.debian.org/debian bullseye/main armhf icu-devtools armhf 67.1-7 [180 kB] Get: 159 http://deb.debian.org/debian bullseye/main armhf libaec0 armhf 1.0.4-1 [20.4 kB] Get: 160 http://deb.debian.org/debian bullseye/main armhf libsz2 armhf 1.0.4-1 [6616 B] Get: 161 http://deb.debian.org/debian bullseye/main armhf libaec-dev armhf 1.0.4-1 [18.3 kB] Get: 162 http://deb.debian.org/debian bullseye/main armhf pkg-config armhf 0.29.2-1 [62.4 kB] Get: 163 http://deb.debian.org/debian bullseye/main armhf libffi-dev armhf 3.3-6 [52.8 kB] Get: 164 http://deb.debian.org/debian bullseye/main armhf libglib2.0-data all 2.66.8-1 [1164 kB] Get: 165 http://deb.debian.org/debian bullseye/main armhf libglib2.0-bin armhf 2.66.8-1 [135 kB] Get: 166 http://deb.debian.org/debian bullseye/main armhf python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 167 http://deb.debian.org/debian bullseye/main armhf python3-distutils all 3.9.2-1 [143 kB] Get: 168 http://deb.debian.org/debian bullseye/main armhf libglib2.0-dev-bin armhf 2.66.8-1 [176 kB] Get: 169 http://deb.debian.org/debian bullseye/main armhf uuid-dev armhf 2.36.1-8 [97.9 kB] Get: 170 http://deb.debian.org/debian bullseye/main armhf libblkid-dev armhf 2.36.1-8 [217 kB] Get: 171 http://deb.debian.org/debian bullseye/main armhf libsepol1-dev armhf 3.1-1 [317 kB] Get: 172 http://deb.debian.org/debian bullseye/main armhf libpcre2-16-0 armhf 10.36-2 [197 kB] Get: 173 http://deb.debian.org/debian bullseye/main armhf libpcre2-32-0 armhf 10.36-2 [188 kB] Get: 174 http://deb.debian.org/debian bullseye/main armhf libpcre2-posix2 armhf 10.36-2 [48.5 kB] Get: 175 http://deb.debian.org/debian bullseye/main armhf libpcre2-dev armhf 10.36-2 [638 kB] Get: 176 http://deb.debian.org/debian bullseye/main armhf libselinux1-dev armhf 3.1-3 [163 kB] Get: 177 http://deb.debian.org/debian bullseye/main armhf libmount-dev armhf 2.36.1-8 [77.8 kB] Get: 178 http://deb.debian.org/debian bullseye/main armhf libpcre16-3 armhf 2:8.39-13 [239 kB] Get: 179 http://deb.debian.org/debian bullseye/main armhf libpcre32-3 armhf 2:8.39-13 [231 kB] Get: 180 http://deb.debian.org/debian bullseye/main armhf libpcrecpp0v5 armhf 2:8.39-13 [150 kB] Get: 181 http://deb.debian.org/debian bullseye/main armhf libpcre3-dev armhf 2:8.39-13 [587 kB] Get: 182 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get: 183 http://deb.debian.org/debian bullseye/main armhf libglib2.0-dev armhf 2.66.8-1 [1471 kB] Get: 184 http://deb.debian.org/debian bullseye/main armhf libatk1.0-dev armhf 2.36.0-2 [104 kB] Get: 185 http://deb.debian.org/debian bullseye/main armhf libdbus-1-dev armhf 1.12.20-2 [236 kB] Get: 186 http://deb.debian.org/debian bullseye/main armhf x11-common all 1:7.7+22 [252 kB] Get: 187 http://deb.debian.org/debian bullseye/main armhf libxtst6 armhf 2:1.2.3-1 [26.3 kB] Get: 188 http://deb.debian.org/debian bullseye/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 189 http://deb.debian.org/debian bullseye/main armhf x11proto-dev all 2020.1-1 [594 kB] Get: 190 http://deb.debian.org/debian bullseye/main armhf libxau-dev armhf 1:1.0.9-1 [22.4 kB] Get: 191 http://deb.debian.org/debian bullseye/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.7 kB] Get: 192 http://deb.debian.org/debian bullseye/main armhf xtrans-dev all 1.4.0-1 [98.7 kB] Get: 193 http://deb.debian.org/debian bullseye/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B] Get: 194 http://deb.debian.org/debian bullseye/main armhf libxcb1-dev armhf 1.14-3 [175 kB] Get: 195 http://deb.debian.org/debian bullseye/main armhf libx11-dev armhf 2:1.7.2-1 [785 kB] Get: 196 http://deb.debian.org/debian bullseye/main armhf x11proto-xext-dev all 2020.1-1 [3404 B] Get: 197 http://deb.debian.org/debian bullseye/main armhf libxext-dev armhf 2:1.3.3-1.1 [103 kB] Get: 198 http://deb.debian.org/debian bullseye/main armhf libxfixes-dev armhf 1:5.0.3-2 [22.9 kB] Get: 199 http://deb.debian.org/debian bullseye/main armhf x11proto-input-dev all 2020.1-1 [3412 B] Get: 200 http://deb.debian.org/debian bullseye/main armhf libxi-dev armhf 2:1.7.10-1 [236 kB] Get: 201 http://deb.debian.org/debian bullseye/main armhf x11proto-record-dev all 2020.1-1 [3408 B] Get: 202 http://deb.debian.org/debian bullseye/main armhf libxtst-dev armhf 2:1.2.3-1 [30.8 kB] Get: 203 http://deb.debian.org/debian bullseye/main armhf libatspi2.0-dev armhf 2.38.0-4 [74.5 kB] Get: 204 http://deb.debian.org/debian bullseye/main armhf libatk-bridge2.0-dev armhf 2.38.0-1 [9888 B] Get: 205 http://deb.debian.org/debian bullseye/main armhf libbrotli-dev armhf 1.0.9-2+b2 [270 kB] Get: 206 http://deb.debian.org/debian bullseye/main armhf liblzo2-2 armhf 2.10-2 [50.7 kB] Get: 207 http://deb.debian.org/debian bullseye/main armhf libcairo-script-interpreter2 armhf 1.16.0-5 [153 kB] Get: 208 http://deb.debian.org/debian bullseye/main armhf libexpat1-dev armhf 2.2.10-2 [123 kB] Get: 209 http://deb.debian.org/debian bullseye/main armhf libpng-dev armhf 1.6.37-3 [282 kB] Get: 210 http://deb.debian.org/debian bullseye/main armhf libfreetype-dev armhf 2.10.4+dfsg-1 [516 kB] Get: 211 http://deb.debian.org/debian bullseye/main armhf libfreetype6-dev armhf 2.10.4+dfsg-1 [82.4 kB] Get: 212 http://deb.debian.org/debian bullseye/main armhf libfontconfig-dev armhf 2.13.1-4.2 [353 kB] Get: 213 http://deb.debian.org/debian bullseye/main armhf libfontconfig1-dev armhf 2.13.1-4.2 [238 kB] Get: 214 http://deb.debian.org/debian bullseye/main armhf libxrender-dev armhf 1:0.9.10-1 [37.8 kB] Get: 215 http://deb.debian.org/debian bullseye/main armhf libice6 armhf 2:1.0.10-1 [51.9 kB] Get: 216 http://deb.debian.org/debian bullseye/main armhf libsm6 armhf 2:1.2.3-1 [33.0 kB] Get: 217 http://deb.debian.org/debian bullseye/main armhf libice-dev armhf 2:1.0.10-1 [61.9 kB] Get: 218 http://deb.debian.org/debian bullseye/main armhf libsm-dev armhf 2:1.2.3-1 [36.1 kB] Get: 219 http://deb.debian.org/debian bullseye/main armhf libpixman-1-dev armhf 0.40.0-1 [488 kB] Get: 220 http://deb.debian.org/debian bullseye/main armhf libxcb-render0-dev armhf 1.14-3 [114 kB] Get: 221 http://deb.debian.org/debian bullseye/main armhf libxcb-shm0-dev armhf 1.14-3 [103 kB] Get: 222 http://deb.debian.org/debian bullseye/main armhf libcairo2-dev armhf 1.16.0-5 [659 kB] Get: 223 http://deb.debian.org/debian bullseye/main armhf libhdf5-103-1 armhf 1.10.6+repack-4 [1178 kB] Get: 224 http://deb.debian.org/debian bullseye/main armhf libcbf1 armhf 0.9.6+dfsg1-2+b2 [311 kB] Get: 225 http://deb.debian.org/debian bullseye/main armhf libgfortran5 armhf 10.2.1-6 [237 kB] Get: 226 http://deb.debian.org/debian bullseye/main armhf libhdf5-fortran-102 armhf 1.10.6+repack-4 [94.0 kB] Get: 227 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-100 armhf 1.10.6+repack-4 [80.5 kB] Get: 228 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-fortran-100 armhf 1.10.6+repack-4 [51.2 kB] Get: 229 http://deb.debian.org/debian bullseye/main armhf libhdf5-cpp-103-1 armhf 1.10.6+repack-4 [133 kB] Get: 230 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-cpp-100 armhf 1.10.6+repack-4 [37.4 kB] Get: 231 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo-dev armhf 1:2.0.6-4 [242 kB] Get: 232 http://deb.debian.org/debian bullseye/main armhf libjpeg-dev armhf 1:2.0.6-4 [67.8 kB] Get: 233 http://deb.debian.org/debian bullseye/main armhf libhdf5-dev armhf 1.10.6+repack-4 [2444 kB] Get: 234 http://deb.debian.org/debian bullseye/main armhf libcbf-dev armhf 0.9.6+dfsg1-2+b2 [410 kB] Get: 235 http://deb.debian.org/debian bullseye/main armhf libcvector2 armhf 1.0.4.1-1+b1 [5360 B] Get: 236 http://deb.debian.org/debian bullseye/main armhf libcneartree7 armhf 5.1.1+dfsg1-1+b1 [21.7 kB] Get: 237 http://deb.debian.org/debian bullseye/main armhf libcneartree-dev armhf 5.1.1+dfsg1-1+b1 [74.8 kB] Get: 238 http://deb.debian.org/debian bullseye/main armhf libcqrlib2 armhf 1.1.4-1+b1 [11.4 kB] Get: 239 http://deb.debian.org/debian bullseye/main armhf libcqrlib-dev armhf 1.1.4-1+b1 [24.0 kB] Get: 240 http://deb.debian.org/debian bullseye/main armhf libcvector-dev armhf 1.0.4.1-1+b1 [9316 B] Get: 241 http://deb.debian.org/debian bullseye/main armhf libdatrie-dev armhf 0.2.13-1 [15.4 kB] Get: 242 http://deb.debian.org/debian bullseye/main armhf libdrm-common all 2.4.104-1 [14.9 kB] Get: 243 http://deb.debian.org/debian bullseye/main armhf libdrm2 armhf 2.4.104-1 [37.7 kB] Get: 244 http://deb.debian.org/debian bullseye/main armhf libdrm-amdgpu1 armhf 2.4.104-1 [27.1 kB] Get: 245 http://deb.debian.org/debian bullseye/main armhf libdrm-nouveau2 armhf 2.4.104-1 [24.6 kB] Get: 246 http://deb.debian.org/debian bullseye/main armhf libdrm-radeon1 armhf 2.4.104-1 [27.6 kB] Get: 247 http://deb.debian.org/debian bullseye/main armhf libedit2 armhf 3.1-20191231-2+b1 [81.1 kB] Get: 248 http://deb.debian.org/debian bullseye/main armhf libglvnd0 armhf 1.3.2-1 [51.8 kB] Get: 249 http://deb.debian.org/debian bullseye/main armhf libwayland-server0 armhf 1.18.0-2~exp1.1 [28.1 kB] Get: 250 http://deb.debian.org/debian bullseye/main armhf libgbm1 armhf 20.3.5-1 [70.1 kB] Get: 251 http://deb.debian.org/debian bullseye/main armhf libglapi-mesa armhf 20.3.5-1 [80.2 kB] Get: 252 http://deb.debian.org/debian bullseye/main armhf libx11-xcb1 armhf 2:1.7.2-1 [203 kB] Get: 253 http://deb.debian.org/debian bullseye/main armhf libxcb-dri2-0 armhf 1.14-3 [103 kB] Get: 254 http://deb.debian.org/debian bullseye/main armhf libxcb-dri3-0 armhf 1.14-3 [102 kB] Get: 255 http://deb.debian.org/debian bullseye/main armhf libxcb-present0 armhf 1.14-3 [101 kB] Get: 256 http://deb.debian.org/debian bullseye/main armhf libxcb-sync1 armhf 1.14-3 [104 kB] Get: 257 http://deb.debian.org/debian bullseye/main armhf libxcb-xfixes0 armhf 1.14-3 [105 kB] Get: 258 http://deb.debian.org/debian bullseye/main armhf libxshmfence1 armhf 1.3-1 [8592 B] Get: 259 http://deb.debian.org/debian bullseye/main armhf libegl-mesa0 armhf 20.3.5-1 [123 kB] Get: 260 http://deb.debian.org/debian bullseye/main armhf libegl1 armhf 1.3.2-1 [29.5 kB] Get: 261 http://deb.debian.org/debian bullseye/main armhf libxcb-glx0 armhf 1.14-3 [116 kB] Get: 262 http://deb.debian.org/debian bullseye/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.2 kB] Get: 263 http://deb.debian.org/debian bullseye/main armhf libz3-4 armhf 4.8.10-1 [5959 kB] Get: 264 http://deb.debian.org/debian bullseye/main armhf libllvm11 armhf 1:11.0.1-2 [15.4 MB] Get: 265 http://deb.debian.org/debian bullseye/main armhf libsensors-config all 1:3.6.0-7 [32.3 kB] Get: 266 http://deb.debian.org/debian bullseye/main armhf libsensors5 armhf 1:3.6.0-7 [49.6 kB] Get: 267 http://deb.debian.org/debian bullseye/main armhf libvulkan1 armhf 1.2.162.0-1 [84.3 kB] Get: 268 http://deb.debian.org/debian bullseye/main armhf libgl1-mesa-dri armhf 20.3.5-1 [6037 kB] Get: 269 http://deb.debian.org/debian bullseye/main armhf libglx-mesa0 armhf 20.3.5-1 [167 kB] Get: 270 http://deb.debian.org/debian bullseye/main armhf libglx0 armhf 1.3.2-1 [32.8 kB] Get: 271 http://deb.debian.org/debian bullseye/main armhf libgl1 armhf 1.3.2-1 [94.3 kB] Get: 272 http://deb.debian.org/debian bullseye/main armhf libglx-dev armhf 1.3.2-1 [16.3 kB] Get: 273 http://deb.debian.org/debian bullseye/main armhf libgl-dev armhf 1.3.2-1 [100 kB] Get: 274 http://deb.debian.org/debian bullseye/main armhf libegl-dev armhf 1.3.2-1 [19.6 kB] Get: 275 http://deb.debian.org/debian bullseye/main armhf libgles1 armhf 1.3.2-1 [12.6 kB] Get: 276 http://deb.debian.org/debian bullseye/main armhf libgles2 armhf 1.3.2-1 [18.2 kB] Get: 277 http://deb.debian.org/debian bullseye/main armhf libgles-dev armhf 1.3.2-1 [50.3 kB] Get: 278 http://deb.debian.org/debian bullseye/main armhf libopengl0 armhf 1.3.2-1 [32.7 kB] Get: 279 http://deb.debian.org/debian bullseye/main armhf libopengl-dev armhf 1.3.2-1 [5876 B] Get: 280 http://deb.debian.org/debian bullseye/main armhf libglvnd-dev armhf 1.3.2-1 [13.9 kB] Get: 281 http://deb.debian.org/debian bullseye/main armhf libegl1-mesa-dev armhf 20.3.5-1 [52.5 kB] Get: 282 http://deb.debian.org/debian bullseye/main armhf libepoxy-dev armhf 1.5.5-1 [127 kB] Get: 283 http://deb.debian.org/debian bullseye/main armhf libevent-2.1-7 armhf 2.1.12-stable-1 [169 kB] Get: 284 http://deb.debian.org/debian bullseye/main armhf libfribidi-dev armhf 1.0.8-2 [103 kB] Get: 285 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf2.0-bin armhf 2.42.2+dfsg-1 [24.6 kB] Get: 286 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf-2.0-dev armhf 2.42.2+dfsg-1 [56.7 kB] Get: 287 http://deb.debian.org/debian bullseye/main armhf libgmpxx4ldbl armhf 2:6.2.1+dfsg-1 [336 kB] Get: 288 http://deb.debian.org/debian bullseye/main armhf libgmp-dev armhf 2:6.2.1+dfsg-1 [593 kB] Get: 289 http://deb.debian.org/debian bullseye/main armhf libunbound8 armhf 1.13.1-1 [451 kB] Get: 290 http://deb.debian.org/debian bullseye/main armhf libgnutls-dane0 armhf 3.7.1-5 [391 kB] Get: 291 http://deb.debian.org/debian bullseye/main armhf libgnutls-openssl27 armhf 3.7.1-5 [390 kB] Get: 292 http://deb.debian.org/debian bullseye/main armhf libgnutlsxx28 armhf 3.7.1-5 [12.2 kB] Get: 293 http://deb.debian.org/debian bullseye/main armhf libidn2-dev armhf 2.3.0-5 [84.6 kB] Get: 294 http://deb.debian.org/debian bullseye/main armhf libp11-kit-dev armhf 0.23.22-1 [214 kB] Get: 295 http://deb.debian.org/debian bullseye/main armhf libtasn1-6-dev armhf 4.16.0-2 [99.4 kB] Get: 296 http://deb.debian.org/debian bullseye/main armhf nettle-dev armhf 3.7.3-1 [1267 kB] Get: 297 http://deb.debian.org/debian bullseye/main armhf libgnutls28-dev armhf 3.7.1-5 [1260 kB] Get: 298 http://deb.debian.org/debian bullseye/main armhf libgraphite2-dev armhf 1.3.14-1 [24.0 kB] Get: 299 http://deb.debian.org/debian bullseye/main armhf libharfbuzz-icu0 armhf 2.7.4-1 [1132 kB] Get: 300 http://deb.debian.org/debian bullseye/main armhf libharfbuzz-gobject0 armhf 2.7.4-1 [1145 kB] Get: 301 http://deb.debian.org/debian bullseye/main armhf libicu-dev armhf 67.1-7 [9343 kB] Get: 302 http://deb.debian.org/debian bullseye/main armhf libharfbuzz-dev armhf 2.7.4-1 [1588 kB] Get: 303 http://deb.debian.org/debian bullseye/main armhf libthai-dev armhf 0.1.28-3 [21.5 kB] Get: 304 http://deb.debian.org/debian bullseye/main armhf libxft-dev armhf 2.3.2-2 [62.3 kB] Get: 305 http://deb.debian.org/debian bullseye/main armhf pango1.0-tools armhf 1.46.2-3 [48.8 kB] Get: 306 http://deb.debian.org/debian bullseye/main armhf libpango1.0-dev armhf 1.46.2-3 [166 kB] Get: 307 http://deb.debian.org/debian bullseye/main armhf libwayland-bin armhf 1.18.0-2~exp1.1 [20.6 kB] Get: 308 http://deb.debian.org/debian bullseye/main armhf libwayland-dev armhf 1.18.0-2~exp1.1 [69.0 kB] Get: 309 http://deb.debian.org/debian bullseye/main armhf libxcomposite-dev armhf 1:0.4.5-1 [19.8 kB] Get: 310 http://deb.debian.org/debian bullseye/main armhf libxcursor-dev armhf 1:1.2.0-2 [42.2 kB] Get: 311 http://deb.debian.org/debian bullseye/main armhf libxdamage-dev armhf 1:1.1.5-2 [15.0 kB] Get: 312 http://deb.debian.org/debian bullseye/main armhf x11proto-xinerama-dev all 2020.1-1 [3408 B] Get: 313 http://deb.debian.org/debian bullseye/main armhf libxinerama-dev armhf 2:1.1.4-2 [19.8 kB] Get: 314 http://deb.debian.org/debian bullseye/main armhf libxkbcommon-dev armhf 1.0.3-2 [49.4 kB] Get: 315 http://deb.debian.org/debian bullseye/main armhf x11proto-randr-dev all 2020.1-1 [3412 B] Get: 316 http://deb.debian.org/debian bullseye/main armhf libxrandr-dev armhf 2:1.5.1-1 [43.0 kB] Get: 317 http://deb.debian.org/debian bullseye/main armhf wayland-protocols all 1.20-1 [60.5 kB] Get: 318 http://deb.debian.org/debian bullseye/main armhf libgtk-3-dev armhf 3.24.24-4 [1144 kB] Get: 319 http://deb.debian.org/debian bullseye/main armhf libvte-2.91-dev armhf 0.62.3-1 [55.9 kB] Get: 320 http://deb.debian.org/debian bullseye/main armhf xutils-dev armhf 1:7.7+5+b1 [239 kB] Fetched 132 MB in 13s (10.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-libapparmor1_2.13.6-10_armhf.deb ... Unpacking libapparmor1:armhf (2.13.6-10) ... Selecting previously unselected package libcap2:armhf. Preparing to unpack .../01-libcap2_1%3a2.44-1_armhf.deb ... Unpacking libcap2:armhf (1:2.44-1) ... Selecting previously unselected package libargon2-1:armhf. 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Selecting previously unselected package libxkbcommon-dev:armhf. Preparing to unpack .../283-libxkbcommon-dev_1.0.3-2_armhf.deb ... Unpacking libxkbcommon-dev:armhf (1.0.3-2) ... Selecting previously unselected package x11proto-randr-dev. Preparing to unpack .../284-x11proto-randr-dev_2020.1-1_all.deb ... Unpacking x11proto-randr-dev (2020.1-1) ... Selecting previously unselected package libxrandr-dev:armhf. Preparing to unpack .../285-libxrandr-dev_2%3a1.5.1-1_armhf.deb ... Unpacking libxrandr-dev:armhf (2:1.5.1-1) ... Selecting previously unselected package wayland-protocols. Preparing to unpack .../286-wayland-protocols_1.20-1_all.deb ... Unpacking wayland-protocols (1.20-1) ... Selecting previously unselected package libgtk-3-dev:armhf. Preparing to unpack .../287-libgtk-3-dev_3.24.24-4_armhf.deb ... Unpacking libgtk-3-dev:armhf (3.24.24-4) ... Selecting previously unselected package libvte-2.91-dev:armhf. Preparing to unpack .../288-libvte-2.91-dev_0.62.3-1_armhf.deb ... Unpacking libvte-2.91-dev:armhf (0.62.3-1) ... Selecting previously unselected package xutils-dev. Preparing to unpack .../289-xutils-dev_1%3a7.7+5+b1_armhf.deb ... Unpacking xutils-dev (1:7.7+5+b1) ... Setting up media-types (4.0.0) ... Setting up libpcrecpp0v5:armhf (2:8.39-13) ... Setting up libpipeline1:armhf (1.5.3-1) ... Setting up libgraphite2-3:armhf (1.3.14-1) ... Setting up liblcms2-2:armhf (2.12~rc1-2) ... Setting up libpixman-1-0:armhf (0.40.0-1) ... Setting up libwayland-server0:armhf (1.18.0-2~exp1.1) ... Setting up systemd-sysv (247.3-6) ... Setting up libxau6:armhf (1:1.0.9-1) ... Setting up libproxy1v5:armhf (0.4.17-1) ... Setting up libpsl5:armhf (0.21.0-1.2) ... Setting up libgnutls-openssl27:armhf (3.7.1-5) ... Setting up libpixman-1-dev:armhf (0.40.0-1) ... Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libpcre16-3:armhf (2:8.39-13) ... Setting up hdf5-helpers (1.10.6+repack-4) ... Setting up hicolor-icon-theme (0.17-2) ... Setting up libvte-2.91-common (0.62.3-1) ... Setting up libicu67:armhf (67.1-7) ... Setting up libdatrie1:armhf (0.2.13-1) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.66.8-1) ... Setting up libglvnd0:armhf (1.3.2-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:armhf (1.0.9-2+b2) ... Setting up libgdk-pixbuf2.0-common (2.42.2+dfsg-1) ... Setting up x11-common (1:7.7+22) ... Running in chroot, ignoring request. Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-7) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up libsepol1-dev:armhf (3.1-1) ... Setting up libdeflate0:armhf (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up xkb-data (2.29-2) ... Setting up liblzo2-2:armhf (2.10-2) ... Setting up file (1:5.39-3) ... Setting up libcvector2:armhf (1.0.4.1-1+b1) ... Setting up libffi-dev:armhf (3.3-6) ... Setting up libpthread-stubs0-dev:armhf (0.4-1) ... Setting up libjbig0:armhf (2.1-3.1+b2) ... Setting up libpcre2-16-0:armhf (10.36-2) ... Setting up libaec0:armhf (1.0.4-1) ... Setting up libcolord2:armhf (1.4.5-3) ... Setting up libopengl0:armhf (1.3.2-1) ... Setting up libdconf1:armhf (0.38.0-2) ... Setting up xtrans-dev (1.4.0-1) ... Setting up libgraphite2-dev:armhf (1.3.14-1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libz3-4:armhf (4.8.10-1) ... Setting up libpcre2-32-0:armhf (10.36-2) ... Setting up libglib2.0-data (2.66.8-1) ... Setting up libgmpxx4ldbl:armhf (2:6.2.1+dfsg-1) ... Setting up libgles2:armhf (1.3.2-1) ... Setting up libexpat1-dev:armhf (2.2.10-2) ... Setting up libjpeg62-turbo:armhf (1:2.0.6-4) ... Setting up libx11-data (2:1.7.2-1) ... Setting up libjpeg62-turbo-dev:armhf (1:2.0.6-4) ... Setting up libepoxy0:armhf (1.5.5-1) ... Setting up libcneartree7:armhf (5.1.1+dfsg1-1+b1) ... Setting up bash-completion (1:2.11-2) ... Setting up uuid-dev:armhf (2.36.1-8) ... Setting up libavahi-common-data:armhf (0.8-5) ... Setting up libgles1:armhf (1.3.2-1) ... Setting up libdbus-1-3:armhf (1.12.20-2) ... Setting up dbus (1.12.20-2) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libsigsegv2:armhf (2.13-1) ... Setting up libfribidi0:armhf (1.0.8-2) ... Setting up libpng16-16:armhf (1.6.37-3) ... Setting up libpcre32-3:armhf (2:8.39-13) ... Setting up libevent-2.1-7:armhf (2.1.12-stable-1) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:armhf (0.6.1-2.1) ... Setting up icu-devtools (67.1-7) ... Setting up pkg-config (0.29.2-1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libcqrlib2:armhf (1.1.4-1+b1) ... Setting up libgnutlsxx28:armhf (3.7.1-5) ... Setting up libpcre2-posix2:armhf (10.36-2) ... Setting up libsensors5:armhf (1:3.6.0-7) ... 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Setting up libtiff5:armhf (4.2.0-1) ... Setting up libwayland-egl1:armhf (1.18.0-2~exp1.1) ... Setting up libopengl-dev:armhf (1.3.2-1) ... Setting up glib-networking-common (2.66.0-2) ... Setting up libtasn1-6-dev:armhf (4.16.0-2) ... Setting up libbsd0:armhf (0.11.3-1) ... Setting up libdrm-common (2.4.104-1) ... Setting up libelf1:armhf (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libicu-dev:armhf (67.1-7) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up libbrotli-dev:armhf (1.0.9-2+b2) ... Setting up libp11-kit-dev:armhf (0.23.22-1) ... Setting up libsz2:armhf (1.0.4-1) ... Setting up libxkbcommon0:armhf (1.0.3-2) ... Setting up libwayland-client0:armhf (1.18.0-2~exp1.1) ... Setting up x11proto-dev (2020.1-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up glib-networking-services (2.66.0-2) ... Setting up libblkid-dev:armhf (2.36.1-8) ... Setting up libice6:armhf (2:1.0.10-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libxcb1:armhf (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libgmp-dev:armhf (2:6.2.1+dfsg-1) ... Setting up libxcb-xfixes0:armhf (1.14-3) ... Setting up libxau-dev:armhf (1:1.0.9-1) ... Setting up libpcre2-dev:armhf (10.36-2) ... Setting up nettle-dev:armhf (3.7.3-1) ... Setting up libice-dev:armhf (2:1.0.10-1) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:armhf (1.14-3) ... Setting up libselinux1-dev:armhf (3.1-3) ... Setting up libpcre3-dev:armhf (2:8.39-13) ... Setting up libcvector-dev:armhf (1.0.4.1-1+b1) ... Setting up x11proto-randr-dev (2020.1-1) ... Setting up libfribidi-dev:armhf (1.0.8-2) ... Setting up libxcb-glx0:armhf (1.14-3) ... Setting up libxkbcommon-dev:armhf (1.0.3-2) ... Setting up libedit2:armhf (3.1-20191231-2+b1) ... Setting up libreadline8:armhf (8.1-1) ... Setting up libpng-dev:armhf (1.6.37-3) ... Setting up libaec-dev:armhf (1.0.4-1) ... Setting up libavahi-common3:armhf (0.8-5) ... Setting up libjpeg-dev:armhf (1:2.0.6-4) ... Setting up libglib2.0-bin (2.66.8-1) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:armhf (1.14-3) ... Setting up x11proto-xinerama-dev (2020.1-1) ... Setting up libjson-glib-1.0-0:armhf (1.6.2-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxcb-present0:armhf (1.14-3) ... Setting up libthai0:armhf (0.1.28-3) ... Setting up dbus-user-session (1.12.20-2) ... Setting up libxdmcp-dev:armhf (1:1.1.2-3) ... Setting up libwayland-bin (1.18.0-2~exp1.1) ... Setting up libunbound8:armhf (1.13.1-1) ... Setting up libllvm11:armhf (1:11.0.1-2) ... Setting up libcqrlib-dev:armhf (1.1.4-1+b1) ... Setting up libfreetype6:armhf (2.10.4+dfsg-1) ... Setting up libdbus-1-dev:armhf (1.12.20-2) ... Setting up libxcb-sync1:armhf (1.14-3) ... Setting up shared-mime-info (2.0-1) ... Setting up x11proto-input-dev (2020.1-1) ... Setting up ucf (3.0043) ... Setting up gir1.2-glib-2.0:armhf (1.66.1-1+b1) ... Setting up autoconf (2.69-14) ... Setting up libthai-dev:armhf (0.1.28-3) ... Setting up libxcb-dri2-0:armhf (1.14-3) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up x11proto-xext-dev (2020.1-1) ... Setting up libdrm2:armhf (2.4.104-1) ... Setting up libhdf5-103-1:armhf (1.10.6+repack-4) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libwayland-cursor0:armhf (1.18.0-2~exp1.1) ... Setting up libhdf5-cpp-103-1:armhf (1.10.6+repack-4) ... Setting up libx11-6:armhf (2:1.7.2-1) ... Setting up libharfbuzz0b:armhf (2.7.4-1) ... Setting up libgdk-pixbuf-2.0-0:armhf (2.42.2+dfsg-1) ... Setting up x11proto-record-dev (2020.1-1) ... Setting up libxcomposite1:armhf (1:0.4.5-1) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up libavahi-client3:armhf (0.8-5) ... Setting up libmount-dev:armhf (2.36.1-8) ... Setting up libpython3.9-stdlib:armhf (3.9.2-1) ... Setting up libpython3-stdlib:armhf (3.9.2-3) ... Setting up libdrm-amdgpu1:armhf (2.4.104-1) ... Setting up libhdf5-hl-100:armhf (1.10.6+repack-4) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:armhf (1.14-3) ... Setting up gtk-update-icon-cache (3.24.24-4) ... Setting up libx11-xcb1:armhf (2:1.7.2-1) ... Setting up libgnutls-dane0:armhf (3.7.1-5) ... Setting up libdrm-nouveau2:armhf (2.4.104-1) ... Setting up gir1.2-freedesktop:armhf (1.66.1-1+b1) ... Setting up libharfbuzz-icu0:armhf (2.7.4-1) ... Setting up libxdamage1:armhf (1:1.1.5-2) ... Setting up libxcb1-dev:armhf (1.14-3) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up gir1.2-gdkpixbuf-2.0:armhf (2.42.2+dfsg-1) ... Setting up libgbm1:armhf (20.3.5-1) ... Setting up gir1.2-atk-1.0:armhf (2.36.0-2) ... Setting up libsm-dev:armhf (2:1.2.3-1) ... Setting up libdrm-radeon1:armhf (2.4.104-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libgl1-mesa-dri:armhf (20.3.5-1) ... Setting up libx11-dev:armhf (2:1.7.2-1) ... Setting up libxext6:armhf (2:1.3.3-1.1) ... Setting up dconf-service (0.38.0-2) ... Setting up libharfbuzz-gobject0:armhf (2.7.4-1) ... Setting up libatspi2.0-0:armhf (2.38.0-4) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer. Setting up libwayland-dev:armhf (1.18.0-2~exp1.1) ... Setting up gir1.2-harfbuzz-0.0:armhf (2.7.4-1) ... Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ... Setting up libfreetype-dev:armhf (2.10.4+dfsg-1) ... Setting up libcbf1:armhf (0.9.6+dfsg1-2+b2) ... Setting up dh-autoreconf (20) ... Setting up libatk-bridge2.0-0:armhf (2.38.0-1) ... Setting up libxcb-shm0-dev:armhf (1.14-3) ... Setting up libegl-mesa0:armhf (20.3.5-1) ... Setting up libhdf5-hl-cpp-100:armhf (1.10.6+repack-4) ... Setting up adwaita-icon-theme (3.38.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libxfixes3:armhf (1:5.0.3-2) ... Setting up libxinerama1:armhf (2:1.1.4-2) ... Setting up libxrandr2:armhf (2:1.5.1-1) ... Setting up libhdf5-fortran-102:armhf (1.10.6+repack-4) ... Setting up libxcb-render0-dev:armhf (1.14-3) ... Setting up libxext-dev:armhf (2:1.3.3-1.1) ... Setting up libcups2:armhf (2.3.3op2-3+deb11u1) ... Setting up libgdk-pixbuf2.0-bin (2.42.2+dfsg-1) ... Setting up libegl1:armhf (1.3.2-1) ... Setting up libhdf5-hl-fortran-100:armhf (1.10.6+repack-4) ... Setting up libfontconfig1:armhf (2.13.1-4.2) ... Setting up libxrender-dev:armhf (1:0.9.10-1) ... Setting up python3.9 (3.9.2-1) ... Setting up libgnutls28-dev:armhf (3.7.1-5) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libxft2:armhf (2.3.2-2) ... Setting up libglx-mesa0:armhf (20.3.5-1) ... Setting up libxi6:armhf (2:1.7.10-1) ... Setting up libglx0:armhf (1.3.2-1) ... Setting up dconf-gsettings-backend:armhf (0.38.0-2) ... Setting up libxtst6:armhf (2:1.2.3-1) ... Setting up libxcursor1:armhf (1:1.2.0-2) ... Setting up libpango-1.0-0:armhf (1.46.2-3) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up gir1.2-atspi-2.0:armhf (2.38.0-4) ... Setting up libcairo2:armhf (1.16.0-5) ... Setting up libfreetype6-dev:armhf (2.10.4+dfsg-1) ... Setting up libxfixes-dev:armhf (1:5.0.3-2) ... Setting up libxrandr-dev:armhf (2:1.5.1-1) ... Setting up libgl1:armhf (1.3.2-1) ... Setting up libhdf5-dev (1.10.6+repack-4) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libxinerama-dev:armhf (2:1.1.4-2) ... Setting up libglx-dev:armhf (1.3.2-1) ... Setting up libcairo-gobject2:armhf (1.16.0-5) ... Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ... Setting up libxi-dev:armhf (2:1.7.10-1) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up libgl-dev:armhf (1.3.2-1) ... Setting up libgtk-3-common (3.24.24-4) ... Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ... Setting up libxtst-dev:armhf (2:1.2.3-1) ... Setting up python3-distutils (3.9.2-1) ... Setting up libxdamage-dev:armhf (1:1.1.5-2) ... Setting up libcairo-script-interpreter2:armhf (1.16.0-5) ... Setting up gsettings-desktop-schemas (3.38.0-2) ... Setting up libglib2.0-dev-bin (2.66.8-1) ... Setting up libpangoxft-1.0-0:armhf (1.46.2-3) ... Setting up libegl-dev:armhf (1.3.2-1) ... Setting up libfontconfig-dev:armhf (2.13.1-4.2) ... Setting up libxcomposite-dev:armhf (1:0.4.5-1) ... Setting up libxcursor-dev:armhf (1:1.2.0-2) ... Setting up libepoxy-dev:armhf (1.5.5-1) ... Setting up pango1.0-tools (1.46.2-3) ... Setting up gir1.2-pango-1.0:armhf (1.46.2-3) ... Setting up libglib2.0-dev:armhf (2.66.8-1) ... Setting up libcbf-dev:armhf (0.9.6+dfsg1-2+b2) ... Setting up libcairo2-dev:armhf (1.16.0-5) ... Setting up glib-networking:armhf (2.66.0-2) ... Setting up libgles-dev:armhf (1.3.2-1) ... Setting up libatk1.0-dev:armhf (2.36.0-2) ... Setting up libxft-dev:armhf (2.3.2-2) ... Setting up libgdk-pixbuf-2.0-dev:armhf (2.42.2+dfsg-1) ... Setting up libatspi2.0-dev:armhf (2.38.0-4) ... Setting up libharfbuzz-dev:armhf (2.7.4-1) ... Setting up libfontconfig1-dev:armhf (2.13.1-4.2) ... Setting up libsoup2.4-1:armhf (2.72.0-2) ... Setting up libglvnd-dev:armhf (1.3.2-1) ... Setting up libatk-bridge2.0-dev:armhf (2.38.0-1) ... Setting up libpango1.0-dev:armhf (1.46.2-3) ... Setting up libsoup-gnome2.4-1:armhf (2.72.0-2) ... Setting up libegl1-mesa-dev:armhf (20.3.5-1) ... Setting up librest-0.7-0:armhf (0.8.1-1.1) ... Setting up libgtk-3-0:armhf (3.24.24-4) ... Setting up gir1.2-gtk-3.0:armhf (3.24.24-4) ... Setting up libvte-2.91-0:armhf (0.62.3-1) ... Setting up gir1.2-vte-2.91:armhf (0.62.3-1) ... Setting up libgtk-3-dev:armhf (3.24.24-4) ... Setting up libvte-2.91-dev:armhf (0.62.3-1) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/rasmol-2.7.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../rasmol_2.7.6.0-2_source.changes dpkg-buildpackage: info: source package rasmol dpkg-buildpackage: info: source version 2.7.6.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh_testdir dh_testroot if [ -f src/Makefile ] ; then /usr/bin/make -C src distclean ; fi rm -f src/rasmol-gtk src/rasmol.32 src/rasmol.16 src/rasmol.8 rm -f src/gtkui.h rm -f manualA4.pdf refcardA4.pdf rm -f x11-stamp dh clean dh_clean debian/rules binary dh_testdir rm -f x11-stamp cd /build/rasmol-2.7.6.0/src ; xmkmf '-DGTKWIN -DGTK3 -Uvector' ; cd /build/rasmol-2.7.6.0 imake -DGTKWIN -DGTK3 -Uvector -DUseInstalled -I/usr/lib/X11/config /usr/bin/make -C src clean; make[1]: Entering directory '/build/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' /usr/bin/make -C src make[1]: Entering directory '/build/rasmol-2.7.6.0/src' mkdir -p -v ../external_packages mkdir: created directory '../external_packages' gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from rasmol.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne.part.0': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:26: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:867, from outfile.c:191: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1293:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1297:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1296:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1299:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1308:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1356:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1419:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1423:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1437:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1540:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1591:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1565:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1546:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1551:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1557:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1556:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1643:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1653:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1681:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1715:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1727:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1963:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1971:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1973:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1975:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1980:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1841:12, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1896:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1895:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1905:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1848:17, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1857:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2085:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2095:10: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadPDBMolecule' at infile.c:1081:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadPDBMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from cif_stx.c:227: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output truncated writing between 28 and 2147483645 bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ In file included from /usr/include/stdio.h:867, from multiple.c:252: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 32 and 2147483650 bytes into a destination of size 29 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from langsel_unix.c:114: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from maps.c:83: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from rmsd.c:38: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ echo "/* Automatically generated GTK ui definitions, do not edit! */" > gtkui.h echo >> gtkui.h echo "const gchar *actionmenu_str = \"\\" >> gtkui.h cat actionmenu.gtk | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *sizechooser_str = \"\\" >> gtkui.h gtk-builder-convert -w sizechooser.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: 1: gtk-builder-convert: not found echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *print_resolution_str = \"\\" >> gtkui.h gtk-builder-convert -w printing-resolution.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: 1: gtk-builder-convert: not found echo "\";" >> gtkui.h echo >> gtkui.h gdk-pixbuf-csource --name=rasmol_icon --struct rasmol_48x48.xpm >> gtkui.h gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gtkwin.o gtkwin.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from gtkwin.c:81: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from /usr/include/glib-2.0/glib.h:62, from /usr/include/vte-2.91/vte/vte.h:22, from gtkwin.c:87: gtkwin.c: In function 'build_exportdialog': gtkwin.c:555:19: warning: too many arguments for format [-Wformat-extra-args] 555 | g_message("building size chooser failed: s", err->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:334:32: note: in definition of macro 'g_message' 334 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'build_gtkmenu': gtkwin.c:1297:19: warning: too many arguments for format [-Wformat-extra-args] 1297 | g_message("building menus failed: s", error->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:334:32: note: in definition of macro 'g_message' 334 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'UpdateGtkMoleculeList': gtkwin.c:1233:32: warning: '%d' directive output may be truncated writing between 1 and 10 bytes into a region of size 3 [-Wformat-truncation=] 1233 | snprintf(itemname, 3, "%d", i); | ^~ gtkwin.c:1233:31: note: directive argument in the range [0, 2147483647] 1233 | snprintf(itemname, 3, "%d", i); | ^~~~ In file included from /usr/include/stdio.h:867, from gtkwin.c:82: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 3 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -pthread -I/usr/include/vte-2.91 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o eggfileformatchooser.o eggfileformatchooser.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/limits.h:195, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/syslimits.h:7, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/limits.h:34, from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11, from /usr/include/glib-2.0/glib/gtypes.h:32, from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/gtk-3.0/gdk/gdkconfig.h:13, from /usr/include/gtk-3.0/gdk/gdk.h:30, from /usr/include/gtk-3.0/gtk/gtk.h:30, from eggfileformatchooser.h:22, from eggfileformatchooser.c:19: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ eggfileformatchooser.c: In function 'egg_file_format_chooser_init': eggfileformatchooser.c:344:13: warning: Deprecated pre-processor symbol, replace with 344 | EggFileFormatChooserPrivate); | ^ ~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o gtkwin.o eggfileformatchooser.o -lm -lXext -lX11 -lvte-2.91 -lgio-2.0 -lgtk-3 -lpango-1.0 -lcairo -lgdk_pixbuf-2.0 -lgobject-2.0 -lglib-2.0 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree ln -s ../doc/rasmol.1 rasmol.man rm -f rasmol._man if test -z "true" ; then \ cd `dirname rasmol` && \ ln -s `basename rasmol.man` `basename rasmol._man`; \ else \ cpp -undef -traditional -D__apploaddir__=/etc/X11/app-defaults -D__filemansuffix__=5x -D__osfilemansuffix__=5 -D__libmansuffix__=3x -D__oslibmansuffix__=3 -D__mansuffix__=1x -D__osmansuffix__=1 -D__syscallmansuffix__=2x -D__ossysmansuffix__=2 -D__gamemansuffix__=6x -D__osgamemansuffix__=6 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__admmansuffix__=8x -D__osadmmansuffix__=8 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__drivermansuffix__=4x -D__osdrivermansuffix__=4 -D__adminmansuffix__=8 -D__projectroot__=/usr -D__xconfigfile__=xorg.conf -D__xconfigdir__=/usr/lib/X11 -D__xlogfile__=Xorg -D__xservername__=Xorg -D__appmansuffix__=1x -D__xorgversion__="\"`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'`\" \"X Version 11\"" -D__vendorversion__="`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'` X.Org" \ < rasmol.man | sed -e '/^# *[0-9][0-9]* *.*$/d' -e '/^#line *[0-9][0-9]* *.*$/d' -e '/^[ ]*XCOMM$/s/XCOMM/#/' -e '/^[ ]*XCOMM[^a-zA-Z0-9_]/s/XCOMM/#/' -e '/^[ ]*XHASH/s/XHASH/#/' -e '/\@\@$/s/\@\@$/\\/' >rasmol._man; \ fi make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol-gtk cd /build/rasmol-2.7.6.0/src ; xmkmf '-DX11WIN -Uvector' ; cd /build/rasmol-2.7.6.0 mv -f Makefile Makefile.bak imake -DX11WIN -Uvector -DUseInstalled -I/usr/lib/X11/config In file included from /usr/lib/X11/config/Imake.tmpl:2293, from Imakefile.c:34: /tmp/IIf.7yPKen:125: warning: "X11WIN" redefined 125 | #define X11WIN | :3: note: this is the location of the previous definition touch x11-stamp dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DEIGHTBIT=1 rasmol make[1]: Entering directory '/build/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from rasmol.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne.part.0': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:26: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:867, from outfile.c:191: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1293:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1297:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1296:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1299:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1308:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1356:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1419:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1423:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1437:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1540:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1591:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1565:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1546:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1551:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1557:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1556:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1643:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1653:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1681:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1715:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1727:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1963:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1971:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1973:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1975:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1980:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1841:12, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1896:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1895:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1905:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1848:17, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1857:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2085:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2095:10: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadPDBMolecule' at infile.c:1081:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadPDBMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from cif_stx.c:227: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output truncated writing between 28 and 2147483645 bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ In file included from /usr/include/stdio.h:867, from multiple.c:252: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 32 and 2147483650 bytes into a destination of size 29 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from langsel_unix.c:114: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from maps.c:83: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from rmsd.c:38: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from x11win.c:235: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from x11win.c:237: In function 'strncpy', inlined from 'RasOpenFonts' at x11win.c:813:9: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin___strncpy_chk' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c: In function 'RasOpenFonts': x11win.c:811:29: note: length computed here 811 | if (!MenuFont && (kl=strlen(menufonts))> 0 ) { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from x11win.c:237: In function 'strncpy', inlined from 'RasOpenFonts' at x11win.c:831:9: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin___strncpy_chk' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c: In function 'RasOpenFonts': x11win.c:829:29: note: length computed here 829 | if (!MenuFont && (kl=strlen(menufonts))> 0) { | ^~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.8 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DSIXTEENBIT=1 rasmol make[1]: Entering directory '/build/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from rasmol.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne.part.0': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:26: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:867, from outfile.c:191: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1293:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1297:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1296:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1299:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1308:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1356:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1419:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1423:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1437:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1540:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1591:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1565:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1546:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1551:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1557:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1556:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1643:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1653:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1681:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1715:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1727:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1963:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1971:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1973:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1975:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1980:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1841:12, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1896:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1895:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1905:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1848:17, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1857:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2085:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2095:10: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadPDBMolecule' at infile.c:1081:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadPDBMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from cif_stx.c:227: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output truncated writing between 28 and 2147483645 bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ In file included from /usr/include/stdio.h:867, from multiple.c:252: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 32 and 2147483650 bytes into a destination of size 29 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from langsel_unix.c:114: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from maps.c:83: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from rmsd.c:38: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from x11win.c:235: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from x11win.c:237: In function 'strncpy', inlined from 'RasOpenFonts' at x11win.c:813:9: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin___strncpy_chk' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c: In function 'RasOpenFonts': x11win.c:811:29: note: length computed here 811 | if (!MenuFont && (kl=strlen(menufonts))> 0 ) { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from x11win.c:237: In function 'strncpy', inlined from 'RasOpenFonts' at x11win.c:831:9: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin___strncpy_chk' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c: In function 'RasOpenFonts': x11win.c:829:29: note: length computed here 829 | if (!MenuFont && (kl=strlen(menufonts))> 0) { | ^~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.16 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DTHIRTYTWOBIT=1 rasmol make[1]: Entering directory '/build/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from rasmol.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne.part.0': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from command.c:118: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:26: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:867, from outfile.c:191: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1293:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1297:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1296:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1299:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1308:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMDLMolecule' at infile.c:1356:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMDLMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1419:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1423:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadXYZMolecule' at infile.c:1437:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadXYZMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1540:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1591:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1565:18: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1546:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1551:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1557:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMol2Molecule' at infile.c:1556:13: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMol2Molecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1643:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1653:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadAlchemyMolecule' at infile.c:1681:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadAlchemyMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1715:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadCharmmMolecule' at infile.c:1727:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadCharmmMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1963:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1971:9: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1973:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1975:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMOPACMolecule' at infile.c:1980:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1841:12, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1896:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1895:13, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1905:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1848:17, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'ReadMOPACOutputFile' at infile.c:1857:20, inlined from 'LoadMOPACMolecule' at infile.c:1967:17: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMOPACMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2085:5: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadMacroModelMolecule' at infile.c:2095:10: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadMacroModelMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ In function 'FetchRecord', inlined from 'LoadPDBMolecule' at infile.c:1081:12: infile.c:335:26: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 335 | buffer[MAXBUFFLEN] = 0; | ~~~~~~~~~~~~~~~~~~~^~~ infile.c: In function 'LoadPDBMolecule': infile.c:295:19: note: at offset 256 to object 'Record' with size 256 declared here 295 | static char __far Record[256]; | ^~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from cif_stx.c:227: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output truncated writing between 28 and 2147483645 bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ In file included from /usr/include/stdio.h:867, from multiple.c:252: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 32 and 2147483650 bytes into a destination of size 29 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/arm-linux-gnueabihf/10/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from langsel_unix.c:114: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from maps.c:83: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from rmsd.c:38: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Dlinux -D__arm__ -D__arm32__ -U__arm -Uarm -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33, from /usr/include/stdlib.h:25, from x11win.c:235: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from x11win.c:237: In function 'strncpy', inlined from 'RasOpenFonts' at x11win.c:813:9: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin___strncpy_chk' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c: In function 'RasOpenFonts': x11win.c:811:29: note: length computed here 811 | if (!MenuFont && (kl=strlen(menufonts))> 0 ) { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from x11win.c:237: In function 'strncpy', inlined from 'RasOpenFonts' at x11win.c:831:9: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin___strncpy_chk' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x11win.c: In function 'RasOpenFonts': x11win.c:829:29: note: length computed here 829 | if (!MenuFont && (kl=strlen(menufonts))> 0) { | ^~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from x11win.c:238: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/build/rasmol-2.7.6.0/src=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.32 dh binary-arch --with bash-completion debian/rules build-arch make[1]: Entering directory '/build/rasmol-2.7.6.0' make[1]: Nothing to be done for 'build-arch'. make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_prep -a debian/rules override_dh_install make[1]: Entering directory '/build/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_installdocs -a debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_installman -a dh_bash-completion -a dh_installmime -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'rasmol-dbgsym' in '../rasmol-dbgsym_2.7.6.0-2_armhf.deb'. dpkg-deb: building package 'rasmol' in '../rasmol_2.7.6.0-2_armhf.deb'. dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf dh binary-indep debian/rules build-indep make[1]: Entering directory '/build/rasmol-2.7.6.0' dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_prep -i debian/rules override_dh_install make[1]: Entering directory '/build/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_installdocs -i debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_installman -i dh_perl -i dh_link -i dh_strip_nondeterminism -i debian/rules override_dh_compress make[1]: Entering directory '/build/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/rasmol-2.7.6.0' dh_fixperms -i dh_missing -i dh_installdeb -i dh_gencontrol -i dh_md5sums -i dh_builddeb -i dpkg-deb: building package 'rasmol-doc' in '../rasmol-doc_2.7.6.0-2_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../rasmol_2.7.6.0-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/7545 and its subdirectories I: Current time: Thu Sep 23 16:57:04 -12 2021 I: pbuilder-time-stamp: 1632459424 Fri Sep 24 04:57:17 UTC 2021 I: 1st build successful. Starting 2nd build on remote node jtx1c-armhf-rb.debian.net. Fri Sep 24 04:57:17 UTC 2021 I: Preparing to do remote build '2' on jtx1c-armhf-rb.debian.net. Fri Sep 24 05:06:10 UTC 2021 I: Deleting $TMPDIR on jtx1c-armhf-rb.debian.net. Fri Sep 24 05:06:12 UTC 2021 I: rasmol_2.7.6.0-2_armhf.changes: Format: 1.8 Date: Mon, 30 Nov 2020 15:38:48 +0100 Source: rasmol Binary: rasmol rasmol-dbgsym rasmol-doc Architecture: armhf all Version: 2.7.6.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andreas Tille Description: rasmol - visualization of biological macromolecules rasmol-doc - documentation for rasmol Changes: rasmol (2.7.6.0-2) unstable; urgency=medium . * Team upload. * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Update renamed lintian tag names in lintian overrides. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright). Checksums-Sha1: da74ecbd59b5e3a3745ddf97decca97da2890725 2816464 rasmol-dbgsym_2.7.6.0-2_armhf.deb 04aa63a56fd5c5ff4551ffee6b23b7a9cad76e6c 1251700 rasmol-doc_2.7.6.0-2_all.deb faecb778f864c01b8797c30dea6947035e2187dd 14051 rasmol_2.7.6.0-2_armhf.buildinfo 54f3af8015280fb932a5412a4446be18bbf3caaf 679696 rasmol_2.7.6.0-2_armhf.deb Checksums-Sha256: e06328d0b6e12315d078fe3b408b3970aa06b912223fcf291512b6f85f11f39b 2816464 rasmol-dbgsym_2.7.6.0-2_armhf.deb 8d67f7de789e74e0e7740f18922d7651f9fe51110d9aee649780fcf10d35a2f4 1251700 rasmol-doc_2.7.6.0-2_all.deb 0232d102200b24de031fb339ca005750896efb958e020fc0101ead93e439ee49 14051 rasmol_2.7.6.0-2_armhf.buildinfo ef1385fce132f5a961e056ed36c5cf8f65ad7a29d1e3b436b13728229e620013 679696 rasmol_2.7.6.0-2_armhf.deb Files: 8e14aff4270a145e9672561e18a8d608 2816464 debug optional rasmol-dbgsym_2.7.6.0-2_armhf.deb 72bf0b399af97dacc47c8e4e152c8e67 1251700 doc optional rasmol-doc_2.7.6.0-2_all.deb 9242418ce01eea3011513948419c0193 14051 science optional rasmol_2.7.6.0-2_armhf.buildinfo fcf17f909016082f45d3486a019a1b4f 679696 science optional rasmol_2.7.6.0-2_armhf.deb Fri Sep 24 05:06:14 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.0KrkyyXH3h/rasmol_2.7.6.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.0KrkyyXH3h/rasmol_2.7.6.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.0KrkyyXH3h/rasmol_2.7.6.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.0KrkyyXH3h/b1/rasmol_2.7.6.0-2_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.0KrkyyXH3h/b2/rasmol_2.7.6.0-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.352s) 0.352s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.072s) 0.072s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Fri Sep 24 05:06:15 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Fri Sep 24 05:06:15 UTC 2021 I: rasmol from bullseye built successfully and reproducibly on armhf. Fri Sep 24 05:06:16 UTC 2021 I: Submitting .buildinfo files to external archives: Fri Sep 24 05:06:16 UTC 2021 I: Submitting 16K b1/rasmol_2.7.6.0-2_armhf.buildinfo.asc Fri Sep 24 05:06:17 UTC 2021 I: Submitting 16K b2/rasmol_2.7.6.0-2_armhf.buildinfo.asc Fri Sep 24 05:06:18 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Sep 24 05:06:18 UTC 2021 I: Done submitting .buildinfo files. Fri Sep 24 05:06:18 UTC 2021 I: Removing signed rasmol_2.7.6.0-2_armhf.buildinfo.asc files: removed './b1/rasmol_2.7.6.0-2_armhf.buildinfo.asc' removed './b2/rasmol_2.7.6.0-2_armhf.buildinfo.asc'