Wed Jul 28 04:42:05 UTC 2021 I: starting to build miniasm/bullseye/armhf on jenkins on '2021-07-28 04:41' Wed Jul 28 04:42:05 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_14/2924/console.log Wed Jul 28 04:42:05 UTC 2021 I: Downloading source for bullseye/miniasm=0.3+dfsg-2 --2021-07-28 04:42:06-- http://cdn-fastly.deb.debian.org/debian/pool/main/m/miniasm/miniasm_0.3+dfsg-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1996 (1.9K) Saving to: ‘miniasm_0.3+dfsg-2.dsc’ 0K . 100% 271M=0s 2021-07-28 04:42:06 (271 MB/s) - ‘miniasm_0.3+dfsg-2.dsc’ saved [1996/1996] Wed Jul 28 04:42:06 UTC 2021 I: miniasm_0.3+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: miniasm Binary: miniasm Architecture: any Version: 0.3+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss Homepage: https://github.com/lh3/miniasm Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/miniasm Vcs-Git: https://salsa.debian.org/med-team/miniasm.git Testsuite: autopkgtest Testsuite-Triggers: genometools, minimap Build-Depends: debhelper-compat (= 12), zlib1g-dev Package-List: miniasm deb science optional arch=any Checksums-Sha1: d2d277c4b1be7e88fd552f34362857a283326253 40055 miniasm_0.3+dfsg.orig.tar.gz b38a780518661b3acc3c8e1dc3c819fc6fb46297 80220 miniasm_0.3+dfsg-2.debian.tar.xz Checksums-Sha256: 365f6f6c439807842da08b9d66957312a431c888c873bd0d5042f593e4c2d988 40055 miniasm_0.3+dfsg.orig.tar.gz ff9f8134fa775c1a035cce143e29b76c52f6bdfd170c3a7fb9273ff006678b2c 80220 miniasm_0.3+dfsg-2.debian.tar.xz Files: d9ca2e08b0f941a1828474ae6fa90bde 40055 miniasm_0.3+dfsg.orig.tar.gz 161eba37701eaf9fc27a74be4ba901cf 80220 miniasm_0.3+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEWzS6WqtVB+kDQm6F6NN64vCfSHIFAl6a6ZUACgkQ6NN64vCf SHIBWw/6Alpa1aXHmJKQ4eFFwEJtaD6XInLwAZ5C0fqglbfxWjlVq87bHx1xTC8l aJpfaCXySgUjitJ35p0+yliIT7KVNesIsskn4l51oVkRXoneIPzCuD7ZCo2iAO9/ 15s5+xN1Rg5KHWzSUj3nCoIc/pNxNf3Cg6fDhjgSt/4drg8r+o1AmaVU7s23EJK/ 6akERit9e7lNp9iNNvtk0PSmT+j2Ix64AlSTx1dnh+Rx1ElUBadkEtJhGj9FUWxQ k5vUpwvf8njDzMPC7t+iEVIrL0S1yyLtX74Em/ny2dPlOXvS5CxSQnIKZCpfaLGH P79J60XzU25AMFl4MPE1CX8NgBTndM8cV/zywwzPr9VQo7dmmUdOD3btvJ8JVHdb epfLvE+uG9dxOVTRA2OisMyqESZ/U5LEmrMFVrXboUsYGZ79tiSRaI4GnlGNcXVV nOP6zK1pVA5r9D1dnPD5+hMlrzsCDhUUSKPMxCIIN3O7yddx0eDFKZ8GcmnWz4mF d9iSb2f9vsnzXLQ+z2yzx81zJRG1fzy9fnWwH360TC7BZ4oKG1nMOjUirqruwiEW vjRV0ZhHtqL3kWMiNsUnJ6UarTV7KOG/rl35GXewVaUQUqnDiYWEp8rtOH0qo0Kq evQ8Q/4AMYukLRcDHqDRMdxRiQpqmF+KRl9Pdq5r9JPtCajRmkI= =fnOl -----END PGP SIGNATURE----- Wed Jul 28 04:42:06 UTC 2021 I: Checking whether the package is not for us Wed Jul 28 04:42:06 UTC 2021 I: Starting 1st build on remote node virt32a-armhf-rb.debian.net. Wed Jul 28 04:42:06 UTC 2021 I: Preparing to do remote build '1' on virt32a-armhf-rb.debian.net. Wed Jul 28 04:43:58 UTC 2021 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jul 27 16:42:13 -12 2021 I: pbuilder-time-stamp: 1627447333 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [miniasm_0.3+dfsg-2.dsc] I: copying [./miniasm_0.3+dfsg.orig.tar.gz] I: copying [./miniasm_0.3+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.40VVKAfq/trustedkeys.kbx': General error gpgv: Signature made Fri Apr 17 23:50:45 2020 -12 gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./miniasm_0.3+dfsg-2.dsc dpkg-source: info: extracting miniasm in miniasm-0.3+dfsg dpkg-source: info: unpacking miniasm_0.3+dfsg.orig.tar.gz dpkg-source: info: unpacking miniasm_0.3+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying ensure_64bit_value dpkg-source: info: applying hardening dpkg-source: info: applying spelling I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/29507/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='a0755eb1950a4e27994c0a9aee2b9fb5' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='29507' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.umHVVEat21/pbuilderrc_ALLd --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.umHVVEat21/b1 --logfile b1/build.log miniasm_0.3+dfsg-2.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux virt32a 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-2 (2021-07-20) armv7l GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 25 21:24 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/29507/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 17.9 MB of archives. After unpacking 63.5 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Fetched 17.9 MB in 2s (7891 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../07-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_armhf.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_armhf.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../10-libsigsegv2_2.13-1_armhf.deb ... Unpacking libsigsegv2:armhf (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_armhf.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../23-libelf1_0.183-1_armhf.deb ... Unpacking libelf1:armhf (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.13+20210201-1_armhf.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:armhf. Preparing to unpack .../25-libicu67_67.1-7_armhf.deb ... Unpacking libicu67:armhf (67.1-7) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../26-libxml2_2.9.10+dfsg-6.7_armhf.deb ... Unpacking libxml2:armhf (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-4_armhf.deb ... Unpacking gettext (0.21-4) ... 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Setting up libmagic1:armhf (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:armhf (0.183-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/miniasm-0.3+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../miniasm_0.3+dfsg-2_source.changes dpkg-buildpackage: info: source package miniasm dpkg-buildpackage: info: source version 0.3+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/miniasm-0.3+dfsg' rm -fr gmon.out *.o a.out miniasm minidot *~ *.a *.dSYM session* make[1]: Leaving directory '/build/miniasm-0.3+dfsg' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/miniasm-0.3+dfsg' gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. sys.c -o sys.o gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. sdict.c -o sdict.o gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. paf.c -o paf.o gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. asg.c -o asg.o gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. common.c -o common.o gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. hit.c -o hit.o gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. asm.c -o asm.o hit.c: In function 'ma_hit_read': hit.c:103:59: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 103 | if (ma_verbose >= 3) fprintf(stderr, "[M::%s::%s] read %ld hits; stored %ld hits and %d sequences (%ld bp)\n", __func__, sys_timestamp(), tot, h.n, d->n_seq, tot_len); | ~~^ ~~~ | | | | long int size_t {aka unsigned int} | %d hit.c:103:76: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 103 | if (ma_verbose >= 3) fprintf(stderr, "[M::%s::%s] read %ld hits; stored %ld hits and %d sequences (%ld bp)\n", __func__, sys_timestamp(), tot, h.n, d->n_seq, tot_len); | ~~^ ~~~ | | | | long int size_t {aka unsigned int} | %d hit.c:103:103: warning: format '%ld' expects argument of type 'long int', but argument 8 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 103 | if (ma_verbose >= 3) fprintf(stderr, "[M::%s::%s] read %ld hits; stored %ld hits and %d sequences (%ld bp)\n", __func__, sys_timestamp(), tot, h.n, d->n_seq, tot_len); | ~~^ ~~~~~~~ | | | | long int size_t {aka unsigned int} | %d hit.c: In function 'ma_hit_sub': hit.c:158:34: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 158 | fprintf(stderr, "[M::%s::%s] %ld query sequences remain after sub\n", __func__, sys_timestamp(), n_remained); | ~~^ ~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d hit.c: In function 'ma_hit_cut': hit.c:191:34: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 191 | fprintf(stderr, "[M::%s::%s] %ld hits remain after cut\n", __func__, sys_timestamp(), m); | ~~^ ~ | | | | long int size_t {aka unsigned int} | %d hit.c: In function 'ma_hit_flt': hit.c:214:34: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 214 | fprintf(stderr, "[M::%s::%s] %ld hits remain after filtering; crude coverage after filtering: %.2f\n", __func__, sys_timestamp(), m, *cov); | ~~^ ~ | | | | long int size_t {aka unsigned int} | %d hit.c: In function 'ma_hit_contained': hit.c:254:51: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 254 | fprintf(stderr, "[M::%s::%s] %d sequences and %ld hits remain after containment removal\n", __func__, sys_timestamp(), d->n_seq, m); | ~~^ ~ | | | | long int size_t {aka unsigned int} | %d gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. main.c -o main.o gcc -c -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I. dotter.c -o dotter.o gcc -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat sys.o sdict.o paf.o asg.o common.o hit.o asm.o main.o -o miniasm -lm -lz -lpthread -Wl,-z,relro -Wl,-z,now gcc -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/miniasm-0.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat paf.o sdict.o dotter.o -o minidot -lm -lz -lpthread -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/build/miniasm-0.3+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/miniasm/usr/bin/miniasm was not linked against libpthread.so.0 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'miniasm' in '../miniasm_0.3+dfsg-2_armhf.deb'. dpkg-deb: building package 'miniasm-dbgsym' in '../miniasm-dbgsym_0.3+dfsg-2_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../miniasm_0.3+dfsg-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/29507 and its subdirectories I: Current time: Tue Jul 27 16:43:53 -12 2021 I: pbuilder-time-stamp: 1627447433 Wed Jul 28 04:44:00 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ff64a-armhf-rb.debian.net. Wed Jul 28 04:44:00 UTC 2021 I: Preparing to do remote build '2' on ff64a-armhf-rb.debian.net. Wed Jul 28 04:46:22 UTC 2021 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. Wed Jul 28 04:46:25 UTC 2021 I: miniasm_0.3+dfsg-2_armhf.changes: Format: 1.8 Date: Sat, 18 Apr 2020 12:24:47 +0200 Source: miniasm Binary: miniasm miniasm-dbgsym Architecture: armhf Version: 0.3+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sascha Steinbiss Description: miniasm - ultrafast de novo assembler for long noisy DNA sequencing reads Changes: miniasm (0.3+dfsg-2) unstable; urgency=medium . * Fix EDAM syntax (thanks Andreas Tille). * Add conda reference (thanks Steffen Moeller). * Use debhelper-compat 12. * Bump Standards-Version. * Add missing DEP-12 fields. Checksums-Sha1: c7d989261e3afa8cd455b60218a99d0fee0478ca 59252 miniasm-dbgsym_0.3+dfsg-2_armhf.deb 0896909971a067e64b9b2251a417c405d5585d57 4799 miniasm_0.3+dfsg-2_armhf.buildinfo 286b52953e0981ac968c67d4e73fc806526b456b 26576 miniasm_0.3+dfsg-2_armhf.deb Checksums-Sha256: c14e037e14684ba816eaad0b94ce10061e3d341831365d7262f0323648ce3126 59252 miniasm-dbgsym_0.3+dfsg-2_armhf.deb 70cd5672099884f01bdb511cdaff01be0b8f14f28e2a387798ae77e3f4aa8f5e 4799 miniasm_0.3+dfsg-2_armhf.buildinfo d37644c172049546727ba23b50919c582d3ff52fdb633c790b492dc95434084b 26576 miniasm_0.3+dfsg-2_armhf.deb Files: 97666b2bd822efcf3df6958edcd27f56 59252 debug optional miniasm-dbgsym_0.3+dfsg-2_armhf.deb 75ded192b4ecac98807a4462899bc85d 4799 science optional miniasm_0.3+dfsg-2_armhf.buildinfo 9f7fca180308fbd29ddc4ddce775403d 26576 science optional miniasm_0.3+dfsg-2_armhf.deb Wed Jul 28 04:46:26 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.umHVVEat21/miniasm_0.3+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.umHVVEat21/miniasm_0.3+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.umHVVEat21/miniasm_0.3+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.umHVVEat21/b1/miniasm_0.3+dfsg-2_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.umHVVEat21/b2/miniasm_0.3+dfsg-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.255s) 0.255s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Wed Jul 28 04:46:27 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Wed Jul 28 04:46:28 UTC 2021 I: miniasm from bullseye built successfully and reproducibly on armhf. Wed Jul 28 04:46:32 UTC 2021 I: Submitting .buildinfo files to external archives: Wed Jul 28 04:46:33 UTC 2021 I: Submitting 8.0K b1/miniasm_0.3+dfsg-2_armhf.buildinfo.asc Wed Jul 28 04:46:33 UTC 2021 I: Submitting 8.0K b2/miniasm_0.3+dfsg-2_armhf.buildinfo.asc Wed Jul 28 04:46:34 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Jul 28 04:46:34 UTC 2021 I: Done submitting .buildinfo files. Wed Jul 28 04:46:34 UTC 2021 I: Removing signed miniasm_0.3+dfsg-2_armhf.buildinfo.asc files: removed './b1/miniasm_0.3+dfsg-2_armhf.buildinfo.asc' removed './b2/miniasm_0.3+dfsg-2_armhf.buildinfo.asc'