Wed Jul 21 08:47:51 UTC 2021 I: starting to build libtabixpp/bullseye/armhf on jenkins on '2021-07-21 08:47' Wed Jul 21 08:47:51 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_30/9367/console.log Wed Jul 21 08:47:51 UTC 2021 I: Downloading source for bullseye/libtabixpp=1.1.0-4 --2021-07-21 08:47:51-- http://cdn-fastly.deb.debian.org/debian/pool/main/libt/libtabixpp/libtabixpp_1.1.0-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2137 (2.1K) Saving to: ‘libtabixpp_1.1.0-4.dsc’ 0K .. 100% 167M=0s 2021-07-21 08:47:51 (167 MB/s) - ‘libtabixpp_1.1.0-4.dsc’ saved [2137/2137] Wed Jul 21 08:47:51 UTC 2021 I: libtabixpp_1.1.0-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libtabixpp Binary: libtabixpp0, libtabixpp-dev Architecture: any Version: 1.1.0-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Sascha Steinbiss Homepage: https://github.com/ekg/tabixpp Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/libtabixpp Vcs-Git: https://salsa.debian.org/med-team/libtabixpp.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, tabix Build-Depends: debhelper-compat (= 13), libhts-dev, zlib1g-dev, libbz2-dev, d-shlibs Package-List: libtabixpp-dev deb libdevel optional arch=any libtabixpp0 deb libs optional arch=any Checksums-Sha1: c0865cc97055335ff0cd8ce07b8cb625b27de2fe 3741 libtabixpp_1.1.0.orig.tar.gz c040496743865d069c87ca81c130188acfaa2798 47600 libtabixpp_1.1.0-4.debian.tar.xz Checksums-Sha256: 56c8f1b07190aba5e1d0b738e380e726d380f0ad8b2d0df133200b0ab1f8ed88 3741 libtabixpp_1.1.0.orig.tar.gz 32d294442d8b990ac50c420e503f6e359fb08b5afeaa055513122f279256680d 47600 libtabixpp_1.1.0-4.debian.tar.xz Files: fc2f1a32854e74a0500604bd14beb6f2 3741 libtabixpp_1.1.0.orig.tar.gz b5e8861411c37bcac91912c419cffee4 47600 libtabixpp_1.1.0-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmASp0sACgkQPCZ2P2xn 5uKKJxAAlYm1757Mrxu7nlXFqYLFwdGcqOC1AzcfvNGrTztafgTK8RWzwWKqQVpd wDpFgyw4E7OTTSAtQX2WsqoU2OMYDhkTNvK2RQZohYIM3P6CJCFQLr8Tx/j7ZHOs N1kUM2GJQ7xq1E9nMudLzqC7yzyCWwqJHz5puZK/e+V5uoKnJn+k5AOH6GCUO43/ e2XQ6wrokhL8Z3TXHDzPwQtx4NLeCaTLc8SXxxcTL178K0XYWXv0fH63uV9JRZ2Z cd4GN7hb+LW5vhamXMh9aAG37s3rOh79lwzOz2Ur02p0JK4lhiReJDZfJcVO3mPC VMFvAOPCwpdKeT5x+8Jq1dS9v1kixfx67cE8YXNSJjktfVAfHm9s9dSzA/4QFTdX u/4CJDcbMVLJd1lPFG3f+4tS6GXpbBPpuQn/UrWWQTtVH1PyRulC0H1w78dgr0mg E+LR6ixYeDoml+vsG5hzjMZ/ZZAaEz1IO+tZpvayIQ2D+uKE+KTL6KQPVpx3PZH2 tFgDzq2vtmO8zfI43fUMDNv2m37vpnfcFgOwZpyPvDNxNKLx0hQ2YVDQb05FWTzJ ByQFrsaWXo7RMLRau33utEAUKuRq1B41TFFsljcArE8F/EjHYoO0DaDZaObThwYr J6rKLP9lCUU9X4CweA6zB4bLWJ9Oz0rH0ur6qyaGVudhifJJGwc= =9x+x -----END PGP SIGNATURE----- Wed Jul 21 08:47:51 UTC 2021 I: Checking whether the package is not for us Wed Jul 21 08:47:51 UTC 2021 I: Starting 1st build on remote node ff64a-armhf-rb.debian.net. Wed Jul 21 08:47:51 UTC 2021 I: Preparing to do remote build '1' on ff64a-armhf-rb.debian.net. Wed Jul 21 08:50:18 UTC 2021 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jul 20 20:48:00 -12 2021 I: pbuilder-time-stamp: 1626857280 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libtabixpp_1.1.0-4.dsc] I: copying [./libtabixpp_1.1.0.orig.tar.gz] I: copying [./libtabixpp_1.1.0-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.AGVmkzAd/trustedkeys.kbx': General error gpgv: Signature made Thu Jan 28 00:00:11 2021 -12 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libtabixpp_1.1.0-4.dsc dpkg-source: info: extracting libtabixpp in libtabixpp-1.1.0 dpkg-source: info: unpacking libtabixpp_1.1.0.orig.tar.gz dpkg-source: info: unpacking libtabixpp_1.1.0-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build_shared_lib_with_debian_htslib.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3445/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=5' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='cade4ab60e0f49ef842fe11202988395' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3445' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.JjCvoTy4oX/pbuilderrc_tc4A --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.JjCvoTy4oX/b1 --logfile b1/build.log libtabixpp_1.1.0-4.dsc' SUDO_GID='114' SUDO_UID='109' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux ff64a 5.10.0-7-arm64 #1 SMP Debian 5.10.40-1 (2021-05-28) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 19 21:26 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/3445/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libhts-dev, zlib1g-dev, libbz2-dev, d-shlibs dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libhts-dev; however: Package libhts-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libbz2-dev{a} libcurl3-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libelf1{a} libfile-stripnondeterminism-perl{a} libhts-dev{a} libhts3{a} libicu67{a} libldap-2.4-2{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 49 newly installed, 0 to remove and 0 not upgraded. Need to get 24.0 MB of archives. After unpacking 73.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf d-shlibs all 0.98 [17.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libbz2-dev armhf 1.0.8-4 [29.2 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2.1 [67.6 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf libsasl2-2 armhf 2.1.27+dfsg-2.1 [99.1 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libldap-2.4-2 armhf 2.4.57+dfsg-3 [210 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libnghttp2-14 armhf 1.43.0-1 [65.6 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libpsl5 armhf 0.21.0-1.2 [56.1 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libssh2-1 armhf 1.9.0-2 [143 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf libcurl3-gnutls armhf 7.74.0-1.3+b1 [306 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf libcurl4-gnutls-dev armhf 7.74.0-1.3+b1 [402 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf libdeflate0 armhf 1.7-1 [43.1 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf libdeflate-dev armhf 1.7-1 [39.9 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libhts3 armhf 1.11-4 [332 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf liblzma-dev armhf 5.2.5-2 [220 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf libhts-dev armhf 1.11-4 [3819 kB] Fetched 24.0 MB in 2s (10.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../07-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_armhf.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. 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Setting up libbrotli1:armhf (1.0.9-2+b2) ... Setting up libnghttp2-14:armhf (1.43.0-1) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up libdeflate0:armhf (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up d-shlibs (0.98) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2.1) ... Setting up liblzma-dev:armhf (5.2.5-2) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:armhf (1.9.0-2) ... Setting up libdeflate-dev:armhf (1.7-1) ... Setting up libelf1:armhf (0.183-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up libbz2-dev:armhf (1.0.8-4) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libldap-2.4-2:armhf (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up libcurl3-gnutls:armhf (7.74.0-1.3+b1) ... Setting up libcurl4-gnutls-dev:armhf (7.74.0-1.3+b1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libhts3:armhf (1.11-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhts-dev:armhf (1.11-4) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/libtabixpp-1.1.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libtabixpp_1.1.0-4_source.changes dpkg-buildpackage: info: source package libtabixpp dpkg-buildpackage: info: source version 1.1.0-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libtabixpp-1.1.0' dh_auto_clean || /bin/true make -j5 clean make[2]: Entering directory '/build/libtabixpp-1.1.0' rm -fr gmon.out *.o a.out *.dSYM tabix++ *~ *.a tabix.aux tabix.log \ tabix.pdf *.class libtabix*.dylib libtabix*so* make[2]: Leaving directory '/build/libtabixpp-1.1.0' make[1]: Leaving directory '/build/libtabixpp-1.1.0' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j5 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/libtabixpp-1.1.0' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libtabixpp-1.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c tabix.cpp -Ihtslib tabix.cpp: In constructor 'Tabix::Tabix(std::string&)': tabix.cpp:15:32: warning: 'int bgzf_is_bgzf(const char*)' is deprecated: Use bgzf_compression() or hts_detect_format() instead [-Wdeprecated-declarations] 15 | if ( bgzf_is_bgzf(cfilename)!=1 ) | ^ In file included from tabix.hpp:4, from tabix.cpp:1: /usr/include/htslib/bgzf.h:263:9: note: declared here 263 | int bgzf_is_bgzf(const char *fn) HTS_DEPRECATED("Use bgzf_compression() or hts_detect_format() instead"); | ^~~~~~~~~~~~ g++ -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libtabixpp-1.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -o tabix++ main.cpp tabix.o -Ihtslib -L. -Lhtslib -lhts -lpthread -lm -lbz2 -llzma -lz g++ -shared -o libtabixpp.so.0 tabix.o -fPIC -Wl,-soname,libtabixpp.so.0 -Wl,-z,relro -Wl,-z,now -lhts ar rcs libtabixpp.a tabix.o make[1]: Leaving directory '/build/libtabixpp-1.1.0' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/libtabixpp-1.1.0' ln -s libtabixpp.so.* libtabixpp.so d-shlibmove --commit \ --multiarch \ --devunversioned \ --override s/libhts[12]-dev/libhts-dev/ \ --movedev "*.hpp" usr/include/ \ libtabixpp.so Library package automatic movement utility --> libhts-dev package exists. set -e install -d -m 755 debian/libtabixpp-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libtabixpp0/usr/lib/arm-linux-gnueabihf mv ./libtabixpp.a debian/libtabixpp-dev/usr/lib/arm-linux-gnueabihf mv ./libtabixpp.la debian/libtabixpp-dev/usr/lib/arm-linux-gnueabihf || true mv ./libtabixpp.so debian/libtabixpp-dev/usr/lib/arm-linux-gnueabihf mv /build/libtabixpp-1.1.0/libtabixpp.so.0 debian/libtabixpp0/usr/lib/arm-linux-gnueabihf PKGDEV=libtabixpp-dev PKGSHL=libtabixpp0 install -d -m 755 debian/libtabixpp-dev/usr/include/ mv *.hpp debian/libtabixpp-dev/usr/include/ mv: cannot stat './libtabixpp.la': No such file or directory make[1]: Leaving directory '/build/libtabixpp-1.1.0' dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libtabixpp0/DEBIAN/symbols doesn't match completely debian/libtabixpp0.symbols --- debian/libtabixpp0.symbols (libtabixpp0_1.1.0-4_armhf) +++ dpkg-gensymbols9ug0r0 2021-07-20 20:49:52.296884045 -1200 @@ -11,4 +11,5 @@ _ZN5TabixC2Ev@Base 1.0.0 _ZN5TabixD1Ev@Base 1.0.0 _ZN5TabixD2Ev@Base 1.0.0 + _ZNKSt5ctypeIcE8do_widenEc@Base 1.1.0-4 _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base 1.0.0 dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libtabixpp0/usr/lib/arm-linux-gnueabihf/libtabixpp.so.0 found in none of the libraries dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libtabixpp0' in '../libtabixpp0_1.1.0-4_armhf.deb'. dpkg-deb: building package 'libtabixpp0-dbgsym' in '../libtabixpp0-dbgsym_1.1.0-4_armhf.deb'. dpkg-deb: building package 'libtabixpp-dev' in '../libtabixpp-dev_1.1.0-4_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libtabixpp_1.1.0-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3445 and its subdirectories I: Current time: Tue Jul 20 20:50:10 -12 2021 I: pbuilder-time-stamp: 1626857410 Wed Jul 21 08:50:22 UTC 2021 I: 1st build successful. Starting 2nd build on remote node virt32c-armhf-rb.debian.net. Wed Jul 21 08:50:22 UTC 2021 I: Preparing to do remote build '2' on virt32c-armhf-rb.debian.net. Wed Jul 21 08:54:14 UTC 2021 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. Wed Jul 21 08:54:17 UTC 2021 I: libtabixpp_1.1.0-4_armhf.changes: Format: 1.8 Date: Thu, 28 Jan 2021 12:53:36 +0100 Source: libtabixpp Binary: libtabixpp-dev libtabixpp0 libtabixpp0-dbgsym Architecture: armhf Version: 1.1.0-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libtabixpp-dev - C++ wrapper to tabix indexer (development files) libtabixpp0 - C++ wrapper to tabix indexer Changes: libtabixpp (1.1.0-4) unstable; urgency=medium . * Team upload. * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Update watch file format version to 4. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. Checksums-Sha1: db60f23a28e3b0bef821bd95ddf9efe08a17440c 8024 libtabixpp-dev_1.1.0-4_armhf.deb f1406cd37a53fdcd07af217c5efaa99838e0edc9 57964 libtabixpp0-dbgsym_1.1.0-4_armhf.deb 2a09c569819cf8e6fba04fd873de5c5093777188 8516 libtabixpp0_1.1.0-4_armhf.deb b5c510b10fff2e37a14b68bcacbcb0b495c1e4a9 6004 libtabixpp_1.1.0-4_armhf.buildinfo Checksums-Sha256: 37755b0f71fd7543d4912cb1a0869be244b68139579a3db44104a927f93f41e5 8024 libtabixpp-dev_1.1.0-4_armhf.deb 63b8434765978a6c0358a923915c92762d9e6d81899b5ae107f2aa17e7bef89e 57964 libtabixpp0-dbgsym_1.1.0-4_armhf.deb 0f70b185cc5079a2f59c68412de9593f3467bcac057eb7514710c4b68fed9cd5 8516 libtabixpp0_1.1.0-4_armhf.deb 7317293298c789c1eba7eb45ccc466acf680beb6d74cab12c711a5aad1ba924e 6004 libtabixpp_1.1.0-4_armhf.buildinfo Files: b36535f5eeafbe1c8f3c91b3d9ec9f7c 8024 libdevel optional libtabixpp-dev_1.1.0-4_armhf.deb 001b85ac528a870d9e45c9232feb9c7a 57964 debug optional libtabixpp0-dbgsym_1.1.0-4_armhf.deb beceb08b7a46d1821186fe6ecc28b1f3 8516 libs optional libtabixpp0_1.1.0-4_armhf.deb 91f2a8ae4603777bcab41df02bfe45d1 6004 science optional libtabixpp_1.1.0-4_armhf.buildinfo Wed Jul 21 08:54:18 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.JjCvoTy4oX/libtabixpp_1.1.0-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.JjCvoTy4oX/libtabixpp_1.1.0-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.JjCvoTy4oX/libtabixpp_1.1.0-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.JjCvoTy4oX/b1/libtabixpp_1.1.0-4_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.JjCvoTy4oX/b2/libtabixpp_1.1.0-4_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.258s) 0.258s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.018s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Wed Jul 21 08:54:19 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Wed Jul 21 08:54:19 UTC 2021 I: libtabixpp from bullseye built successfully and reproducibly on armhf. Wed Jul 21 08:54:20 UTC 2021 I: Submitting .buildinfo files to external archives: Wed Jul 21 08:54:20 UTC 2021 I: Submitting 8.0K b1/libtabixpp_1.1.0-4_armhf.buildinfo.asc Wed Jul 21 08:54:21 UTC 2021 I: Submitting 8.0K b2/libtabixpp_1.1.0-4_armhf.buildinfo.asc Wed Jul 21 08:54:22 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Jul 21 08:54:22 UTC 2021 I: Done submitting .buildinfo files. Wed Jul 21 08:54:22 UTC 2021 I: Removing signed libtabixpp_1.1.0-4_armhf.buildinfo.asc files: removed './b1/libtabixpp_1.1.0-4_armhf.buildinfo.asc' removed './b2/libtabixpp_1.1.0-4_armhf.buildinfo.asc'