Tue Aug 24 00:37:19 UTC 2021 I: starting to build examl/bullseye/armhf on jenkins on '2021-08-24 00:37' Tue Aug 24 00:37:19 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_30/11153/console.log Tue Aug 24 00:37:19 UTC 2021 I: Downloading source for bullseye/examl=3.0.22-1 --2021-08-24 00:37:20-- http://cdn-fastly.deb.debian.org/debian/pool/main/e/examl/examl_3.0.22-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1976 (1.9K) Saving to: ‘examl_3.0.22-1.dsc’ 0K . 100% 80.0M=0s 2021-08-24 00:37:20 (80.0 MB/s) - ‘examl_3.0.22-1.dsc’ saved [1976/1976] Tue Aug 24 00:37:20 UTC 2021 I: examl_3.0.22-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: examl Binary: examl Architecture: any Version: 3.0.22-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/stamatak/ExaML Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/examl Vcs-Git: https://salsa.debian.org/med-team/examl.git Testsuite: autopkgtest Testsuite-Triggers: pocl-opencl-icd Build-Depends: debhelper-compat (= 12), libopenmpi-dev, libsimde-dev Package-List: examl deb science optional arch=any Checksums-Sha1: fe8373864ad1825b8eab7c76317090bfc2a180f6 941388 examl_3.0.22.orig.tar.gz c99271afd5dab366148710e8863b8b482380207c 26920 examl_3.0.22-1.debian.tar.xz Checksums-Sha256: 802e673b0c2ea83fdbe6b060048d83f22b6978933a04be64fb9b4334fe318ca3 941388 examl_3.0.22.orig.tar.gz a7d69b7f638d482c502545b08e3a5cd319c4a7eb03d31a1b80917122572075e1 26920 examl_3.0.22-1.debian.tar.xz Files: ad62d8c333cee316732c10f719c1e87c 941388 examl_3.0.22.orig.tar.gz ddb0448aacbc92a50d08f299b984c1bc 26920 examl_3.0.22-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl7VDEoACgkQPCZ2P2xn 5uJuXRAAvGByXNnTzh2+Q3bXy1HOLbJZaH7wlPhOHfrA1DFBaCakJdXcXbIBmMHD HwmvKtb6Yaop33n7jYcQ/rLK4x1I6rPFjJon26rg6r0Ai1VT2c8gaWq+QBB1iV3q 7v4Qd++5qvgv+cUtny3Z1Hrs4/xdlZLwQDMlkSzvMCJq/hzjTjGeGO2XCj6zYQCi /EP0xGulKo2SFfI3T5qXpptn6IpqJ5/JupefjfhnMvAjmWWLxSU6GpJ0Y0GuW1Pl jv1zZpfS+aTn05ekJoZ+yvcTXj5keN4xb31fsUx78yCnJqBYaU77Dva69tHAiMfN faLaIQHH54LcJcc18lqI11eFD3YF4lR3/qBOEddMbXQX7miNkCMWqYKbHlVd+aMJ ZjZgAqmLa3mNZ6CdcVs1Jpn0fNcpG8sd3hQudaZyc/47WC6DlDhM0UKQMb44NDSU 75301aOL64VK6CkfjkiAZvo0DzsENzrFRR853tDRLzKDOfqQnqOWxlr1XpdmnrHr FjiR1pKdIP0oRZ6fU9o124Ppm3y8y5Ms7Sos712aXBZAH+TcfCKnS7UCGRNZ/RsH 9Sm3rDpQa4yecUluljFP0D2XNRHqMNeLfOCBe1XUsW1KqLKOtFlNeppc89X4MdY1 3cVVHO2wc8qlK7EdoFRoA3ndIq4j0UWeCvyjbYJeuMrLZ4as/H4= =P/kh -----END PGP SIGNATURE----- Tue Aug 24 00:37:20 UTC 2021 I: Checking whether the package is not for us Tue Aug 24 00:37:20 UTC 2021 I: Starting 1st build on remote node ff64a-armhf-rb.debian.net. Tue Aug 24 00:37:20 UTC 2021 I: Preparing to do remote build '1' on ff64a-armhf-rb.debian.net. Tue Aug 24 00:44:25 UTC 2021 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Aug 23 12:37:28 -12 2021 I: pbuilder-time-stamp: 1629765448 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [examl_3.0.22-1.dsc] I: copying [./examl_3.0.22.orig.tar.gz] I: copying [./examl_3.0.22-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.vihwwry8/trustedkeys.kbx': General error gpgv: Signature made Mon Jun 1 02:10:18 2020 -12 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./examl_3.0.22-1.dsc dpkg-source: info: extracting examl in examl-3.0.22 dpkg-source: info: unpacking examl_3.0.22.orig.tar.gz dpkg-source: info: unpacking examl_3.0.22-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying simde I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/20827/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=5' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='88a203ab6ae74b7b9f3b4f20cceabcc5' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='20827' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.2rgWrxKSm5/pbuilderrc_ECP9 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.2rgWrxKSm5/b1 --logfile b1/build.log examl_3.0.22-1.dsc' SUDO_GID='114' SUDO_UID='109' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux ff64a 5.10.0-8-arm64 #1 SMP Debian 5.10.46-4 (2021-08-03) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Aug 4 08:25 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Jul 28 07:09 more -rwsr-xr-x 1 root root 34400 Jul 28 07:09 mount -rwxr-xr-x 1 root root 9824 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 20 21:28 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Jul 28 07:09 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 2021 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Jul 28 07:09 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/20827/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libopenmpi-dev, libsimde-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libopenmpi-dev; however: Package libopenmpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-10{a} groff-base{a} ibverbs-providers{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcbor0{a} libdebhelper-perl{a} libedit2{a} libelf1{a} libevent-2.1-7{a} libevent-core-2.1-7{a} libevent-dev{a} libevent-extra-2.1-7{a} libevent-openssl-2.1-7{a} libevent-pthreads-2.1-7{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-10-dev{a} libgfortran5{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu67{a} libjs-jquery{a} libjs-jquery-ui{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpipeline1{a} libpmix-dev{a} libpmix2{a} librdmacm1{a} libsigsegv2{a} libsimde-dev{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} m4{a} man-db{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common libarchive-cpio-perl libcoarrays-openmpi-dev libmail-sendmail-perl lynx wget xauth 0 packages upgraded, 81 newly installed, 0 to remove and 0 not upgraded. Need to get 36.1 MB of archives. After unpacking 126 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-8 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libmd0 armhf 1.0.3-3 [27.4 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf libbsd0 armhf 0.11.3-1 [103 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf libedit2 armhf 3.1-20191231-2+b1 [81.1 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf libcbor0 armhf 0.5.0+dfsg-2 [19.6 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf libfido2-1 armhf 1.6.0-2 [48.0 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf openssh-client armhf 1:8.4p1-5 [842 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libgfortran5 armhf 10.2.1-6 [237 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libgfortran-10-dev armhf 10.2.1-6 [289 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf gfortran-10 armhf 10.2.1-6 [7123 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libnl-3-200 armhf 3.4.0-1+b1 [55.5 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf libnl-route-3-200 armhf 3.4.0-1+b1 [136 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf libibverbs1 armhf 33.2-1 [53.0 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf ibverbs-providers armhf 33.2-1 [25.4 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf libevent-2.1-7 armhf 2.1.12-stable-1 [169 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libevent-core-2.1-7 armhf 2.1.12-stable-1 [127 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf libevent-extra-2.1-7 armhf 2.1.12-stable-1 [101 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf libevent-pthreads-2.1-7 armhf 2.1.12-stable-1 [56.8 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf libevent-openssl-2.1-7 armhf 2.1.12-stable-1 [61.6 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf libevent-dev armhf 2.1.12-stable-1 [296 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf librdmacm1 armhf 33.2-1 [60.8 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf libfabric1 armhf 1.11.0-2 [319 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf libhwloc15 armhf 2.4.1+dfsg-1 [125 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf libnuma1 armhf 2.0.12-1+b1 [22.7 kB] Get: 55 http://deb.debian.org/debian bullseye/main armhf libnuma-dev armhf 2.0.12-1+b1 [37.0 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf libltdl7 armhf 2.4.6-15 [388 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf libltdl-dev armhf 2.4.6-15 [159 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf libhwloc-dev armhf 2.4.1+dfsg-1 [208 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf libpciaccess0 armhf 0.16-1 [51.0 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 62 http://deb.debian.org/debian bullseye/main armhf libxcb1 armhf 1.14-3 [136 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf libx11-data all 2:1.7.2-1 [311 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf libx11-6 armhf 2:1.7.2-1 [713 kB] Get: 65 http://deb.debian.org/debian bullseye/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB] Get: 66 http://deb.debian.org/debian bullseye/main armhf libxnvctrl0 armhf 460.91.03-1 [25.8 kB] Get: 67 http://deb.debian.org/debian bullseye/main armhf ocl-icd-libopencl1 armhf 2.2.14-2 [39.7 kB] Get: 68 http://deb.debian.org/debian bullseye/main armhf libhwloc-plugins armhf 2.4.1+dfsg-1 [19.7 kB] Get: 69 http://deb.debian.org/debian bullseye/main armhf libnl-3-dev armhf 3.4.0-1+b1 [97.1 kB] Get: 70 http://deb.debian.org/debian bullseye/main armhf libnl-route-3-dev armhf 3.4.0-1+b1 [160 kB] Get: 71 http://deb.debian.org/debian bullseye/main armhf libibverbs-dev armhf 33.2-1 [183 kB] Get: 72 http://deb.debian.org/debian bullseye/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 73 http://deb.debian.org/debian bullseye/main armhf libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 74 http://deb.debian.org/debian bullseye/main armhf libpmix2 armhf 4.0.0-4.1 [487 kB] Get: 75 http://deb.debian.org/debian bullseye/main armhf libopenmpi3 armhf 4.1.0-10 [1831 kB] Get: 76 http://deb.debian.org/debian bullseye/main armhf openmpi-common all 4.1.0-10 [179 kB] Get: 77 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get: 78 http://deb.debian.org/debian bullseye/main armhf libpmix-dev armhf 4.0.0-4.1 [618 kB] Get: 79 http://deb.debian.org/debian bullseye/main armhf openmpi-bin armhf 4.1.0-10 [206 kB] Get: 80 http://deb.debian.org/debian bullseye/main armhf libopenmpi-dev armhf 4.1.0-10 [1143 kB] Get: 81 http://deb.debian.org/debian bullseye/main armhf libsimde-dev all 0.7.2-4 [259 kB] Fetched 36.1 MB in 8s (4783 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8_armhf.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... 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Preparing to unpack .../09-gettext-base_0.21-4_armhf.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libmd0:armhf. Preparing to unpack .../10-libmd0_1.0.3-3_armhf.deb ... Unpacking libmd0:armhf (1.0.3-3) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../11-libbsd0_0.11.3-1_armhf.deb ... Unpacking libbsd0:armhf (0.11.3-1) ... Selecting previously unselected package libedit2:armhf. Preparing to unpack .../12-libedit2_3.1-20191231-2+b1_armhf.deb ... Unpacking libedit2:armhf (3.1-20191231-2+b1) ... Selecting previously unselected package libcbor0:armhf. Preparing to unpack .../13-libcbor0_0.5.0+dfsg-2_armhf.deb ... Unpacking libcbor0:armhf (0.5.0+dfsg-2) ... Selecting previously unselected package libfido2-1:armhf. Preparing to unpack .../14-libfido2-1_1.6.0-2_armhf.deb ... Unpacking libfido2-1:armhf (1.6.0-2) ... Selecting previously unselected package openssh-client. 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Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../28-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../29-libelf1_0.183-1_armhf.deb ... Unpacking libelf1:armhf (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../30-dwz_0.13+20210201-1_armhf.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:armhf. Preparing to unpack .../31-libicu67_67.1-7_armhf.deb ... Unpacking libicu67:armhf (67.1-7) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../32-libxml2_2.9.10+dfsg-6.7_armhf.deb ... Unpacking libxml2:armhf (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../33-gettext_0.21-4_armhf.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../34-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../35-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../36-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package libgfortran5:armhf. Preparing to unpack .../37-libgfortran5_10.2.1-6_armhf.deb ... Unpacking libgfortran5:armhf (10.2.1-6) ... Selecting previously unselected package libgfortran-10-dev:armhf. Preparing to unpack .../38-libgfortran-10-dev_10.2.1-6_armhf.deb ... Unpacking libgfortran-10-dev:armhf (10.2.1-6) ... Selecting previously unselected package gfortran-10. Preparing to unpack .../39-gfortran-10_10.2.1-6_armhf.deb ... Unpacking gfortran-10 (10.2.1-6) ... Selecting previously unselected package libnl-3-200:armhf. Preparing to unpack .../40-libnl-3-200_3.4.0-1+b1_armhf.deb ... Unpacking libnl-3-200:armhf (3.4.0-1+b1) ... Selecting previously unselected package libnl-route-3-200:armhf. Preparing to unpack .../41-libnl-route-3-200_3.4.0-1+b1_armhf.deb ... Unpacking libnl-route-3-200:armhf (3.4.0-1+b1) ... Selecting previously unselected package libibverbs1:armhf. Preparing to unpack .../42-libibverbs1_33.2-1_armhf.deb ... Unpacking libibverbs1:armhf (33.2-1) ... Selecting previously unselected package ibverbs-providers:armhf. Preparing to unpack .../43-ibverbs-providers_33.2-1_armhf.deb ... Unpacking ibverbs-providers:armhf (33.2-1) ... Selecting previously unselected package libevent-2.1-7:armhf. Preparing to unpack .../44-libevent-2.1-7_2.1.12-stable-1_armhf.deb ... Unpacking libevent-2.1-7:armhf (2.1.12-stable-1) ... Selecting previously unselected package libevent-core-2.1-7:armhf. Preparing to unpack .../45-libevent-core-2.1-7_2.1.12-stable-1_armhf.deb ... Unpacking libevent-core-2.1-7:armhf (2.1.12-stable-1) ... Selecting previously unselected package libevent-extra-2.1-7:armhf. Preparing to unpack .../46-libevent-extra-2.1-7_2.1.12-stable-1_armhf.deb ... Unpacking libevent-extra-2.1-7:armhf (2.1.12-stable-1) ... Selecting previously unselected package libevent-pthreads-2.1-7:armhf. Preparing to unpack .../47-libevent-pthreads-2.1-7_2.1.12-stable-1_armhf.deb ... Unpacking libevent-pthreads-2.1-7:armhf (2.1.12-stable-1) ... Selecting previously unselected package libevent-openssl-2.1-7:armhf. Preparing to unpack .../48-libevent-openssl-2.1-7_2.1.12-stable-1_armhf.deb ... Unpacking libevent-openssl-2.1-7:armhf (2.1.12-stable-1) ... Selecting previously unselected package libevent-dev. Preparing to unpack .../49-libevent-dev_2.1.12-stable-1_armhf.deb ... Unpacking libevent-dev (2.1.12-stable-1) ... Selecting previously unselected package librdmacm1:armhf. Preparing to unpack .../50-librdmacm1_33.2-1_armhf.deb ... Unpacking librdmacm1:armhf (33.2-1) ... Selecting previously unselected package libfabric1. Preparing to unpack .../51-libfabric1_1.11.0-2_armhf.deb ... Unpacking libfabric1 (1.11.0-2) ... Selecting previously unselected package libhwloc15:armhf. Preparing to unpack .../52-libhwloc15_2.4.1+dfsg-1_armhf.deb ... Unpacking libhwloc15:armhf (2.4.1+dfsg-1) ... Selecting previously unselected package libnuma1:armhf. Preparing to unpack .../53-libnuma1_2.0.12-1+b1_armhf.deb ... Unpacking libnuma1:armhf (2.0.12-1+b1) ... Selecting previously unselected package libnuma-dev:armhf. Preparing to unpack .../54-libnuma-dev_2.0.12-1+b1_armhf.deb ... Unpacking libnuma-dev:armhf (2.0.12-1+b1) ... Selecting previously unselected package libltdl7:armhf. Preparing to unpack .../55-libltdl7_2.4.6-15_armhf.deb ... Unpacking libltdl7:armhf (2.4.6-15) ... Selecting previously unselected package libltdl-dev:armhf. 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Preparing to unpack .../62-libx11-data_2%3a1.7.2-1_all.deb ... Unpacking libx11-data (2:1.7.2-1) ... Selecting previously unselected package libx11-6:armhf. Preparing to unpack .../63-libx11-6_2%3a1.7.2-1_armhf.deb ... Unpacking libx11-6:armhf (2:1.7.2-1) ... Selecting previously unselected package libxext6:armhf. Preparing to unpack .../64-libxext6_2%3a1.3.3-1.1_armhf.deb ... Unpacking libxext6:armhf (2:1.3.3-1.1) ... Selecting previously unselected package libxnvctrl0:armhf. Preparing to unpack .../65-libxnvctrl0_460.91.03-1_armhf.deb ... Unpacking libxnvctrl0:armhf (460.91.03-1) ... Selecting previously unselected package ocl-icd-libopencl1:armhf. Preparing to unpack .../66-ocl-icd-libopencl1_2.2.14-2_armhf.deb ... Unpacking ocl-icd-libopencl1:armhf (2.2.14-2) ... Selecting previously unselected package libhwloc-plugins:armhf. Preparing to unpack .../67-libhwloc-plugins_2.4.1+dfsg-1_armhf.deb ... Unpacking libhwloc-plugins:armhf (2.4.1+dfsg-1) ... Selecting previously unselected package libnl-3-dev:armhf. Preparing to unpack .../68-libnl-3-dev_3.4.0-1+b1_armhf.deb ... Unpacking libnl-3-dev:armhf (3.4.0-1+b1) ... Selecting previously unselected package libnl-route-3-dev:armhf. Preparing to unpack .../69-libnl-route-3-dev_3.4.0-1+b1_armhf.deb ... Unpacking libnl-route-3-dev:armhf (3.4.0-1+b1) ... Selecting previously unselected package libibverbs-dev:armhf. Preparing to unpack .../70-libibverbs-dev_33.2-1_armhf.deb ... Unpacking libibverbs-dev:armhf (33.2-1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../71-libjs-jquery_3.5.1+dfsg+~3.5.5-7_all.deb ... Unpacking libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../72-libjs-jquery-ui_1.12.1+dfsg-8_all.deb ... Unpacking libjs-jquery-ui (1.12.1+dfsg-8) ... Selecting previously unselected package libpmix2:armhf. Preparing to unpack .../73-libpmix2_4.0.0-4.1_armhf.deb ... Unpacking libpmix2:armhf (4.0.0-4.1) ... Selecting previously unselected package libopenmpi3:armhf. Preparing to unpack .../74-libopenmpi3_4.1.0-10_armhf.deb ... Unpacking libopenmpi3:armhf (4.1.0-10) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../75-openmpi-common_4.1.0-10_all.deb ... Unpacking openmpi-common (4.1.0-10) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../76-zlib1g-dev_1%3a1.2.11.dfsg-2_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Selecting previously unselected package libpmix-dev:armhf. Preparing to unpack .../77-libpmix-dev_4.0.0-4.1_armhf.deb ... Unpacking libpmix-dev:armhf (4.0.0-4.1) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../78-openmpi-bin_4.1.0-10_armhf.deb ... Unpacking openmpi-bin (4.1.0-10) ... Selecting previously unselected package libopenmpi-dev:armhf. Preparing to unpack .../79-libopenmpi-dev_4.1.0-10_armhf.deb ... Unpacking libopenmpi-dev:armhf (4.1.0-10) ... Selecting previously unselected package libsimde-dev. Preparing to unpack .../80-libsimde-dev_0.7.2-4_all.deb ... Unpacking libsimde-dev (0.7.2-4) ... Setting up libpipeline1:armhf (1.5.3-1) ... Setting up libsimde-dev (0.7.2-4) ... Setting up libpciaccess0:armhf (0.16-1) ... Setting up libxau6:armhf (1:1.0.9-1) ... Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:armhf (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libcbor0:armhf (0.5.0+dfsg-2) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libx11-data (2:1.7.2-1) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up libhwloc15:armhf (2.4.1+dfsg-1) ... Setting up libevent-core-2.1-7:armhf (2.1.12-stable-1) ... Setting up libevent-2.1-7:armhf (2.1.12-stable-1) ... Setting up autopoint (0.21-4) ... Setting up libltdl7:armhf (2.4.6-15) ... Setting up libgfortran5:armhf (10.2.1-6) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up libnuma1:armhf (2.0.12-1+b1) ... Setting up libmd0:armhf (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up ocl-icd-libopencl1:armhf (2.2.14-2) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libnl-3-200:armhf (3.4.0-1+b1) ... Setting up openmpi-common (4.1.0-10) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgfortran-10-dev:armhf (10.2.1-6) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libfido2-1:armhf (1.6.0-2) ... Setting up libbsd0:armhf (0.11.3-1) ... Setting up libelf1:armhf (0.183-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up libevent-pthreads-2.1-7:armhf (2.1.12-stable-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libevent-extra-2.1-7:armhf (2.1.12-stable-1) ... Setting up libxcb1:armhf (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libedit2:armhf (3.1-20191231-2+b1) ... Setting up libevent-openssl-2.1-7:armhf (2.1.12-stable-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnuma-dev:armhf (2.0.12-1+b1) ... Setting up libnl-route-3-200:armhf (3.4.0-1+b1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libevent-dev (2.1.12-stable-1) ... Setting up gfortran-10 (10.2.1-6) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up libnl-3-dev:armhf (3.4.0-1+b1) ... Setting up groff-base (1.22.4-6) ... Setting up libx11-6:armhf (2:1.7.2-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libibverbs1:armhf (33.2-1) ... Setting up ibverbs-providers:armhf (33.2-1) ... Setting up openssh-client (1:8.4p1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:armhf (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxnvctrl0:armhf (460.91.03-1) ... Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:armhf (3.4.0-1+b1) ... Setting up libltdl-dev:armhf (2.4.6-15) ... Setting up libhwloc-dev:armhf (2.4.1+dfsg-1) ... Setting up librdmacm1:armhf (33.2-1) ... Setting up debhelper (13.3.4) ... Setting up libibverbs-dev:armhf (33.2-1) ... Setting up libhwloc-plugins:armhf (2.4.1+dfsg-1) ... Setting up libfabric1 (1.11.0-2) ... Setting up libpmix2:armhf (4.0.0-4.1) ... Setting up libopenmpi3:armhf (4.1.0-10) ... Setting up libpmix-dev:armhf (4.0.0-4.1) ... Setting up openmpi-bin (4.1.0-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:armhf (4.1.0-10) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/examl-3.0.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../examl_3.0.22-1_source.changes dpkg-buildpackage: info: source package examl dpkg-buildpackage: info: source version 3.0.22-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --sourcedirectory=examl debian/rules override_dh_auto_clean make[1]: Entering directory '/build/examl-3.0.22' dh_auto_clean /usr/bin/make --directory=parser -f Makefile.SSE3.gcc clean make[2]: Entering directory '/build/examl-3.0.22/parser' rm -f *.o parse-examl"" make[2]: Leaving directory '/build/examl-3.0.22/parser' make[1]: Leaving directory '/build/examl-3.0.22' dh_autoreconf_clean -O--sourcedirectory=examl dh_clean -O--sourcedirectory=examl debian/rules binary dh binary --sourcedirectory=examl dh_update_autotools_config -O--sourcedirectory=examl dh_autoreconf -O--sourcedirectory=examl dh_auto_configure -O--sourcedirectory=examl debian/rules override_dh_auto_build make[1]: Entering directory '/build/examl-3.0.22' dh_auto_build /usr/bin/make --directory=examl -f Makefile.AVX.gcc make[2]: Entering directory '/build/examl-3.0.22/examl' rm -f *.o examl"" mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o axml.o axml.c In function ‘initializePartitions’, inlined from ‘initializeTree’ at axml.c:2217:3, inlined from ‘main’ at axml.c:2631:5: axml.c:2121:40: warning: argument 1 range [2147483648, 4294967295] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 2121 | *modelWeights = (unsigned long*) calloc(tr->NumberOfModels, sizeof(unsigned long)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from axml.c:44: axml.c: In function ‘main’: /usr/include/stdlib.h:542:14: note: in a call to allocation function ‘calloc’ declared here 542 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o optimizeModel.o optimizeModel.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o trash.o trash.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o searchAlgo.o searchAlgo.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o topologies.o topologies.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o treeIO.o treeIO.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o models.o models.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o evaluatePartialGenericSpecial.o evaluatePartialGenericSpecial.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o evaluateGenericSpecial.o evaluateGenericSpecial.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o newviewGenericSpecial.o newviewGenericSpecial.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o makenewzGenericSpecial.o makenewzGenericSpecial.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bipartitionList.o bipartitionList.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o restartHashTable.o restartHashTable.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o avxLikelihood.o avxLikelihood.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o byteFile.o byteFile.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o partitionAssignment.o partitionAssignment.c partitionAssignment.c: In function ‘printAssignment’: partitionAssignment.c:457:21: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 457 | printf("p: %d\t(%lu,%lu) -> proc %d\n", a.partId, a.offset, a.width , procid); | ~~^ ~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c:457:25: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 457 | printf("p: %d\t(%lu,%lu) -> proc %d\n", a.partId, a.offset, a.width , procid); | ~~^ ~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c: In function ‘printAssignments’: partitionAssignment.c:470:18: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 470 | printf("%d\t%lu\t%lu\t%d\n", i,a.offset, a.width, a.partId); | ~~^ ~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c:470:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 470 | printf("%d\t%lu\t%lu\t%d\n", i,a.offset, a.width, a.partId); | ~~^ ~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c: In function ‘printLoad’: partitionAssignment.c:498:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 498 | printf("%d\t%d\t%lu\n", i, numsPerProc[i], sitesPerProc[i]); | ~~^ ~~~~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o communication.o communication.c mpicc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o quartets.o quartets.c mpicc -o examl"" axml.o optimizeModel.o trash.o searchAlgo.o topologies.o treeIO.o models.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o bipartitionList.o restartHashTable.o avxLikelihood.o byteFile.o partitionAssignment.o communication.o quartets.o -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/examl-3.0.22/examl' /usr/bin/make --directory=examl -f Makefile.OMP.AVX.gcc make[2]: Entering directory '/build/examl-3.0.22/examl' mpicc -o examl-OMP"" axml.o optimizeModel.o trash.o searchAlgo.o topologies.o treeIO.o models.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o bipartitionList.o restartHashTable.o avxLikelihood.o byteFile.o partitionAssignment.o communication.o quartets.o -lm -fopenmp -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/examl-3.0.22/examl' /usr/bin/make --directory=parser -f Makefile.SSE3.gcc make[2]: Entering directory '/build/examl-3.0.22/parser' rm -f *.o parse-examl"" gcc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -O2 -D_GNU_SOURCE -funroll-loops -Wall -Wunused-parameter -Wredundant-decls -Wreturn-type -Wswitch-default -Wunused-value -Wimplicit -Wimplicit-function-declaration -Wimplicit-int -Wimport -Wunused -Wunused-function -Wunused-label -Wno-int-to-pointer-cast -Wbad-function-cast -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wold-style-definition -Wstrict-prototypes -Wpointer-sign -Wextra -Wredundant-decls -Wunused -Wunused-function -Wunused-parameter -Wunused-value -Wunused-variable -Wformat -Wformat-nonliteral -Wparentheses -Wsequence-point -Wuninitialized -Wundef -Wbad-function-cast -Wdate-time -D_FORTIFY_SOURCE=2 -c -o axml.o axml.c axml.c: In function ‘genericBaseFrequencies’: axml.c:2509:19: warning: comparison is always true due to limited range of data type [-Wtype-limits] 2509 | if(yptr[j] >= 0 && yptr[j] < 20) | ^~ gcc -g -O2 -fdebug-prefix-map=/build/examl-3.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -O2 -D_GNU_SOURCE -funroll-loops -Wall -Wunused-parameter -Wredundant-decls -Wreturn-type -Wswitch-default -Wunused-value -Wimplicit -Wimplicit-function-declaration -Wimplicit-int -Wimport -Wunused -Wunused-function -Wunused-label -Wno-int-to-pointer-cast -Wbad-function-cast -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wold-style-definition -Wstrict-prototypes -Wpointer-sign -Wextra -Wredundant-decls -Wunused -Wunused-function -Wunused-parameter -Wunused-value -Wunused-variable -Wformat -Wformat-nonliteral -Wparentheses -Wsequence-point -Wuninitialized -Wundef -Wbad-function-cast -Wdate-time -D_FORTIFY_SOURCE=2 -c -o parsePartitions.o parsePartitions.c gcc -o parse-examl"" axml.o parsePartitions.o -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/examl-3.0.22/parser' make[1]: Leaving directory '/build/examl-3.0.22' dh_auto_test -O--sourcedirectory=examl create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=examl dh_prep -O--sourcedirectory=examl debian/rules override_dh_auto_install make[1]: Entering directory '/build/examl-3.0.22' dh_install examl/{examl,examl-OMP} parser/parse-examl /usr/bin/ make[1]: Leaving directory '/build/examl-3.0.22' dh_installdocs -O--sourcedirectory=examl dh_installchangelogs -O--sourcedirectory=examl dh_installman -O--sourcedirectory=examl dh_installinit -O--sourcedirectory=examl dh_installsystemduser -O--sourcedirectory=examl dh_perl -O--sourcedirectory=examl dh_link -O--sourcedirectory=examl dh_strip_nondeterminism -O--sourcedirectory=examl dh_compress -O--sourcedirectory=examl dh_fixperms -O--sourcedirectory=examl dh_missing -O--sourcedirectory=examl dh_dwz -O--sourcedirectory=examl dh_strip -O--sourcedirectory=examl dh_makeshlibs -O--sourcedirectory=examl dh_shlibdeps -O--sourcedirectory=examl dh_installdeb -O--sourcedirectory=examl debian/rules override_dh_gencontrol make[1]: Entering directory '/build/examl-3.0.22' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.7.2-4), " make[1]: Leaving directory '/build/examl-3.0.22' dh_md5sums -O--sourcedirectory=examl dh_builddeb -O--sourcedirectory=examl dpkg-deb: building package 'examl' in '../examl_3.0.22-1_armhf.deb'. dpkg-deb: building package 'examl-dbgsym' in '../examl-dbgsym_3.0.22-1_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../examl_3.0.22-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/20827 and its subdirectories I: Current time: Mon Aug 23 12:44:16 -12 2021 I: pbuilder-time-stamp: 1629765856 Tue Aug 24 00:44:27 UTC 2021 I: 1st build successful. Starting 2nd build on remote node virt32c-armhf-rb.debian.net. Tue Aug 24 00:44:27 UTC 2021 I: Preparing to do remote build '2' on virt32c-armhf-rb.debian.net. Tue Aug 24 00:47:48 UTC 2021 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. Tue Aug 24 00:47:50 UTC 2021 I: examl_3.0.22-1_armhf.changes: Format: 1.8 Date: Mon, 01 Jun 2020 16:09:49 +0200 Source: examl Binary: examl examl-dbgsym Architecture: armhf Version: 3.0.22-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: examl - Exascale Maximum Likelihood (ExaML) code for phylogenetic inferen Changes: examl (3.0.22-1) unstable; urgency=medium . * Team upload. * New upstream release. * For GPL compliance, document libsimde-dev usage and version number via Built-Using * Refresh hardening patch, almost all of it was applied upstream. Checksums-Sha1: 79887b85955800a9c7cf9da71ef06ffda3cfc0e5 510760 examl-dbgsym_3.0.22-1_armhf.deb a388d2596ff1308a37aa74b8d6c40fb747e2ceb2 6365 examl_3.0.22-1_armhf.buildinfo 6e4d715751085fabeb76e1f4d62edfa31e9326d5 804708 examl_3.0.22-1_armhf.deb Checksums-Sha256: 442fc442a9875a9c2b19e9af76cba23877c74683e99bf43802b8287c63ab4ae1 510760 examl-dbgsym_3.0.22-1_armhf.deb 412a396f0fca06ee5bd69eb55704f17c597d3b5488ca437fea1be30f1d6549fd 6365 examl_3.0.22-1_armhf.buildinfo b52e5573ce7d00498ef454cc02159adb2c873e4c9969e93fd3d602a1819e3272 804708 examl_3.0.22-1_armhf.deb Files: 9a9eb7b0793d306e79b7cedf2e8deacb 510760 debug optional examl-dbgsym_3.0.22-1_armhf.deb c724e3b0af72a32e4b34963b10a57770 6365 science optional examl_3.0.22-1_armhf.buildinfo 3d80c93f1655b102ace0d8253e7e98d7 804708 science optional examl_3.0.22-1_armhf.deb Tue Aug 24 00:47:52 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.2rgWrxKSm5/examl_3.0.22-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.2rgWrxKSm5/examl_3.0.22-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.2rgWrxKSm5/examl_3.0.22-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.2rgWrxKSm5/b1/examl_3.0.22-1_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.2rgWrxKSm5/b2/examl_3.0.22-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.272s) 0.272s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.031s) 0.031s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Aug 24 00:47:53 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Tue Aug 24 00:47:53 UTC 2021 I: examl from bullseye built successfully and reproducibly on armhf. Tue Aug 24 00:47:54 UTC 2021 I: Submitting .buildinfo files to external archives: Tue Aug 24 00:47:54 UTC 2021 I: Submitting 8.0K b1/examl_3.0.22-1_armhf.buildinfo.asc Tue Aug 24 00:47:55 UTC 2021 I: Submitting 8.0K b2/examl_3.0.22-1_armhf.buildinfo.asc Tue Aug 24 00:47:56 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Aug 24 00:47:56 UTC 2021 I: Done submitting .buildinfo files. Tue Aug 24 00:47:56 UTC 2021 I: Removing signed examl_3.0.22-1_armhf.buildinfo.asc files: removed './b1/examl_3.0.22-1_armhf.buildinfo.asc' removed './b2/examl_3.0.22-1_armhf.buildinfo.asc'