Fri Jul 9 00:10:25 UTC 2021 I: starting to build libminc/bullseye/arm64 on jenkins on '2021-07-09 00:10' Fri Jul 9 00:10:25 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_30/11010/console.log Fri Jul 9 00:10:25 UTC 2021 I: Downloading source for bullseye/libminc=2.4.03-3 --2021-07-09 00:10:26-- http://cdn-fastly.deb.debian.org/debian/pool/main/libm/libminc/libminc_2.4.03-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2105 (2.1K) Saving to: ‘libminc_2.4.03-3.dsc’ 0K .. 100% 110M=0s 2021-07-09 00:10:26 (110 MB/s) - ‘libminc_2.4.03-3.dsc’ saved [2105/2105] Fri Jul 9 00:10:26 UTC 2021 I: libminc_2.4.03-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libminc Binary: libminc2-5.2.0, libminc-dev Architecture: any Version: 2.4.03-3 Maintainer: Debian Med Packaging Team Uploaders: Steve M. Robbins , Andreas Tille Homepage: https://github.com/BIC-MNI/libminc Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/libminc Vcs-Git: https://salsa.debian.org/med-team/libminc.git Build-Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev Package-List: libminc-dev deb libdevel optional arch=any libminc2-5.2.0 deb libs optional arch=any Checksums-Sha1: 2cd8caad45d49cac77137e03ea584be76f32f923 809098 libminc_2.4.03.orig.tar.gz ec233ca6729bdada100788bed5a73203554319d7 9048 libminc_2.4.03-3.debian.tar.xz Checksums-Sha256: 7ee57846641d92988e96eb6d2c88ff2d922cd2b42a9e6256cf4213953ca896e4 809098 libminc_2.4.03.orig.tar.gz 796a72d00aec6b4af9f5e529fba90ba61f3e072d76c7af694d33482fa299ce92 9048 libminc_2.4.03-3.debian.tar.xz Files: 98b270f1ce536346662c34ee85e3e22a 809098 libminc_2.4.03.orig.tar.gz 52483d186c1d300ddc1e9fb9988106e7 9048 libminc_2.4.03-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl+079kRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGBiQ/+NYoUZJtiHQ0guIV4ovdM0p3TgY0Kq9BY 1esp0+JACxzfew7Eoq1cUW2o+prtWturPq0MFUdA4uqBMUJQwlYb3LQS9/yX+a6j KxdMPLpPGHV1Y1NQ9auUdjjrhmUQSlIqTdyWSZN8GRWuvmIi2VDVkdvCGPkE8aHQ RHgloDRD87TodKSbYmbTbMkqqpSzLlVgvonpqRNZGGGuH48k3f7Wl37CuAnK2FlT EPKdnnLjYy/wKrWFTxAfSn6kHCl2K+a1End+FMF9iyJTWxvkIS7PT3wna9UvpP+D erPRVgrmu80NvL8MrJN+mF6McLZY+ZhLykqBJMJ2fOjtaTHSy7wEhaxdV45xiNi4 ylEm2DWdmeAkQDg3fIDuVYOC0u09TPoJnYIuw75l7BYk7P6nLeMf1zyyR6/inZ0t SVTHRgZRxG1iR+2jfJuNRzdkUi6AQVSJc6H2SGngmEuQThiRgx1SbN1VsCWHpnM8 5FDpYGV31eN0vkr14gHQkgKibVoBoRmmwDlz2NrYzehEu/sXh38MbHvBgS0HwMkQ D37htQedRuwQT+KN4J+mnpKhXBgvtnuO4rgcvDkuy7orEAOpdUj9xZ4/mByZdofm vZPMcZ+TLo6LhWU4wo/fjX+RbY9fKnAfXRXejKTMp3N/M4v0k62iUahBB+ZyRiDU LIQUeCxZvDE= =q/eJ -----END PGP SIGNATURE----- Fri Jul 9 00:10:26 UTC 2021 I: Checking whether the package is not for us Fri Jul 9 00:10:26 UTC 2021 I: Starting 1st build on remote node codethink16-arm64.debian.net. Fri Jul 9 00:10:26 UTC 2021 I: Preparing to do remote build '1' on codethink16-arm64.debian.net. Fri Jul 9 00:13:47 UTC 2021 I: Deleting $TMPDIR on codethink16-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jul 8 12:10:32 -12 2021 I: pbuilder-time-stamp: 1625789432 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libminc_2.4.03-3.dsc] I: copying [./libminc_2.4.03.orig.tar.gz] I: copying [./libminc_2.4.03-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.ucAB8nWo/trustedkeys.kbx': General error gpgv: Signature made Tue Nov 17 21:56:41 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libminc_2.4.03-3.dsc dpkg-source: info: extracting libminc in libminc-2.4.03 dpkg-source: info: unpacking libminc_2.4.03.orig.tar.gz dpkg-source: info: unpacking libminc_2.4.03-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build-using-system-find-dot-cmake dpkg-source: info: applying fix-uselibminc-cmake dpkg-source: info: applying netcdf-4.6.patch dpkg-source: info: applying remove-rpath.patch dpkg-source: info: applying initialize_arrays_in_tests.patch dpkg-source: info: applying disable-dimension-test.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2697/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2697' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/pbuilderrc_wKMz --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/b1 --logfile b1/build.log libminc_2.4.03-3.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink16-arm64 4.15.0-147-generic #151-Ubuntu SMP Fri Jun 18 19:18:37 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Jun 21 14:26 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 64856 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 93744 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 161960 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Feb 7 02:38 more -rwsr-xr-x 1 root root 51360 Feb 7 02:38 mount -rwxr-xr-x 1 root root 14496 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 7 21:24 sh -> dash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Feb 7 02:38 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 16 21:55 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30880 Feb 7 02:38 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/2697/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libnetcdf-dev; however: Package libnetcdf-dev is not installed. pbuilder-satisfydepends-dummy depends on libnifti-dev; however: Package libnifti-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl3-gnutls{a} libcurl4{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp24{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnetcdf-dev{a} libnetcdf18{a} libnghttp2-14{a} libnifti-dev{a} libnifti2-2{a} libnifti2-dev{a} libnifticdf-dev{a} libnifticdf2{a} libniftiio-dev{a} libniftiio2{a} libpipeline1{a} libprocps8{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} libznz-dev{a} libznz3{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx pkg-config pkgconf psmisc publicsuffix wget 0 packages upgraded, 80 newly installed, 0 to remove and 0 not upgraded. Need to get 32.8 MB of archives. After unpacking 133 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2 [93.2 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libprocps8 arm64 2:3.3.17-5 [61.9 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 procps arm64 2:3.3.17-5 [497 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 cmake-data all 3.18.4-2 [1725 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libarchive13 arm64 3.4.3-2+b1 [320 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 libbrotli1 arm64 1.0.9-2+b2 [267 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2.1 [69.3 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2.1 [105 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libldap-2.4-2 arm64 2.4.57+dfsg-3 [222 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 libnghttp2-14 arm64 1.43.0-1 [73.8 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 libssh2-1 arm64 1.9.0-2 [150 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 libcurl4 arm64 7.74.0-1.3+b1 [321 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 libjsoncpp24 arm64 1.9.4-4 [72.5 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 librhash0 arm64 1.4.1-2 [127 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libuv1 arm64 1.40.0-1 [126 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 cmake arm64 3.18.4-2 [3673 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 dh-exec arm64 0.23.2 [26.2 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 hdf5-helpers arm64 1.10.6+repack-4 [40.4 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libaec0 arm64 1.0.4-1 [19.8 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 libsz2 arm64 1.0.4-1 [6736 B] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libaec-dev arm64 1.0.4-1 [18.2 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libcurl3-gnutls arm64 7.74.0-1.3+b1 [318 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 libcurl4-gnutls-dev arm64 7.74.0-1.3+b1 [419 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 libhdf5-103-1 arm64 1.10.6+repack-4 [1032 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 libhdf5-cpp-103-1 arm64 1.10.6+repack-4 [131 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 libhdf5-fortran-102 arm64 1.10.6+repack-4 [103 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 libhdf5-hl-100 arm64 1.10.6+repack-4 [78.6 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 libhdf5-hl-fortran-100 arm64 1.10.6+repack-4 [55.0 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 libhdf5-hl-cpp-100 arm64 1.10.6+repack-4 [37.6 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo arm64 1:2.0.6-4 [133 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo-dev arm64 1:2.0.6-4 [255 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 libjpeg-dev arm64 1:2.0.6-4 [67.8 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 libhdf5-dev arm64 1.10.6+repack-4 [2535 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 libnetcdf18 arm64 1:4.7.4-1 [377 kB] Get: 71 http://deb.debian.org/debian bullseye/main arm64 libnetcdf-dev arm64 1:4.7.4-1 [93.6 kB] Get: 72 http://deb.debian.org/debian bullseye/main arm64 libznz3 arm64 3.0.1-8 [13.7 kB] Get: 73 http://deb.debian.org/debian bullseye/main arm64 libnifti2-2 arm64 3.0.1-8 [74.0 kB] Get: 74 http://deb.debian.org/debian bullseye/main arm64 libnifticdf2 arm64 3.0.1-8 [49.3 kB] Get: 75 http://deb.debian.org/debian bullseye/main arm64 libnifticdf-dev arm64 3.0.1-8 [56.1 kB] Get: 76 http://deb.debian.org/debian bullseye/main arm64 libniftiio2 arm64 3.0.1-8 [63.5 kB] Get: 77 http://deb.debian.org/debian bullseye/main arm64 libniftiio-dev arm64 3.0.1-8 [70.7 kB] Get: 78 http://deb.debian.org/debian bullseye/main arm64 libznz-dev arm64 3.0.1-8 [14.2 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libnifti2-dev arm64 3.0.1-8 [96.8 kB] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libnifti-dev all 3.0.1-8 [12.7 kB] Fetched 32.8 MB in 1s (31.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_arm64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../01-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../03-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../05-libncurses6_6.2+20201114-2_arm64.deb ... Unpacking libncurses6:arm64 (6.2+20201114-2) ... Selecting previously unselected package libprocps8:arm64. Preparing to unpack .../06-libprocps8_2%3a3.3.17-5_arm64.deb ... Unpacking libprocps8:arm64 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../07-procps_2%3a3.3.17-5_arm64.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../08-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../09-libmagic-mgc_1%3a5.39-3_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../10-libmagic1_1%3a5.39-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../11-file_1%3a5.39-3_arm64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../12-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../13-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../15-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../16-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../17-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../18-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package cmake-data. Preparing to unpack .../19-cmake-data_3.18.4-2_all.deb ... Unpacking cmake-data (3.18.4-2) ... Selecting previously unselected package libicu67:arm64. Preparing to unpack .../20-libicu67_67.1-7_arm64.deb ... Unpacking libicu67:arm64 (67.1-7) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../21-libxml2_2.9.10+dfsg-6.7_arm64.deb ... Unpacking libxml2:arm64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../22-libarchive13_3.4.3-2+b1_arm64.deb ... Unpacking libarchive13:arm64 (3.4.3-2+b1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../23-libbrotli1_1.0.9-2+b2_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b2) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../24-libsasl2-modules-db_2.1.27+dfsg-2.1_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../25-libsasl2-2_2.1.27+dfsg-2.1_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libldap-2.4-2:arm64. Preparing to unpack .../26-libldap-2.4-2_2.4.57+dfsg-3_arm64.deb ... Unpacking libldap-2.4-2:arm64 (2.4.57+dfsg-3) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../27-libnghttp2-14_1.43.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.43.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../28-libpsl5_0.21.0-1.2_arm64.deb ... Unpacking libpsl5:arm64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../29-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../30-libssh2-1_1.9.0-2_arm64.deb ... Unpacking libssh2-1:arm64 (1.9.0-2) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../31-libcurl4_7.74.0-1.3+b1_arm64.deb ... Unpacking libcurl4:arm64 (7.74.0-1.3+b1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../32-libexpat1_2.2.10-2_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-2) ... Selecting previously unselected package libjsoncpp24:arm64. Preparing to unpack .../33-libjsoncpp24_1.9.4-4_arm64.deb ... Unpacking libjsoncpp24:arm64 (1.9.4-4) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../34-librhash0_1.4.1-2_arm64.deb ... Unpacking librhash0:arm64 (1.4.1-2) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../35-libuv1_1.40.0-1_arm64.deb ... Unpacking libuv1:arm64 (1.40.0-1) ... Selecting previously unselected package cmake. Preparing to unpack .../36-cmake_3.18.4-2_arm64.deb ... Unpacking cmake (3.18.4-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../37-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../38-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../39-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../40-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../41-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../42-libfile-stripnondeterminism-perl_1.11.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.11.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../43-dh-strip-nondeterminism_1.11.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.11.0-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../44-libelf1_0.183-1_arm64.deb ... Unpacking libelf1:arm64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../45-dwz_0.13+20210201-1_arm64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package gettext. Preparing to unpack .../46-gettext_0.21-4_arm64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../47-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../48-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../49-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package dh-exec. Preparing to unpack .../50-dh-exec_0.23.2_arm64.deb ... Unpacking dh-exec (0.23.2) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../51-hdf5-helpers_1.10.6+repack-4_arm64.deb ... Unpacking hdf5-helpers (1.10.6+repack-4) ... Selecting previously unselected package libaec0:arm64. Preparing to unpack .../52-libaec0_1.0.4-1_arm64.deb ... Unpacking libaec0:arm64 (1.0.4-1) ... Selecting previously unselected package libsz2:arm64. Preparing to unpack .../53-libsz2_1.0.4-1_arm64.deb ... Unpacking libsz2:arm64 (1.0.4-1) ... Selecting previously unselected package libaec-dev:arm64. Preparing to unpack .../54-libaec-dev_1.0.4-1_arm64.deb ... Unpacking libaec-dev:arm64 (1.0.4-1) ... Selecting previously unselected package libcurl3-gnutls:arm64. Preparing to unpack .../55-libcurl3-gnutls_7.74.0-1.3+b1_arm64.deb ... Unpacking libcurl3-gnutls:arm64 (7.74.0-1.3+b1) ... Selecting previously unselected package libcurl4-gnutls-dev:arm64. Preparing to unpack .../56-libcurl4-gnutls-dev_7.74.0-1.3+b1_arm64.deb ... Unpacking libcurl4-gnutls-dev:arm64 (7.74.0-1.3+b1) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../57-libgfortran5_10.2.1-6_arm64.deb ... Unpacking libgfortran5:arm64 (10.2.1-6) ... Selecting previously unselected package libhdf5-103-1:arm64. Preparing to unpack .../58-libhdf5-103-1_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-103-1:arm64 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-cpp-103-1:arm64. Preparing to unpack .../59-libhdf5-cpp-103-1_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-cpp-103-1:arm64 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-fortran-102:arm64. Preparing to unpack .../60-libhdf5-fortran-102_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-fortran-102:arm64 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-100:arm64. Preparing to unpack .../61-libhdf5-hl-100_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-hl-100:arm64 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-fortran-100:arm64. Preparing to unpack .../62-libhdf5-hl-fortran-100_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-hl-fortran-100:arm64 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-cpp-100:arm64. Preparing to unpack .../63-libhdf5-hl-cpp-100_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-hl-cpp-100:arm64 (1.10.6+repack-4) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../64-zlib1g-dev_1%3a1.2.11.dfsg-2_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.11.dfsg-2) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../65-libjpeg62-turbo_1%3a2.0.6-4_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:2.0.6-4) ... Selecting previously unselected package libjpeg62-turbo-dev:arm64. Preparing to unpack .../66-libjpeg62-turbo-dev_1%3a2.0.6-4_arm64.deb ... Unpacking libjpeg62-turbo-dev:arm64 (1:2.0.6-4) ... Selecting previously unselected package libjpeg-dev:arm64. Preparing to unpack .../67-libjpeg-dev_1%3a2.0.6-4_arm64.deb ... Unpacking libjpeg-dev:arm64 (1:2.0.6-4) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../68-libhdf5-dev_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-dev (1.10.6+repack-4) ... Selecting previously unselected package libnetcdf18:arm64. Preparing to unpack .../69-libnetcdf18_1%3a4.7.4-1_arm64.deb ... Unpacking libnetcdf18:arm64 (1:4.7.4-1) ... Selecting previously unselected package libnetcdf-dev. Preparing to unpack .../70-libnetcdf-dev_1%3a4.7.4-1_arm64.deb ... Unpacking libnetcdf-dev (1:4.7.4-1) ... Selecting previously unselected package libznz3:arm64. Preparing to unpack .../71-libznz3_3.0.1-8_arm64.deb ... Unpacking libznz3:arm64 (3.0.1-8) ... Selecting previously unselected package libnifti2-2:arm64. Preparing to unpack .../72-libnifti2-2_3.0.1-8_arm64.deb ... Unpacking libnifti2-2:arm64 (3.0.1-8) ... Selecting previously unselected package libnifticdf2:arm64. Preparing to unpack .../73-libnifticdf2_3.0.1-8_arm64.deb ... Unpacking libnifticdf2:arm64 (3.0.1-8) ... Selecting previously unselected package libnifticdf-dev:arm64. Preparing to unpack .../74-libnifticdf-dev_3.0.1-8_arm64.deb ... Unpacking libnifticdf-dev:arm64 (3.0.1-8) ... Selecting previously unselected package libniftiio2:arm64. Preparing to unpack .../75-libniftiio2_3.0.1-8_arm64.deb ... Unpacking libniftiio2:arm64 (3.0.1-8) ... Selecting previously unselected package libniftiio-dev:arm64. Preparing to unpack .../76-libniftiio-dev_3.0.1-8_arm64.deb ... Unpacking libniftiio-dev:arm64 (3.0.1-8) ... Selecting previously unselected package libznz-dev:arm64. Preparing to unpack .../77-libznz-dev_3.0.1-8_arm64.deb ... Unpacking libznz-dev:arm64 (3.0.1-8) ... Selecting previously unselected package libnifti2-dev. Preparing to unpack .../78-libnifti2-dev_3.0.1-8_arm64.deb ... Unpacking libnifti2-dev (3.0.1-8) ... Selecting previously unselected package libnifti-dev. Preparing to unpack .../79-libnifti-dev_3.0.1-8_all.deb ... Unpacking libnifti-dev (3.0.1-8) ... Setting up libexpat1:arm64 (2.2.10-2) ... Setting up libpipeline1:arm64 (1.5.3-1) ... Setting up libpsl5:arm64 (0.21.0-1.2) ... Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers (1.10.6+repack-4) ... Setting up libicu67:arm64 (67.1-7) ... Setting up libnifticdf2:arm64 (3.0.1-8) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b2) ... Setting up libnghttp2-14:arm64 (1.43.0-1) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libaec0:arm64 (1.0.4-1) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-2.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libuv1:arm64 (1.40.0-1) ... Setting up libjpeg62-turbo:arm64 (1:2.0.6-4) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.0.6-4) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:arm64 (6.2+20201114-2) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up libnifticdf-dev:arm64 (3.0.1-8) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-2.1) ... Setting up libgfortran5:arm64 (10.2.1-6) ... Setting up libjsoncpp24:arm64 (1.9.4-4) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2) ... Setting up sensible-utils (0.0.14) ... Setting up librhash0:arm64 (1.4.1-2) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libznz3:arm64 (3.0.1-8) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:arm64 (1.9.0-2) ... Setting up cmake-data (3.18.4-2) ... Setting up libelf1:arm64 (0.183-1) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up libprocps8:arm64 (2:3.3.17-5) ... Setting up libsz2:arm64 (1.0.4-1) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:arm64 (3.4.3-2+b1) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up libjpeg-dev:arm64 (1:2.0.6-4) ... Setting up libldap-2.4-2:arm64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up libcurl3-gnutls:arm64 (7.74.0-1.3+b1) ... Setting up libcurl4-gnutls-dev:arm64 (7.74.0-1.3+b1) ... Setting up libniftiio2:arm64 (3.0.1-8) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libznz-dev:arm64 (3.0.1-8) ... Setting up libnifti2-2:arm64 (3.0.1-8) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up libhdf5-103-1:arm64 (1.10.6+repack-4) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up libhdf5-cpp-103-1:arm64 (1.10.6+repack-4) ... Setting up libcurl4:arm64 (7.74.0-1.3+b1) ... Setting up libhdf5-hl-100:arm64 (1.10.6+repack-4) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up libniftiio-dev:arm64 (3.0.1-8) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up libhdf5-hl-cpp-100:arm64 (1.10.6+repack-4) ... Setting up libhdf5-fortran-102:arm64 (1.10.6+repack-4) ... Setting up libnetcdf18:arm64 (1:4.7.4-1) ... Setting up cmake (3.18.4-2) ... Setting up libhdf5-hl-fortran-100:arm64 (1.10.6+repack-4) ... Setting up libnifti2-dev (3.0.1-8) ... Setting up libnifti-dev (3.0.1-8) ... Setting up debhelper (13.3.4) ... Setting up dh-exec (0.23.2) ... Setting up libhdf5-dev (1.10.6+repack-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdf-dev (1:4.7.4-1) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libminc_2.4.03-3_source.changes dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.03-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/libminc-2.4.03' rm -f cmake-modules/*HDF5* dh_auto_configure -- -DLIB_SUFFIX=/aarch64-linux-gnu -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DLIB_SUFFIX=/aarch64-linux-gnu -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found NetCDF headers: /usr/include -- Found NetCDF library: /usr/lib/aarch64-linux-gnu/libnetcdf.so -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Found HDF5: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/aarch64-linux-gnu/libpthread.so;/usr/lib/aarch64-linux-gnu/libsz.so;/usr/lib/aarch64-linux-gnu/libz.so;/usr/lib/aarch64-linux-gnu/libdl.so;/usr/lib/aarch64-linux-gnu/libm.so (found version "1.10.6") found components: C -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for rint -- Looking for rint - found -- Looking for copysign -- Looking for copysign - found -- Looking for round -- Looking for round - found -- Looking for srand48 -- Looking for srand48 - found -- Looking for drand48 -- Looking for drand48 - found -- Looking for sleep -- Looking for sleep - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file sys/ndir.h - not found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file vfork.h -- Looking for include file vfork.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file sys/select.h -- Looking for include file sys/select.h - found -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/libminc-2.4.03/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/libminc-2.4.03' dh_auto_build cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles /build/libminc-2.4.03/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/depend make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2.dir/depend.internal". 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Scanning dependencies of target minc2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build Scanning dependencies of target minc2_static make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 1%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o [ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c [ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o [ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c [ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c [ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c /build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': /build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': /build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': /build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 528 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 554 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': /build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': /build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': /build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': /build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': /build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': /build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ [ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o [ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c /build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': /build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': /build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': /build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 528 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 554 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': /build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': /build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': /build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': /build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': /build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': /build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': /build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': /build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': /build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': /build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': /build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': /build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ [ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o [ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': /build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': /build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': /build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': /build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': /build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': /build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ [ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': /build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 433 | ndims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 496 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 507 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c /build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 677 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': /build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 922 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/hyper.c:16: /build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 980 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': /build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 433 | ndims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 991 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 496 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 507 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 677 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': /build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 922 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/hyper.c:16: /build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 980 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 991 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ [ 6%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o /build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c /build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': /build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ /build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': /build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ /build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': /build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ /build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': /build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ [ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c [ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c /build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': /build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': /build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': /build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': /build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': /build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ [ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c [ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c /build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': /build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': /build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ [ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c /build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': /build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': /build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': /build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': /build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': /build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': /build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ /build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': /build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': /build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ [ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c [ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o [ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c [ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c /build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': /build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': /build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': /build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ [ 11%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c [ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c [ 12%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 132 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': /build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': /build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 634 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 132 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': /build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ /build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': /build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1171 | hdim->offsets = malloc(n_points * sizeof(double)); | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:1173:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1173 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1195 | hdim->widths = malloc(n_points * sizeof(double)); | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:1197:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1197 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': /build/libminc-2.4.03/libsrc2/volume.c:1421:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:1426:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': /build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 634 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ /build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': /build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1171 | hdim->offsets = malloc(n_points * sizeof(double)); | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:1173:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1173 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1195 | hdim->widths = malloc(n_points * sizeof(double)); | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:1197:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1197 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': /build/libminc-2.4.03/libsrc2/volume.c:1421:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: /build/libminc-2.4.03/libsrc2/volume.c:1426:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ [ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c [ 13%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c [ 13%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c [ 13%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c /build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ /build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ [ 14%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c [ 14%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c [ 15%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c [ 16%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': /build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; | ^ /build/libminc-2.4.03/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 244 | ParseLong(argv[srcIndex], &endPtr); | ^~~~~~~~~ /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': /build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ /build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ [ 16%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c /build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] 134 | offset_next = -1; /* Initialize. */ | ^ /build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' 150 | BIT_SET(bitmap, offset_start); | ^~~~~~~ /build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' 204 | BIT_SET(bitmap, offset_next); | ^~~~~~~ [ 16%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: /build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/include/stdio.h:867, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /build/libminc-2.4.03/libsrc2/volume.c:8: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 17%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c [ 18%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o [ 18%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o [ 18%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: /build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/include/stdio.h:867, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /build/libminc-2.4.03/libsrc2/volume.c:8: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': /build/libminc-2.4.03/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; | ^~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:395:42: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 395 | icvp->derv_dim_scale[idim] = 1 + | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c:446:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 446 | ( user_dim_size - | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c:455:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 455 | ( user_dim_size - 1 - | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c:479:30: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 479 | dimstart -= dimstep * (icvp->var_dim_size[idim]-1); | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_get_dim_bufsize_step': /build/libminc-2.4.03/libsrc/dim_conversion.c:518:52: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 518 | icvp->derv_bufsize_step[icvp->var_ndims-1] = icvp->var_vector_size; | ^~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/dim_conversion.c:93: /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ [ 19%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': /build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; | ^ /build/libminc-2.4.03/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 244 | ParseLong(argv[srcIndex], &endPtr); | ^~~~~~~~~ /build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': /build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': /build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miadd_child': /build/libminc-2.4.03/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: /build/libminc-2.4.03/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.03/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 703 | *value = icvp->user_dim_size[0]; break; | ^~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 705 | *value = icvp->user_dim_size[1]; break; | ^~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 728 | *value = icvp->user_dim_size[idim]; | ^~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': /build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': /build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/image_conversion.c:173: /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ [ 19%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c [ 19%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c /build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] 134 | offset_next = -1; /* Initialize. */ | ^ /build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' 150 | BIT_SET(bitmap, offset_start); | ^~~~~~~ /build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) | ^ /build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' 204 | BIT_SET(bitmap, offset_next); | ^~~~~~~ [ 20%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': /build/libminc-2.4.03/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ [ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c [ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c [ 22%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c [ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/value_conversion.c:98: /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 703 | *value = icvp->user_dim_size[0]; break; | ^~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 705 | *value = icvp->user_dim_size[1]; break; | ^~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 728 | *value = icvp->user_dim_size[idim]; | ^~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': /build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': /build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/image_conversion.c:173: /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': /build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miadd_child': /build/libminc-2.4.03/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: /build/libminc-2.4.03/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.03/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ [ 22%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': /build/libminc-2.4.03/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; | ^~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:395:42: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 395 | icvp->derv_dim_scale[idim] = 1 + | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c:446:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 446 | ( user_dim_size - | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c:455:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 455 | ( user_dim_size - 1 - | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c:479:30: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 479 | dimstart -= dimstep * (icvp->var_dim_size[idim]-1); | ^ /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_get_dim_bufsize_step': /build/libminc-2.4.03/libsrc/dim_conversion.c:518:52: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 518 | icvp->derv_bufsize_step[icvp->var_ndims-1] = icvp->var_vector_size; | ^~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/dim_conversion.c:93: /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.03/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 467 | return dim_length; | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_variables': /build/libminc-2.4.03/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 970 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'do_voxel_loop': /build/libminc-2.4.03/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1347 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1714 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_looping': /build/libminc-2.4.03/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1800 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ [ 23%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c [ 23%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: /build/libminc-2.4.03/libsrc/hdf_convenience.c:209:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': /build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 370 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:371:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attname': /build/libminc-2.4.03/libsrc/hdf_convenience.c:455:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 455 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:458:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 458 | status = H5Aget_name(att_id, MAX_NC_NAME, name); | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attinq': /build/libminc-2.4.03/libsrc/hdf_convenience.c:578:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 578 | *length_ptr = typ_size; | ^~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:581:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': /build/libminc-2.4.03/libsrc/hdf_convenience.c:667:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 667 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_dimdef': /build/libminc-2.4.03/libsrc/hdf_convenience.c:958:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 958 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attput': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1147:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1147 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1185:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1185 | hsize_t temp_size = val_len; | ^~~~~~~ [ 23%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vardef': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1322:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1322 | dims[i] = length; | ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1369:60: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: /build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c /build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1381:38: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1381 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1386:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1386 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1418:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1418 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varget': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1534:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1534 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1535:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1535 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varputg': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1633:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1649:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1649 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1658:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1658 | myedges[idim] = edges[idim]; | ^~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1682:29: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1682 | length[idim] = mymap[idim] * myedges[idim]; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1683:45: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1740:16: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1740 | mystart[idim] += mystride[idim]; | ^~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1742:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1742 | mystart[idim] = start[idim]; | ^~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vargetg': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1810:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:39: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:22: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varput': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1957:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1957 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1958:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1958 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varsize': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2069:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 2069 | size_ptr[i] = dims[i]; | ^~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_open': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2239:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2239 | file_id = H5Fopen(path, mode, fpid); | ^~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2249:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2271:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2271 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_create': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2331:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ [ 24%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c /build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': /build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc.h:172, from /build/libminc-2.4.03/libsrc/minc_private.h:83, from /build/libminc-2.4.03/libsrc/minc_simple.c:38: /build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_transform_to_world': /build/libminc-2.4.03/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1026 | input[0] = voxel[spatial_axes[0]]; | ^~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1027 | input[1] = voxel[spatial_axes[1]]; | ^~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1028 | input[2] = voxel[spatial_axes[2]]; | ^~~~~ [ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c [ 25%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c [ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c [ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': /build/libminc-2.4.03/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ [ 26%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c [ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/value_conversion.c:98: /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ [ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c [ 28%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c [ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.03/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 467 | return dim_length; | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_variables': /build/libminc-2.4.03/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 970 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'do_voxel_loop': /build/libminc-2.4.03/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1347 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1714 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_looping': /build/libminc-2.4.03/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1800 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ [ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c [ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c [ 29%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c [ 30%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c [ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c [ 31%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c [ 32%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: /build/libminc-2.4.03/libsrc/hdf_convenience.c:209:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': /build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 370 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:371:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attname': /build/libminc-2.4.03/libsrc/hdf_convenience.c:455:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 455 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:458:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 458 | status = H5Aget_name(att_id, MAX_NC_NAME, name); | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attinq': /build/libminc-2.4.03/libsrc/hdf_convenience.c:578:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 578 | *length_ptr = typ_size; | ^~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:581:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': /build/libminc-2.4.03/libsrc/hdf_convenience.c:667:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 667 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_dimdef': /build/libminc-2.4.03/libsrc/hdf_convenience.c:958:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 958 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attput': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1147:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1147 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1185:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1185 | hsize_t temp_size = val_len; | ^~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vardef': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1322:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1322 | dims[i] = length; | ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1369:60: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: /build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.03/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1381:38: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1381 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1386:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1386 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1418:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1418 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varget': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1534:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1534 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1535:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1535 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varputg': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1633:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1649:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1649 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1658:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1658 | myedges[idim] = edges[idim]; | ^~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1682:29: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1682 | length[idim] = mymap[idim] * myedges[idim]; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1683:45: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1740:16: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1740 | mystart[idim] += mystride[idim]; | ^~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1742:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1742 | mystart[idim] = start[idim]; | ^~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vargetg': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1810:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:39: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:22: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varput': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1957:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1957 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1958:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1958 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varsize': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2069:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 2069 | size_ptr[i] = dims[i]; | ^~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_open': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2239:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2239 | file_id = H5Fopen(path, mode, fpid); | ^~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2249:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2271:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2271 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_create': /build/libminc-2.4.03/libsrc/hdf_convenience.c:2331:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': /build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 32%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c [ 33%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c [ 33%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' 532 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ [ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c [ 33%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c [ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o [ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /build/libminc-2.4.03/libsrc/minc.h:172, from /build/libminc-2.4.03/libsrc/minc_private.h:83, from /build/libminc-2.4.03/libsrc/minc_simple.c:38: /build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_transform_to_world': /build/libminc-2.4.03/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1026 | input[0] = voxel[spatial_axes[0]]; | ^~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1027 | input[1] = voxel[spatial_axes[1]]; | ^~~~~ /build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1028 | input[2] = voxel[spatial_axes[2]]; | ^~~~~ [ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c [ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c [ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c [ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': /build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 222 | progress->n_dots_so_far = n_dots; | ^~~~~~ [ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ [ 38%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c [ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c /build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': /build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ /build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ [ 38%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c [ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c [ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' 238 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' 239 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' 240 | k = VIO_FLOOR( z ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ [ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' 404 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' 405 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' 406 | k = VIO_FLOOR( z ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' 407 | l = VIO_FLOOR( t ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' 408 | m = VIO_FLOOR( v ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' 1010 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ [ 40%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c [ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 613 | slab_size *= file->sizes_in_file[d]; | ^~~~ In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:21: /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' 616 | slab_size *= MIN( file->sizes_in_file[d], | ^~~ [ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c [ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c [ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c [ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c [ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c [ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: /build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); | ^~~~~~~~~ [ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c [ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1473 | slab_size *= count[d]; | ^~~~~ [ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c [ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c [ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o [ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c [ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c [ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ [ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c [ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' 532 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ [ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 499 | slab_size *= file->sizes_in_file[d]; | ^~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ [ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c [ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c [ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1214 | slab_size *= count[d]; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c [ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c [ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c [ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ [ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c /build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': /build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ /build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ /build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': /build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 222 | progress->n_dots_so_far = n_dots; | ^~~~~~ [ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c [ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c [ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c [ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' 238 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' 239 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' 240 | k = VIO_FLOOR( z ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' 404 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' 405 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' 406 | k = VIO_FLOOR( z ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' 407 | l = VIO_FLOOR( t ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' 408 | m = VIO_FLOOR( v ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' 1010 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 613 | slab_size *= file->sizes_in_file[d]; | ^~~~ In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:21: /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' 616 | slab_size *= MIN( file->sizes_in_file[d], | ^~~ [ 56%] Linking C shared library libminc2.so /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: /build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); | ^~~~~~~~~ /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o CMakeFiles/minc2.dir/libsrc2/volume.c.o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o CMakeFiles/minc2.dir/libcommon/minc_config.c.o CMakeFiles/minc2.dir/libcommon/minc_error.c.o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o CMakeFiles/minc2.dir/libcommon/restructure.c.o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lnetcdf -lm -ldl -lnetcdf -ldl -lm -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl [ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c [ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1473 | slab_size *= count[d]; | ^~~~~ /usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 57%] Built target minc2 make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/depend.internal". Scanning dependencies of target minc_io make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 58%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c In file included from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:593:51: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 593 | _info[i].start+=_info[i].step*(dimlength-1); | ~~~~~~~~~~^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:656:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 656 | _slab_len*=_info[_ndims-i-1].length; | ^~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::open(const char*, const minc_info&, int, nc_type, int)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:712:22: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 712 | _ndims=_info.size(); | ~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:746:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 746 | _slab_len*=_info[_ndims-i-1].length; | ^~~~~~ In file included from /build/libminc-2.4.03/ezminc/minc_1_rw.h:21, from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_float()': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:842:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 842 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:843:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 843 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:850:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 850 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:851:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 851 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:857:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 857 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:858:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 858 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_double()': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:918:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 918 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:919:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 919 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:926:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 926 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:927:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 927 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:933:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 933 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:934:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 934 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::append_history(const char*)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1459:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1459 | att_length += strlen(append_history) + 1; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1214 | slab_size *= count[d]; | ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const char*)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1488:76: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1488 | ncattput(_mincid, create_var_id(varname),attname, NC_CHAR, strlen(val) + 1, val); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1493:74: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1493 | ncattput(_mincid, create_var_id(varname),attname, NC_DOUBLE, val.size(), &val[0]); | ~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1498:71: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1498 | ncattput(_mincid, create_var_id(varname),attname, NC_INT, val.size(), &val[0]); | ~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1503:73: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1503 | ncattput(_mincid, create_var_id(varname),attname, NC_SHORT, val.size(), &val[0]); | ~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1508:72: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1508 | ncattput(_mincid, create_var_id(varname),attname, NC_BYTE, val.size(), &val[0]); | ~~~~~~~~^~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 499 | slab_size *= file->sizes_in_file[d]; | ^~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= [ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". Scanning dependencies of target minc2-leak-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 60%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.03/testdir/minc2-leak-test.c /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'check_high_water_mark': /build/libminc-2.4.03/testdir/minc2-leak-test.c:36:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 36 | return usage.ru_maxrss; | ~~~~~^~~~~~~~~~ /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'hdf5_check_objects': /build/libminc-2.4.03/testdir/minc2-leak-test.c:54:24: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 54 | if (cnt <= 0) return cnt; | ^~~ /build/libminc-2.4.03/testdir/minc2-leak-test.c:58:21: warning: conversion to 'long unsigned int' from 'ssize_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 58 | objs = malloc(cnt * sizeof(hid_t)); | ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c:60:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'ssize_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); | ^~~ /build/libminc-2.4.03/testdir/minc2-leak-test.c:60:13: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/testdir/minc2-leak-test.c:67:14: warning: conversion from 'ssize_t' {aka 'long int'} to 'herr_t' {aka 'int'} may change value [-Wconversion] 67 | status = H5Iget_name(anobj, name, 1024); | ^~~~~~~~~~~ /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'leak_loop': /build/libminc-2.4.03/testdir/minc2-leak-test.c:97:13: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 97 | int obj = H5Fget_obj_count(hvol->hdf_id, H5F_OBJ_ALL); | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/testdir/minc2-leak-test.c:113:40: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 113 | buffer = (double *) malloc( n_voxels * sizeof(double)); | ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c:154:15: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 154 | new_obj = H5Fget_obj_count(hvol->hdf_id, H5F_OBJ_ALL); | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'create_test_image': /build/libminc-2.4.03/testdir/minc2-leak-test.c:235:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 235 | buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); | ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c:253:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 253 | start[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-leak-test.c:306:46: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); | ^~~~~ make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". Scanning dependencies of target minc2-read-metadata make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 60%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.03/testdir/minc2-read-metadata.c [ 61%] Linking C executable minc2-leak-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 62%] Linking C executable minc2-read-metadata cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= [ 62%] Built target minc2-leak-test make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". Scanning dependencies of target minc2-vector_dimension-test Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/depend.internal". make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build Scanning dependencies of target minc2-slice-test make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 63%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c [ 64%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.03/testdir/minc2-slice-test.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 64%] Built target minc2-read-metadata make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". Scanning dependencies of target minc2-record-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 131 | coords[3] = i; | ^ /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 166 | coords[0] = i; | ^ make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend /build/libminc-2.4.03/testdir/minc2-slice-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 29 | coords[0] = i; /*Z*/ | ^ /build/libminc-2.4.03/testdir/minc2-slice-test.c:30:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 30 | coords[1] = rand()%CX; /*X*/ | ^~~~ /build/libminc-2.4.03/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 31 | coords[2] = rand()%CY; /*Y*/ | ^~~~ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:18, from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp:18: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; [ 65%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/depend.internal". cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.03/testdir/minc2-record-test.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/depend.internal". Scanning dependencies of target test_mconv make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build Scanning dependencies of target minc_types make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 66%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c [ 66%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c [ 66%] Linking C executable minc2-slice-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 [ 66%] Linking C executable minc2-vector_dimension-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-record-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 85 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-record-test.c:86:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 86 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-record-test.c:87:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 87 | coords[2] = k; | ^ /build/libminc-2.4.03/testdir/minc2-record-test.c:105:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 105 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-record-test.c:106:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 106 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 107 | coords[2] = k; | ^ /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 66%] Linking C executable minc2-record-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 [ 66%] Linking C executable test_mconv cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 67%] Linking C executable minc_types cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/depend.internal". [ 67%] Built target minc2-slice-test Scanning dependencies of target icv_dim make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build [ 67%] Built target minc2-vector_dimension-test make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/depend.internal". [ 67%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/depend.internal". cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". Scanning dependencies of target minc2-volprops-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build Scanning dependencies of target minc2-datatype-test [ 68%] Linking C static library libminc2_static.a make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build /usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 68%] Built target minc2-record-test /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= /usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o [ 68%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.03/testdir/minc2-volprops-test.c /usr/bin/ranlib libminc2_static.a [ 68%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.03/testdir/minc2-datatype-test.c [ 68%] Built target test_mconv make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/depend.internal". make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target minc_conversion make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 68%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/depend.internal". Scanning dependencies of target minc2-read-rgb make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build [ 68%] Built target minc2_static make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= [ 68%] Built target minc_types make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". [ 68%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.03/testdir/minc2-read-rgb.c Scanning dependencies of target minc_long_attr make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/depend.internal". Scanning dependencies of target mincapi make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 68%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c [ 69%] Linking C executable minc2-datatype-test /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test2': /build/libminc-2.4.03/testdir/minc_conversion.c:156:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c:156:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c:156:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test3': /build/libminc-2.4.03/testdir/minc_conversion.c:192:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 192 | total *= dims[i].length; | ^~ cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 [ 69%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o /build/libminc-2.4.03/testdir/minc_conversion.c:263:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c:263:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c:263:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test4': cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.03/testdir/mincapi.c /build/libminc-2.4.03/testdir/minc_conversion.c:368:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] 368 | float tmp = (i * 10000) + (j * 100) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'main': /build/libminc-2.4.03/testdir/minc_conversion.c:414:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 414 | return (errors); | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'calculate_mean_f': /build/libminc-2.4.03/testdir/minc2-read-rgb.c:23:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 23 | return avg/length; | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'calculate_mean_s': /build/libminc-2.4.03/testdir/minc2-read-rgb.c:33:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 33 | return avg/length; | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'calculate_mean_d': /build/libminc-2.4.03/testdir/minc2-read-rgb.c:43:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 43 | return avg/length; | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-read-rgb.c:116:37: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 116 | dim= malloc(sizeof(midimhandle_t)*ndim); | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:117:32: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 117 | sizes=malloc(sizeof(misize_t)*ndim); | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:118:31: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 118 | origin=malloc(sizeof(double)*ndim); | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:119:29: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 119 | step=malloc(sizeof(double)*ndim); | ^ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:129:36: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 129 | r = miget_dimension_sizes ( dim, ndim, sizes ); | ^~~~ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:134:53: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 134 | r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step); | ^~~~ [ 70%] Linking C executable minc2-volprops-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test1': /build/libminc-2.4.03/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 125 | ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); | ~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/testdir/minc_long_attr.c:126:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 126 | memset(ip->large_attribute,'X',ip->attribute_size-1); | ~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test3': /build/libminc-2.4.03/testdir/minc_long_attr.c:207:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 207 | total *= dims[i].length; | ^~ /build/libminc-2.4.03/testdir/minc_long_attr.c:257:14: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 257 | att=malloc(att_length); | ^~~~~~~~~~ /build/libminc-2.4.03/testdir/minc_long_attr.c:262:37: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 262 | if(memcmp(att,ip->large_attribute,att_length)!=0) | ^~~~~~~~~~ [ 71%] Linking C executable icv_dim /build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'main': /build/libminc-2.4.03/testdir/minc_long_attr.c:298:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 298 | return (errors); | ^ cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/mincapi.c: In function 'test3': /build/libminc-2.4.03/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 209 | total *= dims[i].length; | ^~ /build/libminc-2.4.03/testdir/mincapi.c: In function 'test4': /build/libminc-2.4.03/testdir/mincapi.c:269:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 269 | total *= dims[i].length; | ^~ /build/libminc-2.4.03/testdir/mincapi.c:352:14: warning: conversion from 'int' to 'float' may change value [-Wconversion] 352 | float tmp = (i * 10000) + (j * 100) + k; | ^ /build/libminc-2.4.03/testdir/mincapi.c: In function 'test5': /build/libminc-2.4.03/testdir/mincapi.c:409:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 409 | total *= dims[TST_X].length; | ^~ /build/libminc-2.4.03/testdir/mincapi.c:410:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 410 | total *= dims[TST_Y].length + YBOOST; | ^~ /build/libminc-2.4.03/testdir/mincapi.c:411:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 411 | total *= dims[TST_Z].length + ZBOOST; | ^~ /build/libminc-2.4.03/testdir/mincapi.c: In function 'test7': /build/libminc-2.4.03/testdir/mincapi.c:644:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 644 | total *= dims[i].length; | ^~ /build/libminc-2.4.03/testdir/mincapi.c: In function 'main': /build/libminc-2.4.03/testdir/mincapi.c:799:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 799 | return (errors); | ^ make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 71%] Built target icv_dim make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= [ 71%] Built target minc2-datatype-test make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend [ 72%] Linking C executable minc_long_attr cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= [ 73%] Linking C executable minc_conversion cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/depend.internal". Scanning dependencies of target test_xfm /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/depend.internal". make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target icv_range make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 74%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c [ 75%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /build/libminc-2.4.03/testdir/icv_range.c [ 75%] Built target minc2-volprops-test make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/depend.internal". Scanning dependencies of target icv_vec make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 76%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.03/testdir/icv_vec.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 76%] Built target minc_long_attr make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend [ 76%] Linking C executable test_xfm make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 [ 76%] Built target minc_conversion make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". Scanning dependencies of target icv_fillvalue make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". /build/libminc-2.4.03/testdir/icv_vec.c: In function 'test_icv_vector': /build/libminc-2.4.03/testdir/icv_vec.c:65:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 65 | short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); | ^ /build/libminc-2.4.03/testdir/icv_vec.c:66:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 66 | double *dvalue = malloc(N_ELEMENTS * sizeof(double)); | ^ /build/libminc-2.4.03/testdir/icv_vec.c:41:24: warning: conversion from 'int' to 'short int' may change value [-Wconversion] 41 | #define TVAL(z,y,x,v) ((z)*1000+(y)*100+(x)*10+(v)) | ^ /build/libminc-2.4.03/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL' 126 | ivalue[c] = TVAL(i, j, k, v); | ^~~~ Scanning dependencies of target minc2-grpattr-test [ 76%] Linking C executable icv_range make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 76%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.03/testdir/icv_fillvalue.c /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 76%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c [ 76%] Linking C executable minc2-read-rgb cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 77%] Linking C executable mincapi cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 77%] Linking CXX shared library libminc_io.so cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 77%] Linking C executable icv_vec cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 [ 77%] Linking C executable icv_fillvalue cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 [ 77%] Built target test_xfm make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/depend.internal". Scanning dependencies of target minc_tst make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 77%] Built target icv_range make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= [ 77%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c [ 77%] Built target minc2-read-rgb make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/depend.internal". Scanning dependencies of target multidim_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/depend.internal". Scanning dependencies of target minc2-label-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 77%] Built target mincapi /build/libminc-2.4.03/testdir/minc.c: In function 'main': /build/libminc-2.4.03/testdir/minc.c:60:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 60 | ioff=(j*count[1]+i)*count[2]; | ^ make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend [ 78%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o [ 78%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c [ 78%] Linking C executable minc2-grpattr-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= [ 78%] Built target icv_vec [ 78%] Built target minc_io make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". Scanning dependencies of target create_grid_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 79%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 79%] Built target icv_fillvalue make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/depend.internal". Scanning dependencies of target icv make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target verify_xfm make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 79%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c [ 79%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o [ 80%] Linking C executable minc_tst cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/depend.internal". cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 Scanning dependencies of target icv_dim1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build /build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': /build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 110 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 111 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 112 | coords[2] = k; | ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 80%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.03/testdir/icv_dim1.c [ 80%] Linking C executable create_grid_xfm cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf [ 80%] Built target minc2-grpattr-test make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/depend.internal". [ 81%] Linking C executable icv cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 Scanning dependencies of target minc2-convert-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 82%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.03/testdir/minc2-convert-test.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 82%] Built target minc_tst make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= [ 83%] Linking C executable icv_dim1 /build/libminc-2.4.03/testdir/minc2-convert-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 97 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-convert-test.c:98:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 98 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-convert-test.c:99:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 99 | coords[2] = k; | ^ /build/libminc-2.4.03/testdir/minc2-convert-test.c:101:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 101 | voxel[0] = coords[0]; | ^~~~~~ /build/libminc-2.4.03/testdir/minc2-convert-test.c:102:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 102 | voxel[1] = coords[1]; | ^~~~~~ /build/libminc-2.4.03/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 103 | voxel[2] = coords[2]; | ^~~~~~ Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 [ 84%] Linking C executable verify_xfm cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target minc2-multires-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf [ 84%] Built target create_grid_xfm make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 84%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c [ 84%] Linking C executable minc2-label-test Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/depend.internal". [ 84%] Built target icv cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend Scanning dependencies of target minc2-create-test-images-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /build/libminc-2.4.03/testdir/minc2-multires-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 79 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-multires-test.c:80:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 80 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-multires-test.c:81:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 81 | coords[2] = k; | ^ /build/libminc-2.4.03/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 83 | voxel = i*10000 + j*100 + k; | ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". Scanning dependencies of target minc2-create-test-images make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 84%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c [ 84%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 84%] Linking C executable minc2-convert-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 [ 84%] Built target icv_dim1 make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 137 | start[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_4D_image': /build/libminc-2.4.03/testdir/minc2-create-test-images.c:210:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 210 | start[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 212 | start[1] = j; | ^ Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". Scanning dependencies of target test_arg_parse make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 78 | start[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_float_image': /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from 'int' to 'float' may change value [-Wconversion] 143 | buf[i] = i * 0.001f; | ^ /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 154 | start[0] = i; | ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 85%] Linking C executable minc2-multires-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 86%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c [ 86%] Built target verify_xfm make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 87%] Linking C executable minc2-create-test-images cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". Scanning dependencies of target minc2-large-attribute make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build [ 87%] Built target minc2-label-test make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= [ 88%] Linking C executable minc2-create-test-images-2 cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 [ 89%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/depend.internal". [ 89%] Linking C executable test_arg_parse cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target minc2-valid-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 89%] Built target minc2-convert-test make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-large-attribute.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | start[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-large-attribute.c:90:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 90 | attribute=malloc(attribute_size); | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/testdir/minc2-large-attribute.c:91:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 91 | memset(attribute,'Z',attribute_size-1); | ~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 94 | miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); | ^~~~~~~~~~~~~~ make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 90%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.03/testdir/minc2-valid-test.c Scanning dependencies of target minc2-full-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 90%] Built target minc2-multires-test make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= [ 90%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.03/testdir/minc2-full-test.c [ 90%] Linking C executable minc2-large-attribute cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/depend.internal". Scanning dependencies of target volume_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 90%] Built target minc2-create-test-images make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /build/libminc-2.4.03/testdir/minc2-full-test.c: In function 'test1': /build/libminc-2.4.03/testdir/minc2-full-test.c:111:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 111 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:112:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 112 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:113:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 113 | coords[2] = k; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c: In function 'test2': /build/libminc-2.4.03/testdir/minc2-full-test.c:227:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 227 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:228:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 228 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:229:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 229 | coords[2] = k; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:231:30: warning: conversion from 'int' to 'float' may change value [-Wconversion] 231 | fcmpl.real = (i * 100) + j; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:232:30: warning: conversion from 'int' to 'float' may change value [-Wconversion] 232 | fcmpl.imag = k; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:249:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 249 | coords[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:250:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 250 | coords[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-full-test.c:251:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 251 | coords[2] = k; | ^ [ 90%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/depend.internal". [ 90%] Built target minc2-create-test-images-2 make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend Scanning dependencies of target copy_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 90%] Linking C executable minc2-valid-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". Scanning dependencies of target minc2-hyper-test-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 90%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c [ 90%] Linking C executable multidim_test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 [ 91%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 91%] Built target test_arg_parse make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | start[0] = i; | ^ [ 92%] Linking C executable minc2-full-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/depend.internal". Scanning dependencies of target minc2-hyper-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 92%] Built target minc2-large-attribute make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= [ 93%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test.c [ 93%] Linking C executable minc2-hyper-test-2 Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 Scanning dependencies of target create_grid_file make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 94%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp [ 94%] Linking C executable copy_xfm /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'create_and_test_image': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:89:26: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] 89 | stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); | ^ cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/minc2-hyper-test.c:261:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | start[0] = i; | ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:262:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 262 | start[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:263:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 263 | start[2] = k; | ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'test1': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:393:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] 393 | short t = stemp[i][j][k]; | ^~~~~ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:418:31: warning: conversion to 'short int' from 'int' may change the sign of the result [-Wsign-conversion] 418 | short t = stemp[i][j][k] ^ 0x5555; | ^~~~~ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:424:38: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] 424 | stemp[i][j][k] = t; | ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:458:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] 458 | short t = stmp2[i][j][k]; | ^~~~~ [ 94%] Built target multidim_test /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'test3': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 814 | start[0] = i; | ^ make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend /build/libminc-2.4.03/testdir/minc2-hyper-test.c:815:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 815 | start[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 816 | start[2] = k; | ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target volume_msq_dist make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 94%] Built target minc2-valid-test make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= [ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/depend.internal". Scanning dependencies of target volume_avg make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build [ 94%] Built target minc2-full-test make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= [ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". Scanning dependencies of target trilinear_resample make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 95%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 96%] Linking C executable volume_test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 96%] Built target minc2-hyper-test-2 make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend [ 96%] Built target copy_xfm make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend.internal". Scanning dependencies of target ezminc_rw_test2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend.internal". Scanning dependencies of target ezminc_rw_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp In file included from /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:15: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:5: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' In file included from /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:17: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:70:49: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]': /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:72:55: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:70:49: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]' /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:72:55: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] [ 97%] Built target volume_test /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:11: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::vect minc::simple_volume::voxel_to_world(const idx&) const [with T = minc::fixed_vec<3, float>; minc::simple_volume::vect = minc::fixed_vec<3, double>; minc::simple_volume::idx = minc::fixed_vec<3, long unsigned int>]': /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:112:69: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:35: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'long unsigned int' to 'double' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ~~~^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:71: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = minc::fixed_vec<3, float>]': /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:160:9: required from 'minc::simple_volume::simple_volume(size_t, size_t, size_t) [with T = minc::fixed_vec<3, float>; size_t = long unsigned int]' /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:103:45: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ In file included from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:5: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = minc::fixed_vec<3, float>]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = minc::fixed_vec<3, float>]' /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:124:36: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:97:34: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = minc::fixed_vec<3, float>]' /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:124:36: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = minc::fixed_vec<3, float>]' /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:124:36: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:15: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:15: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); | ~~~~^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:80:26: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 186 | _step[i]=0.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 187 | _start[i]=0.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:71: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 327 | size_t x=floor(_x); | ~~~~~^~~~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 328 | size_t y=floor(_y); | ~~~~~^~~~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 329 | size_t z=floor(_z); | ~~~~~^~~~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 331 | float dx=_x-x; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 332 | float dy=_y-y; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 333 | float dz=_z-z; | ^ In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:31:15: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] [ 97%] Linking C executable minc2-hyper-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:1: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from 'int' to 'float' may change value [-Wconversion] 128 | _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); | ~~~~~^~~ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:19: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:98:23: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 186 | _step[i]=0.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 187 | _start[i]=0.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume(const minc::simple_volume&, bool) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:102:31: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:143:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 143 | _size[i]=a._size[i]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:143:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 143 | _size[i]=a._size[i]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume& minc::simple_volume::operator+=(const minc::simple_volume&) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:121:13: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:440:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 440 | if(_size[i]!=a._size[i]) | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:440:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 440 | if(_size[i]!=a._size[i]) | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume& minc::simple_volume::operator*=(const minc::simple_volume&) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:122:13: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:475:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 475 | if(_size[i]!=a._size[i]) | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:475:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 475 | if(_size[i]!=a._size[i]) | ^ In file included from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:18: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:19: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:144:9: required from 'minc::simple_volume::simple_volume(const minc::simple_volume&, bool) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:102:31: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ In file included from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:18: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:132:39: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:132:39: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:7: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 97%] Built target minc2-hyper-test /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 27 | vol(x,y,z)=x+y+z; | ~~~^~ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, unsigned char>::value_type' {aka 'unsigned char'} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:19:26: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 186 | _step[i]=0.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 187 | _start[i]=0.0; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:3: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_non_standard_volume(minc::minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:21:52: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:262:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:262:59: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:263:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 263 | strides[rw.map_space(dimorder[i])]=str; | ~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:264:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 264 | str*=rw.ndim(dimorder[i]); | ~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'size_t minc::simple_volume::dim(size_t) const [with T = float; size_t = long unsigned int]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:23:31: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:366:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 366 | return _size[i]; | ^ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:3: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_non_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:32:52: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:286:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:286:60: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:287:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 287 | strides[rw.map_space(dimorder[i])]=str; | ~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:288:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 288 | str*=rw.ndim(dimorder[i]); | ~~~~~~~~~~^ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:20:51: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:3: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:268:38: required from 'void minc::load_non_standard_volume(minc::minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:21:52: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:8: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = unsigned char]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = int]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] [ 98%] Linking CXX executable volume_msq_dist cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 98%] Built target volume_msq_dist [ 99%] Linking CXX executable ezminc_rw_test2 cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [100%] Linking CXX executable volume_avg cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf [100%] Linking CXX executable create_grid_file cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 [100%] Linking CXX executable trilinear_resample cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [100%] Built target ezminc_rw_test2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [100%] Built target volume_avg make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [100%] Built target create_grid_file [100%] Built target trilinear_resample [100%] Linking CXX executable ezminc_rw_test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [100%] Built target ezminc_rw_test make[2]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/libminc-2.4.03' dh_auto_test --no-parallel cd obj-aarch64-linux-gnu && make -j1 test ARGS\+=-j1 make[2]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process -j1 Test project /build/libminc-2.4.03/obj-aarch64-linux-gnu Start 1: ezminc_rw_test 1/52 Test #1: ezminc_rw_test ................... Passed 0.05 sec Start 2: minc_types-1 2/52 Test #2: minc_types-1 ..................... Passed 0.04 sec Start 3: minc_types-2 3/52 Test #3: minc_types-2 ..................... Passed 0.33 sec Start 4: icv_dim1-1 4/52 Test #4: icv_dim1-1 ....................... Passed 0.02 sec Start 5: icv_dim1-2 5/52 Test #5: icv_dim1-2 ....................... Passed 0.03 sec Start 6: icv_dim-1 6/52 Test #6: icv_dim-1 ........................ Passed 0.02 sec Start 7: icv_dim-2 7/52 Test #7: icv_dim-2 ........................ Passed 0.03 sec Start 8: icv_fillvalue-1 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.02 sec Start 9: icv_fillvalue-2 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.02 sec Start 10: icv_range-1 10/52 Test #10: icv_range-1 ...................... Passed 0.03 sec Start 11: icv_range-2 11/52 Test #11: icv_range-2 ...................... Passed 0.17 sec Start 12: arg_parse 12/52 Test #12: arg_parse ........................ Passed 0.33 sec Start 13: icv 13/52 Test #13: icv .............................. Passed 0.02 sec Start 14: icv_vec 14/52 Test #14: icv_vec .......................... Passed 0.02 sec Start 15: minc 15/52 Test #15: minc ............................. Passed 0.02 sec Start 16: mincapi 16/52 Test #16: mincapi .......................... Passed 0.10 sec Start 17: test_mconv 17/52 Test #17: test_mconv ....................... Passed 0.02 sec Start 18: minc_long_attr_10k 18/52 Test #18: minc_long_attr_10k ............... Passed 0.10 sec Start 19: minc_long_attr_100k 19/52 Test #19: minc_long_attr_100k .............. Passed 0.10 sec Start 20: minc_long_attr_1m 20/52 Test #20: minc_long_attr_1m ................ Passed 0.10 sec Start 21: minc_conversion 21/52 Test #21: minc_conversion .................. Passed 0.12 sec Start 22: volume_test-1 22/52 Test #22: volume_test-1 .................... Passed 3.12 sec Start 23: volume_multidim_test 23/52 Test #23: volume_multidim_test ............. Passed 2.43 sec Start 24: test_xfm_1 24/52 Test #24: test_xfm_1 ....................... Passed 0.02 sec Start 25: test_xfm_2 25/52 Test #25: test_xfm_2 ....................... Passed 0.02 sec Start 26: test_xfm_3 26/52 Test #26: test_xfm_3 ....................... Passed 0.05 sec Start 27: copy_xfm 27/52 Test #27: copy_xfm ......................... Passed 0.04 sec Start 28: verify_xfm_1 28/52 Test #28: verify_xfm_1 ..................... Passed 0.03 sec Start 29: verify_xfm_float 29/52 Test #29: verify_xfm_float ................. Passed 0.04 sec Start 30: verify_xfm_short 30/52 Test #30: verify_xfm_short ................. Passed 0.04 sec Start 31: verify_xfm_byte 31/52 Test #31: verify_xfm_byte .................. Passed 0.04 sec Start 32: verify_xfm_2 32/52 Test #32: verify_xfm_2 ..................... Passed 0.03 sec Start 33: test_arg_parse 33/52 Test #33: test_arg_parse ................... Passed 0.01 sec Start 34: minc2-convert-test 34/52 Test #34: minc2-convert-test ............... Passed 28.35 sec Start 35: minc2-create-test-images 35/52 Test #35: minc2-create-test-images ......... Passed 0.15 sec Start 36: minc2-create-test-images-2 36/52 Test #36: minc2-create-test-images-2 ....... Passed 0.16 sec Start 37: minc2-large-attribute-10k 37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.04 sec Start 38: minc2-large-attribute-100k 38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.04 sec Start 39: minc2-large-attribute-1m 39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.04 sec Start 40: minc2-datatype-test 40/52 Test #40: minc2-datatype-test .............. Passed 5.52 sec Start 41: minc2-full-test 41/52 Test #41: minc2-full-test .................. Passed 2.60 sec Start 42: minc2-grpattr-test 42/52 Test #42: minc2-grpattr-test ............... Passed 0.03 sec Start 43: minc2-hyper-test-2 43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.19 sec Start 44: minc2-hyper-test 44/52 Test #44: minc2-hyper-test ................. Passed 0.07 sec Start 45: minc2-label-test 45/52 Test #45: minc2-label-test ................. Passed 0.03 sec Start 46: minc2-multires-test 46/52 Test #46: minc2-multires-test .............. Passed 6.90 sec Start 47: minc2-record-test 47/52 Test #47: minc2-record-test ................ Passed 0.06 sec Start 48: minc2-slice-test 48/52 Test #48: minc2-slice-test ................. Passed 0.04 sec Start 49: minc2-valid-test 49/52 Test #49: minc2-valid-test ................. Passed 0.04 sec Start 50: minc2-vector_dimension-test 50/52 Test #50: minc2-vector_dimension-test ...... Passed 1.09 sec Start 51: minc2-volprops-test 51/52 Test #51: minc2-volprops-test .............. Passed 0.01 sec Start 52: minc2-leak-test 52/52 Test #52: minc2-leak-test .................. Passed 44.91 sec 100% tests passed, 0 tests failed out of 52 Total Test time (real) = 97.87 sec make[2]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[1]: Leaving directory '/build/libminc-2.4.03' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/libminc-2.4.03/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/libminc2.so.5.2.0 -- Set runtime path of "/build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/libminc2.so.5.2.0" to "" -- Installing: /build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/libminc2.so -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc2.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc2_defs.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc2_structs.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc2_api.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc2_error.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_config.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_error.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/ParseArgv.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/read_file_names.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/restructure.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/time_stamp.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_common_defs.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/voxel_loop.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/nd_loop.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_compat.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_simple.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_format_convert.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/alloc.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/arrays.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/basic.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/def_math.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/files.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/geom_structs.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/geometry.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/multidim.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/progress.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/string_funcs.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/system_dependent.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/transforms.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/vol_io_prototypes.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/volume.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/volume_io/volume_cache.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/UseLIBMINC.cmake -- Installing: /build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/LIBMINCConfig.cmake -- Installing: /build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/libminc_io.so.5.2.0 -- Set runtime path of "/build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/libminc_io.so.5.2.0" to "" -- Installing: /build/libminc-2.4.03/debian/tmp/usr/lib/aarch64-linux-gnu/libminc_io.so -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_io_exceptions.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_io_fixed_vector.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_io_simple_volume.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_1_rw.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_1_simple.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_1_simple_rw.h -- Installing: /build/libminc-2.4.03/debian/tmp/usr/include/minc_io_4d_volume.h make[1]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dwz: debian/libminc2-5.2.0/usr/lib/aarch64-linux-gnu/libminc2.so.5.2.0: DWARF compression not beneficial - old size 468365 new size 484780 dwz: debian/libminc2-5.2.0/usr/lib/aarch64-linux-gnu/libminc_io.so.5.2.0: DWARF compression not beneficial - old size 350496 new size 351412 dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-3_arm64.deb'. dpkg-deb: building package 'libminc2-5.2.0-dbgsym' in '../libminc2-5.2.0-dbgsym_2.4.03-3_arm64.deb'. dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.03-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libminc_2.4.03-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2697 and its subdirectories I: Current time: Thu Jul 8 12:13:45 -12 2021 I: pbuilder-time-stamp: 1625789625 Fri Jul 9 00:13:47 UTC 2021 I: 1st build successful. Starting 2nd build on remote node codethink11-arm64.debian.net. Fri Jul 9 00:13:47 UTC 2021 I: Preparing to do remote build '2' on codethink11-arm64.debian.net. Fri Jul 9 00:17:52 UTC 2021 I: Deleting $TMPDIR on codethink11-arm64.debian.net. Fri Jul 9 00:17:52 UTC 2021 I: libminc_2.4.03-3_arm64.changes: Format: 1.8 Date: Wed, 18 Nov 2020 09:07:03 +0100 Source: libminc Binary: libminc-dev libminc2-5.2.0 libminc2-5.2.0-dbgsym Architecture: arm64 Version: 2.4.03-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libminc-dev - MNI medical image format development environment libminc2-5.2.0 - MNI medical image format library Changes: libminc (2.4.03-3) unstable; urgency=medium . * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- update) * Remove trailing whitespace in debian/changelog (routine-update) * Remove trailing whitespace in debian/control (routine-update) * Remove trailing whitespace in debian/copyright (routine-update) * Remove trailing whitespace in debian/rules (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * No tab in license text (routine-update) * watch file standard 4 (routine-update) Checksums-Sha1: 9921116846fb3b07402b653aff767da89667e196 73776 libminc-dev_2.4.03-3_arm64.deb 00fe265d420e59bffcc22b9dc822397481f7cb5a 697276 libminc2-5.2.0-dbgsym_2.4.03-3_arm64.deb a0e74b511a5ef251b9a909681030e15a266f3858 210648 libminc2-5.2.0_2.4.03-3_arm64.deb 4b71b884887f4186983d8e7eee9fb26b6ba5975e 6842 libminc_2.4.03-3_arm64.buildinfo Checksums-Sha256: cbb3619905e9aa9483dfc615813d707eecd5d5aec3c6d79db580df56ac749559 73776 libminc-dev_2.4.03-3_arm64.deb aaa11b3cbf074f5254647a2a0a02c334b40412039f4a4f398bcf556b72ba4bf4 697276 libminc2-5.2.0-dbgsym_2.4.03-3_arm64.deb b98bc4a9d6234a52498dcceb8f1b93fc0826303de7392ab8eb5f7f7d4f6560c2 210648 libminc2-5.2.0_2.4.03-3_arm64.deb 0fb7677a3feba68c1934151c2bc082a4f01378fa8ece07bb4af0b691037e9b79 6842 libminc_2.4.03-3_arm64.buildinfo Files: 023224a0058edfd5120bb92484eeb1a9 73776 libdevel optional libminc-dev_2.4.03-3_arm64.deb cacf0ee7926598a686bf294daba820e9 697276 debug optional libminc2-5.2.0-dbgsym_2.4.03-3_arm64.deb 1206bda20e8fc1e43861ef12fba171d6 210648 libs optional libminc2-5.2.0_2.4.03-3_arm64.deb 6c65c13335ff323afa28e3b12c0d462e 6842 science optional libminc_2.4.03-3_arm64.buildinfo Fri Jul 9 00:17:54 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/libminc_2.4.03-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/libminc_2.4.03-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/libminc_2.4.03-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/b1/libminc_2.4.03-3_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/b2/libminc_2.4.03-3_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.292s) 0.292s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.037s) 0.037s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Fri Jul 9 00:17:56 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Fri Jul 9 00:17:56 UTC 2021 I: libminc from bullseye built successfully and reproducibly on arm64. Fri Jul 9 00:17:57 UTC 2021 I: Submitting .buildinfo files to external archives: Fri Jul 9 00:17:57 UTC 2021 I: Submitting 8.0K b1/libminc_2.4.03-3_arm64.buildinfo.asc Fri Jul 9 00:17:58 UTC 2021 I: Submitting 8.0K b2/libminc_2.4.03-3_arm64.buildinfo.asc Fri Jul 9 00:17:59 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Jul 9 00:17:59 UTC 2021 I: Done submitting .buildinfo files. Fri Jul 9 00:17:59 UTC 2021 I: Removing signed libminc_2.4.03-3_arm64.buildinfo.asc files: removed './b1/libminc_2.4.03-3_arm64.buildinfo.asc' removed './b2/libminc_2.4.03-3_arm64.buildinfo.asc'