Sun Apr 30 22:00:03 UTC 2023 I: starting to build ont-fast5-api/bookworm/arm64 on jenkins on '2023-04-30 21:59' Sun Apr 30 22:00:03 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_30/3997/console.log Sun Apr 30 22:00:03 UTC 2023 I: Downloading source for bookworm/ont-fast5-api=4.1.1+dfsg-2 --2023-04-30 22:00:03-- http://cdn-fastly.deb.debian.org/debian/pool/main/o/ont-fast5-api/ont-fast5-api_4.1.1%2bdfsg-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1619 (1.6K) [text/prs.lines.tag] Saving to: ‘ont-fast5-api_4.1.1+dfsg-2.dsc’ 0K . 100% 120M=0s 2023-04-30 22:00:03 (120 MB/s) - ‘ont-fast5-api_4.1.1+dfsg-2.dsc’ saved [1619/1619] Sun Apr 30 22:00:03 UTC 2023 I: ont-fast5-api_4.1.1+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: ont-fast5-api Binary: ont-fast5-api Architecture: any Version: 4.1.1+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Nilesh Patra Homepage: https://github.com/nanoporetech/ont_fast5_api/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/ont-fast5-api Vcs-Git: https://salsa.debian.org/med-team/ont-fast5-api.git Testsuite: autopkgtest Testsuite-Triggers: python3-all Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-setuptools, python3-h5py, python3-numpy, python3-six, python3-progressbar, python3-packaging, libvbz-hdf-plugin-dev Package-List: ont-fast5-api deb science optional arch=any Checksums-Sha1: 2db5db27f668157c00eda939943f6474fdb0be35 1383712 ont-fast5-api_4.1.1+dfsg.orig.tar.xz 3c13da3792d8a1730c17acbddebc6d7cdb2a1207 4184 ont-fast5-api_4.1.1+dfsg-2.debian.tar.xz Checksums-Sha256: b0183ff1652ce5ab8f7a437f589f595c2eafa01d13179fadda69caf4a1e47219 1383712 ont-fast5-api_4.1.1+dfsg.orig.tar.xz fa8814e71ff237babcc530c9225d430038e8e99d4736a5a24bc7aaa64ac71e7e 4184 ont-fast5-api_4.1.1+dfsg-2.debian.tar.xz Files: d8435813d5a4a2ee5ec22db6ec4e515a 1383712 ont-fast5-api_4.1.1+dfsg.orig.tar.xz 22f9c767511cef47ebe0bdf17acad7ed 4184 ont-fast5-api_4.1.1+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iHUEARYIAB0WIQSglbZu4JAkvuai8HIqJ5BL1yQ+2gUCY61msgAKCRAqJ5BL1yQ+ 2pVEAQDqPDBFb5mfDtrQVCGNtCYzEjYW89jxW7KTCPH5BeeDTwEAzYXX4p/ojWRt cauXDAXMyFLSe7xJFxGXzE4yCQ0uyAU= =YX9h -----END PGP SIGNATURE----- Sun Apr 30 22:00:03 UTC 2023 I: Checking whether the package is not for us Sun Apr 30 22:00:03 UTC 2023 I: Starting 1st build on remote node codethink16-arm64.debian.net. Sun Apr 30 22:00:03 UTC 2023 I: Preparing to do remote build '1' on codethink16-arm64.debian.net. Sun Apr 30 22:01:25 UTC 2023 I: Deleting $TMPDIR on codethink16-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Apr 30 10:00:08 -12 2023 I: pbuilder-time-stamp: 1682892008 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ont-fast5-api_4.1.1+dfsg-2.dsc] I: copying [./ont-fast5-api_4.1.1+dfsg.orig.tar.xz] I: copying [./ont-fast5-api_4.1.1+dfsg-2.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Dec 28 22:06:42 2022 -12 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./ont-fast5-api_4.1.1+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting ont-fast5-api in ont-fast5-api-4.1.1+dfsg dpkg-source: info: unpacking ont-fast5-api_4.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking ont-fast5-api_4.1.1+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_python_syntax.patch dpkg-source: info: applying disable-tests-needing-root.patch dpkg-source: info: applying progressbar.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/30298/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='30298' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RJGiuLZE/pbuilderrc_VpFG --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RJGiuLZE/b1 --logfile b1/build.log ont-fast5-api_4.1.1+dfsg-2.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink16-arm64 4.15.0-210-generic #221-Ubuntu SMP Tue Apr 18 08:32:48 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 25 22:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/30298/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-setuptools, python3-h5py, python3-numpy, python3-six, python3-progressbar, python3-packaging, libvbz-hdf-plugin-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-six; however: Package python3-six is not installed. pbuilder-satisfydepends-dummy depends on python3-progressbar; however: Package python3-progressbar is not installed. pbuilder-satisfydepends-dummy depends on python3-packaging; however: Package python3-packaging is not installed. pbuilder-satisfydepends-dummy depends on libvbz-hdf-plugin-dev; however: Package libvbz-hdf-plugin-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-hl-100{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} libldap-2.5-0{a} liblzf1{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libvbz-hdf-plugin-dev{a} libvbz-hdf-plugin0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-dev{a} python3-distutils{a} python3-h5py{a} python3-h5py-serial{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-progressbar{a} python3-setuptools{a} python3-six{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 84 newly installed, 0 to remove and 0 not upgraded. Need to get 43.4 MB of archives. After unpacking 188 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-minimal arm64 3.11.2-6 [806 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 python3.11-minimal arm64 3.11.2-6 [1858 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 python3-minimal arm64 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 libreadline8 arm64 8.2-1.3 [155 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-stdlib arm64 3.11.2-6 [1747 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 python3.11 arm64 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 libpython3-stdlib arm64 3.11.2-1+b1 [9296 B] Get: 11 http://deb.debian.org/debian bookworm/main arm64 python3 arm64 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 32 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 34 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 41 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 42 http://deb.debian.org/debian bookworm/main arm64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 43 http://deb.debian.org/debian bookworm/main arm64 python3-distutils all 3.11.2-2 [131 kB] Get: 44 http://deb.debian.org/debian bookworm/main arm64 dh-python all 5.20230130 [104 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 libaec0 arm64 1.0.6-1+b1 [19.9 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 libblas3 arm64 3.11.0-2 [91.4 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 53 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 54 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 55 http://deb.debian.org/debian bookworm/main arm64 libcurl4 arm64 7.88.1-9 [362 kB] Get: 56 http://deb.debian.org/debian bookworm/main arm64 libexpat1-dev arm64 2.5.0-1 [135 kB] Get: 57 http://deb.debian.org/debian bookworm/main arm64 libgfortran5 arm64 12.2.0-14 [340 kB] Get: 58 http://deb.debian.org/debian bookworm/main arm64 libsz2 arm64 1.0.6-1+b1 [7740 B] Get: 59 http://deb.debian.org/debian bookworm/main arm64 libhdf5-103-1 arm64 1.10.8+repack1-1 [1037 kB] Get: 60 http://deb.debian.org/debian bookworm/main arm64 libhdf5-hl-100 arm64 1.10.8+repack1-1 [64.0 kB] Get: 61 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 62 http://deb.debian.org/debian bookworm/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 63 http://deb.debian.org/debian bookworm/main arm64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 64 http://deb.debian.org/debian bookworm/main arm64 liblapack3 arm64 3.11.0-2 [1664 kB] Get: 65 http://deb.debian.org/debian bookworm/main arm64 liblzf1 arm64 3.6-3 [9860 B] Get: 66 http://deb.debian.org/debian bookworm/main arm64 libpython3.11 arm64 3.11.2-6 [1841 kB] Get: 67 http://deb.debian.org/debian bookworm/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1 [913 kB] Get: 68 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-dev arm64 3.11.2-6 [4395 kB] Get: 69 http://deb.debian.org/debian bookworm/main arm64 libpython3-dev arm64 3.11.2-1+b1 [9564 B] Get: 70 http://deb.debian.org/debian bookworm/main arm64 libpython3-all-dev arm64 3.11.2-1+b1 [1068 B] Get: 71 http://deb.debian.org/debian bookworm/main arm64 libvbz-hdf-plugin0 arm64 1.0.2-2 [17.1 kB] Get: 72 http://deb.debian.org/debian bookworm/main arm64 libvbz-hdf-plugin-dev arm64 1.0.2-2 [14.7 kB] Get: 73 http://deb.debian.org/debian bookworm/main arm64 python3-all arm64 3.11.2-1+b1 [1064 B] Get: 74 http://deb.debian.org/debian bookworm/main arm64 python3.11-dev arm64 3.11.2-6 [617 kB] Get: 75 http://deb.debian.org/debian bookworm/main arm64 python3-dev arm64 3.11.2-1+b1 [26.2 kB] Get: 76 http://deb.debian.org/debian bookworm/main arm64 python3-all-dev arm64 3.11.2-1+b1 [1076 B] Get: 77 http://deb.debian.org/debian bookworm/main arm64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 78 http://deb.debian.org/debian bookworm/main arm64 python3-numpy arm64 1:1.24.2-1 [4751 kB] Get: 79 http://deb.debian.org/debian bookworm/main arm64 python3-h5py-serial arm64 3.7.0-8 [734 kB] Get: 80 http://deb.debian.org/debian bookworm/main arm64 python3-h5py all 3.7.0-8 [10.3 kB] Get: 81 http://deb.debian.org/debian bookworm/main arm64 python3-packaging all 23.0-1 [32.5 kB] Get: 82 http://deb.debian.org/debian bookworm/main arm64 python3-progressbar all 2.5-3 [11.6 kB] Get: 83 http://deb.debian.org/debian bookworm/main arm64 python3-setuptools all 66.1.1-1 [521 kB] Get: 84 http://deb.debian.org/debian bookworm/main arm64 python3-six all 1.16.0-4 [17.5 kB] Fetched 43.4 MB in 1s (43.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.2-6) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.5.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_arm64.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:arm64 (3.11.2-6) ... Setting up libexpat1:arm64 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19932 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_arm64.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../3-libreadline8_8.2-1.3_arm64.deb ... Unpacking libreadline8:arm64 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_arm64.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20366 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.2-1+b1_arm64.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../23-libelf1_0.188-2.1_arm64.deb ... Unpacking libelf1:arm64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../25-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-12_arm64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../31-python3-lib2to3_3.11.2-2_all.deb ... Unpacking python3-lib2to3 (3.11.2-2) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../32-python3-distutils_3.11.2-2_all.deb ... Unpacking python3-distutils (3.11.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../33-dh-python_5.20230130_all.deb ... Unpacking dh-python (5.20230130) ... Selecting previously unselected package libaec0:arm64. Preparing to unpack .../34-libaec0_1.0.6-1+b1_arm64.deb ... Unpacking libaec0:arm64 (1.0.6-1+b1) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../35-libblas3_3.11.0-2_arm64.deb ... Unpacking libblas3:arm64 (3.11.0-2) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../36-libbrotli1_1.0.9-2+b6_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../37-libsasl2-modules-db_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../38-libsasl2-2_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../39-libldap-2.5-0_2.5.13+dfsg-5_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../40-libnghttp2-14_1.52.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.52.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../41-libpsl5_0.21.2-1_arm64.deb ... Unpacking libpsl5:arm64 (0.21.2-1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../42-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../43-libssh2-1_1.10.0-3+b1_arm64.deb ... Unpacking libssh2-1:arm64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../44-libcurl4_7.88.1-9_arm64.deb ... Unpacking libcurl4:arm64 (7.88.1-9) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../45-libexpat1-dev_2.5.0-1_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.5.0-1) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../46-libgfortran5_12.2.0-14_arm64.deb ... Unpacking libgfortran5:arm64 (12.2.0-14) ... Selecting previously unselected package libsz2:arm64. Preparing to unpack .../47-libsz2_1.0.6-1+b1_arm64.deb ... Unpacking libsz2:arm64 (1.0.6-1+b1) ... Selecting previously unselected package libhdf5-103-1:arm64. Preparing to unpack .../48-libhdf5-103-1_1.10.8+repack1-1_arm64.deb ... Unpacking libhdf5-103-1:arm64 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-hl-100:arm64. Preparing to unpack .../49-libhdf5-hl-100_1.10.8+repack1-1_arm64.deb ... Unpacking libhdf5-hl-100:arm64 (1.10.8+repack1-1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../50-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../51-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../52-libjs-sphinxdoc_5.3.0-4_all.deb ... Unpacking libjs-sphinxdoc (5.3.0-4) ... Selecting previously unselected package liblapack3:arm64. Preparing to unpack .../53-liblapack3_3.11.0-2_arm64.deb ... Unpacking liblapack3:arm64 (3.11.0-2) ... Selecting previously unselected package liblzf1:arm64. Preparing to unpack .../54-liblzf1_3.6-3_arm64.deb ... Unpacking liblzf1:arm64 (3.6-3) ... Selecting previously unselected package libpython3.11:arm64. Preparing to unpack .../55-libpython3.11_3.11.2-6_arm64.deb ... Unpacking libpython3.11:arm64 (3.11.2-6) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../56-zlib1g-dev_1%3a1.2.13.dfsg-1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.13.dfsg-1) ... Selecting previously unselected package libpython3.11-dev:arm64. Preparing to unpack .../57-libpython3.11-dev_3.11.2-6_arm64.deb ... Unpacking libpython3.11-dev:arm64 (3.11.2-6) ... Selecting previously unselected package libpython3-dev:arm64. Preparing to unpack .../58-libpython3-dev_3.11.2-1+b1_arm64.deb ... Unpacking libpython3-dev:arm64 (3.11.2-1+b1) ... Selecting previously unselected package libpython3-all-dev:arm64. Preparing to unpack .../59-libpython3-all-dev_3.11.2-1+b1_arm64.deb ... Unpacking libpython3-all-dev:arm64 (3.11.2-1+b1) ... Selecting previously unselected package libvbz-hdf-plugin0:arm64. Preparing to unpack .../60-libvbz-hdf-plugin0_1.0.2-2_arm64.deb ... Unpacking libvbz-hdf-plugin0:arm64 (1.0.2-2) ... Selecting previously unselected package libvbz-hdf-plugin-dev:arm64. Preparing to unpack .../61-libvbz-hdf-plugin-dev_1.0.2-2_arm64.deb ... Unpacking libvbz-hdf-plugin-dev:arm64 (1.0.2-2) ... Selecting previously unselected package python3-all. Preparing to unpack .../62-python3-all_3.11.2-1+b1_arm64.deb ... Unpacking python3-all (3.11.2-1+b1) ... Selecting previously unselected package python3.11-dev. Preparing to unpack .../63-python3.11-dev_3.11.2-6_arm64.deb ... Unpacking python3.11-dev (3.11.2-6) ... Selecting previously unselected package python3-dev. Preparing to unpack .../64-python3-dev_3.11.2-1+b1_arm64.deb ... Unpacking python3-dev (3.11.2-1+b1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../65-python3-all-dev_3.11.2-1+b1_arm64.deb ... Unpacking python3-all-dev (3.11.2-1+b1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../66-python3-pkg-resources_66.1.1-1_all.deb ... Unpacking python3-pkg-resources (66.1.1-1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../67-python3-numpy_1%3a1.24.2-1_arm64.deb ... Unpacking python3-numpy (1:1.24.2-1) ... Selecting previously unselected package python3-h5py-serial. Preparing to unpack .../68-python3-h5py-serial_3.7.0-8_arm64.deb ... Unpacking python3-h5py-serial (3.7.0-8) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../69-python3-h5py_3.7.0-8_all.deb ... Unpacking python3-h5py (3.7.0-8) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../70-python3-packaging_23.0-1_all.deb ... Unpacking python3-packaging (23.0-1) ... Selecting previously unselected package python3-progressbar. Preparing to unpack .../71-python3-progressbar_2.5-3_all.deb ... Unpacking python3-progressbar (2.5-3) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../72-python3-setuptools_66.1.1-1_all.deb ... Unpacking python3-setuptools (66.1.1-1) ... Selecting previously unselected package python3-six. Preparing to unpack .../73-python3-six_1.16.0-4_all.deb ... Unpacking python3-six (1.16.0-4) ... Setting up media-types (10.0.0) ... Setting up libpipeline1:arm64 (1.5.7-1) ... Setting up libpsl5:arm64 (0.21.2-1) ... Setting up libicu72:arm64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b6) ... Setting up libnghttp2-14:arm64 (1.52.0-1) ... Setting up libmagic1:arm64 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libaec0:arm64 (1.0.6-1+b1) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Setting up libvbz-hdf-plugin0:arm64 (1.0.2-2) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:arm64 (3.11.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.5.0-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up liblzf1:arm64 (3.6-3) ... Setting up autopoint (0.21-12) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg-10) ... Setting up libgfortran5:arm64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:arm64 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:arm64 (1.10.0-3+b1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.2) ... Setting up libsz2:arm64 (1.0.6-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblapack3:arm64 (3.11.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.21-12) ... Setting up libvbz-hdf-plugin-dev:arm64 (1.0.2-2) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:arm64 (8.2-1.3) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libcurl4:arm64 (7.88.1-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.2-6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libhdf5-103-1:arm64 (1.10.8+repack1-1) ... Setting up libpython3-stdlib:arm64 (3.11.2-1+b1) ... Setting up libhdf5-hl-100:arm64 (1.10.8+repack1-1) ... Setting up python3.11 (3.11.2-6) ... Setting up libpython3.11:arm64 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-six (1.16.0-4) ... Setting up python3-progressbar (2.5-3) ... Setting up python3-packaging (23.0-1) ... Setting up libpython3.11-dev:arm64 (3.11.2-6) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up libpython3-dev:arm64 (3.11.2-1+b1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3.11-dev (3.11.2-6) ... Setting up python3-all (3.11.2-1+b1) ... Setting up libpython3-all-dev:arm64 (3.11.2-1+b1) ... Setting up python3-dev (3.11.2-1+b1) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up python3-all-dev (3.11.2-1+b1) ... Setting up python3-h5py-serial (3.7.0-8) ... Setting up python3-h5py (3.7.0-8) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/ont-fast5-api-4.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ont-fast5-api_4.1.1+dfsg-2_source.changes dpkg-buildpackage: info: source package ont-fast5-api dpkg-buildpackage: info: source version 4.1.1+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py clean running clean removing '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild debian/rules execute_before_dh_auto_configure make[1]: Entering directory '/build/ont-fast5-api-4.1.1+dfsg' mkdir -p /build/ont-fast5-api-4.1.1+dfsg/ont_fast5_api/vbz_plugin ln -s /usr/lib/aarch64-linux-gnu/libvbz_hdf_plugin.so /build/ont-fast5-api-4.1.1+dfsg/ont_fast5_api/vbz_plugin/libvbz_hdf_plugin.so make[1]: Leaving directory '/build/ont-fast5-api-4.1.1+dfsg' dh_auto_configure -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py build running build running build_py creating /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/fast5_file.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/multi_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/data_sanitisation.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/fast5_read.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/compression_settings.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/helpers.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/fast5_info.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/fast5_interface.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api copying ont_fast5_api/static_data.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api creating /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_fast5_converter.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_compress_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_check_compression.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_fast5_subset.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_alignment_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_fast5_file.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_basecall_2d_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_demux_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_event_detection_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/helpers.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_fast5_conversion_utils.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_hardlink_metadata.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_fast5_interface.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_segmentation_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_basecall_1d_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_data_sanitisation.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_compression_settings.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test copying test/test_multi_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test creating /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/conversion_utils.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/demux_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/multi_to_single_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/check_file_compression.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/compress_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/single_to_multi_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools copying ont_fast5_api/conversion_tools/fast5_subset.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools creating /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools copying ont_fast5_api/analysis_tools/segmentation.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools copying ont_fast5_api/analysis_tools/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools copying ont_fast5_api/analysis_tools/basecall_2d.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools copying ont_fast5_api/analysis_tools/alignment.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools copying ont_fast5_api/analysis_tools/base_tool.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools copying ont_fast5_api/analysis_tools/event_detection.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools copying ont_fast5_api/analysis_tools/basecall_1d.py -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools creating /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/vbz_plugin copying ont_fast5_api/vbz_plugin/libvbz_hdf_plugin.so -> /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/vbz_plugin dh_auto_test -O--buildsystem=pybuild I: pybuild pybuild:307: cp -av /build/ont-fast5-api-4.1.1+dfsg/test/data /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test '/build/ont-fast5-api-4.1.1+dfsg/test/data' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data' '/build/ont-fast5-api-4.1.1+dfsg/test/data/single_reads' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads' '/build/ont-fast5-api-4.1.1+dfsg/test/data/single_reads/read0.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/read0.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/single_reads/fe9374ee-b86a-4ca4-81dc-ac06e3297728.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/fe9374ee-b86a-4ca4-81dc-ac06e3297728.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/single_reads/fe85b517-62ee-4a33-8767-41cab5d5ab39.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/fe85b517-62ee-4a33-8767-41cab5d5ab39.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/single_reads/fe8a3026-d1f4-46b3-8daa-e610f27acde1.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/fe8a3026-d1f4-46b3-8daa-e610f27acde1.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/rle_basecall_table' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/rle_basecall_table' '/build/ont-fast5-api-4.1.1+dfsg/test/data/rle_basecall_table/rle_example.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/rle_basecall_table/rle_example.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/read_file_v1.0_single.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/read_file_v1.0_single.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/multi_read' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/multi_read' '/build/ont-fast5-api-4.1.1+dfsg/test/data/multi_read/batch_0.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/multi_read/batch_0.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/summaries' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/summaries' '/build/ont-fast5-api-4.1.1+dfsg/test/data/summaries/two_barcode_summary.txt' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/summaries/two_barcode_summary.txt' '/build/ont-fast5-api-4.1.1+dfsg/test/data/single_read_analyses' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_read_analyses' '/build/ont-fast5-api-4.1.1+dfsg/test/data/single_read_analyses/read.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_read_analyses/read.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/telemetry_test.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/telemetry_test.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/read_file_v0.6_single.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/read_file_v0.6_single.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/vbz_reads' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/vbz_reads' '/build/ont-fast5-api-4.1.1+dfsg/test/data/vbz_reads/vbz_reads.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/vbz_reads/vbz_reads.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/unlinked' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/unlinked' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/unlinked/batch0.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/unlinked/batch0.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/002ad0e4-c6bb-4eff-a30f-5fec01475ab8.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/002ad0e4-c6bb-4eff-a30f-5fec01475ab8.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/00031f3e-415c-4ab5-9c16-fb6fe45ff519.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/00031f3e-415c-4ab5-9c16-fb6fe45ff519.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/000ebd63-3e1a-4499-9ded-26af3225a022.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/000ebd63-3e1a-4499-9ded-26af3225a022.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/0048058c-ecb4-4a0f-b283-9a128bd598c5.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/0048058c-ecb4-4a0f-b283-9a128bd598c5.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/000c0b4e-46c2-4fb5-9b17-d7031eefb975.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/000c0b4e-46c2-4fb5-9b17-d7031eefb975.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/004a87b0-c9f6-4237-b4d6-466ab979aee2.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/004a87b0-c9f6-4237-b4d6-466ab979aee2.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/002b0891-03bf-4622-ae66-ae6984890ed4.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/002b0891-03bf-4622-ae66-ae6984890ed4.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/hardlink/single_reads/0059d270-3238-4413-b38b-f588e28326df.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/0059d270-3238-4413-b38b-f588e28326df.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/read_file_v0.6_raw.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/read_file_v0.6_raw.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/basecall_2d_file_v1.0.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/basecall_2d_file_v1.0.fast5' '/build/ont-fast5-api-4.1.1+dfsg/test/data/multi_read_analyses' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/multi_read_analyses' '/build/ont-fast5-api-4.1.1+dfsg/test/data/multi_read_analyses/batch_0.fast5' -> '/build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/multi_read_analyses/batch_0.fast5' I: pybuild base:240: cd /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build; python3.11 -m unittest discover -v test_001_put_and_retrieve (test.test_alignment_tools.TestAlignmentTools.test_001_put_and_retrieve) ... ok test_001_put_and_retrieve (test.test_basecall_1d_tools.TestBasecall1DTools.test_001_put_and_retrieve) ... ok test_001_put_and_retrieve (test.test_basecall_2d_tools.TestBasecall2DTools.test_001_put_and_retrieve) ... ok test_check_multi_read (test.test_check_compression.TestCheckCompression.test_check_multi_read) ... ok test_check_read_compression_multi_read (test.test_check_compression.TestCheckCompression.test_check_read_compression_multi_read) ... ok test_check_read_compression_single_read (test.test_check_compression.TestCheckCompression.test_check_read_compression_single_read) ... ok test_check_read_compression_vbz (test.test_check_compression.TestCheckCompression.test_check_read_compression_vbz) ... ok test_check_single_read_folder (test.test_check_compression.TestCheckCompression.test_check_single_read_folder) ... ok test_multi_to_multi (test.test_compress_fast5.TestSanitise.test_multi_to_multi) ... ok test_single_to_multi (test.test_compress_fast5.TestSanitise.test_single_to_multi) ... ok test_add_read_from_multi (test.test_compress_fast5.TestVbzConvert.test_add_read_from_multi) ... ok test_compress_in_place (test.test_compress_fast5.TestVbzConvert.test_compress_in_place) ... skipped 'Permission Denied - to open folder' test_compress_read_from_single (test.test_compress_fast5.TestVbzConvert.test_compress_read_from_single) ... ok test_conversion_script_multi (test.test_compress_fast5.TestVbzConvert.test_conversion_script_multi) ... skipped 'Permission Denied - to open folder' test_conversion_script_multi_retains_end_reason_enumeration (test.test_compress_fast5.TestVbzConvert.test_conversion_script_multi_retains_end_reason_enumeration) Test that given a collection of multi read fast5 files that undergo compression ... ok test_conversion_script_single (test.test_compress_fast5.TestVbzConvert.test_conversion_script_single) ... skipped 'Permission Denied - to open folder' test_conversion_script_single_retains_end_reason_enumeration (test.test_compress_fast5.TestVbzConvert.test_conversion_script_single_retains_end_reason_enumeration) Test that given a collection of single read fast5 files that undergo compression ... ok test_read_vbz_using_api (test.test_compress_fast5.TestVbzReadWrite.test_read_vbz_using_api) ... ok test_write_vbz_directly (test.test_compress_fast5.TestVbzReadWrite.test_write_vbz_directly) ... skipped 'Tries to create dataset - permission denied' test_write_vbz_using_api (test.test_compress_fast5.TestVbzReadWrite.test_write_vbz_using_api) ... ok test_write_vbz_using_api_single_read (test.test_compress_fast5.TestVbzReadWrite.test_write_vbz_using_api_single_read) ... ok test_register_plugin_no_prepend (test.test_compression_settings.TestCheckCompression.test_register_plugin_no_prepend) ... ok test__clean (test.test_data_sanitisation.TestDataSanitisation.test__clean) ... ok test__sanitize_data (test.test_data_sanitisation.TestDataSanitisation.test__sanitize_data) ... ok test__sanitize_data_emptystrings (test.test_data_sanitisation.TestDataSanitisation.test__sanitize_data_emptystrings) ... ok test_real_example_file (test.test_data_sanitisation.TestDataSanitisation.test_real_example_file) ... ok test_sanitise_array_empty_string (test.test_data_sanitisation.TestDataSanitisation.test_sanitise_array_empty_string) ... ok test_demux_1t (test.test_demux_fast5.TestDemuxFast5.test_demux_1t) ... ok test_demux_8t (test.test_demux_fast5.TestDemuxFast5.test_demux_8t) ... ok test_parse_summary (test.test_demux_fast5.TestDemuxFast5.test_parse_summary) ... ok test_001_read_events (test.test_event_detection_tools.TestEventDetectionTools.test_001_read_events) ... /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/event_detection.py:84: H5pyDeprecationWarning: Using astype() as a context manager is deprecated. Slice the returned object instead, like: ds.astype(np.int32)[:10] with dataset.astype(np.dtype(descr)): ok test_002_write_events (test.test_event_detection_tools.TestEventDetectionTools.test_002_write_events) ... ok test_yield_fast5_files_from_dir (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_files_from_dir) ... ok test_yield_fast5_files_from_fast5_file (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_files_from_fast5_file) ... ok test_yield_fast5_reads_from_dir (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_from_dir) ... ok test_yield_fast5_reads_from_fast5_file (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_from_fast5_file) ... ok test_yield_fast5_reads_set_versus_list_equality (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_set_versus_list_equality) ... ok test_yield_fast5_reads_type_error (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_type_error) ... ok test_yield_fast5_reads_with_empty_set (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_with_empty_set) ... ok test_yield_fast5_reads_with_garbage_set (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_with_garbage_set) ... ok test_yield_fast5_reads_with_list (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_with_list) ... ok test_yield_fast5_reads_with_set (test.test_fast5_conversion_utils.TestFast5ConversionUtilities.test_yield_fast5_reads_with_set) ... ok test_add_read_to_multi (test.test_fast5_converter.TestFast5Converter.test_add_read_to_multi) ... ok test_multi_to_single (test.test_fast5_converter.TestFast5Converter.test_multi_to_single) ... ok test_multi_to_single_incorrect_types (test.test_fast5_converter.TestFast5Converter.test_multi_to_single_incorrect_types) ... ok test_single_to_multi (test.test_fast5_converter.TestFast5Converter.test_single_to_multi) ... skipped 'Permission Denied - to open folder' test_single_to_multi_incorrect_types (test.test_fast5_converter.TestFast5Converter.test_single_to_multi_incorrect_types) ... ok test_001_get_latest_analysis (test.test_fast5_file.TestFast5File.test_001_get_latest_analysis) ... ok test_002_add_analysis_group (test.test_fast5_file.TestFast5File.test_002_add_analysis_group) ... ok test_002_read_summary_data (test.test_fast5_file.TestFast5File.test_002_read_summary_data) ... ok test_003_add_analysis_subgroup (test.test_fast5_file.TestFast5File.test_003_add_analysis_subgroup) ... ok test_010_v0_6_single (test.test_fast5_file.TestFast5File.test_010_v0_6_single) ... ok test_011_v0_6_raw (test.test_fast5_file.TestFast5File.test_011_v0_6_raw) ... ok test_012_v1_0_single (test.test_fast5_file.TestFast5File.test_012_v1_0_single) ... ok test_fast5_add_analysis_dataset (test.test_fast5_file.TestFast5File.test_fast5_add_analysis_dataset) ... ok test_fast5_add_and_get_chain (test.test_fast5_file.TestFast5File.test_fast5_add_and_get_chain) ... ok test_fast5_add_group (test.test_fast5_file.TestFast5File.test_fast5_add_group) ... ok test_fast5_set_analysis_config (test.test_fast5_file.TestFast5File.test_fast5_set_analysis_config) ... ok test_correct_type (test.test_fast5_interface.TestFast5Interface.test_correct_type) ... ok test_extract_selected_reads (test.test_fast5_subset.TestFast5Subset.test_extract_selected_reads) ... ok test_read_generator (test.test_fast5_subset.TestFast5Subset.test_read_generator) ... ok test_selector_args_generator (test.test_fast5_subset.TestFast5Subset.test_selector_args_generator) ... ok test_subset_from_multi (test.test_fast5_subset.TestFast5Subset.test_subset_from_multi) ... ok test_subset_from_single (test.test_fast5_subset.TestFast5Subset.test_subset_from_single) ... ok test_create_read (test.test_hardlink_metadata.TestHardlinkMetaData.test_create_read) ... ok test_hardlink_multi_compression (test.test_hardlink_metadata.TestHardlinkMetaData.test_hardlink_multi_compression) ... ok test_hardlink_single_to_multi (test.test_hardlink_metadata.TestHardlinkMetaData.test_hardlink_single_to_multi) ... ok test_hardlink_subset (test.test_hardlink_metadata.TestHardlinkMetaData.test_hardlink_subset) ... ok test_hardlink_subset_single_reads (test.test_hardlink_metadata.TestHardlinkMetaData.test_hardlink_subset_single_reads) ... ok test_add_analysis (test.test_multi_fast5.TestMultiFast5.test_add_analysis) ... ok test_channel_info (test.test_multi_fast5.TestMultiFast5.test_channel_info) ... ok test_raw_data (test.test_multi_fast5.TestMultiFast5.test_raw_data) ... ok test_read_interface (test.test_multi_fast5.TestMultiFast5.test_read_interface) ... ok test_tracking_id (test.test_multi_fast5.TestMultiFast5.test_tracking_id) ... ok test_001_raw_only (test.test_segmentation_tools.TestSegmentationTools.test_001_raw_only) ... ok test_002_events_only (test.test_segmentation_tools.TestSegmentationTools.test_002_events_only) ... ok ---------------------------------------------------------------------- Ran 76 tests in 3.242s OK (skipped=5) create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/ont-fast5-api/ -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running install_lib creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11 creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_segmentation_tools.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_multi_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_hardlink_metadata.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_fast5_subset.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_fast5_interface.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_fast5_file.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_fast5_converter.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_fast5_conversion_utils.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_event_detection_tools.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_demux_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_data_sanitisation.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_compression_settings.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_compress_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_check_compression.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_basecall_2d_tools.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_basecall_1d_tools.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/helpers.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/test_alignment_tools.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__pycache__/__init__.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__pycache__ creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/multi_read_analyses copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/multi_read_analyses/batch_0.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/multi_read_analyses copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/basecall_2d_file_v1.0.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/read_file_v0.6_raw.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/0059d270-3238-4413-b38b-f588e28326df.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/002b0891-03bf-4622-ae66-ae6984890ed4.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/004a87b0-c9f6-4237-b4d6-466ab979aee2.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/000c0b4e-46c2-4fb5-9b17-d7031eefb975.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/0048058c-ecb4-4a0f-b283-9a128bd598c5.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/000ebd63-3e1a-4499-9ded-26af3225a022.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/00031f3e-415c-4ab5-9c16-fb6fe45ff519.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/single_reads/002ad0e4-c6bb-4eff-a30f-5fec01475ab8.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/single_reads creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/unlinked copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/hardlink/unlinked/batch0.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/hardlink/unlinked creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/vbz_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/vbz_reads/vbz_reads.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/vbz_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/read_file_v0.6_single.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/telemetry_test.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/single_read_analyses copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_read_analyses/read.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/single_read_analyses creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/summaries copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/summaries/two_barcode_summary.txt -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/summaries creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/multi_read copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/multi_read/batch_0.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/multi_read copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/read_file_v1.0_single.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/rle_basecall_table copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/rle_basecall_table/rle_example.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/rle_basecall_table creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/fe8a3026-d1f4-46b3-8daa-e610f27acde1.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/fe85b517-62ee-4a33-8767-41cab5d5ab39.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/fe9374ee-b86a-4ca4-81dc-ac06e3297728.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/data/single_reads/read0.fast5 -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/data/single_reads copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_multi_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_compression_settings.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_data_sanitisation.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_basecall_1d_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_segmentation_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_fast5_interface.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_hardlink_metadata.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_fast5_conversion_utils.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/helpers.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_event_detection_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_demux_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_basecall_2d_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_fast5_file.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_alignment_tools.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_fast5_subset.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_check_compression.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_compress_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/test/test_fast5_converter.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/multi_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/fast5_interface.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/fast5_info.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/static_data.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/data_sanitisation.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/fast5_read.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/fast5_file.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/compression_settings.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__pycache__/__init__.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__pycache__ creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/vbz_plugin copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/vbz_plugin/libvbz_hdf_plugin.so -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/vbz_plugin creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__pycache__/basecall_2d.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__pycache__/basecall_1d.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__pycache__/event_detection.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__pycache__/segmentation.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__pycache__/base_tool.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__pycache__/alignment.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__pycache__/__init__.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/basecall_1d.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/event_detection.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/base_tool.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/alignment.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/basecall_2d.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/analysis_tools/segmentation.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools creating /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/fast5_subset.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/single_to_multi_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/multi_to_single_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/demux_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/compress_fast5.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/conversion_utils.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/check_file_compression.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__pycache__/__init__.cpython-311.pyc -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__pycache__ copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/fast5_subset.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/single_to_multi_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/compress_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/check_file_compression.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/multi_to_single_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/demux_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/conversion_tools/conversion_utils.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/static_data.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/fast5_interface.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/fast5_info.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/helpers.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/compression_settings.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/fast5_read.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/data_sanitisation.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/__init__.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/multi_fast5.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api copying /build/ont-fast5-api-4.1.1+dfsg/.pybuild/cpython3_3.11_ont_fast5_api/build/ont_fast5_api/fast5_file.py -> /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_multi_fast5.py to test_multi_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_compression_settings.py to test_compression_settings.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_data_sanitisation.py to test_data_sanitisation.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_basecall_1d_tools.py to test_basecall_1d_tools.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_segmentation_tools.py to test_segmentation_tools.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_fast5_interface.py to test_fast5_interface.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_hardlink_metadata.py to test_hardlink_metadata.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_fast5_conversion_utils.py to test_fast5_conversion_utils.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/helpers.py to helpers.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_event_detection_tools.py to test_event_detection_tools.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_demux_fast5.py to test_demux_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_basecall_2d_tools.py to test_basecall_2d_tools.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_fast5_file.py to test_fast5_file.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_alignment_tools.py to test_alignment_tools.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_fast5_subset.py to test_fast5_subset.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/__init__.py to __init__.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_check_compression.py to test_check_compression.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_compress_fast5.py to test_compress_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/test/test_fast5_converter.py to test_fast5_converter.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/basecall_1d.py to basecall_1d.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/event_detection.py to event_detection.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/base_tool.py to base_tool.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/alignment.py to alignment.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/basecall_2d.py to basecall_2d.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/__init__.py to __init__.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/analysis_tools/segmentation.py to segmentation.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/fast5_subset.py to fast5_subset.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/single_to_multi_fast5.py to single_to_multi_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/compress_fast5.py to compress_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/__init__.py to __init__.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/check_file_compression.py to check_file_compression.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/multi_to_single_fast5.py to multi_to_single_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/demux_fast5.py to demux_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/conversion_tools/conversion_utils.py to conversion_utils.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/static_data.py to static_data.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/fast5_interface.py to fast5_interface.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/fast5_info.py to fast5_info.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/helpers.py to helpers.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/compression_settings.py to compression_settings.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/fast5_read.py to fast5_read.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/data_sanitisation.py to data_sanitisation.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/__init__.py to __init__.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/multi_fast5.py to multi_fast5.cpython-311.pyc byte-compiling /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api/fast5_file.py to fast5_file.cpython-311.pyc running install_egg_info running egg_info creating ont_fast5_api.egg-info writing ont_fast5_api.egg-info/PKG-INFO writing dependency_links to ont_fast5_api.egg-info/dependency_links.txt writing entry points to ont_fast5_api.egg-info/entry_points.txt writing requirements to ont_fast5_api.egg-info/requires.txt writing top-level names to ont_fast5_api.egg-info/top_level.txt writing manifest file 'ont_fast5_api.egg-info/SOURCES.txt' reading manifest file 'ont_fast5_api.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.md' no previously-included directories found matching 'build' no previously-included directories found matching 'docs' adding license file 'LICENSE.md' writing manifest file 'ont_fast5_api.egg-info/SOURCES.txt' Copying ont_fast5_api.egg-info to /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/lib/python3.11/dist-packages/ont_fast5_api-4.1.1.egg-info Skipping SOURCES.txt running install_scripts Installing check_compression script to /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/bin Installing compress_fast5 script to /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/bin Installing demux_fast5 script to /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/bin Installing fast5_subset script to /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/bin Installing multi_to_single_fast5 script to /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/bin Installing single_to_multi_fast5 script to /build/ont-fast5-api-4.1.1+dfsg/debian/ont-fast5-api/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 fs:483: renaming libvbz_hdf_plugin.so to libvbz_hdf_plugin.cpython-311-aarch64-linux-gnu.so dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild debian/rules override_dh_fixperms make[1]: Entering directory '/build/ont-fast5-api-4.1.1+dfsg' dh_fixperms find debian -name "*.fast5" -exec chmod -x \{\} \; make[1]: Leaving directory '/build/ont-fast5-api-4.1.1+dfsg' dh_missing -O--buildsystem=pybuild debian/rules override_dh_dwz make[1]: Entering directory '/build/ont-fast5-api-4.1.1+dfsg' dh_dwz || true dwz: debian/ont-fast5-api/usr/lib/python3/dist-packages/ont_fast5_api/vbz_plugin/libvbz_hdf_plugin.cpython-311-aarch64-linux-gnu.so: .debug_info section not present make[1]: Leaving directory '/build/ont-fast5-api-4.1.1+dfsg' dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'ont-fast5-api' in '../ont-fast5-api_4.1.1+dfsg-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo dpkg-genchanges --build=binary -O../ont-fast5-api_4.1.1+dfsg-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/30298 and its subdirectories I: Current time: Sun Apr 30 10:01:24 -12 2023 I: pbuilder-time-stamp: 1682892084 Sun Apr 30 22:01:26 UTC 2023 I: 1st build successful. Starting 2nd build on remote node codethink11-arm64.debian.net. Sun Apr 30 22:01:26 UTC 2023 I: Preparing to do remote build '2' on codethink11-arm64.debian.net. Sun Apr 30 22:03:16 UTC 2023 I: Deleting $TMPDIR on codethink11-arm64.debian.net. Sun Apr 30 22:03:17 UTC 2023 I: ont-fast5-api_4.1.1+dfsg-2_arm64.changes: Format: 1.8 Date: Thu, 29 Dec 2022 15:35:02 +0530 Source: ont-fast5-api Binary: ont-fast5-api Architecture: arm64 Version: 4.1.1+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: ont-fast5-api - simple interface to HDF5 files of the Oxford Nanopore .fast5 file Changes: ont-fast5-api (4.1.1+dfsg-2) unstable; urgency=medium . * Team Upload. * Explicitly depend on python3-h5py which somehow does not get picked up by debhelper Checksums-Sha1: d4c75a630656d5ae284f886501549e978090003c 6819 ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo 0b0885d98e8473fcf93975c9094fad2f81b42634 49248 ont-fast5-api_4.1.1+dfsg-2_arm64.deb Checksums-Sha256: f3fecdb7a7ea6c252161fef6335c436b183a1f2de8ce1a03b6015e54cebf656d 6819 ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo 1d7b208a9e70179628105165865193a5957ed7065b3d9fbf084725985535549c 49248 ont-fast5-api_4.1.1+dfsg-2_arm64.deb Files: f48f0b06647b3c10e313f72ff785abfb 6819 science optional ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo 1bbf931647c4304fb9918b7ccdaababd 49248 science optional ont-fast5-api_4.1.1+dfsg-2_arm64.deb Sun Apr 30 22:03:18 UTC 2023 I: diffoscope 241 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.RJGiuLZE/ont-fast5-api_4.1.1+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.RJGiuLZE/ont-fast5-api_4.1.1+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.RJGiuLZE/ont-fast5-api_4.1.1+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.RJGiuLZE/b1/ont-fast5-api_4.1.1+dfsg-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.RJGiuLZE/b2/ont-fast5-api_4.1.1+dfsg-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.354s) 0.354s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.016s) 0.016s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Sun Apr 30 22:03:20 UTC 2023 I: diffoscope 241 found no differences in the changes files, and a .buildinfo file also exists. Sun Apr 30 22:03:20 UTC 2023 I: ont-fast5-api from bookworm built successfully and reproducibly on arm64. Sun Apr 30 22:03:21 UTC 2023 I: Submitting .buildinfo files to external archives: Sun Apr 30 22:03:21 UTC 2023 I: Submitting 8.0K b1/ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo.asc Sun Apr 30 22:03:22 UTC 2023 I: Submitting 8.0K b2/ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo.asc Sun Apr 30 22:03:23 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Apr 30 22:03:23 UTC 2023 I: Done submitting .buildinfo files. Sun Apr 30 22:03:23 UTC 2023 I: Removing signed ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo.asc files: removed './b1/ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo.asc' removed './b2/ont-fast5-api_4.1.1+dfsg-2_arm64.buildinfo.asc'