Fri Jul 7 02:45:20 UTC 2023 I: starting to build maffilter/bookworm/arm64 on jenkins on '2023-07-07 02:44' Fri Jul 7 02:45:20 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_27/3802/console.log Fri Jul 7 02:45:20 UTC 2023 I: Downloading source for bookworm/maffilter=1.3.1+dfsg-4 --2023-07-07 02:45:20-- http://cdn-fastly.deb.debian.org/debian/pool/main/m/maffilter/maffilter_1.3.1%2bdfsg-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2263 (2.2K) [text/prs.lines.tag] Saving to: ‘maffilter_1.3.1+dfsg-4.dsc’ 0K .. 100% 191M=0s 2023-07-07 02:45:20 (191 MB/s) - ‘maffilter_1.3.1+dfsg-4.dsc’ saved [2263/2263] Fri Jul 7 02:45:20 UTC 2023 I: maffilter_1.3.1+dfsg-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: maffilter Binary: maffilter, maffilter-examples Architecture: any all Version: 1.3.1+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Julien Dutheil , Pranav Ballaney Homepage: https://jydu.github.io/maffilter/ Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/maffilter Vcs-Git: https://salsa.debian.org/med-team/maffilter.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-omics-dev, libboost-iostreams-dev, zlib1g-dev, libbz2-dev Package-List: maffilter deb science optional arch=any maffilter-examples deb science optional arch=all Checksums-Sha1: 52fb7acc20ef914ef4e44676b316cf3753c46c9b 78668340 maffilter_1.3.1+dfsg.orig.tar.xz 50959deb73d69b5e9504cd2eb86fc2725de30b0e 4676 maffilter_1.3.1+dfsg-4.debian.tar.xz Checksums-Sha256: 1767aae6061ca7d12682f7ded1e1b9f6ecad3d03fcfa02ff24b5351d51d8dc70 78668340 maffilter_1.3.1+dfsg.orig.tar.xz 1a811ad9aeec72b9658bd1826942e9d99d395881594f2fd7aa4d3a49ad8dde99 4676 maffilter_1.3.1+dfsg-4.debian.tar.xz Files: 3548c76d884bacc4ce267d70f304435e 78668340 maffilter_1.3.1+dfsg.orig.tar.xz 11ac4aa8312bf39ecbd41805b7a9419b 4676 maffilter_1.3.1+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmN/VlkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHg1g//R23ouDqrKOcsMvrqsLL0Xu6aXbWB5IrH Fq5Gr94TfBO42ikAZpWKurIh00/YFdbuWYKOkJJRRcsF2+wgcHnlIrbGKI2jXLV5 myDJsZ6fTK40CgdoPnalXMwNIq9or1e7AqIyc1rC80D8MfcR3hWQpVKaMiLQdFT8 Hatva1MfNp84YWSeagpYkRrZedneZTvsgqn+lCaACnrExlQpRaxG5pZNYnn6KFOt ly/55HR+IAFCZ1v69dChKn1heLKmyzYENND3Jgskkm4APDNEK3ohKEa1J/LgPAyP ok5/9q2xgrsnzwSnEQ+9ocwLVVM9200ExcFqtH1XrfyiEIgu+IxA74IgLUwLGHMT 2avaQnFeLbzHzE4wDtMHpIeJsCB9PJ5vvmzwo8a+/oegPctt654wom3hOSTthDLk VW5w9QBKvJOSUrZZmze3gTmuDmUIJa1hHMzyXY8XjhaTBe2CaHKD/nl3PuWPPIxb Tn+t4PVqikjc+bhbJ5DFmUgYNMiu2q9aYprgp1gb2XAD/w02t1pfyxcx/eXl9tIo fNFblF6ifZEylEn33TmUI+R1KEfJKUBqx8cp0wjSyeUs2YbFIZd9dS+mGvoC+IFX ZrKmmjNW+PNGwKoeClKEdKDOjyvcJKlTpxccego0KHg1W6Ktskeb+ohRUjPVs1bL bYH2NTQE32Q= =gPTN -----END PGP SIGNATURE----- Fri Jul 7 02:45:20 UTC 2023 I: Checking whether the package is not for us Fri Jul 7 02:45:20 UTC 2023 I: Starting 1st build on remote node codethink15-arm64.debian.net. Fri Jul 7 02:45:20 UTC 2023 I: Preparing to do remote build '1' on codethink15-arm64.debian.net. Fri Jul 7 02:50:11 UTC 2023 I: Deleting $TMPDIR on codethink15-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Aug 7 21:08:24 -12 2024 I: pbuilder-time-stamp: 1723108104 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] tar: ./bin: time stamp 2025-08-14 11:10:10 is 32104905.71749528 s in the future tar: ./build: time stamp 2025-08-14 11:10:20 is 32104915.71730822 s in the future tar: ./dev/ptmx: time stamp 2025-08-14 11:09:56 is 32104891.71712304 s in the future tar: ./dev/pts: time stamp 2025-08-14 11:09:56 is 32104891.71707112 s in the future tar: ./dev/console: time stamp 2025-08-14 11:09:56 is 32104891.71703384 s in the future tar: ./dev/tty: time stamp 2025-08-14 11:09:56 is 32104891.71699294 s in the future tar: ./dev/urandom: time stamp 2025-08-14 11:09:56 is 32104891.71695352 s in the future tar: ./dev/random: time stamp 2025-08-14 11:09:56 is 32104891.71691476 s in the future tar: ./dev/full: time stamp 2025-08-14 11:09:56 is 32104891.7168763 s in the future tar: ./dev/zero: time stamp 2025-08-14 11:09:56 is 32104891.7168364 s in the future tar: ./dev/null: time stamp 2025-08-14 11:09:56 is 32104891.71679646 s in the future tar: ./etc/ld.so.cache: time stamp 2025-08-14 11:10:31 is 32104926.7164715 s in the future tar: ./etc/gss: time stamp 2025-08-14 11:10:19 is 32104914.71627348 s in the future tar: ./etc/shells: time stamp 2025-08-14 11:10:11 is 32104906.71620564 s in the future tar: ./etc/subgid: time stamp 2025-08-14 11:10:09 is 32104904.71614238 s in the future tar: ./etc/subuid: time stamp 2025-08-14 11:10:09 is 32104904.7160933 s in the future tar: ./etc/group: time stamp 2025-08-14 11:10:09 is 32104904.71603872 s in the future tar: ./etc/group-: time stamp 2025-08-14 11:09:56 is 32104891.71598194 s in the future tar: ./etc/gshadow: time stamp 2025-08-14 11:10:09 is 32104904.7158591 s in the future tar: ./etc/passwd: time stamp 2025-08-14 11:10:09 is 32104904.71575368 s in the future tar: ./etc/passwd-: time stamp 2025-08-14 11:09:56 is 32104891.71568854 s in the future tar: ./etc/shadow: time stamp 2025-08-14 11:10:09 is 32104904.71556396 s in the future tar: ./etc/.pwd.lock: time stamp 2025-08-14 11:10:09 is 32104904.7154665 s in the future tar: ./etc/environment: time stamp 2025-08-14 11:10:09 is 32104904.71541048 s in the future tar: ./etc/timezone: time stamp 2025-08-14 11:10:06 is 32104901.71531762 s in the future tar: ./etc/opt: time stamp 2025-08-14 11:09:56 is 32104891.71526286 s in the future tar: ./etc/fstab: time stamp 2025-08-14 11:09:56 is 32104891.71514244 s in the future tar: ./etc/init.d: time stamp 2025-08-14 11:10:07 is 32104902.71503452 s in the future tar: ./etc/perl/Net: time stamp 2025-08-14 11:10:10 is 32104905.7148306 s in the future tar: ./etc/pam.d/common-session-noninteractive: time stamp 2025-08-14 11:10:09 is 32104904.7147366 s in the future tar: ./etc/pam.d/common-session: time stamp 2025-08-14 11:10:09 is 32104904.71466466 s in the future tar: ./etc/pam.d/common-password: time stamp 2025-08-14 11:10:09 is 32104904.7145993 s in the future tar: ./etc/pam.d/common-account: time stamp 2025-08-14 11:10:09 is 32104904.71453966 s in the future tar: ./etc/pam.d/common-auth: time stamp 2025-08-14 11:10:09 is 32104904.7144832 s in the future tar: ./etc/pam.d: time stamp 2025-08-14 11:10:09 is 32104904.71407068 s in the future tar: ./etc/security/opasswd: time stamp 2025-08-14 11:10:09 is 32104904.7139599 s in the future tar: ./etc/security: time stamp 2025-08-14 11:10:09 is 32104904.71351926 s in the future tar: ./etc/terminfo: time stamp 2025-08-14 11:10:06 is 32104901.71341474 s in the future tar: ./etc/selinux: time stamp 2025-08-14 11:10:06 is 32104901.71331278 s in the future tar: ./etc/ld.so.conf.d: time stamp 2025-08-14 11:10:31 is 32104926.71266418 s in the future tar: ./etc/cron.d: time stamp 2025-08-14 11:10:07 is 32104902.71238774 s in the future tar: ./etc/update-motd.d: time stamp 2025-08-14 11:10:07 is 32104902.71072142 s in the future tar: ./etc/skel: time stamp 2025-08-14 11:10:07 is 32104902.71053686 s in the future tar: ./etc/dpkg/dpkg.cfg.d/02speedup: time stamp 2025-08-14 11:10:52 is 32104947.71025392 s in the future tar: ./etc/dpkg/dpkg.cfg.d: time stamp 2025-08-14 11:10:52 is 32104947.7102114 s in the future tar: ./etc/dpkg/origins/default: time stamp 2025-08-14 11:09:56 is 32104891.71010094 s in the future tar: ./etc/dpkg/origins: time stamp 2025-08-14 11:10:07 is 32104902.71001198 s in the future tar: ./etc/dpkg: time stamp 2025-08-14 11:10:20 is 32104915.70998002 s in the future tar: ./etc/default: time stamp 2025-08-14 11:10:09 is 32104904.70981264 s in the future tar: ./etc/logrotate.d: time stamp 2025-08-14 11:10:31 is 32104926.70953808 s in the future tar: ./etc/cron.daily: time stamp 2025-08-14 11:10:31 is 32104926.70931958 s in the future tar: ./etc/apt/trusted.gpg.d: time stamp 2025-08-14 11:10:06 is 32104901.70879576 s in the future tar: ./etc/apt/apt.conf.d/15pbuilder: time stamp 2025-08-14 11:10:20 is 32104915.70859364 s in the future tar: ./etc/apt/apt.conf.d/80proxy: time stamp 2025-08-14 11:10:52 is 32104947.7084545 s in the future tar: ./etc/apt/apt.conf.d: time stamp 2025-08-14 11:10:52 is 32104947.70841594 s in the future tar: ./etc/apt/sources.list: time stamp 2025-08-14 11:10:52 is 32104947.70836244 s in the future tar: ./etc/apt: time stamp 2025-08-14 11:10:52 is 32104947.70832766 s in the future tar: ./lib: time stamp 2025-08-14 11:10:10 is 32104905.70817268 s in the future tar: ./media: time stamp 2025-08-14 11:09:56 is 32104891.70811932 s in the future tar: ./mnt: time stamp 2025-08-14 11:09:56 is 32104891.70807318 s in the future tar: ./opt: time stamp 2025-08-14 11:09:56 is 32104891.70803074 s in the future tar: ./root: time stamp 2025-08-14 11:09:56 is 32104891.70788744 s in the future tar: ./run/lock: time stamp 2025-08-14 11:09:56 is 32104891.70779612 s in the future tar: ./run/mount: time stamp 2025-08-14 11:09:56 is 32104891.70774576 s in the future tar: ./sbin: time stamp 2025-08-14 11:10:10 is 32104905.7077044 s in the future tar: ./srv: time stamp 2025-08-14 11:09:56 is 32104891.70765876 s in the future tar: ./usr/local/man: time stamp 2025-08-14 11:09:56 is 32104891.70753218 s in the future tar: ./usr/local/etc: time stamp 2025-08-14 11:09:56 is 32104891.70747994 s in the future tar: ./usr/local/src: time stamp 2025-08-14 11:09:56 is 32104891.70743364 s in the future tar: ./usr/local/sbin: time stamp 2025-08-14 11:09:56 is 32104891.70738916 s in the future tar: ./usr/local/include: time stamp 2025-08-14 11:09:56 is 32104891.70734512 s in the future tar: ./usr/local/lib: time stamp 2025-08-14 11:09:56 is 32104891.70730164 s in the future tar: ./usr/local/games: time stamp 2025-08-14 11:09:56 is 32104891.70725948 s in the future tar: ./usr/local/bin: time stamp 2025-08-14 11:09:56 is 32104891.70721722 s in the future tar: ./usr/local/share/man: time stamp 2025-08-14 11:09:56 is 32104891.70715868 s in the future tar: 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./usr/include/linux/netfilter: time stamp 2025-08-14 11:10:19 is 32104914.6408178 s in the future tar: ./usr/include/linux/mmc: time stamp 2025-08-14 11:10:19 is 32104914.6407177 s in the future tar: ./usr/include/linux/misc: time stamp 2025-08-14 11:10:19 is 32104914.64062296 s in the future tar: ./usr/include/linux/isdn: time stamp 2025-08-14 11:10:19 is 32104914.64051474 s in the future tar: ./usr/include/linux/iio: time stamp 2025-08-14 11:10:19 is 32104914.64033882 s in the future tar: ./usr/include/linux/hsi: time stamp 2025-08-14 11:10:19 is 32104914.64019932 s in the future tar: ./usr/include/linux/hdlc: time stamp 2025-08-14 11:10:19 is 32104914.64008706 s in the future tar: ./usr/include/linux/genwqe: time stamp 2025-08-14 11:10:19 is 32104914.63996184 s in the future tar: ./usr/include/linux/dvb: time stamp 2025-08-14 11:10:19 is 32104914.63952974 s in the future tar: ./usr/include/linux/cifs: time stamp 2025-08-14 11:10:19 is 32104914.6393814 s in the future tar: ./usr/include/linux/can: time stamp 2025-08-14 11:10:19 is 32104914.63894316 s in the future tar: ./usr/include/linux/caif: time stamp 2025-08-14 11:10:19 is 32104914.63877786 s in the future tar: ./usr/include/linux/byteorder: time stamp 2025-08-14 11:10:19 is 32104914.6386281 s in the future tar: ./usr/include/linux/android: time stamp 2025-08-14 11:10:19 is 32104914.63845608 s in the future tar: ./usr/include/linux: time stamp 2025-08-14 11:10:19 is 32104914.63841754 s in the future tar: ./usr/include/asm-generic: time stamp 2025-08-14 11:10:19 is 32104914.63698608 s in the future tar: ./usr/include/tirpc/rpcsvc: time stamp 2025-08-14 11:10:19 is 32104914.6367148 s in the future tar: ./usr/include/tirpc/rpc: time stamp 2025-08-14 11:10:19 is 32104914.63516682 s in the future tar: ./usr/include/tirpc: time stamp 2025-08-14 11:10:19 is 32104914.63511902 s in the future tar: ./usr/include/rpcsvc: time stamp 2025-08-14 11:10:20 is 32104915.6328362 s in the future tar: ./usr/include/scsi: time stamp 2025-08-14 11:10:18 is 32104913.62104028 s in the future tar: ./usr/include/rpc: time stamp 2025-08-14 11:10:18 is 32104913.62090136 s in the future tar: ./usr/include/protocols: time stamp 2025-08-14 11:10:18 is 32104913.62068442 s in the future tar: ./usr/include/nfs: time stamp 2025-08-14 11:10:18 is 32104913.62057048 s in the future tar: ./usr/include/netrose: time stamp 2025-08-14 11:10:18 is 32104913.62045282 s in the future tar: ./usr/include/netrom: time stamp 2025-08-14 11:10:18 is 32104913.62034744 s in the future tar: ./usr/include/netpacket: time stamp 2025-08-14 11:10:18 is 32104913.6202459 s in the future tar: ./usr/include/netiucv: time stamp 2025-08-14 11:10:18 is 32104913.6201393 s in the future tar: ./usr/include/netipx: time stamp 2025-08-14 11:10:18 is 32104913.62004118 s in the future tar: ./usr/include/netinet: time stamp 2025-08-14 11:10:18 is 32104913.61938122 s in the future tar: ./usr/include/neteconet: time stamp 2025-08-14 11:10:18 is 32104913.61926368 s in the future tar: ./usr/include/netax25: time stamp 2025-08-14 11:10:18 is 32104913.61915482 s in the future tar: ./usr/include/netatalk: time stamp 2025-08-14 11:10:18 is 32104913.61905604 s in the future tar: ./usr/include/netash: time stamp 2025-08-14 11:10:18 is 32104913.61886916 s in the future tar: ./usr/include/net: time stamp 2025-08-14 11:10:18 is 32104913.61840384 s in the future tar: ./usr/include/finclude/aarch64-linux-gnu: time stamp 2025-08-14 11:10:18 is 32104913.61826058 s in the future tar: ./usr/include/finclude: time stamp 2025-08-14 11:10:18 is 32104913.61822364 s in the future tar: ./usr/include/arpa: time stamp 2025-08-14 11:10:18 is 32104913.61787598 s in the future tar: ./usr/include/c++/12/tr2: time stamp 2025-08-14 11:10:18 is 32104913.60107126 s in the future tar: ./usr/include/c++/12/tr1: time stamp 2025-08-14 11:10:18 is 32104913.59423368 s in the future tar: ./usr/include/c++/12/pstl: time stamp 2025-08-14 11:10:18 is 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./usr/share/locale/lg/LC_TIME: time stamp 2025-08-14 11:09:59 is 32104885.27147504 s in the future tar: ./usr/share/locale/ms/LC_TIME: time stamp 2025-08-14 11:09:59 is 32104885.27143088 s in the future tar: ./usr/share/locale: time stamp 2025-08-14 11:10:27 is 32104913.2713891 s in the future tar: ./usr/share/man/de/man8: time stamp 2025-08-14 11:10:31 is 32104917.27135916 s in the future tar: ./usr/share/man/de/man1: time stamp 2025-08-14 11:10:28 is 32104914.2713294 s in the future tar: ./usr/share/man/de: time stamp 2025-08-14 11:09:51 is 32104877.27130116 s in the future tar: ./usr/share/man/fr/man8: time stamp 2025-08-14 11:10:31 is 32104917.27127196 s in the future tar: ./usr/share/man/fr/man1: time stamp 2025-08-14 11:10:31 is 32104917.27124268 s in the future tar: ./usr/share/man/fr: time stamp 2025-08-14 11:10:13 is 32104899.27121454 s in the future tar: ./usr/share/man/man8: time stamp 2025-08-14 11:10:31 is 32104917.27118632 s in the future tar: ./usr/share/man/es/man8: time stamp 2025-08-14 11:10:31 is 32104917.2711571 s in the future tar: ./usr/share/man/es/man1: time stamp 2025-08-14 11:10:31 is 32104917.27112824 s in the future tar: ./usr/share/man/es: time stamp 2025-08-14 11:09:52 is 32104878.27109984 s in the future tar: ./usr/share/man/it/man8: time stamp 2025-08-14 11:10:31 is 32104917.2710703 s in the future tar: ./usr/share/man/it/man1: time stamp 2025-08-14 11:10:28 is 32104914.2710408 s in the future tar: ./usr/share/man/it: time stamp 2025-08-14 11:09:52 is 32104878.27101296 s in the future tar: ./usr/share/man/ja/man8: time stamp 2025-08-14 11:10:31 is 32104917.2706099 s in the future tar: ./usr/share/man/ja/man1: time stamp 2025-08-14 11:10:13 is 32104899.27057806 s in the future tar: ./usr/share/man/ja: time stamp 2025-08-14 11:09:52 is 32104878.27054954 s in the future tar: ./usr/share/man/man1: time stamp 2025-08-14 11:10:31 is 32104917.27052058 s in the future tar: ./usr/share/man/man7: time stamp 2025-08-14 11:10:13 is 32104899.27049124 s in the future tar: ./usr/share/man/pl/man8: time stamp 2025-08-14 11:10:31 is 32104917.27046154 s in the future tar: ./usr/share/man/pl/man1: time stamp 2025-08-14 11:10:13 is 32104899.27043218 s in the future tar: ./usr/share/man/pl: time stamp 2025-08-14 11:09:52 is 32104878.27040424 s in the future tar: ./usr/share/man/sl/man1: time stamp 2025-08-14 11:10:07 is 32104893.27037478 s in the future tar: ./usr/share/man/sv/man1: time stamp 2025-08-14 11:10:31 is 32104917.27032656 s in the future tar: ./usr/share/man/sv: time stamp 2025-08-14 11:10:13 is 32104899.270283 s in the future tar: ./usr/share/man/cs/man8: time stamp 2025-08-14 11:10:31 is 32104917.27024596 s in the future tar: ./usr/share/man/cs: time stamp 2025-08-14 11:09:55 is 32104881.2702169 s in the future tar: ./usr/share/man/fi/man8: time stamp 2025-08-14 11:10:31 is 32104917.27018756 s in the future tar: ./usr/share/man/fi: time stamp 2025-08-14 11:10:28 is 32104914.2701592 s in the future tar: ./usr/share/man/gl/man8: time stamp 2025-08-14 11:10:31 is 32104917.27012332 s in the future tar: ./usr/share/man/gl: time stamp 2025-08-14 11:10:28 is 32104914.27009124 s in the future tar: ./usr/share/man: time stamp 2025-08-14 11:10:28 is 32104914.27006366 s in the future tar: ./usr/share/zoneinfo/Antarctica: time stamp 2025-08-14 11:10:05 is 32104891.27003376 s in the future tar: ./usr/share/zoneinfo/Arctic: time stamp 2025-08-14 11:10:05 is 32104891.2700044 s in the future tar: ./usr/share/zoneinfo/Asia: time stamp 2025-08-14 11:10:05 is 32104891.26997766 s in the future tar: ./usr/share/zoneinfo/Atlantic: time stamp 2025-08-14 11:10:05 is 32104891.26994712 s in the future tar: ./usr/share/zoneinfo/Brazil: time stamp 2025-08-14 11:10:05 is 32104891.26991256 s in the future tar: ./usr/share/zoneinfo/Canada: time stamp 2025-08-14 11:10:05 is 32104891.26987702 s in the future tar: ./usr/share/zoneinfo/Chile: time stamp 2025-08-14 11:10:05 is 32104891.26984302 s in the future tar: ./usr/share/zoneinfo/Europe: time stamp 2025-08-14 11:10:05 is 32104891.26981154 s in the future tar: ./usr/share/zoneinfo/Mexico: time stamp 2025-08-14 11:10:05 is 32104891.26977918 s in the future tar: ./usr/share/zoneinfo/US: time stamp 2025-08-14 11:10:05 is 32104891.26974706 s in the future tar: ./usr/share/zoneinfo/posix: time stamp 2025-08-14 11:10:05 is 32104891.26971278 s in the future tar: ./usr/share/zoneinfo/right/Antarctica: time stamp 2025-08-14 11:10:05 is 32104891.2696771 s in the future tar: ./usr/share/zoneinfo/right/Arctic: time stamp 2025-08-14 11:10:05 is 32104891.26964288 s in the future tar: ./usr/share/zoneinfo/right/Asia: time stamp 2025-08-14 11:10:05 is 32104891.26960984 s in the future tar: ./usr/share/zoneinfo/right/Atlantic: time stamp 2025-08-14 11:10:05 is 32104891.26957548 s in the future tar: ./usr/share/zoneinfo/right/Brazil: time stamp 2025-08-14 11:10:05 is 32104891.26953764 s in the future tar: ./usr/share/zoneinfo/right/Canada: time stamp 2025-08-14 11:10:05 is 32104891.26950286 s in the future tar: ./usr/share/zoneinfo/right/Chile: time stamp 2025-08-14 11:10:05 is 32104891.26947098 s in the future tar: ./usr/share/zoneinfo/right/Europe: time stamp 2025-08-14 11:10:05 is 32104891.2694407 s in the future tar: ./usr/share/zoneinfo/right/Mexico: time stamp 2025-08-14 11:10:05 is 32104891.26940956 s in the future tar: ./usr/share/zoneinfo/right/US: time stamp 2025-08-14 11:10:05 is 32104891.26937894 s in the future tar: ./usr/share/zoneinfo/right: time stamp 2025-08-14 11:10:05 is 32104891.26934942 s in the future tar: ./usr/share/zoneinfo: time stamp 2025-08-14 11:10:05 is 32104891.26932166 s in the future tar: ./usr/share/aptitude: time stamp 2025-08-14 11:10:28 is 32104914.26929386 s in the future tar: ./usr/share: time stamp 2025-08-14 11:10:28 is 32104914.2692676 s in the future tar: ./usr/sbin: time stamp 2025-08-14 11:10:28 is 32104914.2692411 s in the future tar: ./usr/bin: time stamp 2025-08-14 11:10:31 is 32104917.26921418 s in the future tar: ./usr: time stamp 2025-08-14 11:09:56 is 32104882.26918914 s in the future tar: ./etc/alternatives: time stamp 2025-08-14 11:10:31 is 32104917.26915064 s in the future tar: ./etc/rc0.d: time stamp 2025-08-14 11:10:07 is 32104893.26912322 s in the future tar: ./etc/rc6.d: time stamp 2025-08-14 11:10:07 is 32104893.269097 s in the future tar: ./etc/rcS.d: time stamp 2025-08-14 11:10:07 is 32104893.26907048 s in the future tar: ./etc/systemd/system/timers.target.wants: time stamp 2025-08-14 11:10:10 is 32104896.26904044 s in the future tar: ./etc/systemd/system/multi-user.target.wants: time stamp 2025-08-14 11:10:07 is 32104893.2690099 s in the future tar: ./etc/systemd/system: time stamp 2025-08-14 11:10:07 is 32104893.26898142 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [maffilter_1.3.1+dfsg-4.dsc] I: copying [./maffilter_1.3.1+dfsg.orig.tar.xz] I: copying [./maffilter_1.3.1+dfsg-4.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Nov 23 23:32:41 2022 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./maffilter_1.3.1+dfsg-4.dsc: no acceptable signature found dpkg-source: info: extracting maffilter in maffilter-1.3.1+dfsg dpkg-source: info: unpacking maffilter_1.3.1+dfsg.orig.tar.xz dpkg-source: info: unpacking maffilter_1.3.1+dfsg-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16235/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 ' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16235' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.b0GIfp3Y/pbuilderrc_2RiE --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.b0GIfp3Y/b1 --logfile b1/build.log maffilter_1.3.1+dfsg-4.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink15-arm64 4.15.0-213-generic #224-Ubuntu SMP Mon Jun 19 13:29:44 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 14 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/16235/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-omics-dev, libboost-iostreams-dev, zlib1g-dev, libbz2-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19611 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on texinfo; however: Package texinfo is not installed. pbuilder-satisfydepends-dummy depends on libbpp-phyl-omics-dev; however: Package libbpp-phyl-omics-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost1.74-dev{a} libbpp-core-dev{a} libbpp-core4{a} libbpp-phyl-dev{a} libbpp-phyl-omics-dev{a} libbpp-phyl-omics3{a} libbpp-phyl12{a} libbpp-seq-dev{a} libbpp-seq-omics-dev{a} libbpp-seq-omics3{a} libbpp-seq12{a} libbrotli1{a} libbz2-dev{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu-dev{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtext-unidecode-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml-libxml-perl{a} libxml-namespacesupport-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} tex-common{a} texinfo{a} ucf{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules libwww-perl libxml-sax-expat-perl lynx psmisc publicsuffix wget 0 packages upgraded, 75 newly installed, 0 to remove and 0 not upgraded. Need to get 62.1 MB of archives. After unpacking 417 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 libproc2-0 arm64 2:4.0.2-3 [60.1 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 procps arm64 2:4.0.2-3 [698 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libarchive13 arm64 3.6.2-1 [316 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 libcurl4 arm64 7.88.1-10 [362 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 libjsoncpp25 arm64 1.9.5-4 [72.3 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 librhash0 arm64 1.4.3-3 [131 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 libuv1 arm64 1.44.2-1 [133 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 cmake-data all 3.25.1-1 [2026 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 cmake arm64 3.25.1-1 [6806 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 42 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 43 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 44 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 icu-devtools arm64 72.1-3 [192 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 libboost1.74-dev arm64 1.74.0+ds1-21 [9508 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 libboost-regex1.74.0 arm64 1.74.0+ds1-21 [448 kB] Get: 53 http://deb.debian.org/debian bookworm/main arm64 libicu-dev arm64 72.1-3 [10.2 MB] Get: 54 http://deb.debian.org/debian bookworm/main arm64 libboost-regex1.74-dev arm64 1.74.0+ds1-21 [526 kB] Get: 55 http://deb.debian.org/debian bookworm/main arm64 libboost-iostreams1.74-dev arm64 1.74.0+ds1-21 [247 kB] Get: 56 http://deb.debian.org/debian bookworm/main arm64 libboost-iostreams-dev arm64 1.74.0.3 [4316 B] Get: 57 http://deb.debian.org/debian bookworm/main arm64 libbpp-core4 arm64 2.4.1-9 [520 kB] Get: 58 http://deb.debian.org/debian bookworm/main arm64 libbpp-core-dev arm64 2.4.1-9 [910 kB] Get: 59 http://deb.debian.org/debian bookworm/main arm64 libbpp-seq12 arm64 2.4.1-9 [430 kB] Get: 60 http://deb.debian.org/debian bookworm/main arm64 libbpp-phyl12 arm64 2.4.1-8 [1435 kB] Get: 61 http://deb.debian.org/debian bookworm/main arm64 libbpp-seq-dev arm64 2.4.1-9 [708 kB] Get: 62 http://deb.debian.org/debian bookworm/main arm64 libbpp-phyl-dev arm64 2.4.1-8 [2942 kB] Get: 63 http://deb.debian.org/debian bookworm/main arm64 libbpp-seq-omics3 arm64 2.4.1-9 [188 kB] Get: 64 http://deb.debian.org/debian bookworm/main arm64 libbpp-phyl-omics3 arm64 2.4.1-4 [68.0 kB] Get: 65 http://deb.debian.org/debian bookworm/main arm64 libbpp-seq-omics-dev arm64 2.4.1-9 [362 kB] Get: 66 http://deb.debian.org/debian bookworm/main arm64 libbpp-phyl-omics-dev arm64 2.4.1-4 [132 kB] Get: 67 http://deb.debian.org/debian bookworm/main arm64 libbz2-dev arm64 1.0.8-5+b1 [31.5 kB] Get: 68 http://deb.debian.org/debian bookworm/main arm64 libtext-unidecode-perl all 1.30-3 [101 kB] Get: 69 http://deb.debian.org/debian bookworm/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get: 70 http://deb.debian.org/debian bookworm/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get: 71 http://deb.debian.org/debian bookworm/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get: 72 http://deb.debian.org/debian bookworm/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1+b1 [309 kB] Get: 73 http://deb.debian.org/debian bookworm/main arm64 tex-common all 6.18 [32.5 kB] Get: 74 http://deb.debian.org/debian bookworm/main arm64 texinfo arm64 6.8-6+b1 [1808 kB] Get: 75 http://deb.debian.org/debian bookworm/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1 [913 kB] Fetched 62.1 MB in 1s (52.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19611 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_arm64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../04-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../07-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../10-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package ucf. Preparing to unpack .../12-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../16-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../17-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../18-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../19-libxml2_2.9.14+dfsg-1.2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../20-libarchive13_3.6.2-1_arm64.deb ... Unpacking libarchive13:arm64 (3.6.2-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../21-libbrotli1_1.0.9-2+b6_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../22-libsasl2-modules-db_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../23-libsasl2-2_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../24-libldap-2.5-0_2.5.13+dfsg-5_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../25-libnghttp2-14_1.52.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.52.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../26-libpsl5_0.21.2-1_arm64.deb ... Unpacking libpsl5:arm64 (0.21.2-1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../27-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../28-libssh2-1_1.10.0-3+b1_arm64.deb ... Unpacking libssh2-1:arm64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../29-libcurl4_7.88.1-10_arm64.deb ... Unpacking libcurl4:arm64 (7.88.1-10) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../30-libexpat1_2.5.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.5.0-1) ... Selecting previously unselected package libjsoncpp25:arm64. Preparing to unpack .../31-libjsoncpp25_1.9.5-4_arm64.deb ... Unpacking libjsoncpp25:arm64 (1.9.5-4) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../32-librhash0_1.4.3-3_arm64.deb ... Unpacking librhash0:arm64 (1.4.3-3) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../33-libuv1_1.44.2-1_arm64.deb ... Unpacking libuv1:arm64 (1.44.2-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../34-cmake-data_3.25.1-1_all.deb ... Unpacking cmake-data (3.25.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../35-cmake_3.25.1-1_arm64.deb ... Unpacking cmake (3.25.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../36-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../37-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../38-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../39-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../40-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../41-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../42-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../43-libelf1_0.188-2.1_arm64.deb ... Unpacking libelf1:arm64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../44-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package gettext. Preparing to unpack .../45-gettext_0.21-12_arm64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../46-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../47-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../48-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../49-icu-devtools_72.1-3_arm64.deb ... Unpacking icu-devtools (72.1-3) ... Selecting previously unselected package libboost1.74-dev:arm64. Preparing to unpack .../50-libboost1.74-dev_1.74.0+ds1-21_arm64.deb ... Unpacking libboost1.74-dev:arm64 (1.74.0+ds1-21) ... Selecting previously unselected package libboost-regex1.74.0:arm64. Preparing to unpack .../51-libboost-regex1.74.0_1.74.0+ds1-21_arm64.deb ... Unpacking libboost-regex1.74.0:arm64 (1.74.0+ds1-21) ... Selecting previously unselected package libicu-dev:arm64. Preparing to unpack .../52-libicu-dev_72.1-3_arm64.deb ... Unpacking libicu-dev:arm64 (72.1-3) ... Selecting previously unselected package libboost-regex1.74-dev:arm64. Preparing to unpack .../53-libboost-regex1.74-dev_1.74.0+ds1-21_arm64.deb ... Unpacking libboost-regex1.74-dev:arm64 (1.74.0+ds1-21) ... Selecting previously unselected package libboost-iostreams1.74-dev:arm64. Preparing to unpack .../54-libboost-iostreams1.74-dev_1.74.0+ds1-21_arm64.deb ... Unpacking libboost-iostreams1.74-dev:arm64 (1.74.0+ds1-21) ... Selecting previously unselected package libboost-iostreams-dev:arm64. Preparing to unpack .../55-libboost-iostreams-dev_1.74.0.3_arm64.deb ... Unpacking libboost-iostreams-dev:arm64 (1.74.0.3) ... Selecting previously unselected package libbpp-core4:arm64. Preparing to unpack .../56-libbpp-core4_2.4.1-9_arm64.deb ... Unpacking libbpp-core4:arm64 (2.4.1-9) ... Selecting previously unselected package libbpp-core-dev:arm64. Preparing to unpack .../57-libbpp-core-dev_2.4.1-9_arm64.deb ... Unpacking libbpp-core-dev:arm64 (2.4.1-9) ... Selecting previously unselected package libbpp-seq12:arm64. Preparing to unpack .../58-libbpp-seq12_2.4.1-9_arm64.deb ... Unpacking libbpp-seq12:arm64 (2.4.1-9) ... Selecting previously unselected package libbpp-phyl12:arm64. Preparing to unpack .../59-libbpp-phyl12_2.4.1-8_arm64.deb ... Unpacking libbpp-phyl12:arm64 (2.4.1-8) ... Selecting previously unselected package libbpp-seq-dev:arm64. Preparing to unpack .../60-libbpp-seq-dev_2.4.1-9_arm64.deb ... Unpacking libbpp-seq-dev:arm64 (2.4.1-9) ... Selecting previously unselected package libbpp-phyl-dev:arm64. Preparing to unpack .../61-libbpp-phyl-dev_2.4.1-8_arm64.deb ... Unpacking libbpp-phyl-dev:arm64 (2.4.1-8) ... Selecting previously unselected package libbpp-seq-omics3:arm64. Preparing to unpack .../62-libbpp-seq-omics3_2.4.1-9_arm64.deb ... Unpacking libbpp-seq-omics3:arm64 (2.4.1-9) ... Selecting previously unselected package libbpp-phyl-omics3:arm64. Preparing to unpack .../63-libbpp-phyl-omics3_2.4.1-4_arm64.deb ... Unpacking libbpp-phyl-omics3:arm64 (2.4.1-4) ... Selecting previously unselected package libbpp-seq-omics-dev:arm64. Preparing to unpack .../64-libbpp-seq-omics-dev_2.4.1-9_arm64.deb ... Unpacking libbpp-seq-omics-dev:arm64 (2.4.1-9) ... Selecting previously unselected package libbpp-phyl-omics-dev:arm64. Preparing to unpack .../65-libbpp-phyl-omics-dev_2.4.1-4_arm64.deb ... Unpacking libbpp-phyl-omics-dev:arm64 (2.4.1-4) ... Selecting previously unselected package libbz2-dev:arm64. Preparing to unpack .../66-libbz2-dev_1.0.8-5+b1_arm64.deb ... Unpacking libbz2-dev:arm64 (1.0.8-5+b1) ... Selecting previously unselected package libtext-unidecode-perl. Preparing to unpack .../67-libtext-unidecode-perl_1.30-3_all.deb ... Unpacking libtext-unidecode-perl (1.30-3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../68-libxml-namespacesupport-perl_1.12-2_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-2) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../69-libxml-sax-base-perl_1.09-3_all.deb ... Unpacking libxml-sax-base-perl (1.09-3) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../70-libxml-sax-perl_1.02+dfsg-3_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-3) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../71-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1_arm64.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... Selecting previously unselected package tex-common. Preparing to unpack .../72-tex-common_6.18_all.deb ... Unpacking tex-common (6.18) ... Selecting previously unselected package texinfo. Preparing to unpack .../73-texinfo_6.8-6+b1_arm64.deb ... Unpacking texinfo (6.8-6+b1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../74-zlib1g-dev_1%3a1.2.13.dfsg-1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.13.dfsg-1) ... Setting up libexpat1:arm64 (2.5.0-1) ... Setting up libpipeline1:arm64 (1.5.7-1) ... Setting up libpsl5:arm64 (0.21.2-1) ... Setting up libboost1.74-dev:arm64 (1.74.0+ds1-21) ... Setting up libicu72:arm64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b6) ... Setting up libnghttp2-14:arm64 (1.52.0-1) ... Setting up libmagic1:arm64 (1:5.44-3) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up autotools-dev (20220109.1) ... Setting up libuv1:arm64 (1.44.2-1) ... Setting up libbpp-core4:arm64 (2.4.1-9) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libboost-regex1.74.0:arm64 (1.74.0+ds1-21) ... Setting up libproc2-0:arm64 (2:4.0.2-3) ... Setting up autopoint (0.21-12) ... Setting up libjsoncpp25:arm64 (1.9.5-4) ... Setting up icu-devtools (72.1-3) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg-10) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:arm64 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up librhash0:arm64 (1.4.3-3) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:arm64 (1.10.0-3+b1) ... Setting up cmake-data (3.25.1-1) ... Setting up libtext-unidecode-perl (1.30-3) ... Setting up libbpp-seq12:arm64 (2.4.1-9) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up libicu-dev:arm64 (72.1-3) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.2) ... Setting up libbz2-dev:arm64 (1.0.8-5+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libbpp-phyl12:arm64 (2.4.1-8) ... Setting up gettext (0.21-12) ... Setting up libbpp-seq-omics3:arm64 (2.4.1-9) ... Setting up libtool (2.4.7-5) ... Setting up libarchive13:arm64 (3.6.2-1) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libbpp-core-dev:arm64 (2.4.1-9) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up libboost-regex1.74-dev:arm64 (1.74.0+ds1-21) ... Setting up groff-base (1.22.4-10) ... Setting up libbpp-phyl-omics3:arm64 (2.4.1-4) ... Setting up libcurl4:arm64 (7.88.1-10) ... Setting up libbpp-seq-dev:arm64 (2.4.1-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libboost-iostreams1.74-dev:arm64 (1.74.0+ds1-21) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libbpp-phyl-dev:arm64 (2.4.1-8) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libbpp-seq-omics-dev:arm64 (2.4.1-9) ... Setting up cmake (3.25.1-1) ... Setting up libbpp-phyl-omics-dev:arm64 (2.4.1-4) ... Setting up debhelper (13.11.4) ... Setting up libboost-iostreams-dev:arm64 (1.74.0.3) ... Setting up texinfo (6.8-6+b1) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/maffilter-1.3.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../maffilter_1.3.1+dfsg-4_source.changes dpkg-buildpackage: info: source package maffilter dpkg-buildpackage: info: source version 1.3.1+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/maffilter-1.3.1+dfsg' dh_auto_configure -- -DCMAKE_BUILD_TYPE=RelWithDebInfo cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DCMAKE_BUILD_TYPE=RelWithDebInfo .. CMake Deprecation Warning at CMakeLists.txt:6 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The CXX compiler identification is GNU 12.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found /usr/bin/gzip compression program, using file extension .gz -- bpp-core 4.1.0 found: -- static lib: /usr/lib/aarch64-linux-gnu/libbpp-core.a -- shared lib: /usr/lib/aarch64-linux-gnu/libbpp-core.so.4.1.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/aarch64-linux-gnu/libbpp-seq.a -- shared lib: /usr/lib/aarch64-linux-gnu/libbpp-seq.so.12.0.0 -- includes: /usr/include -- bpp-seq-omics 3.0.0 found: -- static lib: /usr/lib/aarch64-linux-gnu/libbpp-seq-omics.a -- shared lib: /usr/lib/aarch64-linux-gnu/libbpp-seq-omics.so.3.0.0 -- includes: /usr/include -- bpp-phyl 12.0.0 found: -- static lib: /usr/lib/aarch64-linux-gnu/libbpp-phyl.a -- shared lib: /usr/lib/aarch64-linux-gnu/libbpp-phyl.so.12.0.0 -- includes: /usr/include -- bpp-phyl-omics 3.0.0 found: -- static lib: /usr/lib/aarch64-linux-gnu/libbpp-phyl-omics.a -- shared lib: /usr/lib/aarch64-linux-gnu/libbpp-phyl-omics.so.3.0.0 -- includes: /usr/include -- Found Boost: /usr/lib/aarch64-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.34.0") found components: iostreams -- Boost libraries found here: includes: /usr/include dynamic libraries: Boost::iostreams -- Library z found here: includes: /usr/include dynamic libraries: /usr/lib/aarch64-linux-gnu/libz.so -- Library bz2 found here: includes: /usr/include dynamic libraries: /usr/lib/aarch64-linux-gnu/libbz2.so -- Found /usr/bin/makeinfo: 'info' and 'html' target enabled (builds info/html doc) -- Found texi2dvi: 'pdf' target enabled (builds pdf doc) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg' dh_auto_build cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/maffilter-1.3.1+dfsg -B/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/CMakeFiles /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/depend make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/MafFilter /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/MafFilter /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/MafFilter/CMakeFiles/maffilter.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/doc /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/doc /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/doc/CMakeFiles/info.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/man /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/man /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/man/CMakeFiles/man.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/build make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' [ 12%] Generating info page [ 25%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o [ 37%] Compressing manpage maffilter.1 cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/doc && /usr/bin/makeinfo --no-split -o /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/doc/maffilter.info /build/maffilter-1.3.1+dfsg/doc/maffilter.texi cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/maffilter-1.3.1+dfsg/man/maffilter.1 > /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/man/maffilter.1.gz cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/MafFilter && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -MD -MT MafFilter/CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o -MF CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o.d -o CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/SystemCallMafIterator.cpp [ 50%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/MafFilter.cpp.o cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/MafFilter && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -MD -MT MafFilter/CMakeFiles/maffilter.dir/MafFilter.cpp.o -MF CMakeFiles/maffilter.dir/MafFilter.cpp.o.d -o CMakeFiles/maffilter.dir/MafFilter.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/MafFilter.cpp make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' [ 62%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/MafFilter && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -MD -MT MafFilter/CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o -MF CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o.d -o CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/OutputAsFeaturesMafIterator.cpp [ 75%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/MafFilter && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -MD -MT MafFilter/CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o -MF CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o.d -o CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/TreeBuildingSystemCallMafIterator.cpp [ 75%] Built target man [ 87%] Compressing info page cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/doc && /usr/bin/gzip -c -n -9 /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/doc/maffilter.info > /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/doc/maffilter.info.gz make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' [ 87%] Built target info [100%] Linking CXX executable maffilter cd /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/MafFilter && /usr/bin/cmake -E cmake_link_script CMakeFiles/maffilter.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/maffilter.dir/MafFilter.cpp.o CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o -o maffilter /usr/lib/aarch64-linux-gnu/libbpp-phyl-omics.so.3.0.0 /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.74.0 -lz -lbz2 /usr/lib/aarch64-linux-gnu/libbpp-seq-omics.so.3.0.0 /usr/lib/aarch64-linux-gnu/libbpp-phyl.so.12.0.0 /usr/lib/aarch64-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/aarch64-linux-gnu/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' [100%] Built target maffilter make[2]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/maffilter-1.3.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/maffilter-1.3.1+dfsg -B/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/maffilter-1.3.1+dfsg/debian/tmp/usr/bin/maffilter -- Installing: /build/maffilter-1.3.1+dfsg/debian/tmp/usr/share/info/maffilter.info.gz -- Installing: /build/maffilter-1.3.1+dfsg/debian/tmp/usr/share/man/man1/maffilter.1.gz make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-aarch64-linux-gnu' dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/maffilter-1.3.1+dfsg' dh_fixperms find debian/*/usr/share -name "*.bpp" -executable -exec chmod -x \{\} \; make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg' dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'maffilter-dbgsym' in '../maffilter-dbgsym_1.3.1+dfsg-4_arm64.deb'. dpkg-deb: building package 'maffilter-examples' in '../maffilter-examples_1.3.1+dfsg-4_all.deb'. dpkg-deb: building package 'maffilter' in '../maffilter_1.3.1+dfsg-4_arm64.deb'. dpkg-genbuildinfo --build=binary -O../maffilter_1.3.1+dfsg-4_arm64.buildinfo dpkg-genchanges --build=binary -O../maffilter_1.3.1+dfsg-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16235 and its subdirectories I: Current time: Wed Aug 7 21:13:02 -12 2024 I: pbuilder-time-stamp: 1723108382 Fri Jul 7 02:50:11 UTC 2023 I: 1st build successful. Starting 2nd build on remote node codethink14-arm64.debian.net. Fri Jul 7 02:50:11 UTC 2023 I: Preparing to do remote build '2' on codethink14-arm64.debian.net. Fri Jul 7 02:55:01 UTC 2023 I: Deleting $TMPDIR on codethink14-arm64.debian.net. Fri Jul 7 02:55:02 UTC 2023 I: maffilter_1.3.1+dfsg-4_arm64.changes: Format: 1.8 Date: Thu, 24 Nov 2022 12:20:55 +0100 Source: maffilter Binary: maffilter maffilter-dbgsym maffilter-examples Architecture: arm64 all Version: 1.3.1+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: maffilter - process genome alignment in the Multiple Alignment Format maffilter-examples - process genome alignment in the Multiple Alignment Format (exampl Changes: maffilter (1.3.1+dfsg-4) unstable; urgency=medium . * Fix watch file * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: 58b8950869ef6f48b34628b5dda3c2c1a82c0366 3446060 maffilter-dbgsym_1.3.1+dfsg-4_arm64.deb 9a55ddef1ee9c7bac1ce9a4bd91bc5d852b4dd98 79214344 maffilter-examples_1.3.1+dfsg-4_all.deb d3151828c574acaf8c90668e7866b9cefc722bc2 7131 maffilter_1.3.1+dfsg-4_arm64.buildinfo 77bade790162b870f28799b5490feef1526f74a5 238576 maffilter_1.3.1+dfsg-4_arm64.deb Checksums-Sha256: 19045effc035f0821c93074230a27e4bd61c871f0e1b40c3640254b23a19dbd8 3446060 maffilter-dbgsym_1.3.1+dfsg-4_arm64.deb 16a25c6cdbe6b89bb6520bb6f192e75abf348602f98b5481f37d8a13d56ee8cc 79214344 maffilter-examples_1.3.1+dfsg-4_all.deb ceb258ede44604352babecfb541391b3b8c98b338de23c039608b920071c1b54 7131 maffilter_1.3.1+dfsg-4_arm64.buildinfo a1887a76f69e88deb224062b094e7c4f1ff1ea86cafca62e2f72bf167962144b 238576 maffilter_1.3.1+dfsg-4_arm64.deb Files: b68aee548b97b415dc11bdfd394a77ca 3446060 debug optional maffilter-dbgsym_1.3.1+dfsg-4_arm64.deb 2b41dc7ab240f99c09cba77a4bca97a0 79214344 science optional maffilter-examples_1.3.1+dfsg-4_all.deb 1742558d8c3566e615c61892c0d12205 7131 science optional maffilter_1.3.1+dfsg-4_arm64.buildinfo 24bad33909298135e149b3d1ba59b3f1 238576 science optional maffilter_1.3.1+dfsg-4_arm64.deb Fri Jul 7 02:55:06 UTC 2023 I: diffoscope 243 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.b0GIfp3Y/maffilter_1.3.1+dfsg-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.b0GIfp3Y/maffilter_1.3.1+dfsg-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.b0GIfp3Y/maffilter_1.3.1+dfsg-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.b0GIfp3Y/b1/maffilter_1.3.1+dfsg-4_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.b0GIfp3Y/b2/maffilter_1.3.1+dfsg-4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 1.346s) 1.346s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.909s) 0.909s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.001s) 0.001s 1 call specialize Fri Jul 7 02:55:15 UTC 2023 I: diffoscope 243 found no differences in the changes files, and a .buildinfo file also exists. Fri Jul 7 02:55:15 UTC 2023 I: maffilter from bookworm built successfully and reproducibly on arm64. Fri Jul 7 02:55:16 UTC 2023 I: Submitting .buildinfo files to external archives: Fri Jul 7 02:55:16 UTC 2023 I: Submitting 8.0K b1/maffilter_1.3.1+dfsg-4_arm64.buildinfo.asc Fri Jul 7 02:55:17 UTC 2023 I: Submitting 8.0K b2/maffilter_1.3.1+dfsg-4_arm64.buildinfo.asc Fri Jul 7 02:55:18 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Jul 7 02:55:18 UTC 2023 I: Done submitting .buildinfo files. Fri Jul 7 02:55:18 UTC 2023 I: Removing signed maffilter_1.3.1+dfsg-4_arm64.buildinfo.asc files: removed './b1/maffilter_1.3.1+dfsg-4_arm64.buildinfo.asc' removed './b2/maffilter_1.3.1+dfsg-4_arm64.buildinfo.asc'