Wed Apr 26 14:58:03 UTC 2023 I: starting to build debichem/bookworm/arm64 on jenkins on '2023-04-26 14:57' Wed Apr 26 14:58:03 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_28/12590/console.log Wed Apr 26 14:58:03 UTC 2023 I: Downloading source for bookworm/debichem=0.0.12 --2023-04-26 14:58:03-- http://cdn-fastly.deb.debian.org/debian/pool/main/d/debichem/debichem_0.0.12.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2833 (2.8K) [text/prs.lines.tag] Saving to: ‘debichem_0.0.12.dsc’ 0K .. 100% 216M=0s 2023-04-26 14:58:04 (216 MB/s) - ‘debichem_0.0.12.dsc’ saved [2833/2833] Wed Apr 26 14:58:04 UTC 2023 I: debichem_0.0.12.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (native) Source: debichem Binary: debichem-tasks, debichem-analytical-biochemistry, debichem-cheminformatics, debichem-crystallography, debichem-development, debichem-input-generation-output-processing, debichem-molecular-abinitio, debichem-molecular-dynamics, debichem-molecular-modelling, debichem-periodic-abinitio, debichem-semiempirical, debichem-view-edit-2d, debichem-visualisation Architecture: all Version: 0.0.12 Maintainer: Debichem Team Uploaders: Michael Banck , Andreas Tille Homepage: https://salsa.debian.org/blends-team/debichem Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/blends-team/debichem Vcs-Git: https://salsa.debian.org/blends-team/debichem.git Build-Depends: debhelper-compat (= 12) Build-Depends-Indep: blends-dev (>= 0.6.95) Package-List: debichem-analytical-biochemistry deb metapackages optional arch=all debichem-cheminformatics deb metapackages optional arch=all debichem-crystallography deb metapackages optional arch=all debichem-development deb metapackages optional arch=all debichem-input-generation-output-processing deb metapackages optional arch=all debichem-molecular-abinitio deb metapackages optional arch=all debichem-molecular-dynamics deb metapackages optional arch=all debichem-molecular-modelling deb metapackages optional arch=all debichem-periodic-abinitio deb metapackages optional arch=all debichem-semiempirical deb metapackages optional arch=all debichem-tasks deb misc optional arch=all debichem-view-edit-2d deb metapackages optional arch=all debichem-visualisation deb metapackages optional arch=all Checksums-Sha1: 66afe25765c2c8ec3674789bb4a8e7c6142b8c59 16488 debichem_0.0.12.tar.xz Checksums-Sha256: a7c2fdf38a4666a9bd2a3b2f669bcd4cbefb6ea0e1a85baad4f6d382e7f9de00 16488 debichem_0.0.12.tar.xz Files: 7deae28683dcf1421fef505e5a3a5157 16488 debichem_0.0.12.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEnKh3dJ+rLk+paGLs3GhqJ7Q0gbAFAmPbhMUACgkQ3GhqJ7Q0 gbDxLQ/+Pwo9gnYakcl4YkiQGj7Mz3G5M4Bbh+G5vF09eVzuIn/tNZCgTBbyD7x3 cnH2UAXKrAyVtM4pGGPIzPT7JS7vTnAJT3HJjox/OCwOzcar9tJgv//6j7MjIySN j7nrF5l6W7srucZ9UdX8pJgYE9mdVzPZd4KsrSq88Gy1Tut8FnRyJBxujfqRk9Tr XxHWYRWscyNp9b3J2RWL8bdHCaJ6I8XZFx8RDmTVaOwANsmkkgnVp+OeY6txwJ58 bVoiKwg7rbz6U5BDqYiysUiq2zlzM252ln/DqU2RrS/9QOQXKrtaYduu5foV/Qhd GXQ7x7tX9UEPIKFMGENJ69eJRJj+dlAk33yg3DJlAa0eeiUOeTR9jYfGyTkYT5ge P/AmJE1WqS/y+SDzVp2t/x0CcybGZOw80ZPq+22MuknNSNGdtdmagilNQbznR0X/ 5ZYCoqJmvfTNkaWr9kJNRlLHCYJ7O1iqi9+kvw4qsjLZpm6rqckONIPMagTXn3OH ekpVkiQqCpoDdT+MA4ZQax/0eOQZiRQbQqUfFieOSV5zVUeLoIKP+AYwe0jcJu+U PjAS7CLgOQ3iCKbDX6terM5mGBhzMEHOxFVKqFfwb5ywE9ShNcfn8EIZqy88BbhS di/4LqL71t2fIXW3cz60nV7aMwwrkDJkNnrmU7pQ08C75qwha88= =KK3I -----END PGP SIGNATURE----- Wed Apr 26 14:58:04 UTC 2023 I: Checking whether the package is not for us Wed Apr 26 14:58:04 UTC 2023 I: Starting 1st build on remote node codethink15-arm64.debian.net. Wed Apr 26 14:58:04 UTC 2023 I: Preparing to do remote build '1' on codethink15-arm64.debian.net. Wed Apr 26 14:59:21 UTC 2023 I: Deleting $TMPDIR on codethink15-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue May 28 09:21:10 -12 2024 I: pbuilder-time-stamp: 1716931270 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [debichem_0.0.12.dsc] I: copying [./debichem_0.0.12.tar.xz] I: Extracting source gpgv: Signature made Wed Feb 1 21:39:17 2023 -12 gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./debichem_0.0.12.dsc: no acceptable signature found dpkg-source: info: extracting debichem in debichem-0.0.12 dpkg-source: info: unpacking debichem_0.0.12.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/26049/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='26049' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RodEjowN/pbuilderrc_g7mp --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RodEjowN/b1 --logfile b1/build.log debichem_0.0.12.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink15-arm64 4.15.0-209-generic #220-Ubuntu SMP Tue Mar 21 19:52:44 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 24 04:47 /bin -> usr/bin I: user script /srv/workspace/pbuilder/26049/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), blends-dev (>= 0.6.95) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on blends-dev (>= 0.6.95); however: Package blends-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blends-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} distro-info-data{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python-apt-common{a} python3{a} python3-apt{a} python3-blends{a} python3-chardet{a} python3-debian{a} python3-minimal{a} python3-pkg-resources{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl iso-codes javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lsb-release lynx python3-psycopg2 wget zstd 0 packages upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 25.1 MB of archives. After unpacking 104 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-minimal arm64 3.11.2-6 [806 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 python3.11-minimal arm64 3.11.2-6 [1858 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 python3-minimal arm64 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 libreadline8 arm64 8.2-1.3 [155 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-stdlib arm64 3.11.2-6 [1747 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 python3.11 arm64 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 libpython3-stdlib arm64 3.11.2-1+b1 [9296 B] Get: 11 http://deb.debian.org/debian bookworm/main arm64 python3 arm64 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 32 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 34 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 41 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 42 http://deb.debian.org/debian bookworm/main arm64 python-apt-common all 2.5.3 [63.6 kB] Get: 43 http://deb.debian.org/debian bookworm/main arm64 distro-info-data all 0.57 [5744 B] Get: 44 http://deb.debian.org/debian bookworm/main arm64 python3-apt arm64 2.5.3 [152 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 python3-chardet all 5.1.0+dfsg-2 [110 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 python3-debian all 0.1.49 [115 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 python3-blends all 0.7.5 [42.2 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 blends-dev all 0.7.5 [33.3 kB] Fetched 25.1 MB in 1s (36.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.2-6) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.5.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_arm64.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:arm64 (3.11.2-6) ... Setting up libexpat1:arm64 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19932 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_arm64.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../3-libreadline8_8.2-1.3_arm64.deb ... Unpacking libreadline8:arm64 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_arm64.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20366 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.2-1+b1_arm64.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-4_all.deb ... 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Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up python-apt-common (2.5.3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.2) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:arm64 (8.2-1.3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.2-6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:arm64 (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-apt (2.5.3) ... Setting up python3-chardet (5.1.0+dfsg-2) ... Setting up python3-debian (0.1.49) ... Setting up python3-blends (0.7.5) ... Setting up blends-dev (0.7.5) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/debichem-0.0.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../debichem_0.0.12_source.changes dpkg-buildpackage: info: source package debichem dpkg-buildpackage: info: source version 0.0.12 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael Banck dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/debichem-0.0.12' # call make clean instead of distclean make clean make[2]: Entering directory '/build/debichem-0.0.12' rm -rf tmp rm -f tasks/*~ rm -rf tasksel rm -f packages.txt by_vote packages-sorted.txt rm -f debian/*-config.postinst debian/*-config.preinst debian/*-config.postrm debian/*-config.prerm make[2]: Leaving directory '/build/debichem-0.0.12' make[1]: Leaving directory '/build/debichem-0.0.12' debian/rules override_dh_clean make[1]: Entering directory '/build/debichem-0.0.12' # hmmm, that would kill debian/control - so don't do this! # /usr/bin/make -f /usr/share/blends-dev/Makefile clean # Clear apt-get cache rm -rf tmp # Remove backup files from source tarball rm -f tasks/*~ # Remove auto generated post{inst,rm} scripts; but only if an according *.stub file exists for task in `ls tasks | grep -v '^[a-z]*:$*' | grep -v '^$'` ; do \ rm -f debian/debichem-${task}.postinst debian/debichem-${task}.prerm ; \ done # rm -f debian/debichem-*.postinst debian/debichem-*.prerm debian/debichem-*.postrm debian/debichem-*.preinst # remove auto generated files for config package rm -f debian/debichem-config.templates debian/debichem-config.config \ debian/debichem-config.install debian/debichem-config.links \ debian/90debichem-config # remove auto generated debconf template translations rm -rf debian/po # remove possibly remaining debhelper files rm -f debian/debichem-*.debhelper.log dh_clean make[1]: Leaving directory '/build/debichem-0.0.12' debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/debichem-0.0.12' # do nothing, we just called the make install target in advance # and want to build the packages without network access make[1]: Leaving directory '/build/debichem-0.0.12' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install debian/rules override_dh_install make[1]: Entering directory '/build/debichem-0.0.12' /usr/share/blends-dev/blend-install-helper dh_install debichem-tasks.desc usr/share/tasksel/descs make[1]: Leaving directory '/build/debichem-0.0.12' debian/rules override_dh_installdocs make[1]: Entering directory '/build/debichem-0.0.12' dh_installdocs make[1]: Leaving directory '/build/debichem-0.0.12' dh_installchangelogs dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debichem-tasks' in '../debichem-tasks_0.0.12_all.deb'. dpkg-deb: building package 'debichem-molecular-modelling' in '../debichem-molecular-modelling_0.0.12_all.deb'. dpkg-deb: building package 'debichem-semiempirical' in '../debichem-semiempirical_0.0.12_all.deb'. dpkg-deb: building package 'debichem-development' in '../debichem-development_0.0.12_all.deb'. dpkg-deb: building package 'debichem-visualisation' in '../debichem-visualisation_0.0.12_all.deb'. dpkg-deb: building package 'debichem-molecular-abinitio' in '../debichem-molecular-abinitio_0.0.12_all.deb'. dpkg-deb: building package 'debichem-cheminformatics' in '../debichem-cheminformatics_0.0.12_all.deb'. dpkg-deb: building package 'debichem-molecular-dynamics' in '../debichem-molecular-dynamics_0.0.12_all.deb'. dpkg-deb: building package 'debichem-crystallography' in '../debichem-crystallography_0.0.12_all.deb'. dpkg-deb: building package 'debichem-view-edit-2d' in '../debichem-view-edit-2d_0.0.12_all.deb'. dpkg-deb: building package 'debichem-periodic-abinitio' in '../debichem-periodic-abinitio_0.0.12_all.deb'. dpkg-deb: building package 'debichem-analytical-biochemistry' in '../debichem-analytical-biochemistry_0.0.12_all.deb'. dpkg-deb: building package 'debichem-input-generation-output-processing' in '../debichem-input-generation-output-processing_0.0.12_all.deb'. dpkg-genbuildinfo --build=binary -O../debichem_0.0.12_arm64.buildinfo dpkg-genchanges --build=binary -O../debichem_0.0.12_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/26049 and its subdirectories I: Current time: Tue May 28 09:22:20 -12 2024 I: pbuilder-time-stamp: 1716931340 Wed Apr 26 14:59:22 UTC 2023 I: 1st build successful. Starting 2nd build on remote node codethink16-arm64.debian.net. Wed Apr 26 14:59:22 UTC 2023 I: Preparing to do remote build '2' on codethink16-arm64.debian.net. Wed Apr 26 15:00:10 UTC 2023 I: Deleting $TMPDIR on codethink16-arm64.debian.net. Wed Apr 26 15:00:10 UTC 2023 I: debichem_0.0.12_arm64.changes: Format: 1.8 Date: Thu, 02 Feb 2023 10:39:05 +0100 Source: debichem Binary: debichem-analytical-biochemistry debichem-cheminformatics debichem-crystallography debichem-development debichem-input-generation-output-processing debichem-molecular-abinitio debichem-molecular-dynamics debichem-molecular-modelling debichem-periodic-abinitio debichem-semiempirical debichem-tasks debichem-view-edit-2d debichem-visualisation Architecture: all Version: 0.0.12 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Michael Banck Description: debichem-analytical-biochemistry - DebiChem Analytical BioChemistry debichem-cheminformatics - DebiChem Cheminformatics debichem-crystallography - DebiChem crystallography debichem-development - DebiChem C/C++/Fortran Development debichem-input-generation-output-processing - DebiChem input preparation and output processing debichem-molecular-abinitio - DebiChem Molecular Ab Initio Calculations debichem-molecular-dynamics - DebiChem Molecular Dynamics debichem-molecular-modelling - DebiChem 3D Molecular Modelling and Visualization debichem-periodic-abinitio - DebiChem Periodic Ab Initio Calculations debichem-semiempirical - DebiChem Semi Empirical debichem-tasks - DebiChem tasks for tasksel debichem-view-edit-2d - DebiChem chemical formular/structure editors debichem-visualisation - DebiChem 3D Viewers Changes: debichem (0.0.12) unstable; urgency=medium . [ Michael Banck ] * tasks/semiempirical: Added mopac and xtb. * tasks/molecular-abinitio: Added openmolcas. * tasks/development: Added libdbcsr-dev and libbtas-dev. . [ Andreas Tille ] * tasks/analytical-biochemistry: Added comet-ms Checksums-Sha1: 7304f667022fae907ef557040ae2d0eb10a12e49 5000 debichem-analytical-biochemistry_0.0.12_all.deb 01612b1e10a7a84cfaced7fc56d0f2723f2f3753 4520 debichem-cheminformatics_0.0.12_all.deb 67c7429121f3fc443218cdf6fe76aff3afc0e7a9 4520 debichem-crystallography_0.0.12_all.deb a53897e4a7a50ff6bd09a571e372058b3a704376 4560 debichem-development_0.0.12_all.deb 284b7bc08b0fcd7333f44faf659e9975cbac8513 4636 debichem-input-generation-output-processing_0.0.12_all.deb 3132fb81a69c93285a8f62943b67a69ee75f16b0 4568 debichem-molecular-abinitio_0.0.12_all.deb 9cfa6989324954ad7033a8750f450993996c5624 4548 debichem-molecular-dynamics_0.0.12_all.deb e0901fca16e14869bd7af13a52b6c91fd00eea4d 4548 debichem-molecular-modelling_0.0.12_all.deb a982b615870c78570fcc6d18f343a42c38e92482 4564 debichem-periodic-abinitio_0.0.12_all.deb ceaed3c74c07641252797d4d0a83002d9fc8f369 4508 debichem-semiempirical_0.0.12_all.deb e55aae200570b14343e8fa8f0c20cb21655ed996 3352 debichem-tasks_0.0.12_all.deb 47e42cc5adb5cb6f2a6cce96d973e15e21ae26e2 4560 debichem-view-edit-2d_0.0.12_all.deb 9e62a73c438365eada920107d9e2d3ac7262b4b2 4588 debichem-visualisation_0.0.12_all.deb 0469066bf035ebc0f8dd06a1accfecef763cdcac 9398 debichem_0.0.12_arm64.buildinfo Checksums-Sha256: 93bcf5313a211ddee96a32b9db9e039d13a7e88c3198324c3e0923e21a0cf010 5000 debichem-analytical-biochemistry_0.0.12_all.deb a2bfdcf824ef9761436506beacb1d4915f20ef4aef0fbe0a69511b4835aedf06 4520 debichem-cheminformatics_0.0.12_all.deb 63d0fec2264eb93838feffb4858bb66e66a2333f52b561183a5f29b15b5975ea 4520 debichem-crystallography_0.0.12_all.deb 89465f0d35ce94bee2a6e68e949c9b89c59207dabc6de8139ec93fdbf3b9cc86 4560 debichem-development_0.0.12_all.deb 0e882a8354077cb6fe5ac636246c1a5d50d403a9c22909a72acf7e745ad8828c 4636 debichem-input-generation-output-processing_0.0.12_all.deb 93a52fc2a1af4aaa6bae51bdbf1af67e523121326a3db0c8e98c96ea8503422e 4568 debichem-molecular-abinitio_0.0.12_all.deb b18673329341151eb19473fad14dcd13166531e03e3d9a7f4c63b5cfed58c120 4548 debichem-molecular-dynamics_0.0.12_all.deb 9bcba8d3490327bf3b56a6f2a3b613bb826d75870b1901ee9cbb31390b7e6540 4548 debichem-molecular-modelling_0.0.12_all.deb e21a845277a8f3cf78727b71ed576fe248eb0ab23d443519b2e13258834f4b2f 4564 debichem-periodic-abinitio_0.0.12_all.deb c67a54e3ad04acb79396ed24aabef02fa124ab8c219bf6cdd34a46d9c30193b7 4508 debichem-semiempirical_0.0.12_all.deb ce4e2befe9ed94f2755d5958e185c957cbe8df24c5057c47eb235dbbbad159e7 3352 debichem-tasks_0.0.12_all.deb 93e8514aad03a6aec46c47b40c21f3692d0851e04e7e564581140489f693b32f 4560 debichem-view-edit-2d_0.0.12_all.deb aef25b3b072f56f6dc7d2ba8813d19583476af89acc173035f9b9cb36614f416 4588 debichem-visualisation_0.0.12_all.deb 0cdf9fc3da4c2b0b5bfd012a7f6fe25734aed394da2be3f05f7a7c6751ba087d 9398 debichem_0.0.12_arm64.buildinfo Files: b953bbc9293141a23730da11f803ad56 5000 metapackages optional debichem-analytical-biochemistry_0.0.12_all.deb 2e645ec3aa5433e7c944f4989af1998b 4520 metapackages optional debichem-cheminformatics_0.0.12_all.deb afbcc978b203588722c48ca2756318e1 4520 metapackages optional debichem-crystallography_0.0.12_all.deb c58537560e02a4f9b3ee78b6e4e70f94 4560 metapackages optional debichem-development_0.0.12_all.deb cb62427b0daae94a18dbb7cc554c7190 4636 metapackages optional debichem-input-generation-output-processing_0.0.12_all.deb 01894f5b4470b2cece8de03c0c0be5a4 4568 metapackages optional debichem-molecular-abinitio_0.0.12_all.deb d9200035f6b3a5fa946b39622244820a 4548 metapackages optional debichem-molecular-dynamics_0.0.12_all.deb fcce27b5b0bf716df25a6d85fa2fa49f 4548 metapackages optional debichem-molecular-modelling_0.0.12_all.deb 19b06df1bbfc7fbb636e6d0d689de04e 4564 metapackages optional debichem-periodic-abinitio_0.0.12_all.deb 1755d3946b9735e19ffee459cc32ae06 4508 metapackages optional debichem-semiempirical_0.0.12_all.deb ba812c0d66886f7c0846dd6f912bc9a7 3352 misc optional debichem-tasks_0.0.12_all.deb 7ee20ac56eb7647fed01acea1581e642 4560 metapackages optional debichem-view-edit-2d_0.0.12_all.deb 265db5e58d6c9273c3e22907dd5cce18 4588 metapackages optional debichem-visualisation_0.0.12_all.deb 884fe1770e3874585837757f6c102498 9398 misc optional debichem_0.0.12_arm64.buildinfo Wed Apr 26 15:00:11 UTC 2023 I: diffoscope 241 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.RodEjowN/debichem_0.0.12.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.RodEjowN/debichem_0.0.12.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.RodEjowN/debichem_0.0.12.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.RodEjowN/b1/debichem_0.0.12_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.RodEjowN/b2/debichem_0.0.12_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.401s) 0.401s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.032s) 0.031s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.001s) 0.001s 1 call specialize Wed Apr 26 15:00:13 UTC 2023 I: diffoscope 241 found no differences in the changes files, and a .buildinfo file also exists. Wed Apr 26 15:00:13 UTC 2023 I: debichem from bookworm built successfully and reproducibly on arm64. Wed Apr 26 15:00:14 UTC 2023 I: Submitting .buildinfo files to external archives: Wed Apr 26 15:00:14 UTC 2023 I: Submitting 12K b1/debichem_0.0.12_arm64.buildinfo.asc Wed Apr 26 15:00:15 UTC 2023 I: Submitting 12K b2/debichem_0.0.12_arm64.buildinfo.asc Wed Apr 26 15:00:16 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Apr 26 15:00:16 UTC 2023 I: Done submitting .buildinfo files. Wed Apr 26 15:00:16 UTC 2023 I: Removing signed debichem_0.0.12_arm64.buildinfo.asc files: removed './b1/debichem_0.0.12_arm64.buildinfo.asc' removed './b2/debichem_0.0.12_arm64.buildinfo.asc'