Sun May 7 19:48:33 UTC 2023 I: starting to build python-skbio/bookworm/amd64 on jenkins on '2023-05-07 19:48' Sun May 7 19:48:33 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_20/19018/console.log Sun May 7 19:48:33 UTC 2023 I: Downloading source for bookworm/python-skbio=0.5.8-4 --2023-05-07 19:48:34-- http://cdn-fastly.deb.debian.org/debian/pool/main/p/python-skbio/python-skbio_0.5.8-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2758 (2.7K) [text/prs.lines.tag] Saving to: ‘python-skbio_0.5.8-4.dsc’ 0K .. 100% 125M=0s 2023-05-07 19:48:34 (125 MB/s) - ‘python-skbio_0.5.8-4.dsc’ saved [2758/2758] Sun May 7 19:48:34 UTC 2023 I: python-skbio_0.5.8-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-skbio Binary: python-skbio-doc, python3-skbio Architecture: all amd64 arm64 mips64el ppc64el riscv64 Version: 0.5.8-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Kevin Murray Homepage: https://github.com/biocore/scikit-bio Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/python-skbio Vcs-Git: https://salsa.debian.org/med-team/python-skbio.git Testsuite: autopkgtest Testsuite-Triggers: python3-pytest Build-Depends: debhelper-compat (= 13), cython3, dh-python, python3-all-dev, python3-setuptools, python3-numpy, python3-matplotlib, python3-cachecontrol, python3-decorator, python3-h5py, python3-pandas, python3-scipy (>= 1.9), python3-ipython, python3-hdmedians (>= 0.14.1), python3-sklearn, python3-natsort, libssw-dev, sphinx-common, libsimde-dev Build-Depends-Arch: python3-lockfile , python3-pytest Build-Depends-Indep: python3-sphinx , python3-sphinx-bootstrap-theme , python3-doc , python-biom-format-doc , python-pandas-doc Package-List: python-skbio-doc deb doc optional arch=all profile=!nodoc python3-skbio deb python optional arch=amd64,arm64,mips64el,ppc64el,riscv64 Checksums-Sha1: aad4079b41b248383842f964af42c68861121b2e 3579407 python-skbio_0.5.8.orig.tar.gz 2db47ef0f90992e506013419492ae9b7e457870a 11648 python-skbio_0.5.8-4.debian.tar.xz Checksums-Sha256: 950dca0ce454cb1732a8d32655af825711ac01acbd596607560994f6991b129d 3579407 python-skbio_0.5.8.orig.tar.gz 31f3e303fe78df905290deb661f1b3843714aa168a08cfb9c8a962a3208c9ca0 11648 python-skbio_0.5.8-4.debian.tar.xz Files: 52cf1e2a241b04fb6e1de76dbdbcc163 3579407 python-skbio_0.5.8.orig.tar.gz e63fcd7ab98678dd2d43f4e8aad6b933 11648 python-skbio_0.5.8-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmPowo8ACgkQPCZ2P2xn 5uJKoQ/9H5lY1ltLl1YG8AbjVGY6EZSRrwqHgs9wKEkJeK/TBCpMb9fIlz2aFTaY tXkgVptdO5Smn4YFl7MasjOQBZvLaQY0r2xmKipIIg8z5r2OMlyGuoj+SaCB9pIm UcneEb7vNgaRL70JA1QjZnQJfVdPHrWJ+LCvvJ5bPcXrF+TC02beA52rCSBab83m BuwKfiVLuGkiFFIXTeUx8M1vMRjZ/PpoRvkG1t6PUujJXlYoTw/nOzlBnCZcrKsy oUb/iMKOw8mnIOO6NBUZo1Wvquk/TJD064EaiY8AY6gjuGGuSsQOey930RgaNLL9 fY532hI5cGUbbuwwFujud39w7ePE/Qbe92nPeEv9U1Rv3K88M75UbXvVaPYj+SGU hvgvAfHDUCzVfxgVoPFjkhrP2FmZbhAUU3rLihdXWt0sf3uyqFIWqA6xurOVA2wy 13iYegoyDEsLYaLbSsClUiO0xA7tMiuvtTvgpR3LpetlaqwqqnsQnevItfZVkpEI iI/0aBH9itM57XsXg03Lz9WmEPpREbjfewLcAC9BH7pv/rjBB6ASdVzqBQ7pbl6X FidZIo3z4jSYdV9DDAZd4p39SCdQrg0eJvjs95BcE6aOYQmHKb5be4TOKfVqxR+1 IDx/+t4eFCw49x/4kOS1byUungjjjvA+IbfAJ9CeTjvEsBb+VOs= =lPn+ -----END PGP SIGNATURE----- Sun May 7 19:48:34 UTC 2023 I: Checking whether the package is not for us Sun May 7 19:48:34 UTC 2023 I: Starting 1st build on remote node ionos15-amd64.debian.net. Sun May 7 19:48:34 UTC 2023 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Sun May 7 20:10:38 UTC 2023 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 8 14:11:36 -12 2024 I: pbuilder-time-stamp: 1717899096 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-skbio_0.5.8-4.dsc] I: copying [./python-skbio_0.5.8.orig.tar.gz] I: copying [./python-skbio_0.5.8-4.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Feb 11 22:42:23 2023 -12 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-skbio_0.5.8-4.dsc: no acceptable signature found dpkg-source: info: extracting python-skbio in python-skbio-0.5.8 dpkg-source: info: unpacking python-skbio_0.5.8.orig.tar.gz dpkg-source: info: unpacking python-skbio_0.5.8-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_packaged_simde dpkg-source: info: applying mathjax-path dpkg-source: info: applying 0002-use-libsww-as-library-not-embedded-src.patch dpkg-source: info: applying no_privacy_breach_logo.patch dpkg-source: info: applying local_inventory dpkg-source: info: applying modify-test.patch dpkg-source: info: applying numpy-1.24.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2142233/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='f3e0e48a7dd74661a5fefba7d8b8553d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2142233' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qP7wmvAC/pbuilderrc_buPs --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qP7wmvAC/b1 --logfile b1/build.log python-skbio_0.5.8-4.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos15-amd64 6.1.0-0.deb11.6-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.15-1~bpo11+1 (2023-03-16) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 2023 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 2023 more -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/2142233/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cython3, dh-python, python3-all-dev, python3-setuptools, python3-numpy, python3-matplotlib, python3-cachecontrol, python3-decorator, python3-h5py, python3-pandas, python3-scipy (>= 1.9), python3-ipython, python3-hdmedians (>= 0.14.1), python3-sklearn, python3-natsort, libssw-dev, sphinx-common, libsimde-dev, python3-sphinx, python3-sphinx-bootstrap-theme, python3-doc, python-biom-format-doc, python-pandas-doc, python3-lockfile, python3-pytest dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-cachecontrol; however: Package python3-cachecontrol is not installed. pbuilder-satisfydepends-dummy depends on python3-decorator; however: Package python3-decorator is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.9); however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-ipython; however: Package python3-ipython is not installed. pbuilder-satisfydepends-dummy depends on python3-hdmedians (>= 0.14.1); however: Package python3-hdmedians is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-natsort; however: Package python3-natsort is not installed. pbuilder-satisfydepends-dummy depends on libssw-dev; however: Package libssw-dev is not installed. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-bootstrap-theme; however: Package python3-sphinx-bootstrap-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-doc; however: Package python3-doc is not installed. pbuilder-satisfydepends-dummy depends on python-biom-format-doc; however: Package python-biom-format-doc is not installed. pbuilder-satisfydepends-dummy depends on python-pandas-doc; however: Package python-pandas-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-lockfile; however: Package python3-lockfile is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lyx{a} fonts-mathjax{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libcurl4{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhdf5-103-1{a} libhdf5-hl-100{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libopenblas-dev{a} libopenblas-pthread-dev{a} libopenblas0{a} libopenblas0-pthread{a} libopenjp2-7{a} libpipeline1{a} libpng16-16{a} libproc2-0{a} libpsl5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsimde-dev{a} libssh2-1{a} libssw-dev{a} libssw0{a} libsub-override-perl{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxsimd-dev{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} openssl{a} po-debconf{a} procps{a} python-babel-localedata{a} python-biom-format-doc{a} python-matplotlib-data{a} python-pandas-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-asttokens{a} python3-attr{a} python3-babel{a} python3-backcall{a} python3-beniget{a} python3-brotli{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-fonttools{a} python3-fs{a} python3-gast{a} python3-h5py{a} python3-h5py-serial{a} python3-hdmedians{a} python3-idna{a} python3-imagesize{a} python3-iniconfig{a} python3-ipython{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lockfile{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-pexpect{a} python3-pickleshare{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-ply{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-py{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-pythran{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-bootstrap-theme{a} python3-stack-data{a} python3-sympy{a} python3-threadpoolctl{a} python3-tk{a} python3-traitlets{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3.11{a} python3.11-dev{a} python3.11-doc{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules lynx psmisc publicsuffix python3-bottleneck python3-bs4 python3-html5lib python3-nose python3-numba python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 225 newly installed, 0 to remove and 0 not upgraded. Need to get 182 MB of archives. After unpacking 1204 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 11 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 sgml-base all 1.31 [15.4 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.8-1 [1407 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [1035 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5 [399 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.13-2 [781 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4.1 [593 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 blt amd64 2.5.3+dfsg-4.1 [14.9 kB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 cython3 amd64 0.29.32-2+b1 [1302 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 59 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 66 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-2 [131 kB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 dh-python all 5.20230130 [104 kB] Get: 72 http://deb.debian.org/debian bookworm/main amd64 xml-core all 0.18+nmu1 [23.8 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 docutils-common all 0.19+dfsg-6 [127 kB] Get: 74 http://deb.debian.org/debian bookworm/main amd64 fonts-lyx all 2.3.7-1 [186 kB] Get: 75 http://deb.debian.org/debian bookworm/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get: 77 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0+ds1-20 [9510 kB] Get: 79 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get: 80 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 83 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 84 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 85 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 86 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 87 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-9 [386 kB] Get: 88 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get: 89 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1 [150 kB] Get: 90 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get: 91 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 92 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2 [1398 kB] Get: 93 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 94 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get: 95 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get: 96 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get: 97 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get: 98 http://deb.debian.org/debian bookworm/main amd64 libimagequant0 amd64 2.17.0-1 [32.5 kB] Get: 99 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get: 100 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 101 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 102 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 103 http://deb.debian.org/debian bookworm/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 104 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 105 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 106 http://deb.debian.org/debian bookworm/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 107 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-4 [6709 kB] Get: 108 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get: 109 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [28.9 kB] Get: 110 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.14-2 [154 kB] Get: 111 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get: 112 http://deb.debian.org/debian bookworm/main amd64 liblzf1 amd64 3.6-3 [10.2 kB] Get: 113 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-4 [32.6 kB] Get: 114 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-4 [4971 kB] Get: 115 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-4 [44.9 kB] Get: 116 http://deb.debian.org/debian bookworm/main amd64 libopenjp2-7 amd64 2.5.0-1+b1 [189 kB] Get: 117 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6 [1988 kB] Get: 118 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 119 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6 [4738 kB] Get: 120 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B] Get: 121 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B] Get: 122 http://deb.debian.org/debian bookworm/main amd64 libqhull-r8.0 amd64 2020.2-5 [248 kB] Get: 123 http://deb.debian.org/debian bookworm/main amd64 libraqm0 amd64 0.7.0-4.1 [10.6 kB] Get: 124 http://deb.debian.org/debian bookworm/main amd64 libsimde-dev all 0.7.4~rc2-2 [377 kB] Get: 125 http://deb.debian.org/debian bookworm/main amd64 libssw0 amd64 1.1-13 [19.7 kB] Get: 126 http://deb.debian.org/debian bookworm/main amd64 libssw-dev amd64 1.1-13 [22.4 kB] Get: 127 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.1 [285 kB] Get: 128 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-5 [316 kB] Get: 129 http://deb.debian.org/debian bookworm/main amd64 libwebpdemux2 amd64 1.2.4-0.1 [99.2 kB] Get: 130 http://deb.debian.org/debian bookworm/main amd64 libwebpmux3 amd64 1.2.4-0.1 [109 kB] Get: 131 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get: 132 http://deb.debian.org/debian bookworm/main amd64 libxslt1.1 amd64 1.1.35-1 [242 kB] Get: 133 http://deb.debian.org/debian bookworm/main amd64 python-babel-localedata all 2.10.3-1 [5615 kB] Get: 134 http://deb.debian.org/debian bookworm/main amd64 python-biom-format-doc all 2.1.12-3 [64.8 kB] Get: 135 http://deb.debian.org/debian bookworm/main amd64 python-matplotlib-data all 3.6.3-1 [2744 kB] Get: 136 http://deb.debian.org/debian bookworm/main amd64 python-pandas-doc all 1.5.3+dfsg-2 [11.9 MB] Get: 137 http://deb.debian.org/debian bookworm/main amd64 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 138 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get: 139 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6 [615 kB] Get: 140 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB] Get: 141 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B] Get: 142 http://deb.debian.org/debian bookworm/main amd64 python3-appdirs all 1.4.4-3 [13.0 kB] Get: 143 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB] Get: 144 http://deb.debian.org/debian bookworm/main amd64 python3-asttokens all 2.2.1-1 [19.8 kB] Get: 145 http://deb.debian.org/debian bookworm/main amd64 python3-attr all 22.2.0-1 [65.4 kB] Get: 146 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 147 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.7.1-3 [30.1 kB] Get: 148 http://deb.debian.org/debian bookworm/main amd64 python3-babel all 2.10.3-1 [103 kB] Get: 149 http://deb.debian.org/debian bookworm/main amd64 python3-backcall all 0.2.0-4 [12.1 kB] Get: 150 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B] Get: 151 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-3 [9920 B] Get: 152 http://deb.debian.org/debian bookworm/main amd64 python3-brotli amd64 1.0.9-2+b6 [281 kB] Get: 153 http://deb.debian.org/debian bookworm/main amd64 python3-certifi all 2022.9.24-1 [153 kB] Get: 154 http://deb.debian.org/debian bookworm/main amd64 python3-charset-normalizer all 3.0.1-2 [49.3 kB] Get: 155 http://deb.debian.org/debian bookworm/main amd64 python3-idna all 3.3-1 [39.4 kB] Get: 156 http://deb.debian.org/debian bookworm/main amd64 python3-urllib3 all 1.26.12-1 [117 kB] Get: 157 http://deb.debian.org/debian bookworm/main amd64 python3-chardet all 5.1.0+dfsg-2 [110 kB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 python3-requests all 2.28.1+dfsg-1 [67.9 kB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 python3-msgpack amd64 1.0.3-2+b1 [67.3 kB] Get: 160 http://deb.debian.org/debian bookworm/main amd64 python3-cachecontrol all 0.12.12-2 [17.9 kB] Get: 161 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1 [5209 kB] Get: 162 http://deb.debian.org/debian bookworm/main amd64 python3-contourpy amd64 1.0.7-1+b1 [176 kB] Get: 163 http://deb.debian.org/debian bookworm/main amd64 python3-cycler all 0.11.0-1 [8020 B] Get: 164 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.2-2 [78.3 kB] Get: 165 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-3 [14.9 kB] Get: 166 http://deb.debian.org/debian bookworm/main amd64 python3.11-doc all 3.11.2-6 [12.6 MB] Get: 167 http://deb.debian.org/debian bookworm/main amd64 python3-doc all 3.11.2-1 [9208 B] Get: 168 http://deb.debian.org/debian bookworm/main amd64 python3-roman all 3.3-3 [9880 B] Get: 169 http://deb.debian.org/debian bookworm/main amd64 python3-docutils all 0.19+dfsg-6 [382 kB] Get: 170 http://deb.debian.org/debian bookworm/main amd64 python3-executing all 1.2.0-2 [22.6 kB] Get: 171 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get: 172 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get: 173 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB] Get: 174 http://deb.debian.org/debian bookworm/main amd64 python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB] Get: 175 http://deb.debian.org/debian bookworm/main amd64 python3-mpmath all 1.2.1-2 [418 kB] Get: 176 http://deb.debian.org/debian bookworm/main amd64 python3-sympy all 1.11.1-1 [4358 kB] Get: 177 http://deb.debian.org/debian bookworm/main amd64 python3-fs all 2.4.16-2 [95.2 kB] Get: 178 http://deb.debian.org/debian bookworm/main amd64 python3-lxml amd64 4.9.2-1+b1 [1194 kB] Get: 179 http://deb.debian.org/debian bookworm/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b2 [25.0 kB] Get: 180 http://deb.debian.org/debian bookworm/main amd64 unicode-data all 15.0.0-1 [7984 kB] Get: 181 http://deb.debian.org/debian bookworm/main amd64 python3-fonttools amd64 4.38.0-1+b1 [1012 kB] Get: 182 http://deb.debian.org/debian bookworm/main amd64 python3-h5py-serial amd64 3.7.0-8 [804 kB] Get: 183 http://deb.debian.org/debian bookworm/main amd64 python3-h5py all 3.7.0-8 [10.3 kB] Get: 184 http://deb.debian.org/debian bookworm/main amd64 python3-hdmedians amd64 0.14.2-5+b1 [100 kB] Get: 185 http://deb.debian.org/debian bookworm/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 186 http://deb.debian.org/debian bookworm/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 187 http://deb.debian.org/debian bookworm/main amd64 python3-parso all 0.8.3-1 [67.4 kB] Get: 188 http://deb.debian.org/debian bookworm/main amd64 python3-jedi all 0.18.2-1 [689 kB] Get: 189 http://deb.debian.org/debian bookworm/main amd64 python3-traitlets all 5.5.0-1 [92.4 kB] Get: 190 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib-inline all 0.1.6-2 [8652 B] Get: 191 http://deb.debian.org/debian bookworm/main amd64 python3-ptyprocess all 0.7.0-5 [14.7 kB] Get: 192 http://deb.debian.org/debian bookworm/main amd64 python3-pexpect all 4.8.0-4 [52.9 kB] Get: 193 http://deb.debian.org/debian bookworm/main amd64 python3-pickleshare all 0.7.5-5 [7600 B] Get: 194 http://deb.debian.org/debian bookworm/main amd64 python3-wcwidth all 0.2.5+dfsg1-1.1 [21.4 kB] Get: 195 http://deb.debian.org/debian bookworm/main amd64 python3-prompt-toolkit all 3.0.36-2 [276 kB] Get: 196 http://deb.debian.org/debian bookworm/main amd64 python3-pygments all 2.14.0+dfsg-1 [783 kB] Get: 197 http://deb.debian.org/debian bookworm/main amd64 python3-pure-eval all 0.2.2-1 [11.2 kB] Get: 198 http://deb.debian.org/debian bookworm/main amd64 python3-stack-data all 0.6.2-3 [21.8 kB] Get: 199 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB] Get: 200 http://deb.debian.org/debian bookworm/main amd64 python3-ipython all 8.5.0-4 [517 kB] Get: 201 http://deb.debian.org/debian bookworm/main amd64 python3-markupsafe amd64 2.1.2-1+b1 [13.2 kB] Get: 202 http://deb.debian.org/debian bookworm/main amd64 python3-jinja2 all 3.1.2-1 [119 kB] Get: 203 http://deb.debian.org/debian bookworm/main amd64 python3-joblib all 1.2.0-4 [211 kB] Get: 204 http://deb.debian.org/debian bookworm/main amd64 python3-kiwisolver amd64 1.4.4-1+b1 [60.1 kB] Get: 205 http://deb.debian.org/debian bookworm/main amd64 python3-lockfile all 1:0.12.2-2.2 [17.3 kB] Get: 206 http://deb.debian.org/debian bookworm/main amd64 python3-pil amd64 9.4.0-1.1+b1 [472 kB] Get: 207 http://deb.debian.org/debian bookworm/main amd64 python3-tk amd64 3.11.2-2 [98.2 kB] Get: 208 http://deb.debian.org/debian bookworm/main amd64 python3-pil.imagetk amd64 9.4.0-1.1+b1 [74.4 kB] Get: 209 http://deb.debian.org/debian bookworm/main amd64 python3-pyparsing all 3.0.9-1 [138 kB] Get: 210 http://deb.debian.org/debian bookworm/main amd64 python3-packaging all 23.0-1 [32.5 kB] Get: 211 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib amd64 3.6.3-1+b1 [6921 kB] Get: 212 http://deb.debian.org/debian bookworm/main amd64 python3-more-itertools all 8.10.0-2 [53.0 kB] Get: 213 http://deb.debian.org/debian bookworm/main amd64 python3-natsort all 8.0.2-2 [39.0 kB] Get: 214 http://deb.debian.org/debian bookworm/main amd64 python3-pandas-lib amd64 1.5.3+dfsg-2 [3499 kB] Get: 215 http://deb.debian.org/debian bookworm/main amd64 python3-pandas all 1.5.3+dfsg-2 [2885 kB] Get: 216 http://deb.debian.org/debian bookworm/main amd64 python3-pluggy all 1.0.0+repack-1 [19.7 kB] Get: 217 http://deb.debian.org/debian bookworm/main amd64 python3-py all 1.11.0-1 [89.2 kB] Get: 218 http://deb.debian.org/debian bookworm/main amd64 python3-pytest all 7.2.1-2 [236 kB] Get: 219 http://deb.debian.org/debian bookworm/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 220 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn-lib amd64 1.2.1+dfsg-1 [2567 kB] Get: 221 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn all 1.2.1+dfsg-1 [2103 kB] Get: 222 http://deb.debian.org/debian bookworm/main amd64 python3-snowballstemmer all 2.2.0-2 [57.8 kB] Get: 223 http://deb.debian.org/debian bookworm/main amd64 sphinx-common all 5.3.0-4 [653 kB] Get: 224 http://deb.debian.org/debian bookworm/main amd64 python3-sphinx all 5.3.0-4 [549 kB] Get: 225 http://deb.debian.org/debian bookworm/main amd64 python3-sphinx-bootstrap-theme all 0.8.1-1 [422 kB] Fetched 182 MB in 4s (51.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.2-6) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_amd64.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:amd64 (3.11.2-6) ... Setting up libexpat1:amd64 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19912 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_amd64.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../3-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_amd64.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20346 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.2-1+b1_amd64.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../002-libproc2-0_2%3a4.0.2-3_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.2-3_amd64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.0.8-1_amd64.deb ... Unpacking openssl (3.0.8-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../008-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../011-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.22.4-10_amd64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../013-bsdextrautils_2.38.1-5+b1_amd64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../014-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../015-man-db_2.11.2-2_amd64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.19-3_amd64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../021-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../022-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../023-libpng16-16_1.6.39-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.39-2) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../024-libfreetype6_2.12.1+dfsg-5_amd64.deb ... Unpacking libfreetype6:amd64 (2.12.1+dfsg-5) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../025-fonts-dejavu-core_2.37-6_all.deb ... Unpacking fonts-dejavu-core (2.37-6) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../026-fontconfig-config_2.14.1-4_amd64.deb ... Unpacking fontconfig-config (2.14.1-4) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../027-libfontconfig1_2.14.1-4_amd64.deb ... Unpacking libfontconfig1:amd64 (2.14.1-4) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../028-libxau6_1%3a1.0.9-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../029-libbsd0_0.11.7-2_amd64.deb ... Unpacking libbsd0:amd64 (0.11.7-2) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../030-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../031-libxcb1_1.15-1_amd64.deb ... Unpacking libxcb1:amd64 (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../032-libx11-data_2%3a1.8.4-2_all.deb ... Unpacking libx11-data (2:1.8.4-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../033-libx11-6_2%3a1.8.4-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.4-2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../034-libxrender1_1%3a0.9.10-1.1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../035-libxft2_2.3.6-1_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../036-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package x11-common. Preparing to unpack .../037-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../038-libxss1_1%3a1.2.3-1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../039-libtk8.6_8.6.13-2_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.13-2) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../040-tk8.6-blt2.5_2.5.3+dfsg-4.1_amd64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Selecting previously unselected package blt. Preparing to unpack .../041-blt_2.5.3+dfsg-4.1_amd64.deb ... Unpacking blt (2.5.3+dfsg-4.1) ... Selecting previously unselected package cython3. Preparing to unpack .../042-cython3_0.29.32-2+b1_amd64.deb ... Unpacking cython3 (0.29.32-2+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../043-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../044-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. 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Selecting previously unselected package python3-lxml:amd64. Preparing to unpack .../167-python3-lxml_4.9.2-1+b1_amd64.deb ... Unpacking python3-lxml:amd64 (4.9.2-1+b1) ... Selecting previously unselected package python3-lz4. Preparing to unpack .../168-python3-lz4_4.0.2+dfsg-1+b2_amd64.deb ... Unpacking python3-lz4 (4.0.2+dfsg-1+b2) ... Selecting previously unselected package unicode-data. Preparing to unpack .../169-unicode-data_15.0.0-1_all.deb ... Unpacking unicode-data (15.0.0-1) ... Selecting previously unselected package python3-fonttools. Preparing to unpack .../170-python3-fonttools_4.38.0-1+b1_amd64.deb ... Unpacking python3-fonttools (4.38.0-1+b1) ... Selecting previously unselected package python3-h5py-serial. Preparing to unpack .../171-python3-h5py-serial_3.7.0-8_amd64.deb ... Unpacking python3-h5py-serial (3.7.0-8) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../172-python3-h5py_3.7.0-8_all.deb ... Unpacking python3-h5py (3.7.0-8) ... Selecting previously unselected package python3-hdmedians. Preparing to unpack .../173-python3-hdmedians_0.14.2-5+b1_amd64.deb ... Unpacking python3-hdmedians (0.14.2-5+b1) ... Selecting previously unselected package python3-imagesize. Preparing to unpack .../174-python3-imagesize_1.4.1-1_all.deb ... Unpacking python3-imagesize (1.4.1-1) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../175-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-parso. Preparing to unpack .../176-python3-parso_0.8.3-1_all.deb ... Unpacking python3-parso (0.8.3-1) ... Selecting previously unselected package python3-jedi. Preparing to unpack .../177-python3-jedi_0.18.2-1_all.deb ... Unpacking python3-jedi (0.18.2-1) ... Selecting previously unselected package python3-traitlets. Preparing to unpack .../178-python3-traitlets_5.5.0-1_all.deb ... Unpacking python3-traitlets (5.5.0-1) ... Selecting previously unselected package python3-matplotlib-inline. Preparing to unpack .../179-python3-matplotlib-inline_0.1.6-2_all.deb ... Unpacking python3-matplotlib-inline (0.1.6-2) ... Selecting previously unselected package python3-ptyprocess. Preparing to unpack .../180-python3-ptyprocess_0.7.0-5_all.deb ... Unpacking python3-ptyprocess (0.7.0-5) ... Selecting previously unselected package python3-pexpect. Preparing to unpack .../181-python3-pexpect_4.8.0-4_all.deb ... Unpacking python3-pexpect (4.8.0-4) ... Selecting previously unselected package python3-pickleshare. Preparing to unpack .../182-python3-pickleshare_0.7.5-5_all.deb ... Unpacking python3-pickleshare (0.7.5-5) ... Selecting previously unselected package python3-wcwidth. Preparing to unpack .../183-python3-wcwidth_0.2.5+dfsg1-1.1_all.deb ... Unpacking python3-wcwidth (0.2.5+dfsg1-1.1) ... Selecting previously unselected package python3-prompt-toolkit. 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Unpacking python3-pil:amd64 (9.4.0-1.1+b1) ... Selecting previously unselected package python3-tk:amd64. Preparing to unpack .../196-python3-tk_3.11.2-2_amd64.deb ... Unpacking python3-tk:amd64 (3.11.2-2) ... Selecting previously unselected package python3-pil.imagetk:amd64. Preparing to unpack .../197-python3-pil.imagetk_9.4.0-1.1+b1_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (9.4.0-1.1+b1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../198-python3-pyparsing_3.0.9-1_all.deb ... Unpacking python3-pyparsing (3.0.9-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../199-python3-packaging_23.0-1_all.deb ... Unpacking python3-packaging (23.0-1) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../200-python3-matplotlib_3.6.3-1+b1_amd64.deb ... Unpacking python3-matplotlib (3.6.3-1+b1) ... Selecting previously unselected package python3-more-itertools. 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Selecting previously unselected package python3-pytest. Preparing to unpack .../207-python3-pytest_7.2.1-2_all.deb ... Unpacking python3-pytest (7.2.1-2) ... Selecting previously unselected package python3-threadpoolctl. Preparing to unpack .../208-python3-threadpoolctl_3.1.0-1_all.deb ... Unpacking python3-threadpoolctl (3.1.0-1) ... Selecting previously unselected package python3-sklearn-lib:amd64. Preparing to unpack .../209-python3-sklearn-lib_1.2.1+dfsg-1_amd64.deb ... Unpacking python3-sklearn-lib:amd64 (1.2.1+dfsg-1) ... Selecting previously unselected package python3-sklearn. Preparing to unpack .../210-python3-sklearn_1.2.1+dfsg-1_all.deb ... Unpacking python3-sklearn (1.2.1+dfsg-1) ... Selecting previously unselected package python3-snowballstemmer. Preparing to unpack .../211-python3-snowballstemmer_2.2.0-2_all.deb ... Unpacking python3-snowballstemmer (2.2.0-2) ... Selecting previously unselected package sphinx-common. Preparing to unpack .../212-sphinx-common_5.3.0-4_all.deb ... Unpacking sphinx-common (5.3.0-4) ... Selecting previously unselected package python3-sphinx. Preparing to unpack .../213-python3-sphinx_5.3.0-4_all.deb ... Unpacking python3-sphinx (5.3.0-4) ... Selecting previously unselected package python3-sphinx-bootstrap-theme. Preparing to unpack .../214-python3-sphinx-bootstrap-theme_0.8.1-1_all.deb ... Unpacking python3-sphinx-bootstrap-theme (0.8.1-1) ... Setting up media-types (10.0.0) ... Setting up libpipeline1:amd64 (1.5.7-1) ... Setting up libgraphite2-3:amd64 (1.3.14-1) ... Setting up libsimde-dev (0.7.4~rc2-2) ... Setting up liblcms2-2:amd64 (2.14-2) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libpsl5:amd64 (0.21.2-1) ... Setting up libboost1.74-dev:amd64 (1.74.0+ds1-20) ... Setting up fonts-mathjax (2.7.9+dfsg-1) ... Setting up libicu72:amd64 (72.1-3) ... Setting up liblerc4:amd64 (4.0.0+ds-2) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libjs-mathjax (2.7.9+dfsg-1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.74.6-2) ... No schema files found: doing nothing. Setting up fonts-lyx (2.3.7-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libnghttp2-14:amd64 (1.52.0-1) ... Setting up libmagic1:amd64 (1:5.44-3) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up libqhull-r8.0:amd64 (2020.2-5) ... Setting up file (1:5.44-3) ... Setting up libjbig0:amd64 (2.1-6.1) ... Setting up libaec0:amd64 (1.0.6-1+b1) ... Setting up python-babel-localedata (2.10.3-1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up unicode-data (15.0.0-1) ... Setting up libxsimd-dev:amd64 (8.1.0-7) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.5.0-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2) ... Setting up libx11-data (2:1.8.4-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up liblzf1:amd64 (3.6-3) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libimagequant0:amd64 (2.17.0-1) ... Setting up libproc2-0:amd64 (2:4.0.2-3) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... Setting up autopoint (0.21-12) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:amd64 (1.2.4-0.1) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libtiff6:amd64 (4.5.0-5) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libjson-perl (4.10000-1) ... Setting up libopenjp2-7:amd64 (2.5.0-1+b1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up sgml-base (1.31) ... Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up python-matplotlib-data (3.6.3-1) ... Setting up openssl (3.0.8-1) ... Setting up libwebpmux3:amd64 (1.2.4-0.1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libssw0:amd64 (1.1-13) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up libsz2:amd64 (1.0.6-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up libopenblas0-pthread:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libssw-dev:amd64 (1.1-13) ... Setting up libtool (2.4.7-5) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libwebpdemux2:amd64 (1.2.4-0.1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-5) ... Setting up python3.11-doc (3.11.2-6) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up libopenblas0:amd64 (0.3.21+ds-4) ... Setting up groff-base (1.22.4-10) ... Setting up xml-core (0.18+nmu1) ... Setting up libxslt1.1:amd64 (1.1.35-1) ... Setting up libcurl4:amd64 (7.88.1-9) ... Setting up libx11-6:amd64 (2:1.8.4-2) ... Setting up libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up python3-doc (3.11.2-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1) ... Setting up libopenblas-pthread-dev:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up python-pandas-doc (1.5.3+dfsg-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python-biom-format-doc (2.1.12-3) ... Setting up libopenblas-dev:amd64 (0.3.21+ds-4) ... Setting up libraqm0:amd64 (0.7.0-4.1) ... Setting up sphinx-common (5.3.0-4) ... Setting up libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Setting up python3.11 (3.11.2-6) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libpython3.11:amd64 (3.11.2-6) ... Setting up libtk8.6:amd64 (8.6.13-2) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-markupsafe (2.1.2-1+b1) ... Setting up python3-tz (2022.7.1-3) ... Setting up python3-natsort (8.0.2-2) ... Setting up python3-six (1.16.0-4) ... Setting up python3-roman (3.3-3) ... Setting up python3-decorator (5.1.1-3) ... Setting up python3-jinja2 (3.1.2-1) ... Setting up python3-packaging (23.0-1) ... Setting up python3-wcwidth (0.2.5+dfsg1-1.1) ... Setting up python3-pyparsing (3.0.9-1) ... Setting up python3-certifi (2022.9.24-1) ... Setting up python3-sphinx-bootstrap-theme (0.8.1-1) ... Setting up python3-snowballstemmer (2.2.0-2) ... Setting up libpython3.11-dev:amd64 (3.11.2-6) ... Setting up python3-brotli (1.0.9-2+b6) ... Setting up python3-cycler (0.11.0-1) ... Setting up python3-kiwisolver (1.4.4-1+b1) ... Setting up python3-idna (3.3-1) ... Setting up cython3 (0.29.32-2+b1) ... Setting up python3-pickleshare (0.7.5-5) ... Setting up python3-urllib3 (1.26.12-1) ... Setting up python3-pluggy (1.0.0+repack-1) ... Setting up python3-lxml:amd64 (4.9.2-1+b1) ... Setting up python3-traitlets (5.5.0-1) ... Setting up python3-dateutil (2.8.2-2) ... Setting up python3-msgpack (1.0.3-2+b1) ... Setting up python3-mpmath (1.2.1-2) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-appdirs (1.4.4-3) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-ptyprocess (0.7.0-5) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-prompt-toolkit (3.0.36-2) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up python3-more-itertools (8.10.0-2) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.11.1-1) ... Setting up python3-attr (22.2.0-1) ... Setting up python3-lockfile (1:0.12.2-2.2) ... Setting up python3-pure-eval (0.2.2-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Setting up libpython3-dev:amd64 (3.11.2-1+b1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3-py (1.11.0-1) ... Setting up python3-backcall (0.2.0-4) ... Setting up python3-joblib (1.2.0-4) ... Setting up python3-parso (0.8.3-1) ... Setting up python3-babel (2.10.3-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-lz4 (4.0.2+dfsg-1+b2) ... Setting up python3-asttokens (2.2.1-1) ... Setting up python3.11-dev (3.11.2-6) ... Setting up python3-charset-normalizer (3.0.1-2) ... Setting up python3-pytest (7.2.1-2) ... Setting up python3-alabaster (0.7.12-1) ... Setting up blt (2.5.3+dfsg-4.1) ... Setting up python3-ply (3.11-5) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-tk:amd64 (3.11.2-2) ... Setting up python3-matplotlib-inline (0.1.6-2) ... Setting up python3-fs (2.4.16-2) ... Setting up python3-beniget (0.4.1-3) ... Setting up python3-pygments (2.14.0+dfsg-1) ... Setting up python3-chardet (5.1.0+dfsg-2) ... Setting up python3-executing (1.2.0-2) ... Setting up libpython3-all-dev:amd64 (3.11.2-1+b1) ... Setting up python3-pexpect (4.8.0-4) ... Setting up python3-dev (3.11.2-1+b1) ... Setting up python3-requests (2.28.1+dfsg-1) ... Setting up python3-numpy (1:1.24.2-1) ... Setting up python3-hdmedians (0.14.2-5+b1) ... Setting up python3-contourpy (1.0.7-1+b1) ... Setting up python3-cachecontrol (0.12.12-2) ... Setting up python3-stack-data (0.6.2-3) ... Setting up python3-all-dev (3.11.2-1+b1) ... Setting up python3-jedi (0.18.2-1) ... Setting up python3-pandas-lib:amd64 (1.5.3+dfsg-2) ... Setting up python3-sklearn-lib:amd64 (1.2.1+dfsg-1) ... Setting up python3-h5py-serial (3.7.0-8) ... Setting up python3-pandas (1.5.3+dfsg-2) ... Setting up python3-ipython (8.5.0-4) ... Setting up python3-h5py (3.7.0-8) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-scipy (1.10.1-2) ... Setting up python3-sklearn (1.2.1+dfsg-1) ... Setting up python3-fonttools (4.38.0-1+b1) ... Setting up python3-pil.imagetk:amd64 (9.4.0-1.1+b1) ... Setting up python3-ufolib2 (0.14.0+dfsg1-1) ... Setting up python3-pil:amd64 (9.4.0-1.1+b1) ... Setting up python3-matplotlib (3.6.3-1+b1) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.19+dfsg-6) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.19+dfsg-6) ... Setting up python3-sphinx (5.3.0-4) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/python-skbio-0.5.8/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-skbio_0.5.8-4_source.changes dpkg-buildpackage: info: source package python-skbio dpkg-buildpackage: info: source version 0.5.8-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/python-skbio-0.5.8' if [ "`find . -name "*.pyo"`" = "" ] ; then echo no need to clean up ; else dh_auto_clean; fi no need to clean up make[1]: Leaving directory '/build/python-skbio-0.5.8' dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/python-skbio-0.5.8' dh_clean find ./skbio -name '*.so' -delete find ./skbio -name '*.o' -delete rm -rf doc/build build doc/source/generated find doc -name *.doctree -delete rm -rf .pybuild rm -f scikit_bio.egg-info/PKG-INFO scikit_bio.egg-info/SOURCES.txt scikit_bio.egg-info/dependency_links.txt scikit_bio.egg-info/requires.txt scikit_bio.egg-info/top_level.txt rm -f skbio/alignment/_ssw_wrapper.c skbio/diversity/_phylogenetic.c skbio/stats/__subsample.c skbio/metadata/_intersection.c mv simde-sse2.h.orig simde-sse2.h || true mv: cannot stat 'simde-sse2.h.orig': No such file or directory make[1]: Leaving directory '/build/python-skbio-0.5.8' debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/python-skbio-0.5.8' mv simde-sse2.h simde-sse2.h.orig rm -f skbio/alignment/_ssw_wrapper.c skbio/diversity/_phylogenetic.c skbio/stats/__subsample.c skbio/metadata/_intersection.c dh_auto_configure I: pybuild base:240: python3.11 setup.py config /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/alignment/_ssw_wrapper.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/diversity/_phylogenetic.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/metadata/_intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/__subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/distance/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/ordination/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) [1/6] Cythonizing skbio/alignment/_ssw_wrapper.pyx [2/6] Cythonizing skbio/diversity/_phylogenetic.pyx [3/6] Cythonizing skbio/metadata/_intersection.pyx [4/6] Cythonizing skbio/stats/__subsample.pyx [5/6] Cythonizing skbio/stats/distance/_cutils.pyx [6/6] Cythonizing skbio/stats/ordination/_cutils.pyx running config make[1]: Leaving directory '/build/python-skbio-0.5.8' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/python-skbio-0.5.8' dh_auto_build I: pybuild base:240: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/alignment/_ssw_wrapper.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/diversity/_phylogenetic.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/metadata/_intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/__subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/distance/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/ordination/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) [1/6] Cythonizing skbio/alignment/_ssw_wrapper.pyx [2/6] Cythonizing skbio/diversity/_phylogenetic.pyx [3/6] Cythonizing skbio/metadata/_intersection.pyx [4/6] Cythonizing skbio/stats/__subsample.pyx [5/6] Cythonizing skbio/stats/distance/_cutils.pyx [6/6] Cythonizing skbio/stats/ordination/_cutils.pyx running build running build_py creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio copying skbio/workflow.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio copying skbio/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio copying skbio/test.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio copying skbio/_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity copying skbio/diversity/_block.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity copying skbio/diversity/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity copying skbio/diversity/_driver.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity copying skbio/diversity/_util.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_grammared_sequence.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_protein.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/distance.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_rna.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_genetic_code.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_nucleotide_mixin.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_sequence.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_repr.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence copying skbio/sequence/_dna.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io copying skbio/io/registry.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io copying skbio/io/_exception.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io copying skbio/io/_iosources.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io copying skbio/io/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io copying skbio/io/_fileobject.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io copying skbio/io/util.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io copying skbio/io/_warning.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree copying skbio/tree/_exception.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree copying skbio/tree/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree copying skbio/tree/_nj.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree copying skbio/tree/_tree.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree copying skbio/tree/_majority_rule.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats copying skbio/stats/gradient.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats copying skbio/stats/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats copying skbio/stats/_subsample.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats copying skbio/stats/composition.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats copying skbio/stats/_misc.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats copying skbio/stats/power.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata copying skbio/metadata/_interval.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata copying skbio/metadata/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata copying skbio/metadata/_mixin.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata copying skbio/metadata/_testing.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata copying skbio/metadata/_repr.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment copying skbio/alignment/_indexing.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment copying skbio/alignment/_pairwise.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment copying skbio/alignment/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment copying skbio/alignment/_tabular_msa.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment copying skbio/alignment/_repr.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util copying skbio/util/_exception.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util copying skbio/util/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util copying skbio/util/_decorator.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util copying skbio/util/_testing.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util copying skbio/util/_misc.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util copying skbio/util/_warning.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests copying skbio/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests copying skbio/tests/test_workflow.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests copying skbio/tests/test_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha copying skbio/diversity/alpha/_lladser.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha copying skbio/diversity/alpha/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha copying skbio/diversity/alpha/_gini.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha copying skbio/diversity/alpha/_ace.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha copying skbio/diversity/alpha/_chao1.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha copying skbio/diversity/alpha/_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha copying skbio/diversity/alpha/_faith_pd.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta copying skbio/diversity/beta/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta copying skbio/diversity/beta/_unifrac.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests copying skbio/diversity/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests copying skbio/diversity/tests/test_block.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests copying skbio/diversity/tests/test_util.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests copying skbio/diversity/tests/test_driver.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_chao1.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_lladser.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_gini.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_ace.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_faith_pd.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests copying skbio/diversity/beta/tests/test_unifrac.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests copying skbio/diversity/beta/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_sequence.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_genetic_code.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_distance.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_protein.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_rna.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_nucleotide_sequences.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_grammared_sequence.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests copying skbio/sequence/tests/test_dna.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/emptyfile.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/taxdump.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/embl.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/blast7.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/stockholm.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/fastq.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/_blast.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/clustal.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/blast6.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/phylip.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/genbank.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/newick.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/ordination.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/_sequence_feature_vocabulary.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/binary_dm.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/qseq.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/lsmat.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/gff3.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format copying skbio/io/format/fasta.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests copying skbio/io/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests copying skbio/io/tests/test_util.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests copying skbio/io/tests/test_iosources.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests copying skbio/io/tests/test_registry.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_ordination.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_blast6.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_gff3.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_qseq.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_genbank.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_taxdump.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_fastq.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_binary_dm.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_embl.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_newick.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_stockholm.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_fasta.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_clustal.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_blast7.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_emptyfile.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_phylip.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_lsmat.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests copying skbio/io/format/tests/test_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests copying skbio/tree/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests copying skbio/tree/tests/test_majority_rule.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests copying skbio/tree/tests/test_tree.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests copying skbio/tree/tests/test_nj.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination copying skbio/stats/ordination/_redundancy_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination copying skbio/stats/ordination/_principal_coordinate_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination copying skbio/stats/ordination/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination copying skbio/stats/ordination/_utils.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination copying skbio/stats/ordination/_correspondence_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination copying skbio/stats/ordination/_ordination_results.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve copying skbio/stats/evolve/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve copying skbio/stats/evolve/_hommola.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/_permanova.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/_permdisp.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/_anosim.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/_utils.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/_mantel.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance copying skbio/stats/distance/_bioenv.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests copying skbio/stats/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests copying skbio/stats/tests/test_misc.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests copying skbio/stats/tests/test_subsample.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests copying skbio/stats/tests/test_power.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests copying skbio/stats/tests/test_gradient.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests copying skbio/stats/tests/test_composition.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_ordination_results.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_util.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/tests copying skbio/stats/evolve/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/tests copying skbio/stats/evolve/tests/test_hommola.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_bioenv.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests copying skbio/stats/distance/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_permanova.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_mantel.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_permdisp.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_anosim.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_base.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests copying skbio/metadata/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests copying skbio/metadata/tests/test_interval.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests copying skbio/metadata/tests/test_mixin.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests copying skbio/metadata/tests/test_intersection.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_lib copying skbio/alignment/_lib/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_lib creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests copying skbio/alignment/tests/test_tabular_msa.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests copying skbio/alignment/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests copying skbio/alignment/tests/test_pairwise.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests copying skbio/alignment/tests/test_ssw.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests copying skbio/util/tests/__init__.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests copying skbio/util/tests/test_misc.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests copying skbio/util/tests/test_decorator.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests copying skbio/util/tests/test_testing.py -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/big5_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/real_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/example_file.gz -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/real_file_2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/example_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/big5_file.gz -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/big5_file.bz2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data copying skbio/io/tests/data/example_file.bz2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_blank_lines_between_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_multi_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_multi_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_single_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_different_padding -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error5 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_bad_missing_directive -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_double_seq.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error22 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_null.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_no_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_multi_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_dna -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error8 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error24 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_escape.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_single_seq_short -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_multi_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_tab.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/taxdump_nodes.dmp -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_no_data -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_blank_lines -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_minimal -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_tabs.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_multi_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_references -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_max_width_5 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_references -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_max_width_1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_short_qual.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_spaces.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_minimal -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_reference_items -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_filter -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_invalid_column_types -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_two_chunks -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_data_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error9 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error20 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error12 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record_upper -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_max_width_5 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record_lower -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_nonstring_labels -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_footer -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error6 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_legacy_format -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_2_seqs_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_single_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_single_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_space.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record_simple -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_single_record -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_read -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_feature_level_record -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_trees -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_missing_locus_name -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_no_data -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_and_blast7_default -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_no_qual.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error7 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_del.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error10 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_invalid_data_type -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_default_multi_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_default_multi_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error17 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_variable_length_ids -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_missing_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_x -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_ws_lines_between_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/taxdump_names.dmp -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_10_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error16 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_single_seq_long -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_constructed -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_default_single_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error13 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_lane -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_double_qual.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_example2_scores -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/tsv_8_fields -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_single_record -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_y -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_uniprot_record -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_rna -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_gc -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error3 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_gibberish -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_msa -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_single_seq_sanger -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_single_reference -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_single_record_lower -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error15 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_all_data_types -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error11 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_gr -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_multi_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error23 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_multi_record -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error18 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_mixed_nans -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_metadata_only -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_blanks_end_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_single_record_upper -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/empty -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_dna_3_seqs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_data_only -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error4 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_max_width_1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_minimal -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/whitespace_only -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_extensive_mixed -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_diff_ids.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_tile -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_header -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_extensive -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_multi_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_blank_lines -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_vtab.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/tsv_10_fields -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_default_single_line -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error14 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_example3_scores -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error21 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error19 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_long_qual.fastq -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/gr_w_msg_raw -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/vr_raw -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/cr_data_out -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/cr_data_raw -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/vr_real_out -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/vr_out -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/gr_wo_msg_out -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/vr_real_raw -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/gr_wo_msg_raw -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/cr_no_data_out -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/cr_no_data_raw -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data copying skbio/stats/tests/data/gr_w_msg_out -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_Y -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/L&L_CA_data -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/varespec.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_Y -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_X -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_skbio -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_X -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/varechem.csv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data creating /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/df_extra_column.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm_reordered.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm3.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/exp_results.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/df.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm2.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm4.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data running build_ext building 'skbio.metadata._intersection' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC creating build creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/skbio creating build/temp.linux-x86_64-cpython-311/skbio/metadata INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/metadata/_intersection.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/metadata/_intersection.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_intersection.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.__subsample' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC creating build/temp.linux-x86_64-cpython-311/skbio/stats INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/stats/__subsample.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/stats/__subsample.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/__subsample.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__subsample.cpython-311-x86_64-linux-gnu.so building 'skbio.alignment._ssw_wrapper' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC creating build/temp.linux-x86_64-cpython-311/skbio/alignment INFO: compile options: '-Iskbio/alignment -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/alignment/_ssw_wrapper.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/alignment/_ssw_wrapper.c:774: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/alignment/_ssw_wrapper.o -L/usr/lib/x86_64-linux-gnu -lssw -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_ssw_wrapper.cpython-311-x86_64-linux-gnu.so building 'skbio.diversity._phylogenetic' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC creating build/temp.linux-x86_64-cpython-311/skbio/diversity INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/diversity/_phylogenetic.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/diversity/_phylogenetic.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/diversity/_phylogenetic.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_phylogenetic.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.ordination._cutils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC creating build/temp.linux-x86_64-cpython-311/skbio/stats/ordination INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' extra options: '-I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP' INFO: x86_64-linux-gnu-gcc: skbio/stats/ordination/_cutils.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/ordination/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_cutils.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.distance._cutils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC creating build/temp.linux-x86_64-cpython-311/skbio/stats/distance INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' extra options: '-I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP' INFO: x86_64-linux-gnu-gcc: skbio/stats/distance/_cutils.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/distance/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_cutils.cpython-311-x86_64-linux-gnu.so make[1]: Leaving directory '/build/python-skbio-0.5.8' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/python-skbio-0.5.8' dh_auto_build I: pybuild base:240: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/alignment/_ssw_wrapper.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/diversity/_phylogenetic.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/metadata/_intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/__subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/distance/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/ordination/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) [1/6] Cythonizing skbio/alignment/_ssw_wrapper.pyx [2/6] Cythonizing skbio/diversity/_phylogenetic.pyx [3/6] Cythonizing skbio/metadata/_intersection.pyx [4/6] Cythonizing skbio/stats/__subsample.pyx [5/6] Cythonizing skbio/stats/distance/_cutils.pyx [6/6] Cythonizing skbio/stats/ordination/_cutils.pyx running build running build_py running build_ext building 'skbio.metadata._intersection' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/metadata/_intersection.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/metadata/_intersection.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_intersection.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.__subsample' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/stats/__subsample.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/stats/__subsample.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/__subsample.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__subsample.cpython-311-x86_64-linux-gnu.so building 'skbio.alignment._ssw_wrapper' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-Iskbio/alignment -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/alignment/_ssw_wrapper.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/alignment/_ssw_wrapper.c:774: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/alignment/_ssw_wrapper.o -L/usr/lib/x86_64-linux-gnu -lssw -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_ssw_wrapper.cpython-311-x86_64-linux-gnu.so building 'skbio.diversity._phylogenetic' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/diversity/_phylogenetic.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/diversity/_phylogenetic.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/diversity/_phylogenetic.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_phylogenetic.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.ordination._cutils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' extra options: '-I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP' INFO: x86_64-linux-gnu-gcc: skbio/stats/ordination/_cutils.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/ordination/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_cutils.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.distance._cutils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' extra options: '-I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP' INFO: x86_64-linux-gnu-gcc: skbio/stats/distance/_cutils.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/distance/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_cutils.cpython-311-x86_64-linux-gnu.so PYTHONPATH=/build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build \ http_proxy='127.0.0.1:9' \ python3 `which sphinx-build` -b html -d doc/build/doctrees doc/source doc/build/html Running Sphinx v5.3.0 Matplotlib created a temporary config/cache directory at /tmp/matplotlib-cq6za5uc because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. making output directory... done [autosummary] generating autosummary for: alignment.rst, diversity.rst, index.rst, io.rst, metadata.rst, sequence.rst, stats.rst, tree.rst, util.rst, workflow.rst [autosummary] generating autosummary for: /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.StripedSmithWaterman.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.TabularMSA.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.global_pairwise_align.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.global_pairwise_align_nucleotide.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.global_pairwise_align_protein.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.local_pairwise_align.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.local_pairwise_align_nucleotide.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.local_pairwise_align_protein.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.local_pairwise_align_ssw.rst, ..., /build/python-skbio-0.5.8/doc/source/generated/skbio.util.assert_data_frame_almost_equal.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.util.assert_ordination_results_equal.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.util.cardinal_to_ordinal.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.util.classproperty.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.util.find_duplicates.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.util.get_data_path.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.util.safe_md5.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.Workflow.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.method.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.rst [autosummary] generating autosummary for: /build/python-skbio-0.5.8/doc/source/generated/generated/skbio.io.util.open.rst, /build/python-skbio-0.5.8/doc/source/generated/generated/skbio.io.util.open_file.rst, /build/python-skbio-0.5.8/doc/source/generated/generated/skbio.io.util.open_files.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.__eq__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.__ge__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.__getitem__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.__getstate__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.__gt__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.__hash__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.alignment.AlignmentStructure.__le__.rst, ..., /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__call__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__eq__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__ge__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__getstate__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__gt__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__hash__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__le__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__lt__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__ne__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.workflow.requires.__str__.rst [autosummary] generating autosummary for: /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__eq__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__ge__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__getstate__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__gt__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__hash__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__le__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__lt__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__ne__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.__str__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.io.registry.Format.reader.rst, ..., /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.__getstate__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.__gt__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.__hash__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.__le__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.__lt__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.__ne__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.__str__.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.plot.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.read.rst, /build/python-skbio-0.5.8/doc/source/generated/skbio.stats.ordination.OrdinationResults.write.rst loading intersphinx inventory from /usr/share/doc/python3.11/html/objects.inv... loading intersphinx inventory from http://docs.scipy.org/doc/numpy/objects.inv... loading intersphinx inventory from /usr/share/doc/python-scipy-doc/html/objects.inv... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory '/usr/share/doc/python-scipy-doc/html/objects.inv' not fetchable due to : [Errno 2] No such file or directory: '/usr/share/doc/python-scipy-doc/html/objects.inv' loading intersphinx inventory from http://matplotlib.org/objects.inv... loading intersphinx inventory from /usr/share/doc/python-pandas-doc/html/objects.inv... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'http://docs.scipy.org/doc/numpy/objects.inv' not fetchable due to : HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://docs.scipy.org/doc/numpy/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) loading intersphinx inventory from /usr/share/doc/python-biom-format-doc/html/objects.inv... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'http://matplotlib.org/objects.inv' not fetchable due to : HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://matplotlib.org/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) building [mo]: targets for 0 po files that are out of date building [html]: targets for 13 source files that are out of date updating environment: [new config] 839 added, 0 changed, 0 removed reading sources... [ 0%] alignment reading sources... [ 0%] development/coding_guidelines reading sources... [ 0%] development/new_module reading sources... [ 0%] diversity /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:143: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -0.011492611219229749 and the largest is 16.021722090908217. warn( /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_ordination_results.py:263: UserWarning: No data for colormapping provided via 'c'. Parameters 'cmap' will be ignored plot = scatter_fn(c=point_colors, cmap=cmap) /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_ordination_results.py:285: UserWarning: Tight layout not applied. The left and right margins cannot be made large enough to accommodate all axes decorations. fig.tight_layout() reading sources... [ 0%] generated/generated/skbio.io.util.open reading sources... [ 0%] generated/generated/skbio.io.util.open_file reading sources... [ 0%] generated/generated/skbio.io.util.open_files reading sources... [ 0%] generated/skbio.alignment.AlignmentStructure reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__eq__ reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__ge__ reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__getitem__ reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__getstate__ reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__gt__ reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__hash__ reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__le__ reading sources... [ 1%] generated/skbio.alignment.AlignmentStructure.__lt__ reading sources... [ 2%] generated/skbio.alignment.AlignmentStructure.__ne__ reading sources... [ 2%] generated/skbio.alignment.AlignmentStructure.__setstate__ reading sources... [ 2%] generated/skbio.alignment.AlignmentStructure.__str__ reading sources... [ 2%] generated/skbio.alignment.AlignmentStructure.is_zero_based reading sources... [ 2%] generated/skbio.alignment.AlignmentStructure.set_zero_based reading sources... [ 2%] generated/skbio.alignment.StripedSmithWaterman reading sources... [ 2%] generated/skbio.alignment.StripedSmithWaterman.__call__ reading sources... [ 2%] generated/skbio.alignment.StripedSmithWaterman.__eq__ reading sources... [ 2%] generated/skbio.alignment.StripedSmithWaterman.__ge__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__getstate__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__gt__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__hash__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__le__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__lt__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__ne__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__setstate__ reading sources... [ 3%] generated/skbio.alignment.StripedSmithWaterman.__str__ reading sources... [ 4%] generated/skbio.alignment.TabularMSA reading sources... [ 4%] generated/skbio.alignment.TabularMSA.__bool__ reading sources... [ 4%] generated/skbio.alignment.TabularMSA.__contains__ reading sources... [ 4%] generated/skbio.alignment.TabularMSA.__copy__ reading sources... [ 4%] generated/skbio.alignment.TabularMSA.__deepcopy__ reading sources... [ 4%] generated/skbio.alignment.TabularMSA.__eq__ reading sources... [ 4%] generated/skbio.alignment.TabularMSA.__ge__ reading sources... [ 4%] generated/skbio.alignment.TabularMSA.__getitem__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__getstate__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__gt__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__iter__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__le__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__len__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__lt__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__ne__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__reversed__ reading sources... [ 5%] generated/skbio.alignment.TabularMSA.__str__ reading sources... [ 6%] generated/skbio.alignment.TabularMSA.append reading sources... [ 6%] generated/skbio.alignment.TabularMSA.consensus reading sources... [ 6%] generated/skbio.alignment.TabularMSA.conservation reading sources... [ 6%] generated/skbio.alignment.TabularMSA.extend reading sources... [ 6%] generated/skbio.alignment.TabularMSA.from_dict reading sources... [ 6%] generated/skbio.alignment.TabularMSA.gap_frequencies reading sources... [ 6%] generated/skbio.alignment.TabularMSA.has_metadata reading sources... [ 6%] generated/skbio.alignment.TabularMSA.has_positional_metadata reading sources... [ 7%] generated/skbio.alignment.TabularMSA.iter_positions reading sources... [ 7%] generated/skbio.alignment.TabularMSA.join reading sources... [ 7%] generated/skbio.alignment.TabularMSA.read reading sources... [ 7%] generated/skbio.alignment.TabularMSA.reassign_index reading sources... [ 7%] generated/skbio.alignment.TabularMSA.sort reading sources... [ 7%] generated/skbio.alignment.TabularMSA.to_dict reading sources... [ 7%] generated/skbio.alignment.TabularMSA.write reading sources... [ 7%] generated/skbio.alignment.global_pairwise_align reading sources... [ 7%] generated/skbio.alignment.global_pairwise_align_nucleotide reading sources... [ 8%] generated/skbio.alignment.global_pairwise_align_protein reading sources... [ 8%] generated/skbio.alignment.local_pairwise_align reading sources... [ 8%] generated/skbio.alignment.local_pairwise_align_nucleotide reading sources... [ 8%] generated/skbio.alignment.local_pairwise_align_protein reading sources... [ 8%] generated/skbio.alignment.local_pairwise_align_ssw reading sources... [ 8%] generated/skbio.alignment.make_identity_substitution_matrix reading sources... [ 8%] generated/skbio.diversity.alpha reading sources... [ 8%] generated/skbio.diversity.alpha.ace reading sources... [ 9%] generated/skbio.diversity.alpha.berger_parker_d reading sources... [ 9%] generated/skbio.diversity.alpha.brillouin_d reading sources... [ 9%] generated/skbio.diversity.alpha.chao1 reading sources... [ 9%] generated/skbio.diversity.alpha.chao1_ci reading sources... [ 9%] generated/skbio.diversity.alpha.dominance reading sources... [ 9%] generated/skbio.diversity.alpha.doubles reading sources... [ 9%] generated/skbio.diversity.alpha.enspie reading sources... [ 9%] generated/skbio.diversity.alpha.esty_ci reading sources... [ 10%] generated/skbio.diversity.alpha.faith_pd reading sources... [ 10%] generated/skbio.diversity.alpha.fisher_alpha reading sources... [ 10%] generated/skbio.diversity.alpha.gini_index reading sources... [ 10%] generated/skbio.diversity.alpha.goods_coverage reading sources... [ 10%] generated/skbio.diversity.alpha.heip_e reading sources... [ 10%] generated/skbio.diversity.alpha.kempton_taylor_q reading sources... [ 10%] generated/skbio.diversity.alpha.lladser_ci reading sources... [ 10%] generated/skbio.diversity.alpha.lladser_pe reading sources... [ 10%] generated/skbio.diversity.alpha.margalef reading sources... [ 11%] generated/skbio.diversity.alpha.mcintosh_d reading sources... [ 11%] generated/skbio.diversity.alpha.mcintosh_e reading sources... [ 11%] generated/skbio.diversity.alpha.menhinick reading sources... [ 11%] generated/skbio.diversity.alpha.michaelis_menten_fit reading sources... [ 11%] generated/skbio.diversity.alpha.observed_otus reading sources... [ 11%] generated/skbio.diversity.alpha.osd reading sources... [ 11%] generated/skbio.diversity.alpha.pielou_e reading sources... [ 11%] generated/skbio.diversity.alpha.robbins reading sources... [ 12%] generated/skbio.diversity.alpha.shannon reading sources... [ 12%] generated/skbio.diversity.alpha.simpson reading sources... [ 12%] generated/skbio.diversity.alpha.simpson_e reading sources... [ 12%] generated/skbio.diversity.alpha.singles reading sources... [ 12%] generated/skbio.diversity.alpha.strong reading sources... [ 12%] generated/skbio.diversity.alpha_diversity reading sources... [ 12%] generated/skbio.diversity.beta reading sources... [ 12%] generated/skbio.diversity.beta.unweighted_unifrac reading sources... [ 12%] generated/skbio.diversity.beta.weighted_unifrac reading sources... [ 13%] generated/skbio.diversity.beta_diversity reading sources... [ 13%] generated/skbio.diversity.block_beta_diversity reading sources... [ 13%] generated/skbio.diversity.get_alpha_diversity_metrics reading sources... [ 13%] generated/skbio.diversity.get_beta_diversity_metrics reading sources... [ 13%] generated/skbio.diversity.partial_beta_diversity reading sources... [ 13%] generated/skbio.io.ArgumentOverrideWarning reading sources... [ 13%] generated/skbio.io.BLAST7FormatError reading sources... [ 13%] generated/skbio.io.ClustalFormatError reading sources... [ 14%] generated/skbio.io.EMBLFormatError reading sources... [ 14%] generated/skbio.io.FASTAFormatError reading sources... [ 14%] generated/skbio.io.FASTQFormatError reading sources... [ 14%] generated/skbio.io.FileFormatError reading sources... [ 14%] generated/skbio.io.FormatIdentificationWarning reading sources... [ 14%] generated/skbio.io.GFF3FormatError reading sources... [ 14%] generated/skbio.io.GenBankFormatError reading sources... [ 14%] generated/skbio.io.IOSourceError reading sources... [ 15%] generated/skbio.io.LSMatFormatError reading sources... [ 15%] generated/skbio.io.NewickFormatError reading sources... [ 15%] generated/skbio.io.OrdinationFormatError reading sources... [ 15%] generated/skbio.io.PhylipFormatError reading sources... [ 15%] generated/skbio.io.QSeqFormatError reading sources... [ 15%] generated/skbio.io.QUALFormatError reading sources... [ 15%] generated/skbio.io.StockholmFormatError reading sources... [ 15%] generated/skbio.io.UnrecognizedFormatError reading sources... [ 15%] generated/skbio.io.format.binary_dm reading sources... [ 16%] generated/skbio.io.format.blast6 reading sources... [ 16%] generated/skbio.io.format.blast7 reading sources... [ 16%] generated/skbio.io.format.clustal reading sources... [ 16%] generated/skbio.io.format.embl reading sources... [ 16%] generated/skbio.io.format.fasta reading sources... [ 16%] generated/skbio.io.format.fastq reading sources... [ 16%] generated/skbio.io.format.genbank reading sources... [ 16%] generated/skbio.io.format.gff3 reading sources... [ 17%] generated/skbio.io.format.lsmat reading sources... [ 17%] generated/skbio.io.format.newick reading sources... [ 17%] generated/skbio.io.format.ordination reading sources... [ 17%] generated/skbio.io.format.phylip reading sources... [ 17%] generated/skbio.io.format.qseq reading sources... [ 17%] generated/skbio.io.format.stockholm reading sources... [ 17%] generated/skbio.io.format.taxdump reading sources... [ 17%] generated/skbio.io.registry reading sources... [ 17%] generated/skbio.io.registry.DuplicateRegistrationError reading sources... [ 18%] generated/skbio.io.registry.Format reading sources... [ 18%] generated/skbio.io.registry.Format.__eq__ reading sources... [ 18%] generated/skbio.io.registry.Format.__ge__ reading sources... [ 18%] generated/skbio.io.registry.Format.__getstate__ reading sources... [ 18%] generated/skbio.io.registry.Format.__gt__ reading sources... [ 18%] generated/skbio.io.registry.Format.__hash__ reading sources... [ 18%] generated/skbio.io.registry.Format.__le__ reading sources... [ 18%] generated/skbio.io.registry.Format.__lt__ reading sources... [ 19%] generated/skbio.io.registry.Format.__ne__ reading sources... [ 19%] generated/skbio.io.registry.Format.__str__ reading sources... [ 19%] generated/skbio.io.registry.Format.reader reading sources... [ 19%] generated/skbio.io.registry.Format.sniffer reading sources... [ 19%] generated/skbio.io.registry.Format.writer reading sources... [ 19%] generated/skbio.io.registry.IORegistry reading sources... [ 19%] generated/skbio.io.registry.IORegistry.__eq__ reading sources... [ 19%] generated/skbio.io.registry.IORegistry.__ge__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.__getstate__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.__gt__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.__hash__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.__le__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.__lt__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.__ne__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.__str__ reading sources... [ 20%] generated/skbio.io.registry.IORegistry.add_format reading sources... [ 20%] generated/skbio.io.registry.IORegistry.create_format reading sources... [ 21%] generated/skbio.io.registry.IORegistry.get_reader reading sources... [ 21%] generated/skbio.io.registry.IORegistry.get_sniffer reading sources... [ 21%] generated/skbio.io.registry.IORegistry.get_writer reading sources... [ 21%] generated/skbio.io.registry.IORegistry.list_read_formats reading sources... [ 21%] generated/skbio.io.registry.IORegistry.list_write_formats reading sources... [ 21%] generated/skbio.io.registry.IORegistry.monkey_patch reading sources... [ 21%] generated/skbio.io.registry.IORegistry.read reading sources... [ 21%] generated/skbio.io.registry.IORegistry.sniff reading sources... [ 22%] generated/skbio.io.registry.IORegistry.write reading sources... [ 22%] generated/skbio.io.registry.InvalidRegistrationError reading sources... [ 22%] generated/skbio.io.registry.create_format reading sources... [ 22%] generated/skbio.io.registry.read reading sources... [ 22%] generated/skbio.io.registry.sniff reading sources... [ 22%] generated/skbio.io.registry.write reading sources... [ 22%] generated/skbio.io.util reading sources... [ 22%] generated/skbio.metadata.Interval reading sources... [ 23%] generated/skbio.metadata.Interval.__eq__ reading sources... [ 23%] generated/skbio.metadata.Interval.__ge__ reading sources... [ 23%] generated/skbio.metadata.Interval.__getstate__ reading sources... [ 23%] generated/skbio.metadata.Interval.__gt__ reading sources... [ 23%] generated/skbio.metadata.Interval.__le__ reading sources... [ 23%] generated/skbio.metadata.Interval.__lt__ reading sources... [ 23%] generated/skbio.metadata.Interval.__ne__ reading sources... [ 23%] generated/skbio.metadata.Interval.__str__ reading sources... [ 23%] generated/skbio.metadata.Interval.drop reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata.__copy__ reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata.__deepcopy__ reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata.__eq__ reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata.__ge__ reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata.__getstate__ reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata.__gt__ reading sources... [ 24%] generated/skbio.metadata.IntervalMetadata.__le__ reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.__lt__ reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.__ne__ reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.__str__ reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.add reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.concat reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.drop reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.merge reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.query reading sources... [ 25%] generated/skbio.metadata.IntervalMetadata.read reading sources... [ 26%] generated/skbio.metadata.IntervalMetadata.sort reading sources... [ 26%] generated/skbio.metadata.IntervalMetadata.write reading sources... [ 26%] generated/skbio.sequence.DNA reading sources... [ 26%] generated/skbio.sequence.DNA.__bool__ reading sources... [ 26%] generated/skbio.sequence.DNA.__contains__ reading sources... [ 26%] generated/skbio.sequence.DNA.__copy__ reading sources... [ 26%] generated/skbio.sequence.DNA.__deepcopy__ reading sources... [ 26%] generated/skbio.sequence.DNA.__eq__ reading sources... [ 27%] generated/skbio.sequence.DNA.__ge__ reading sources... [ 27%] generated/skbio.sequence.DNA.__getitem__ reading sources... [ 27%] generated/skbio.sequence.DNA.__getstate__ reading sources... [ 27%] generated/skbio.sequence.DNA.__gt__ reading sources... [ 27%] generated/skbio.sequence.DNA.__iter__ reading sources... [ 27%] generated/skbio.sequence.DNA.__le__ reading sources... [ 27%] generated/skbio.sequence.DNA.__len__ reading sources... [ 27%] generated/skbio.sequence.DNA.__lt__ reading sources... [ 28%] generated/skbio.sequence.DNA.__ne__ reading sources... [ 28%] generated/skbio.sequence.DNA.__reversed__ reading sources... [ 28%] generated/skbio.sequence.DNA.__str__ reading sources... [ 28%] generated/skbio.sequence.DNA.complement reading sources... [ 28%] generated/skbio.sequence.DNA.concat reading sources... [ 28%] generated/skbio.sequence.DNA.count reading sources... [ 28%] generated/skbio.sequence.DNA.definites reading sources... [ 28%] generated/skbio.sequence.DNA.degap reading sources... [ 28%] generated/skbio.sequence.DNA.degenerates reading sources... [ 29%] generated/skbio.sequence.DNA.distance reading sources... [ 29%] generated/skbio.sequence.DNA.expand_degenerates reading sources... [ 29%] generated/skbio.sequence.DNA.find_motifs reading sources... [ 29%] generated/skbio.sequence.DNA.find_with_regex reading sources... [ 29%] generated/skbio.sequence.DNA.frequencies reading sources... [ 29%] generated/skbio.sequence.DNA.gaps reading sources... [ 29%] generated/skbio.sequence.DNA.gc_content reading sources... [ 29%] generated/skbio.sequence.DNA.gc_frequency reading sources... [ 30%] generated/skbio.sequence.DNA.has_definites reading sources... [ 30%] generated/skbio.sequence.DNA.has_degenerates reading sources... [ 30%] generated/skbio.sequence.DNA.has_gaps reading sources... [ 30%] generated/skbio.sequence.DNA.has_interval_metadata reading sources... 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Parameters 'cmap' will be ignored plot = scatter_fn(c=point_colors, cmap=cmap) /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_ordination_results.py:285: UserWarning: Tight layout not applied. The left and right margins cannot be made large enough to accommodate all axes decorations. fig.tight_layout() reading sources... [ 79%] generated/skbio.stats.ordination.OrdinationResults.read reading sources... [ 79%] generated/skbio.stats.ordination.OrdinationResults.write reading sources... [ 79%] generated/skbio.stats.ordination.ca reading sources... [ 79%] generated/skbio.stats.ordination.cca reading sources... [ 79%] generated/skbio.stats.ordination.corr reading sources... [ 80%] generated/skbio.stats.ordination.e_matrix reading sources... [ 80%] generated/skbio.stats.ordination.f_matrix reading sources... [ 80%] generated/skbio.stats.ordination.mean_and_std reading sources... [ 80%] generated/skbio.stats.ordination.pcoa reading sources... 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The HTML pages are in doc/build/html. make[1]: Leaving directory '/build/python-skbio-0.5.8' debian/rules override_dh_auto_test-indep make[1]: Entering directory '/build/python-skbio-0.5.8' echo No testing for the -doc package No testing for the -doc package make[1]: Leaving directory '/build/python-skbio-0.5.8' dh_auto_test -O--buildsystem=pybuild -Npython-skbio-doc I: pybuild base:240: cd /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build; python3.11 -m pytest ============================= test session starts ============================== platform linux -- Python 3.11.2, pytest-7.2.1, pluggy-1.0.0+repack rootdir: /build/python-skbio-0.5.8, configfile: pyproject.toml collected 2382 items skbio/alignment/tests/test_pairwise.py ......................... [ 1%] skbio/alignment/tests/test_ssw.py ........................... [ 2%] skbio/alignment/tests/test_tabular_msa.py .............................. [ 3%] ........................................................................ 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[ 34%] skbio/io/format/tests/test_sequence_feature_vocabulary.py .... [ 34%] skbio/io/format/tests/test_stockholm.py ................................ [ 35%] ........................................... [ 37%] skbio/io/format/tests/test_taxdump.py ...... [ 37%] skbio/io/tests/test_iosources.py .......... [ 38%] skbio/io/tests/test_registry.py ........................................ [ 39%] ...................................................... [ 41%] skbio/io/tests/test_util.py .........................................sss [ 43%] sssssssssssssssssssssssssss............................................. [ 46%] ........................................................................ [ 49%] ................................ [ 51%] skbio/metadata/tests/test_intersection.py ............... [ 51%] skbio/metadata/tests/test_interval.py .................................. [ 53%] ..................................... [ 54%] skbio/metadata/tests/test_mixin.py ..................................... [ 56%] ............................................................. [ 58%] skbio/sequence/tests/test_distance.py .......................... [ 60%] skbio/sequence/tests/test_dna.py .... [ 60%] skbio/sequence/tests/test_genetic_code.py .......................... [ 61%] skbio/sequence/tests/test_grammared_sequence.py ........................ [ 62%] ................... [ 63%] skbio/sequence/tests/test_nucleotide_sequences.py ...................... [ 64%] ....... [ 64%] skbio/sequence/tests/test_protein.py .......... [ 64%] skbio/sequence/tests/test_rna.py .... [ 64%] skbio/sequence/tests/test_sequence.py .................................. [ 66%] ........................................................................ [ 69%] ........................................................................ [ 72%] ........................................................................ [ 75%] ....... [ 75%] skbio/stats/distance/tests/test_anosim.py .... [ 75%] skbio/stats/distance/tests/test_base.py ................................ [ 77%] ................................................................... [ 80%] skbio/stats/distance/tests/test_bioenv.py ................. [ 80%] skbio/stats/distance/tests/test_mantel.py .............................. [ 81%] .............. [ 82%] skbio/stats/distance/tests/test_permanova.py .... [ 82%] skbio/stats/distance/tests/test_permdisp.py ............. [ 83%] skbio/stats/evolve/tests/test_hommola.py ............ [ 83%] skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py . [ 83%] ..... [ 84%] skbio/stats/ordination/tests/test_correspondence_analysis.py ........ [ 84%] skbio/stats/ordination/tests/test_ordination_results.py ................ [ 85%] [ 85%] skbio/stats/ordination/tests/test_principal_coordinate_analysis.py ..... [ 85%] ....... [ 85%] skbio/stats/ordination/tests/test_redundancy_analysis.py .... [ 85%] skbio/stats/ordination/tests/test_util.py .......... [ 86%] skbio/stats/tests/test_composition.py .................................. [ 87%] ........................ [ 88%] skbio/stats/tests/test_gradient.py .......................... [ 89%] skbio/stats/tests/test_misc.py ... [ 89%] skbio/stats/tests/test_power.py ........................................ [ 91%] ... [ 91%] skbio/stats/tests/test_subsample.py ............ [ 92%] skbio/tests/test_base.py ..... [ 92%] skbio/tests/test_workflow.py ................. [ 93%] skbio/tree/tests/test_majority_rule.py ...... [ 93%] skbio/tree/tests/test_nj.py ........... [ 93%] skbio/tree/tests/test_tree.py .......................................... [ 95%] .................................................. [ 97%] skbio/util/tests/test_decorator.py ....................... [ 98%] skbio/util/tests/test_misc.py ................... [ 99%] skbio/util/tests/test_testing.py ............... [100%] =============================== warnings summary =============================== .pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py::TestTabularMSAPositionalMetadata::test_constructor_with_positional_metadata_int64_index .pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_mixin.py::TestPositionalMetadataMixin::test_constructor_with_positional_metadata_int64_index .pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_sequence.py::TestSequencePositionalMetadata::test_constructor_with_positional_metadata_int64_index /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_testing.py:394: FutureWarning: pandas.Int64Index is deprecated and will be removed from pandas in a future version. Use pandas.Index with the appropriate dtype instead. self.assertIsInstance(df.index, pd.Int64Index) .pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py::TestTabularMSAPositionalMetadata::test_positional_metadata_setter_int64_index .pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_mixin.py::TestPositionalMetadataMixin::test_positional_metadata_setter_int64_index .pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_sequence.py::TestSequencePositionalMetadata::test_positional_metadata_setter_int64_index /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_testing.py:780: FutureWarning: pandas.Int64Index is deprecated and will be removed from pandas in a future version. Use pandas.Index with the appropriate dtype instead. self.assertIsInstance(df.index, pd.Int64Index) .pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py::TestTabularMSA::test_constructor_non_unique_labels /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py:142: FutureWarning: pandas.Int64Index is deprecated and will be removed from pandas in a future version. Use pandas.Index with the appropriate dtype instead. assert_index_equal(msa.index, pd.Int64Index([1, 1])) .pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py::TestTabularMSA::test_eq_default_index_and_equivalent_provided_index /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py:552: FutureWarning: pandas.Int64Index is deprecated and will be removed from pandas in a future version. Use pandas.Index with the appropriate dtype instead. assert_index_equal(msa2.index, pd.Int64Index([0, 1, 2])) .pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py: 29 warnings /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_tabular_msa.py:1986: FutureWarning: The series.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead. self._seqs = self._seqs.append(pd.Series(sequences, index=index, .pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py::TestGapFrequencies::test_no_positions_relative /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_tabular_msa.py:1653: RuntimeWarning: invalid value encountered in divide gap_freqs /= length .pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_base.py::BaseTests::test_pielou_e /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_base.py:793: RuntimeWarning: invalid value encountered in scalar divide return shannon(counts, base=np.e) / np.log(observed_otus(counts)) .pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_base.py::BaseTests::test_pielou_e /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_base.py:869: RuntimeWarning: invalid value encountered in divide freqs = counts / counts.sum() .pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_base.py::BaseTests::test_pielou_e /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_base.py:793: RuntimeWarning: divide by zero encountered in log return shannon(counts, base=np.e) / np.log(observed_otus(counts)) .pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/test_util.py::ValidationTests::test_validate_counts_vector_invalid_input /usr/lib/python3/dist-packages/numpy/lib/type_check.py:300: FutureWarning: elementwise comparison failed; returning scalar instead, but in the future will perform elementwise comparison return imag(x) == 0 .pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_sequence.py::TestSequence::test_frequencies_empty_sequence /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_sequence.py:1820: RuntimeWarning: invalid value encountered in divide obs_counts = obs_counts / len(self) .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_mantel.py::MantelTests::test_no_variation_pearson /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_mantel.py:354: ConstantInputWarning: All values in data are exactly equal; results may not be reliable. warnings.warn(ConstantInputWarning()) .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_mantel.py::MantelTests::test_no_variation_spearman /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_mantel.py:473: ConstantInputWarning: All values in data are exactly equal; results may not be reliable. warnings.warn(ConstantInputWarning()) .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_eq_groups .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_no_permuations /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:143: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -13.54184654426961 and the largest is 16.587201374785895. warn( .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_mixedgroups .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_uneq_groups /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:143: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -15.629533932395216 and the largest is 20.90315427793891. warn( .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_null /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:188: RuntimeWarning: invalid value encountered in divide proportion_explained = eigvals / sum_eigenvalues .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_null .pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_composition.py::AncomTests::test_ancom_no_signal /usr/lib/python3/dist-packages/scipy/stats/_stats_py.py:3895: ConstantInputWarning: Each of the input arrays is constant;the F statistic is not defined or infinite warnings.warn(stats.ConstantInputWarning(msg)) .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_confirm_betadispr_results .pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py::testPERMDISP::test_confirm_betadispr_results /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py:143: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -0.007758325147780595 and the largest is 2.707792948946925. warn( .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_plot_no_metadata .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_plot_with_categorical_metadata_and_plot_options .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_plot_with_numeric_metadata_and_plot_options .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_png .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_repr_png .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_repr_svg .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_svg /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_ordination_results.py:285: UserWarning: Tight layout not applied. The left and right margins cannot be made large enough to accommodate all axes decorations. fig.tight_layout() .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py::TestOrdinationResults::test_plot_with_categorical_metadata_and_plot_options /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_ordination_results.py:263: UserWarning: No data for colormapping provided via 'c'. Parameters 'cmap' will be ignored plot = scatter_fn(c=point_colors, cmap=cmap) .pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_redundancy_analysis.py::TestRDAErrors::test_shape /usr/lib/python3.11/unittest/case.py:678: DeprecationWarning: It is deprecated to return a value that is not None from a test case (>) return self.run(*args, **kwds) .pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_composition.py::AncomTests::test_ancom_alternative_test /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/composition.py:1216: RuntimeWarning: Precision loss occurred in moment calculation due to catastrophic cancellation. This occurs when the data are nearly identical. Results may be unreliable. return significance_test(*[x[cats == k] for k in cs]) .pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_gradient.py::GradientANOVATests::test_normalize_samples .pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_gradient.py::GradientANOVATests::test_normalize_samples /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/gradient.py:509: FutureWarning: Passing a set as an indexer is deprecated and will raise in a future version. Use a list instead. self._metadata_map = self._metadata_map.loc[sample_ids] .pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_gradient.py::GradientANOVATests::test_normalize_samples .pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_gradient.py::GradientANOVATests::test_normalize_samples /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/gradient.py:506: FutureWarning: Passing a set as an indexer is deprecated and will raise in a future version. Use a list instead. self._coords = self._coords.loc[sample_ids] -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========== 2352 passed, 30 skipped, 68 warnings in 124.77s (0:02:04) =========== create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/python-skbio-0.5.8/debian/python3-skbio /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/alignment/_ssw_wrapper.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/diversity/_phylogenetic.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/metadata/_intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/__subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/distance/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-skbio-0.5.8/skbio/stats/ordination/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) [1/6] Cythonizing skbio/alignment/_ssw_wrapper.pyx [2/6] Cythonizing skbio/diversity/_phylogenetic.pyx [3/6] Cythonizing skbio/metadata/_intersection.pyx [4/6] Cythonizing skbio/stats/__subsample.pyx [5/6] Cythonizing skbio/stats/distance/_cutils.pyx [6/6] Cythonizing skbio/stats/ordination/_cutils.pyx running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext building 'skbio.metadata._intersection' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/metadata/_intersection.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/metadata/_intersection.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_intersection.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.__subsample' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/stats/__subsample.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/stats/__subsample.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/__subsample.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__subsample.cpython-311-x86_64-linux-gnu.so building 'skbio.alignment._ssw_wrapper' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-Iskbio/alignment -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/alignment/_ssw_wrapper.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/alignment/_ssw_wrapper.c:774: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/alignment/_ssw_wrapper.o -L/usr/lib/x86_64-linux-gnu -lssw -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_ssw_wrapper.cpython-311-x86_64-linux-gnu.so building 'skbio.diversity._phylogenetic' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' INFO: x86_64-linux-gnu-gcc: skbio/diversity/_phylogenetic.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from skbio/diversity/_phylogenetic.c:768: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/diversity/_phylogenetic.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_phylogenetic.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.ordination._cutils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' extra options: '-I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP' INFO: x86_64-linux-gnu-gcc: skbio/stats/ordination/_cutils.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/ordination/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_cutils.cpython-311-x86_64-linux-gnu.so building 'skbio.stats.distance._cutils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c' extra options: '-I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP' INFO: x86_64-linux-gnu-gcc: skbio/stats/distance/_cutils.c INFO: x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-skbio-0.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/python-skbio-0.5.8 build/temp.linux-x86_64-cpython-311/skbio/stats/distance/_cutils.o -L/usr/lib/x86_64-linux-gnu -o /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_cutils.cpython-311-x86_64-linux-gnu.so running install_lib creating /build/python-skbio-0.5.8/debian/python3-skbio creating /build/python-skbio-0.5.8/debian/python3-skbio/usr creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11 creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/__pycache__/workflow.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/__pycache__/_base.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__pycache__/test_workflow.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__pycache__/test_base.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests/test_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests/test_workflow.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_testing.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_exception.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_decorator.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_misc.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_warning.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/test_testing.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/test_misc.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/test_decorator.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/test_testing.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/test_decorator.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/test_misc.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/_warning.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/_misc.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/_testing.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/_decorator.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/util/_exception.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_ssw_wrapper.cpython-311-x86_64-linux-gnu.so -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_pairwise.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_repr.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_indexing.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_tabular_msa.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/test_tabular_msa.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/test_ssw.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/test_pairwise.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_ssw.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_pairwise.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_lib copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_lib/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_lib copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_repr.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_tabular_msa.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_pairwise.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_indexing.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_intersection.cpython-311-x86_64-linux-gnu.so -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_testing.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_repr.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_mixin.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_interval.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/test_mixin.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/test_interval.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/test_intersection.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_intersection.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_mixin.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_interval.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_repr.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_testing.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_mixin.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_interval.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__subsample.cpython-311-x86_64-linux-gnu.so -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__pycache__/power.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__pycache__/gradient.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__pycache__/composition.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__pycache__/_misc.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__pycache__/_subsample.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/__pycache__/test_subsample.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/__pycache__/test_power.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/__pycache__/test_misc.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/__pycache__/test_gradient.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/__pycache__/test_composition.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/gr_w_msg_out -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/cr_no_data_raw -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/cr_no_data_out -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/gr_wo_msg_raw -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/vr_real_raw -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/gr_wo_msg_out -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/vr_out -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/vr_real_out -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/cr_data_raw -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/cr_data_out -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/vr_raw -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/data/gr_w_msg_raw -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_composition.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_gradient.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_power.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_subsample.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/test_misc.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_cutils.cpython-311-x86_64-linux-gnu.so -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/_permdisp.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/_mantel.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/_permanova.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/_anosim.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/_bioenv.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/_utils.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/_base.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__pycache__/test_permdisp.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__pycache__/test_permanova.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__pycache__/test_mantel.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__pycache__/test_bioenv.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__pycache__/test_base.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__pycache__/test_anosim.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/dm4.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/dm2.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/exp_results_single_column.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/df.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/exp_results.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/dm3.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/dm.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/dm_reordered.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/data/df_extra_column.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_anosim.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permdisp.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_mantel.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_permanova.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/tests/test_bioenv.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_bioenv.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_mantel.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_utils.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_anosim.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_permdisp.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/_permanova.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/distance/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/__pycache__/_hommola.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/tests/__pycache__/test_hommola.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/tests/test_hommola.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/_hommola.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/evolve/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_cutils.cpython-311-x86_64-linux-gnu.so -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__pycache__/_principal_coordinate_analysis.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__pycache__/_canonical_correspondence_analysis.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__pycache__/_correspondence_analysis.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__pycache__/_utils.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__pycache__/_ordination_results.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__pycache__/_redundancy_analysis.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__pycache__/test_util.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__pycache__/test_redundancy_analysis.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__pycache__/test_principal_coordinate_analysis.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__pycache__/test_ordination_results.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__pycache__/test_correspondence_analysis.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__pycache__/test_canonical_correspondence_analysis.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/varechem.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_X -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_skbio -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_X -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_Y -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/varespec.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/L&L_CA_data -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_Y -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_redundancy_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_util.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_correspondence_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/tests/test_ordination_results.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_ordination_results.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_correspondence_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_utils.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_principal_coordinate_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_redundancy_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/ordination/_canonical_correspondence_analysis.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/power.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/_misc.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/composition.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/_subsample.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/stats/gradient.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/__pycache__/_majority_rule.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/__pycache__/_nj.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/__pycache__/_exception.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/__pycache__/_tree.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/__pycache__/test_tree.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/__pycache__/test_nj.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/__pycache__/test_majority_rule.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/test_nj.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/test_tree.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/test_majority_rule.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/_majority_rule.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/_tree.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/_nj.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/tree/_exception.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_fileobject.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_iosources.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/util.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/registry.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_exception.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_warning.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/test_util.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/test_registry.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/test_iosources.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/example_file.bz2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/big5_file.bz2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/big5_file.gz -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/example_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/real_file_2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/example_file.gz -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/real_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/big5_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/test_registry.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/test_iosources.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/test_util.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/emptyfile.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/taxdump.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/binary_dm.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/stockholm.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/gff3.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/genbank.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/qseq.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/phylip.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/ordination.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/newick.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/lsmat.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/fastq.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/fasta.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/_sequence_feature_vocabulary.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/_base.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/embl.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/clustal.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/blast7.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/_blast.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/blast6.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_taxdump.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_stockholm.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_sequence_feature_vocabulary.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_qseq.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_phylip.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_ordination.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_newick.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_lsmat.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_gff3.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_genbank.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_fastq.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_fasta.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_emptyfile.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_embl.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_clustal.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_blast7.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_blast6.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_binary_dm.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/test_base.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_invalid_differing_fields -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_long_qual.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error19 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error21 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_example3_scores -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error14 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_3_seqs_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_single_tree_without_id -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_6_blanks_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_default_single_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/tsv_10_fields -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_qual_vtab.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_blank_lines -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_seq_too_long -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_multi_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_extensive -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_invalid_tile -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_diff_ids.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_extensive_mixed -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_blanks_end_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/whitespace_only -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_custom_minimal -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_float -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_description_newline_replacement_none -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_max_width_1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/gff3_bad_wrong_columns -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error4 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_data_only -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_w_beginning_whitespace -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_dna_3_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_seq_too_short -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_trunc_in_title.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_ws_lines_end_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/wrapping_as_illumina.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/empty -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_custom_mixed_nans -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_single_record_upper -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_blanks_end_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_metadata_only -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_3_seqs_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_mixed_nans -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error18 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/gff3_multi_record -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error23 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_multi_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gc_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_gr -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/longreads_as_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error11 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_all_data_types -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_trunc_at_qual.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/wrapping_original_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error15 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_runon_references_mixed -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_blank_lines_between_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_single_record_lower -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_trunc_at_plus.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_single_reference -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_5_blanks_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_single_seq_sanger -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_multiple_msa -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_invalid_gibberish -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error3 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_gc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_rna -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_differing_seq_lengths -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_header_too_long -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_uniprot_record -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_invalid_y -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_single_record -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_invalid_differing_fields -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/tsv_8_fields -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_example2_scores -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_double_qual.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_invalid_lane -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error13 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_default_single_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_constructed -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_single_seq_long -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error16 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_trunc_at_seq.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_feature_level_record_no_FT -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_10_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_invalid_number_of_columns -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/taxdump_names.dmp -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_ws_lines_between_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_invalid_x -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_missing_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_single_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gr_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_variable_length_ids -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error17 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_default_multi_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_zero_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_default_multi_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_invalid_data_type -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_missing_rn_tag -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error10 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_differing_gc_data_length -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_qual_del.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_mixed_qual_scores -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error7 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_no_qual.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_and_blast7_default -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_custom_mixed_nans -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_no_data -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_single_record -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_missing_locus_name -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_multiple_trees -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/longreads_as_illumina.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_feature_level_record -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_invalid_read -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/gff3_single_record -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_single_record_simple -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gs_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_qual_space.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_custom_single_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_single_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_seq_sanger -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_2_seqs_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_legacy_format -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error6 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_missing_footer -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_nonstring_labels -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_two_of_each_metadata -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_single_record_lower -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_max_width_5 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_qual_scores_string -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_single_record_upper -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error12 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error20 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error9 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_malformed_data_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_single_tree_with_id -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_two_chunks -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_trunc_in_qual.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_invalid_column_types -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_invalid_filter -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_missing_reference_items -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_minimal -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_spaces.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_short_qual.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_max_width_1 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_runon_references -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_legacy_format -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_max_width_5 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_multiple_references -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_multi_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_blank_between_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_tabs.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_custom_minimal -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_blank_lines -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_invalid_no_data -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/taxdump_nodes.dmp -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_qual_tab.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_custom_multi_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_single_seq_short -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_qual_escape.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error24 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error8 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/gff3_dna -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_ws_lines_between_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_custom_multi_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_header_too_short -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_missing_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_no_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_qual_null.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_malformed_gf_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error22 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_double_seq.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_invalid_blank_sequence -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/longreads_original_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_after_header -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_tabular_msa_different_type -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/gff3_bad_missing_directive -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error5 -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_different_padding -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_custom_single_line -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/embl_multi_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_multi_seq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_invalid_type_in_column -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_blank_lines_between_records -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_whitespace_only_lines -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_lsmat.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_phylip.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_emptyfile.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_blast7.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_clustal.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_fasta.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_stockholm.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_newick.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_embl.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_binary_dm.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_fastq.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_taxdump.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_genbank.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_qseq.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_gff3.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_blast6.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_ordination.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/fasta.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/gff3.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/lsmat.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/qseq.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/binary_dm.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/_sequence_feature_vocabulary.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/ordination.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/newick.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/genbank.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/phylip.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/blast6.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/clustal.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/_blast.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/fastq.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/stockholm.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/blast7.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/embl.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/taxdump.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/emptyfile.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/_warning.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/util.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/_fileobject.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/_iosources.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/_exception.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/io/registry.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_genetic_code.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_rna.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_nucleotide_mixin.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_dna.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_grammared_sequence.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_protein.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_repr.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/distance.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/_sequence.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_sequence.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_rna.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_protein.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_nucleotide_sequences.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_grammared_sequence.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_genetic_code.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_dna.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/test_distance.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_dna.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_grammared_sequence.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_nucleotide_sequences.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_rna.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_protein.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_distance.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_genetic_code.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/tests/test_sequence.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_dna.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_repr.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_sequence.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_nucleotide_mixin.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_genetic_code.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_rna.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/distance.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_protein.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/sequence/_grammared_sequence.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_phylogenetic.cpython-311-x86_64-linux-gnu.so -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/_block.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/_util.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/_driver.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/test_util.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/test_driver.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/test_block.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/test_driver.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/test_util.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/test_block.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/__pycache__/_unifrac.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/__pycache__/test_unifrac.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/test_unifrac.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/_unifrac.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_lladser.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_gini.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_faith_pd.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_base.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_chao1.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_ace.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_lladser.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_gini.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_faith_pd.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_chao1.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_base.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_ace.cpython-311-pytest-7.2.1.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/__init__.cpython-311.pyc -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__ creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data creating /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_faith_pd.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_ace.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_gini.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_lladser.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_chao1.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_faith_pd.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_chao1.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_ace.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_gini.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_lladser.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_util.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_driver.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_block.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/_base.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/test.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/__init__.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio copying /build/python-skbio-0.5.8/.pybuild/cpython3_3.11_skbio/build/skbio/workflow.py -> /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/test_base.py to test_base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/test_workflow.py to test_workflow.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/test_testing.py to test_testing.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/test_decorator.py to test_decorator.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/test_misc.py to test_misc.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_warning.py to _warning.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_misc.py to _misc.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_testing.py to _testing.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_decorator.py to _decorator.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_exception.py to _exception.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/test_ssw.py to test_ssw.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/test_pairwise.py to test_pairwise.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/test_tabular_msa.py to test_tabular_msa.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_lib/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_repr.py to _repr.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_tabular_msa.py to _tabular_msa.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_pairwise.py to _pairwise.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_indexing.py to _indexing.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/test_intersection.py to test_intersection.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/test_mixin.py to test_mixin.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/test_interval.py to test_interval.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_repr.py to _repr.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_testing.py to _testing.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_mixin.py to _mixin.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_interval.py to _interval.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_composition.py to test_composition.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_gradient.py to test_gradient.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_power.py to test_power.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_subsample.py to test_subsample.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_misc.py to test_misc.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_base.py to test_base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_anosim.py to test_anosim.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_permdisp.py to test_permdisp.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_mantel.py to test_mantel.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_permanova.py to test_permanova.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_bioenv.py to test_bioenv.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_bioenv.py to _bioenv.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_mantel.py to _mantel.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_utils.py to _utils.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_anosim.py to _anosim.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_base.py to _base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_permdisp.py to _permdisp.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_permanova.py to _permanova.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests/test_hommola.py to test_hommola.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/_hommola.py to _hommola.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_redundancy_analysis.py to test_redundancy_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_util.py to test_util.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py to test_principal_coordinate_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py to test_canonical_correspondence_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_correspondence_analysis.py to test_correspondence_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_ordination_results.py to test_ordination_results.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_ordination_results.py to _ordination_results.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_correspondence_analysis.py to _correspondence_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_utils.py to _utils.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py to _principal_coordinate_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_redundancy_analysis.py to _redundancy_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_canonical_correspondence_analysis.py to _canonical_correspondence_analysis.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/power.py to power.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/_misc.py to _misc.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/composition.py to composition.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/_subsample.py to _subsample.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/gradient.py to gradient.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/test_nj.py to test_nj.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/test_tree.py to test_tree.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/test_majority_rule.py to test_majority_rule.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_majority_rule.py to _majority_rule.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_tree.py to _tree.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_nj.py to _nj.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_exception.py to _exception.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/test_registry.py to test_registry.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/test_iosources.py to test_iosources.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/test_util.py to test_util.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_base.py to test_base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_lsmat.py to test_lsmat.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_phylip.py to test_phylip.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_emptyfile.py to test_emptyfile.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_blast7.py to test_blast7.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_clustal.py to test_clustal.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_fasta.py to test_fasta.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_sequence_feature_vocabulary.py to test_sequence_feature_vocabulary.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_stockholm.py to test_stockholm.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_newick.py to test_newick.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_embl.py to test_embl.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_binary_dm.py to test_binary_dm.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_fastq.py to test_fastq.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_taxdump.py to test_taxdump.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_genbank.py to test_genbank.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_qseq.py to test_qseq.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_gff3.py to test_gff3.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_blast6.py to test_blast6.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_ordination.py to test_ordination.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/fasta.py to fasta.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/gff3.py to gff3.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/lsmat.py to lsmat.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/qseq.py to qseq.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/binary_dm.py to binary_dm.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/_sequence_feature_vocabulary.py to _sequence_feature_vocabulary.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/ordination.py to ordination.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/_base.py to _base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/newick.py to newick.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/genbank.py to genbank.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/phylip.py to phylip.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/blast6.py to blast6.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/clustal.py to clustal.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/_blast.py to _blast.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/fastq.py to fastq.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/stockholm.py to stockholm.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/blast7.py to blast7.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/embl.py to embl.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/taxdump.py to taxdump.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/emptyfile.py to emptyfile.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_warning.py to _warning.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/util.py to util.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_fileobject.py to _fileobject.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_iosources.py to _iosources.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_exception.py to _exception.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/registry.py to registry.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_dna.py to test_dna.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_grammared_sequence.py to test_grammared_sequence.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_nucleotide_sequences.py to test_nucleotide_sequences.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_rna.py to test_rna.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_protein.py to test_protein.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_distance.py to test_distance.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_genetic_code.py to test_genetic_code.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_sequence.py to test_sequence.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_dna.py to _dna.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_repr.py to _repr.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_sequence.py to _sequence.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_nucleotide_mixin.py to _nucleotide_mixin.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_genetic_code.py to _genetic_code.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_rna.py to _rna.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/distance.py to distance.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_protein.py to _protein.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_grammared_sequence.py to _grammared_sequence.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/test_driver.py to test_driver.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/test_util.py to test_util.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/test_block.py to test_block.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/test_unifrac.py to test_unifrac.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/_unifrac.py to _unifrac.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_base.py to test_base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_faith_pd.py to test_faith_pd.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_ace.py to test_ace.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_gini.py to test_gini.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_lladser.py to test_lladser.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_chao1.py to test_chao1.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_faith_pd.py to _faith_pd.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_base.py to _base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_chao1.py to _chao1.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_ace.py to _ace.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_gini.py to _gini.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_lladser.py to _lladser.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/_util.py to _util.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/_driver.py to _driver.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/_block.py to _block.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/_base.py to _base.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/test.py to test.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/workflow.py to workflow.cpython-311.pyc running install_egg_info running egg_info creating scikit_bio.egg-info writing scikit_bio.egg-info/PKG-INFO writing dependency_links to scikit_bio.egg-info/dependency_links.txt writing requirements to scikit_bio.egg-info/requires.txt writing top-level names to scikit_bio.egg-info/top_level.txt writing manifest file 'scikit_bio.egg-info/SOURCES.txt' reading manifest file 'scikit_bio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'simde-sse2.h' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution warning: no previously-included files matching '.coverage' found anywhere in distribution adding license file 'LICENSE.txt' writing manifest file 'scikit_bio.egg-info/SOURCES.txt' Copying scikit_bio.egg-info to /build/python-skbio-0.5.8/debian/python3-skbio/usr/lib/python3.11/dist-packages/scikit_bio-0.5.8.egg-info Skipping SOURCES.txt running install_scripts dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild debian/rules override_dh_sphinxdoc make[1]: Entering directory '/build/python-skbio-0.5.8' dh_link --package=python-skbio-doc \ /usr/share/javascript/mathjax/MathJax.js \ /usr/share/doc/python-skbio-doc/html/_static/MathJax.js dh_sphinxdoc --package=python-skbio-doc dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/bootstrap-sphinx.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/js/jquery-fix.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/copybutton.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/bootstrap-3.4.1/js/bootstrap.min.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/MathJax.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/js/jquery-1.12.4.min.js make[1]: Leaving directory '/build/python-skbio-0.5.8' dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python-skbio-doc' in '../python-skbio-doc_0.5.8-4_all.deb'. dpkg-deb: building package 'python3-skbio-dbgsym' in '../python3-skbio-dbgsym_0.5.8-4_amd64.deb'. dpkg-deb: building package 'python3-skbio' in '../python3-skbio_0.5.8-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../python-skbio_0.5.8-4_amd64.buildinfo dpkg-genchanges --build=binary -O../python-skbio_0.5.8-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2142233 and its subdirectories I: Current time: Sat Jun 8 14:33:37 -12 2024 I: pbuilder-time-stamp: 1717900417 Sun May 7 20:10:38 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Sun May 7 20:10:38 UTC 2023 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Sun May 7 20:53:20 UTC 2023 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Sun May 7 20:53:21 UTC 2023 I: python-skbio_0.5.8-4_amd64.changes: Format: 1.8 Date: Sun, 12 Feb 2023 11:41:27 +0100 Source: python-skbio Binary: python-skbio-doc python3-skbio python3-skbio-dbgsym Architecture: all amd64 Version: 0.5.8-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: python-skbio-doc - Data structures, algorithms, educational resources for bioinforma python3-skbio - Python3 data structures, algorithms, educational resources for bi Changes: python-skbio (0.5.8-4) unstable; urgency=medium . * Team upload. * Use debian package of SIMDe instead of the snapshot in simde-sse2.h Checksums-Sha1: c662a9375a03fada2988116b27a4224ac2d0a838 1060924 python-skbio-doc_0.5.8-4_all.deb 8e986eb0c809dd4f852be597fa3229f4e02d23cb 11734 python-skbio_0.5.8-4_amd64.buildinfo 02d1a33aa50e1a541e0bd27a37370593a4ac8435 1202500 python3-skbio-dbgsym_0.5.8-4_amd64.deb 817c3402f332e89bbdf5ccad31c12cccdfd7bee8 726676 python3-skbio_0.5.8-4_amd64.deb Checksums-Sha256: 98baead27b54717b4dfe29c285a48055847de16a5f62926d653e17bbe48741b4 1060924 python-skbio-doc_0.5.8-4_all.deb 9c85e8ce5dbfc55f05d427862b20bd653be9a94b3c3846f5f95879a229b3cd58 11734 python-skbio_0.5.8-4_amd64.buildinfo ae62723e6da7b50a8f7d62b2881f9d53d19531382bfe31c662bea36a652a1c76 1202500 python3-skbio-dbgsym_0.5.8-4_amd64.deb 9bb1b26c8a0c76a449f86492a1b380f2a005ef1e5aef6ba7a55b93e7a09530ad 726676 python3-skbio_0.5.8-4_amd64.deb Files: d79eb42d34d3ffeefaba293f7fca7199 1060924 doc optional python-skbio-doc_0.5.8-4_all.deb a88d83ce0c8aa70c26e8213db79e6f11 11734 python optional python-skbio_0.5.8-4_amd64.buildinfo 8bca2f97223f30c1b00b24bc88bb0cbb 1202500 debug optional python3-skbio-dbgsym_0.5.8-4_amd64.deb b9ef37db8ea7504908268ef1206a7c9b 726676 python optional python3-skbio_0.5.8-4_amd64.deb Sun May 7 20:53:32 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.qP7wmvAC/python-skbio_0.5.8-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.qP7wmvAC/python-skbio_0.5.8-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.qP7wmvAC/python-skbio_0.5.8-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.qP7wmvAC/b1/python-skbio_0.5.8-4_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.qP7wmvAC/b2/python-skbio_0.5.8-4_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 5.302s) 5.302s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.786s) 0.786s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.001s) 0.001s 1 call specialize Sun May 7 20:56:42 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Sun May 7 20:56:42 UTC 2023 I: python-skbio from bookworm built successfully and reproducibly on amd64. Sun May 7 20:56:55 UTC 2023 I: Submitting .buildinfo files to external archives: Sun May 7 20:56:55 UTC 2023 I: Submitting 16K b1/python-skbio_0.5.8-4_amd64.buildinfo.asc Sun May 7 20:56:58 UTC 2023 I: Submitting 16K b2/python-skbio_0.5.8-4_amd64.buildinfo.asc Sun May 7 20:57:00 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun May 7 20:57:00 UTC 2023 I: Done submitting .buildinfo files. Sun May 7 20:57:00 UTC 2023 I: Removing signed python-skbio_0.5.8-4_amd64.buildinfo.asc files: removed './b1/python-skbio_0.5.8-4_amd64.buildinfo.asc' removed './b2/python-skbio_0.5.8-4_amd64.buildinfo.asc'