I: pbuilder: network access will be disabled during build I: Current time: Wed Jul 9 08:50:30 +14 2025 I: pbuilder-time-stamp: 1752000630 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pyobjcryst_2.2.5-1.dsc] I: copying [./pyobjcryst_2.2.5.orig.tar.gz] I: copying [./pyobjcryst_2.2.5-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Jan 8 15:50:53 2023 gpgv: using EDDSA key EE9AD6F90520FA11F69F4824477B0DB0263A54D8 gpgv: issuer "stefanor@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./pyobjcryst_2.2.5-1.dsc: no acceptable signature found dpkg-source: info: extracting pyobjcryst in pyobjcryst-2.2.5 dpkg-source: info: unpacking pyobjcryst_2.2.5.orig.tar.gz dpkg-source: info: unpacking pyobjcryst_2.2.5-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying avoid_gitarchive.patch dpkg-source: info: applying install-layout-deb.patch dpkg-source: info: applying build-pyversion.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jul 8 18:50 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=ebd14b5448df461083b0af0f9b5a3a77 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2415928 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0IvBrb6b/pbuilderrc_wYqU --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0IvBrb6b/b2 --logfile b2/build.log pyobjcryst_2.2.5-1.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jul 7 14:05 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-setuptools, python3-pkg-resources, python3-all, python3-numpy, scons, python3-all-dev, libboost-all-dev, libobjcryst-dev (>= 2022.1.4) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19705 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on scons; however: Package scons is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-all-dev; however: Package libboost-all-dev is not installed. pbuilder-satisfydepends-dummy depends on libobjcryst-dev (>= 2022.1.4); however: Package libobjcryst-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-13{a} gfortran-13-x86-64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libann-cctbx0{a} libarchive-zip-perl{a} libblas3{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libbrotli1{a} libbsd0{a} libcbf1t64{a} libcbor0.10{a} libccp4-data{a} libccp4c0t64{a} libcctbx0{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-13-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu72{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap-2.5-0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnewmat10ldbl{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libobjcryst-dev{a} libobjcryst0{a} libopenmpi-dev{a} libopenmpi3t64{a} libpciaccess0{a} libpipeline1{a} libpmix-dev{a} libpmix2t64{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} librdmacm1t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtool{a} libuchardet0{a} libucx0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} scons{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libldap-common libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget xauth 0 packages upgraded, 263 newly installed, 0 to remove and 0 not upgraded. Need to get 190 MB of archives. After unpacking 1032 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.3-1 [809 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.3-1 [2139 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.1-8 [96.0 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240517-1 [93.3 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-1.2 [28.2 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.14.0-1+b2 [77.7 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 34 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.7p1-5 [964 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-3 [670 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-distutils all 3.12.3-3.1 [131 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20240422 [107 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.1.0-1 [836 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libgfortran-13-dev amd64 13.2.0-25 [847 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-25 [10.6 MB] Get: 64 http://deb.debian.org/debian unstable/main amd64 gfortran-13 amd64 13.2.0-25 [12.8 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3 [59.0 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3 [181 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-1 [61.5 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-1 [343 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-4+b1 [208 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-12 [23.7 MB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b1 [13.0 MB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.120-2 [7688 B] Get: 75 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.120-2 [38.1 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.120-2 [21.4 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1 [21.9 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 5.7.0-1 [60.7 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 5.7.1-2 [504 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-3 [8760 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libann-cctbx0 amd64 1.1.2+doc-9+b1 [32.4 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-3 [10.6 MB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-3 [233 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-3 [235 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libboost-atomic-dev amd64 1.83.0.2+b2 [3904 B] Get: 87 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-3 [239 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-3 [244 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 90 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83.0 amd64 1.83.0-3 [258 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83-dev amd64 1.83.0-3 [263 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libboost-container-dev amd64 1.83.0.2+b2 [4072 B] Get: 93 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-3 [230 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-3 [332 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-3 [372 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-3 [239 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-3 [230 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-3 [231 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-3 [269 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-3 [276 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83.0 amd64 1.83.0-3 [231 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83-dev amd64 1.83.0-3 [232 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libboost-context-dev amd64 1.83.0.2+b2 [3804 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83.0 amd64 1.83.0-3 [234 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83-dev amd64 1.83.0-3 [236 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine-dev amd64 1.83.0.2+b2 [3868 B] Get: 107 http://deb.debian.org/debian unstable/main amd64 libboost-date-time-dev amd64 1.83.0.2+b2 [3596 B] Get: 108 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 109 http://deb.debian.org/debian unstable/main amd64 libboost-exception1.83-dev amd64 1.83.0-3 [230 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 libboost-exception-dev amd64 1.83.0.2+b2 [3584 B] Get: 111 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3 [280 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-3 [295 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83.0 amd64 1.83.0-3 [253 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83-dev amd64 1.83.0-3 [264 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libboost-fiber-dev amd64 1.83.0.2+b2 [4028 B] Get: 116 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 117 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83.0 amd64 1.83.0-3 [358 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-3 [324 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-4+b1 [10.4 MB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-3 [342 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83.0 amd64 1.83.0-3 [466 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83-dev amd64 1.83.0-3 [536 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83-dev amd64 1.83.0-3 [383 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libboost-graph-dev amd64 1.83.0.2+b2 [3700 B] Get: 125 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10 [131 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [53.9 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-1 [70.1 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3+b1 [628 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.10.0-1+b1 [161 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4 [19.8 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1 [13.8 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.10.0-1+b1 [18.0 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.2-3 [652 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.16.0+ds-5 [1109 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 4.1.6-13.3 [2426 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-3 [271 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83.0 amd64 1.83.0-3 [279 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83-dev amd64 1.83.0-3 [283 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel-dev amd64 1.83.0.2+b2 [3728 B] Get: 150 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-3 [260 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 152 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83.0 amd64 1.83.0-3 [354 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83-dev amd64 1.83.0-3 [369 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libboost-json-dev amd64 1.83.0.2+b2 [3704 B] Get: 155 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83.0 amd64 1.83.0-3 [464 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83-dev amd64 1.83.0-3 [548 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libboost-locale-dev amd64 1.83.0.2+b2 [3924 B] Get: 158 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83.0 amd64 1.83.0-3 [700 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83-dev amd64 1.83.0-3 [871 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libboost-log-dev amd64 1.83.0.2+b2 [3796 B] Get: 161 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-3 [506 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-3 [549 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 164 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 4.1.6-13.3 [169 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3 [99.4 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3 [199 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-1 [647 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1 [36.2 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-7+b1 [393 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-7+b1 [164 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.10.0-1+b1 [250 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10 [181 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10 [107 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10 [60.8 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10 [305 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.2-3 [3940 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 4.1.6-13.3 [226 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 4.1.6-13.3 [972 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.15 [3152 B] Get: 183 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-3 [289 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 185 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83.0 amd64 1.83.0-3 [351 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.15 [2408 B] Get: 187 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83.0 amd64 1.83.0-3 [435 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83-dev amd64 1.83.0-3 [239 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python-dev amd64 1.83.0.2+b2 [3712 B] Get: 190 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83.0 amd64 1.83.0-3 [234 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83-dev amd64 1.83.0-3 [236 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libboost-nowide-dev amd64 1.83.0.2+b2 [3668 B] Get: 193 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83.0 amd64 1.83.0-3 [247 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83-dev amd64 1.83.0-3 [253 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libboost-numpy-dev amd64 1.83.0.2+b2 [3644 B] Get: 196 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-3 [345 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-3 [373 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 199 http://deb.debian.org/debian unstable/main amd64 libpython3.11t64 amd64 3.11.9-1 [1960 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.2-1 [155 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libpython3.11-dev amd64 3.11.9-1 [4513 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.11.8-1 [9560 B] Get: 203 http://deb.debian.org/debian unstable/main amd64 python3.11-dev amd64 3.11.9-1 [501 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.2.6-8 [150 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.11.8-1 [26.1 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83-dev amd64 1.83.0-3 [379 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 libboost-python-dev amd64 1.83.0.2+b2 [3892 B] Get: 209 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83.0 amd64 1.83.0-3 [238 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83-dev amd64 1.83.0-3 [240 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 libboost-random-dev amd64 1.83.0.2+b2 [3592 B] Get: 212 http://deb.debian.org/debian unstable/main amd64 libboost-regex-dev amd64 1.83.0.2+b2 [3864 B] Get: 213 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 214 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83.0 amd64 1.83.0-3 [280 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83-dev amd64 1.83.0-3 [245 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace-dev amd64 1.83.0.2+b2 [3592 B] Get: 217 http://deb.debian.org/debian unstable/main amd64 libboost-system-dev amd64 1.83.0.2+b2 [3736 B] Get: 218 http://deb.debian.org/debian unstable/main amd64 libboost-test-dev amd64 1.83.0.2+b2 [3628 B] Get: 219 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 220 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-3 [234 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-3 [236 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 223 http://deb.debian.org/debian unstable/main amd64 libboost1.83-tools-dev amd64 1.83.0-3 [1500 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libboost-tools-dev amd64 1.83.0.2+b2 [3768 B] Get: 225 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83.0 amd64 1.83.0-3 [245 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83-dev amd64 1.83.0-3 [248 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure-dev amd64 1.83.0.2+b2 [3688 B] Get: 228 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83.0 amd64 1.83.0-3 [336 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83-dev amd64 1.83.0-3 [422 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libboost-url-dev amd64 1.83.0.2+b2 [3732 B] Get: 231 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83.0 amd64 1.83.0-3 [434 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83-dev amd64 1.83.0-3 [483 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libboost-wave-dev amd64 1.83.0.2+b2 [3624 B] Get: 234 http://deb.debian.org/debian unstable/main amd64 libboost-all-dev amd64 1.83.0.2+b2 [3936 B] Get: 235 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-5 [215 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.8.0-1 [441 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get: 245 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.3 [1241 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 libcbf1t64 amd64 0.9.7+dfsg1-3.1+b1 [360 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libccp4-data all 8.0.0-3 [62.5 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 libccp4c0t64 amd64 8.0.0-3 [88.9 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 libcctbx0 amd64 2023.12+ds2+~3.17.0+ds1-4+b1 [2382 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 libnewmat10ldbl amd64 1.10.4-8 [147 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libobjcryst0 amd64 2022.1.4+ds1-2 [718 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libobjcryst-dev amd64 2022.1.4+ds1-2 [99.9 kB] Get: 254 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.3-1 [1951 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.3-1 [2107 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.3-1 [5069 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.11.8-1 [1072 B] Get: 258 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.3-1 [659 kB] Get: 259 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.11.8-1 [1056 B] Get: 260 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.3-1 [499 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.11.8-1 [1072 B] Get: 262 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [5465 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 scons all 4.5.2+dfsg-2 [676 kB] Fetched 190 MB in 16s (12.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19705 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20021 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../5-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21013 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_amd64.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../001-libpython3.12-minimal_3.12.3-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../002-python3.12-minimal_3.12.3-1_amd64.deb ... Unpacking python3.12-minimal (3.12.3-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../008-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-4_amd64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.1-8_amd64.deb ... Unpacking bsdextrautils (2.40.1-8) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../011-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.12.1-1_amd64.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../013-libbsd0_0.12.2-1_amd64.deb ... Unpacking libbsd0:amd64 (0.12.2-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../014-libedit2_3.1-20240517-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20240517-1) ... Selecting previously unselected package libcbor0.10:amd64. Preparing to unpack .../015-libcbor0.10_0.10.2-1.2_amd64.deb ... Unpacking libcbor0.10:amd64 (0.10.2-1.2) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../016-libfido2-1_1.14.0-1+b2_amd64.deb ... Unpacking libfido2-1:amd64 (1.14.0-1+b2) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../017-libkrb5support0_1.20.1-6+b1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../018-libcom-err2_1.47.1-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../019-libk5crypto3_1.20.1-6+b1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../020-libkeyutils1_1.6.3-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../021-libkrb5-3_1.20.1-6+b1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../022-libgssapi-krb5-2_1.20.1-6+b1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../023-openssh-client_1%3a9.7p1-5_amd64.deb ... Unpacking openssh-client (1:9.7p1-5) ... Selecting previously unselected package m4. Preparing to unpack .../024-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../025-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../026-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../027-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../028-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../029-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../030-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../031-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../032-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../033-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../034-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../035-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../036-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../037-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../038-libxml2_2.12.7+dfsg-3_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg-3) ... Selecting previously unselected package gettext. Preparing to unpack .../039-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../040-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../041-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../042-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../043-python3-pkg-resources_68.1.2-2_all.deb ... Unpacking python3-pkg-resources (68.1.2-2) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../044-python3-lib2to3_3.12.3-3.1_all.deb ... Unpacking python3-lib2to3 (3.12.3-3.1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../045-python3-distutils_3.12.3-3.1_all.deb ... Unpacking python3-distutils (3.12.3-3.1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../046-python3-setuptools_68.1.2-2_all.deb ... Unpacking python3-setuptools (68.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../047-dh-python_6.20240422_all.deb ... Unpacking dh-python (6.20240422) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../048-libgfortran5_14.1.0-1_amd64.deb ... Unpacking libgfortran5:amd64 (14.1.0-1) ... Selecting previously unselected package libgfortran-13-dev:amd64. Preparing to unpack .../049-libgfortran-13-dev_13.2.0-25_amd64.deb ... Unpacking libgfortran-13-dev:amd64 (13.2.0-25) ... Selecting previously unselected package gfortran-13-x86-64-linux-gnu. Preparing to unpack .../050-gfortran-13-x86-64-linux-gnu_13.2.0-25_amd64.deb ... Unpacking gfortran-13-x86-64-linux-gnu (13.2.0-25) ... Selecting previously unselected package gfortran-13. Preparing to unpack .../051-gfortran-13_13.2.0-25_amd64.deb ... Unpacking gfortran-13 (13.2.0-25) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../052-libnl-3-200_3.7.0-0.3_amd64.deb ... Unpacking libnl-3-200:amd64 (3.7.0-0.3) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../053-libnl-route-3-200_3.7.0-0.3_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.7.0-0.3) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../054-libibverbs1_52.0-1_amd64.deb ... Unpacking libibverbs1:amd64 (52.0-1) ... Selecting previously unselected package ibverbs-providers:amd64. Preparing to unpack .../055-ibverbs-providers_52.0-1_amd64.deb ... Unpacking ibverbs-providers:amd64 (52.0-1) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../056-icu-devtools_72.1-4+b1_amd64.deb ... Unpacking icu-devtools (72.1-4+b1) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../057-libaec0_1.1.3-1_amd64.deb ... Unpacking libaec0:amd64 (1.1.3-1) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../058-libz3-4_4.8.12-3.1+b2_amd64.deb ... Unpacking libz3-4:amd64 (4.8.12-3.1+b2) ... Selecting previously unselected package libllvm17t64:amd64. Preparing to unpack .../059-libllvm17t64_1%3a17.0.6-12_amd64.deb ... Unpacking libllvm17t64:amd64 (1:17.0.6-12) ... Selecting previously unselected package libamd-comgr2:amd64. Preparing to unpack .../060-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3+b1_amd64.deb ... Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../061-libdrm-common_2.4.120-2_all.deb ... Unpacking libdrm-common (2.4.120-2) ... Selecting previously unselected package libdrm2:amd64. Preparing to unpack .../062-libdrm2_2.4.120-2_amd64.deb ... Unpacking libdrm2:amd64 (2.4.120-2) ... Selecting previously unselected package libdrm-amdgpu1:amd64. Preparing to unpack .../063-libdrm-amdgpu1_2.4.120-2_amd64.deb ... Unpacking libdrm-amdgpu1:amd64 (2.4.120-2) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../064-libnuma1_2.0.18-1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.18-1) ... Selecting previously unselected package libhsakmt1:amd64. Preparing to unpack .../065-libhsakmt1_5.7.0-1_amd64.deb ... Unpacking libhsakmt1:amd64 (5.7.0-1) ... Selecting previously unselected package libhsa-runtime64-1. Preparing to unpack .../066-libhsa-runtime64-1_5.7.1-2_amd64.deb ... Unpacking libhsa-runtime64-1 (5.7.1-2) ... Selecting previously unselected package libamdhip64-5. Preparing to unpack .../067-libamdhip64-5_5.7.1-3_amd64.deb ... Unpacking libamdhip64-5 (5.7.1-3) ... Selecting previously unselected package libann-cctbx0. Preparing to unpack .../068-libann-cctbx0_1.1.2+doc-9+b1_amd64.deb ... Unpacking libann-cctbx0 (1.1.2+doc-9+b1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../069-libblas3_3.12.0-3_amd64.deb ... Unpacking libblas3:amd64 (3.12.0-3) ... Selecting previously unselected package libboost1.83-dev:amd64. Preparing to unpack .../070-libboost1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-atomic1.83.0:amd64. Preparing to unpack .../071-libboost-atomic1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-atomic1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-atomic1.83-dev:amd64. Preparing to unpack .../072-libboost-atomic1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-atomic1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-atomic-dev:amd64. Preparing to unpack .../073-libboost-atomic-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-atomic-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-chrono1.83.0t64:amd64. Preparing to unpack .../074-libboost-chrono1.83.0t64_1.83.0-3_amd64.deb ... Unpacking libboost-chrono1.83.0t64:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-chrono1.83-dev:amd64. Preparing to unpack .../075-libboost-chrono1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-chrono1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-chrono-dev:amd64. Preparing to unpack .../076-libboost-chrono-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-chrono-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-container1.83.0:amd64. Preparing to unpack .../077-libboost-container1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-container1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-container1.83-dev:amd64. Preparing to unpack .../078-libboost-container1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-container1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-container-dev:amd64. Preparing to unpack .../079-libboost-container-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-container-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-date-time1.83.0:amd64. Preparing to unpack .../080-libboost-date-time1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-date-time1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-serialization1.83.0:amd64. Preparing to unpack .../081-libboost-serialization1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-serialization1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-serialization1.83-dev:amd64. Preparing to unpack .../082-libboost-serialization1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-serialization1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-date-time1.83-dev:amd64. Preparing to unpack .../083-libboost-date-time1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-date-time1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-system1.83.0:amd64. Preparing to unpack .../084-libboost-system1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-system1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-system1.83-dev:amd64. Preparing to unpack .../085-libboost-system1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-system1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-thread1.83.0:amd64. Preparing to unpack .../086-libboost-thread1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-thread1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-thread1.83-dev:amd64. Preparing to unpack .../087-libboost-thread1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-thread1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-context1.83.0:amd64. Preparing to unpack .../088-libboost-context1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-context1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-context1.83-dev:amd64. Preparing to unpack .../089-libboost-context1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-context1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-context-dev:amd64. Preparing to unpack .../090-libboost-context-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-context-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-coroutine1.83.0:amd64. Preparing to unpack .../091-libboost-coroutine1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-coroutine1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-coroutine1.83-dev:amd64. Preparing to unpack .../092-libboost-coroutine1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-coroutine1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-coroutine-dev:amd64. Preparing to unpack .../093-libboost-coroutine-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-coroutine-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-date-time-dev:amd64. Preparing to unpack .../094-libboost-date-time-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-date-time-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-dev:amd64. Preparing to unpack .../095-libboost-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-exception1.83-dev:amd64. Preparing to unpack .../096-libboost-exception1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-exception1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-exception-dev:amd64. Preparing to unpack .../097-libboost-exception-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-exception-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-filesystem1.83.0:amd64. Preparing to unpack .../098-libboost-filesystem1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-filesystem1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-filesystem1.83-dev:amd64. Preparing to unpack .../099-libboost-filesystem1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-filesystem1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-fiber1.83.0:amd64. Preparing to unpack .../100-libboost-fiber1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-fiber1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-fiber1.83-dev:amd64. Preparing to unpack .../101-libboost-fiber1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-fiber1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-fiber-dev:amd64. Preparing to unpack .../102-libboost-fiber-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-fiber-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-filesystem-dev:amd64. Preparing to unpack .../103-libboost-filesystem-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-graph1.83.0:amd64. Preparing to unpack .../104-libboost-graph1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-graph1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-regex1.83.0:amd64. Preparing to unpack .../105-libboost-regex1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-regex1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libicu-dev:amd64. Preparing to unpack .../106-libicu-dev_72.1-4+b1_amd64.deb ... Unpacking libicu-dev:amd64 (72.1-4+b1) ... Selecting previously unselected package libboost-regex1.83-dev:amd64. Preparing to unpack .../107-libboost-regex1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-regex1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-test1.83.0:amd64. Preparing to unpack .../108-libboost-test1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-test1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-test1.83-dev:amd64. Preparing to unpack .../109-libboost-test1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-test1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-graph1.83-dev:amd64. Preparing to unpack .../110-libboost-graph1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-graph1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-graph-dev:amd64. Preparing to unpack .../111-libboost-graph-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-graph-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libevent-core-2.1-7t64:amd64. Preparing to unpack .../112-libevent-core-2.1-7t64_2.1.12-stable-10_amd64.deb ... Unpacking libevent-core-2.1-7t64:amd64 (2.1.12-stable-10) ... Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. Preparing to unpack .../113-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../114-libpsm-infinipath1_3.3+20.604758e7-6.3_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.3) ... Selecting previously unselected package libpsm2-2. Preparing to unpack .../115-libpsm2-2_11.2.185-2_amd64.deb ... Unpacking libpsm2-2 (11.2.185-2) ... Selecting previously unselected package librdmacm1t64:amd64. Preparing to unpack .../116-librdmacm1t64_52.0-1_amd64.deb ... Unpacking librdmacm1t64:amd64 (52.0-1) ... Selecting previously unselected package libfabric1:amd64. Preparing to unpack .../117-libfabric1_1.17.0-3+b1_amd64.deb ... Unpacking libfabric1:amd64 (1.17.0-3+b1) ... Selecting previously unselected package libhwloc15:amd64. Preparing to unpack .../118-libhwloc15_2.10.0-1+b1_amd64.deb ... Unpacking libhwloc15:amd64 (2.10.0-1+b1) ... Selecting previously unselected package libmunge2:amd64. Preparing to unpack .../119-libmunge2_0.5.15-4_amd64.deb ... Unpacking libmunge2:amd64 (0.5.15-4) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../120-libpciaccess0_0.17-3+b1_amd64.deb ... Unpacking libpciaccess0:amd64 (0.17-3+b1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../121-libxau6_1%3a1.0.9-1+b1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1+b1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../122-libxdmcp6_1%3a1.1.2-3+b1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../123-libxcb1_1.17.0-2_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../124-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../125-libx11-6_2%3a1.8.7-1+b1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.7-1+b1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../126-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package libxnvctrl0:amd64. Preparing to unpack .../127-libxnvctrl0_535.171.04-1_amd64.deb ... Unpacking libxnvctrl0:amd64 (535.171.04-1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../128-ocl-icd-libopencl1_2.3.2-1+b1_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../129-libhwloc-plugins_2.10.0-1+b1_amd64.deb ... Unpacking libhwloc-plugins:amd64 (2.10.0-1+b1) ... Selecting previously unselected package libpmix2t64:amd64. Preparing to unpack .../130-libpmix2t64_5.0.2-3_amd64.deb ... Unpacking libpmix2t64:amd64 (5.0.2-3) ... Selecting previously unselected package libucx0:amd64. Preparing to unpack .../131-libucx0_1.16.0+ds-5_amd64.deb ... Unpacking libucx0:amd64 (1.16.0+ds-5) ... Selecting previously unselected package libopenmpi3t64:amd64. Preparing to unpack .../132-libopenmpi3t64_4.1.6-13.3_amd64.deb ... Unpacking libopenmpi3t64:amd64 (4.1.6-13.3) ... Selecting previously unselected package libboost-mpi1.83.0. Preparing to unpack .../133-libboost-mpi1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-mpi1.83.0 (1.83.0-3) ... Selecting previously unselected package libboost-graph-parallel1.83.0. Preparing to unpack .../134-libboost-graph-parallel1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-graph-parallel1.83.0 (1.83.0-3) ... Selecting previously unselected package libboost-graph-parallel1.83-dev. Preparing to unpack .../135-libboost-graph-parallel1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-graph-parallel1.83-dev (1.83.0-3) ... Selecting previously unselected package libboost-graph-parallel-dev. Preparing to unpack .../136-libboost-graph-parallel-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-graph-parallel-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-iostreams1.83-dev:amd64. Preparing to unpack .../137-libboost-iostreams1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-iostreams1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-iostreams-dev:amd64. Preparing to unpack .../138-libboost-iostreams-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-json1.83.0:amd64. Preparing to unpack .../139-libboost-json1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-json1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-json1.83-dev:amd64. Preparing to unpack .../140-libboost-json1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-json1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-json-dev:amd64. Preparing to unpack .../141-libboost-json-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-json-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-locale1.83.0:amd64. Preparing to unpack .../142-libboost-locale1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-locale1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-locale1.83-dev:amd64. Preparing to unpack .../143-libboost-locale1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-locale1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-locale-dev:amd64. Preparing to unpack .../144-libboost-locale-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-locale-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-log1.83.0. Preparing to unpack .../145-libboost-log1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-log1.83.0 (1.83.0-3) ... Selecting previously unselected package libboost-log1.83-dev. Preparing to unpack .../146-libboost-log1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-log1.83-dev (1.83.0-3) ... Selecting previously unselected package libboost-log-dev. Preparing to unpack .../147-libboost-log-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-log-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-math1.83.0:amd64. Preparing to unpack .../148-libboost-math1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-math1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-math1.83-dev:amd64. Preparing to unpack .../149-libboost-math1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-math1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-math-dev:amd64. Preparing to unpack .../150-libboost-math-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-math-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../151-openmpi-common_4.1.6-13.3_all.deb ... Unpacking openmpi-common (4.1.6-13.3) ... Selecting previously unselected package libnl-3-dev:amd64. Preparing to unpack .../152-libnl-3-dev_3.7.0-0.3_amd64.deb ... Unpacking libnl-3-dev:amd64 (3.7.0-0.3) ... Selecting previously unselected package libnl-route-3-dev:amd64. Preparing to unpack .../153-libnl-route-3-dev_3.7.0-0.3_amd64.deb ... Unpacking libnl-route-3-dev:amd64 (3.7.0-0.3) ... Selecting previously unselected package libibverbs-dev:amd64. Preparing to unpack .../154-libibverbs-dev_52.0-1_amd64.deb ... Unpacking libibverbs-dev:amd64 (52.0-1) ... Selecting previously unselected package libnuma-dev:amd64. Preparing to unpack .../155-libnuma-dev_2.0.18-1_amd64.deb ... Unpacking libnuma-dev:amd64 (2.0.18-1) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../156-libltdl7_2.4.7-7+b1_amd64.deb ... Unpacking libltdl7:amd64 (2.4.7-7+b1) ... Selecting previously unselected package libltdl-dev:amd64. Preparing to unpack .../157-libltdl-dev_2.4.7-7+b1_amd64.deb ... Unpacking libltdl-dev:amd64 (2.4.7-7+b1) ... Selecting previously unselected package libhwloc-dev:amd64. Preparing to unpack .../158-libhwloc-dev_2.10.0-1+b1_amd64.deb ... Unpacking libhwloc-dev:amd64 (2.10.0-1+b1) ... Selecting previously unselected package libevent-2.1-7t64:amd64. Preparing to unpack .../159-libevent-2.1-7t64_2.1.12-stable-10_amd64.deb ... Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10) ... Selecting previously unselected package libevent-extra-2.1-7t64:amd64. Preparing to unpack .../160-libevent-extra-2.1-7t64_2.1.12-stable-10_amd64.deb ... Unpacking libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10) ... Selecting previously unselected package libevent-openssl-2.1-7t64:amd64. Preparing to unpack .../161-libevent-openssl-2.1-7t64_2.1.12-stable-10_amd64.deb ... Unpacking libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-10) ... Selecting previously unselected package libevent-dev. Preparing to unpack .../162-libevent-dev_2.1.12-stable-10_amd64.deb ... Unpacking libevent-dev (2.1.12-stable-10) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../163-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Selecting previously unselected package libpmix-dev:amd64. Preparing to unpack .../164-libpmix-dev_5.0.2-3_amd64.deb ... Unpacking libpmix-dev:amd64 (5.0.2-3) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../165-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../166-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../167-openmpi-bin_4.1.6-13.3_amd64.deb ... Unpacking openmpi-bin (4.1.6-13.3) ... Selecting previously unselected package libopenmpi-dev:amd64. Preparing to unpack .../168-libopenmpi-dev_4.1.6-13.3_amd64.deb ... Unpacking libopenmpi-dev:amd64 (4.1.6-13.3) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../169-mpi-default-dev_1.15_amd64.deb ... Unpacking mpi-default-dev (1.15) ... Selecting previously unselected package libboost-mpi1.83-dev. Preparing to unpack .../170-libboost-mpi1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-mpi1.83-dev (1.83.0-3) ... Selecting previously unselected package libboost-mpi-dev. Preparing to unpack .../171-libboost-mpi-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-mpi-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-python1.83.0. Preparing to unpack .../172-libboost-python1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-python1.83.0 (1.83.0-3) ... Selecting previously unselected package mpi-default-bin. Preparing to unpack .../173-mpi-default-bin_1.15_amd64.deb ... Unpacking mpi-default-bin (1.15) ... Selecting previously unselected package libboost-mpi-python1.83.0. Preparing to unpack .../174-libboost-mpi-python1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-mpi-python1.83.0 (1.83.0-3) ... Selecting previously unselected package libboost-mpi-python1.83-dev. Preparing to unpack .../175-libboost-mpi-python1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-mpi-python1.83-dev (1.83.0-3) ... Selecting previously unselected package libboost-mpi-python-dev. Preparing to unpack .../176-libboost-mpi-python-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-mpi-python-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-nowide1.83.0. Preparing to unpack .../177-libboost-nowide1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-nowide1.83.0 (1.83.0-3) ... Selecting previously unselected package libboost-nowide1.83-dev. Preparing to unpack .../178-libboost-nowide1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-nowide1.83-dev (1.83.0-3) ... Selecting previously unselected package libboost-nowide-dev. Preparing to unpack .../179-libboost-nowide-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-nowide-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-numpy1.83.0. Preparing to unpack .../180-libboost-numpy1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-numpy1.83.0 (1.83.0-3) ... Selecting previously unselected package libboost-numpy1.83-dev. Preparing to unpack .../181-libboost-numpy1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-numpy1.83-dev (1.83.0-3) ... Selecting previously unselected package libboost-numpy-dev. Preparing to unpack .../182-libboost-numpy-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-numpy-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-program-options1.83.0:amd64. Preparing to unpack .../183-libboost-program-options1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-program-options1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-program-options1.83-dev:amd64. Preparing to unpack .../184-libboost-program-options1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-program-options1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-program-options-dev:amd64. Preparing to unpack .../185-libboost-program-options-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-program-options-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libpython3.11t64:amd64. Preparing to unpack .../186-libpython3.11t64_3.11.9-1_amd64.deb ... Unpacking libpython3.11t64:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../187-libexpat1-dev_2.6.2-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.6.2-1) ... Selecting previously unselected package libpython3.11-dev:amd64. Preparing to unpack .../188-libpython3.11-dev_3.11.9-1_amd64.deb ... Unpacking libpython3.11-dev:amd64 (3.11.9-1) ... Selecting previously unselected package libpython3-dev:amd64. Preparing to unpack .../189-libpython3-dev_3.11.8-1_amd64.deb ... Unpacking libpython3-dev:amd64 (3.11.8-1) ... Selecting previously unselected package python3.11-dev. Preparing to unpack .../190-python3.11-dev_3.11.9-1_amd64.deb ... Unpacking python3.11-dev (3.11.9-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../191-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../192-libjs-sphinxdoc_7.2.6-8_all.deb ... Unpacking libjs-sphinxdoc (7.2.6-8) ... Selecting previously unselected package python3-dev. Preparing to unpack .../193-python3-dev_3.11.8-1_amd64.deb ... Unpacking python3-dev (3.11.8-1) ... Selecting previously unselected package libboost-python1.83-dev. Preparing to unpack .../194-libboost-python1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-python1.83-dev (1.83.0-3) ... Selecting previously unselected package libboost-python-dev. Preparing to unpack .../195-libboost-python-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-python-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-random1.83.0:amd64. Preparing to unpack .../196-libboost-random1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-random1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-random1.83-dev:amd64. Preparing to unpack .../197-libboost-random1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-random1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-random-dev:amd64. Preparing to unpack .../198-libboost-random-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-random-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-regex-dev:amd64. Preparing to unpack .../199-libboost-regex-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-regex-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-serialization-dev:amd64. Preparing to unpack .../200-libboost-serialization-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-serialization-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-stacktrace1.83.0:amd64. Preparing to unpack .../201-libboost-stacktrace1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-stacktrace1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-stacktrace1.83-dev:amd64. Preparing to unpack .../202-libboost-stacktrace1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-stacktrace1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-stacktrace-dev:amd64. Preparing to unpack .../203-libboost-stacktrace-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-stacktrace-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-system-dev:amd64. Preparing to unpack .../204-libboost-system-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-system-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-test-dev:amd64. Preparing to unpack .../205-libboost-test-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-test-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-thread-dev:amd64. Preparing to unpack .../206-libboost-thread-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-thread-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-timer1.83.0:amd64. Preparing to unpack .../207-libboost-timer1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-timer1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-timer1.83-dev:amd64. Preparing to unpack .../208-libboost-timer1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-timer1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-timer-dev:amd64. Preparing to unpack .../209-libboost-timer-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-timer-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost1.83-tools-dev. Preparing to unpack .../210-libboost1.83-tools-dev_1.83.0-3_amd64.deb ... Unpacking libboost1.83-tools-dev (1.83.0-3) ... Selecting previously unselected package libboost-tools-dev. Preparing to unpack .../211-libboost-tools-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-tools-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-type-erasure1.83.0:amd64. Preparing to unpack .../212-libboost-type-erasure1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-type-erasure1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-type-erasure1.83-dev:amd64. Preparing to unpack .../213-libboost-type-erasure1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-type-erasure1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-type-erasure-dev:amd64. Preparing to unpack .../214-libboost-type-erasure-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-type-erasure-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-url1.83.0:amd64. Preparing to unpack .../215-libboost-url1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-url1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-url1.83-dev:amd64. Preparing to unpack .../216-libboost-url1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-url1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-url-dev:amd64. Preparing to unpack .../217-libboost-url-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-url-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-wave1.83.0:amd64. Preparing to unpack .../218-libboost-wave1.83.0_1.83.0-3_amd64.deb ... Unpacking libboost-wave1.83.0:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-wave1.83-dev:amd64. Preparing to unpack .../219-libboost-wave1.83-dev_1.83.0-3_amd64.deb ... Unpacking libboost-wave1.83-dev:amd64 (1.83.0-3) ... Selecting previously unselected package libboost-wave-dev:amd64. Preparing to unpack .../220-libboost-wave-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-wave-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-all-dev. Preparing to unpack .../221-libboost-all-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-all-dev (1.83.0.2+b2) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../222-libbrotli1_1.1.0-2+b3_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b3) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../223-libsasl2-modules-db_2.1.28+dfsg1-6_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../224-libsasl2-2_2.1.28+dfsg1-6_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../225-libldap-2.5-0_2.5.17+dfsg-1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../226-libnghttp2-14_1.61.0-1+b1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.61.0-1+b1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../227-libpsl5t64_0.21.2-1.1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../228-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../229-libssh2-1t64_1.11.0-5_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.0-5) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../230-libcurl4t64_8.8.0-1_amd64.deb ... Unpacking libcurl4t64:amd64 (8.8.0-1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../231-libsz2_1.1.3-1_amd64.deb ... Unpacking libsz2:amd64 (1.1.3-1) ... Selecting previously unselected package libhdf5-103-1t64:amd64. Preparing to unpack .../232-libhdf5-103-1t64_1.10.10+repack-3.3_amd64.deb ... Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Selecting previously unselected package libcbf1t64:amd64. Preparing to unpack .../233-libcbf1t64_0.9.7+dfsg1-3.1+b1_amd64.deb ... Unpacking libcbf1t64:amd64 (0.9.7+dfsg1-3.1+b1) ... Selecting previously unselected package libccp4-data. Preparing to unpack .../234-libccp4-data_8.0.0-3_all.deb ... Unpacking libccp4-data (8.0.0-3) ... Selecting previously unselected package libccp4c0t64:amd64. Preparing to unpack .../235-libccp4c0t64_8.0.0-3_amd64.deb ... Unpacking libccp4c0t64:amd64 (8.0.0-3) ... Selecting previously unselected package libcctbx0. Preparing to unpack .../236-libcctbx0_2023.12+ds2+~3.17.0+ds1-4+b1_amd64.deb ... Unpacking libcctbx0 (2023.12+ds2+~3.17.0+ds1-4+b1) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../237-liblapack3_3.12.0-3_amd64.deb ... Unpacking liblapack3:amd64 (3.12.0-3) ... Selecting previously unselected package libnewmat10ldbl. Preparing to unpack .../238-libnewmat10ldbl_1.10.4-8_amd64.deb ... Unpacking libnewmat10ldbl (1.10.4-8) ... Selecting previously unselected package libobjcryst0. Preparing to unpack .../239-libobjcryst0_2022.1.4+ds1-2_amd64.deb ... Unpacking libobjcryst0 (2022.1.4+ds1-2) ... Selecting previously unselected package libobjcryst-dev. Preparing to unpack .../240-libobjcryst-dev_2022.1.4+ds1-2_amd64.deb ... Unpacking libobjcryst-dev (2022.1.4+ds1-2) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../241-libpython3.12-stdlib_3.12.3-1_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.3-1) ... Selecting previously unselected package libpython3.12t64:amd64. Preparing to unpack .../242-libpython3.12t64_3.12.3-1_amd64.deb ... Unpacking libpython3.12t64:amd64 (3.12.3-1) ... Selecting previously unselected package libpython3.12-dev:amd64. Preparing to unpack .../243-libpython3.12-dev_3.12.3-1_amd64.deb ... Unpacking libpython3.12-dev:amd64 (3.12.3-1) ... Selecting previously unselected package libpython3-all-dev:amd64. Preparing to unpack .../244-libpython3-all-dev_3.11.8-1_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.11.8-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../245-python3.12_3.12.3-1_amd64.deb ... Unpacking python3.12 (3.12.3-1) ... Selecting previously unselected package python3-all. Preparing to unpack .../246-python3-all_3.11.8-1_amd64.deb ... Unpacking python3-all (3.11.8-1) ... Selecting previously unselected package python3.12-dev. Preparing to unpack .../247-python3.12-dev_3.12.3-1_amd64.deb ... Unpacking python3.12-dev (3.12.3-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../248-python3-all-dev_3.11.8-1_amd64.deb ... Unpacking python3-all-dev (3.11.8-1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../249-python3-numpy_1%3a1.26.4+ds-10_amd64.deb ... Unpacking python3-numpy (1:1.26.4+ds-10) ... Selecting previously unselected package scons. Preparing to unpack .../250-scons_4.5.2+dfsg-2_all.deb ... Unpacking scons (4.5.2+dfsg-2) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libboost-python1.83.0 (1.83.0-3) ... Setting up libboost-program-options1.83.0:amd64 (1.83.0-3) ... Setting up libpciaccess0:amd64 (0.17-3+b1) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libboost-stacktrace1.83.0:amd64 (1.83.0-3) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libboost1.83-dev:amd64 (1.83.0-3) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-8) ... Setting up libboost-nowide1.83.0 (1.83.0-3) ... Setting up libboost-date-time1.83.0:amd64 (1.83.0-3) ... Setting up libboost-json1.83.0:amd64 (1.83.0-3) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libboost-timer1.83.0:amd64 (1.83.0-3) ... Setting up libcbor0.10:amd64 (0.10.2-1.2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-regex1.83.0:amd64 (1.83.0-3) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libboost-system1.83.0:amd64 (1.83.0-3) ... Setting up libboost-context1.83.0:amd64 (1.83.0-3) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libboost-program-options1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-random1.83.0:amd64 (1.83.0-3) ... Setting up libpython3.12-minimal:amd64 (3.12.3-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up libboost-thread1.83.0:amd64 (1.83.0-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libccp4-data (8.0.0-3) ... Setting up libboost-filesystem1.83.0:amd64 (1.83.0-3) ... Setting up libboost-url1.83.0:amd64 (1.83.0-3) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Jul 8 18:53:00 UTC 2025. Universal Time is now: Tue Jul 8 18:53:00 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:amd64 (1.83.0-3) ... Setting up libboost-serialization1.83.0:amd64 (1.83.0-3) ... Setting up libboost-numpy1.83.0 (1.83.0-3) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libmunge2:amd64 (0.5.15-4) ... Setting up libexpat1-dev:amd64 (2.6.2-1) ... Setting up libboost-program-options-dev:amd64 (1.83.0.2+b2) ... Setting up libann-cctbx0 (1.1.2+doc-9+b1) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libboost-chrono1.83.0t64:amd64 (1.83.0-3) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libboost-nowide1.83-dev (1.83.0-3) ... Setting up libhwloc15:amd64 (2.10.0-1+b1) ... Setting up libboost-stacktrace1.83-dev:amd64 (1.83.0-3) ... Setting up autopoint (0.21-14) ... Setting up libboost-numpy1.83-dev (1.83.0-3) ... Setting up icu-devtools (72.1-4+b1) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up libnewmat10ldbl (1.10.4-8) ... Setting up libltdl7:amd64 (2.4.7-7+b1) ... Setting up libboost-test1.83.0:amd64 (1.83.0-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:amd64 (14.1.0-1) ... Setting up libboost-fiber1.83.0:amd64 (1.83.0-3) ... Setting up libboost-atomic1.83-dev:amd64 (1.83.0-3) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libboost-atomic-dev:amd64 (1.83.0.2+b2) ... Setting up libnuma1:amd64 (2.0.18-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Setting up libboost-exception1.83-dev:amd64 (1.83.0-3) ... Setting up libccp4c0t64:amd64 (8.0.0-3) ... Setting up libboost-stacktrace-dev:amd64 (1.83.0.2+b2) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libnl-3-200:amd64 (3.7.0-0.3) ... Setting up libboost-graph1.83.0:amd64 (1.83.0-3) ... Setting up libpsm2-2 (11.2.185-2) ... Setting up openmpi-common (4.1.6-13.3) ... Setting up libboost-container1.83.0:amd64 (1.83.0-3) ... Setting up netbase (6.4) ... Setting up libboost-type-erasure1.83.0:amd64 (1.83.0-3) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libboost-dev:amd64 (1.83.0.2+b2) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10) ... Setting up libboost-system1.83-dev:amd64 (1.83.0-3) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libssh2-1t64:amd64 (1.11.0-5) ... Setting up libboost-math1.83.0:amd64 (1.83.0-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:amd64 (1.14.0-1+b2) ... Setting up libgfortran-13-dev:amd64 (13.2.0-25) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up libdrm-common (2.4.120-2) ... Setting up readline-common (8.2-4) ... Setting up libicu-dev:amd64 (72.1-4+b1) ... Setting up libxml2:amd64 (2.12.7+dfsg-3) ... Setting up libboost1.83-tools-dev (1.83.0-3) ... Setting up libsz2:amd64 (1.1.3-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libboost-wave1.83.0:amd64 (1.83.0-3) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up gettext (0.21-14+b1) ... Setting up libboost-coroutine1.83.0:amd64 (1.83.0-3) ... Setting up libboost-chrono1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-math1.83-dev:amd64 (1.83.0-3) ... Setting up libtool (2.4.7-7) ... Setting up libboost-chrono-dev:amd64 (1.83.0.2+b2) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... Setting up libboost-log1.83.0 (1.83.0-3) ... Setting up libboost-math-dev:amd64 (1.83.0.2+b2) ... Setting up libedit2:amd64 (3.1-20240517-1) ... Setting up libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-10) ... Setting up libboost-system-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-serialization1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-locale1.83.0:amd64 (1.83.0-3) ... Setting up libboost-test1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-url1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-tools-dev (1.83.0.2+b2) ... Setting up libboost-filesystem1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-exception-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-nowide-dev (1.83.0.2+b2) ... Setting up gfortran-13-x86-64-linux-gnu (13.2.0-25) ... Setting up libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.18-1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3) ... Setting up libboost-test-dev:amd64 (1.83.0.2+b2) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.4.7-7+b1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:amd64 (1.83.0-3) ... Setting up libllvm17t64:amd64 (1:17.0.6-12) ... Setting up libboost-container1.83-dev:amd64 (1.83.0-3) ... Setting up gfortran-13 (13.2.0-25) ... Setting up libboost-date-time1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-numpy-dev (1.83.0.2+b2) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libboost-regex1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-random1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-serialization-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-date-time-dev:amd64 (1.83.0.2+b2) ... Setting up libjs-sphinxdoc (7.2.6-8) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:amd64 (2.4.120-2) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3) ... Setting up groff-base (1.23.0-4) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libboost-url-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-dev:amd64 (2.10.0-1+b1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Setting up libboost-regex-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.120-2) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-3) ... Setting up libibverbs1:amd64 (52.0-1) ... Setting up libboost-json1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-wave1.83-dev:amd64 (1.83.0-3) ... Setting up libpython3.12-stdlib:amd64 (3.12.3-1) ... Setting up libboost-locale1.83-dev:amd64 (1.83.0-3) ... Setting up libcurl4t64:amd64 (8.8.0-1) ... Setting up ibverbs-providers:amd64 (52.0-1) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-3) ... Setting up openssh-client (1:9.7p1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpython3.11t64:amd64 (3.11.9-1) ... Setting up libboost-type-erasure1.83-dev:amd64 (1.83.0-3) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libboost-random-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-locale-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-wave-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libboost-graph1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-container-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-type-erasure-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-context1.83-dev:amd64 (1.83.0-3) ... Setting up libxnvctrl0:amd64 (535.171.04-1) ... Setting up libpython3.12t64:amd64 (3.12.3-1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3) ... Setting up libboost-coroutine1.83-dev:amd64 (1.83.0-3) ... Setting up libboost-fiber1.83-dev:amd64 (1.83.0-3) ... Setting up libpython3.11-dev:amd64 (3.11.9-1) ... Setting up libevent-dev (2.1.12-stable-10) ... Setting up librdmacm1t64:amd64 (52.0-1) ... Setting up libboost-coroutine-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-log1.83-dev (1.83.0-3) ... Setting up libboost-json-dev:amd64 (1.83.0.2+b2) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libboost-log-dev (1.83.0.2+b2) ... Setting up libhsakmt1:amd64 (5.7.0-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up libboost-fiber-dev:amd64 (1.83.0.2+b2) ... Setting up libfabric1:amd64 (1.17.0-3+b1) ... Setting up libboost-graph-dev:amd64 (1.83.0.2+b2) ... Setting up python3.11 (3.11.9-1) ... Setting up libpython3-dev:amd64 (3.11.8-1) ... Setting up libcbf1t64:amd64 (0.9.7+dfsg1-3.1+b1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:amd64 (3.12.3-1) ... Setting up libboost-context-dev:amd64 (1.83.0.2+b2) ... Setting up libibverbs-dev:amd64 (52.0-1) ... Setting up libhwloc-plugins:amd64 (2.10.0-1+b1) ... Setting up libpython3-all-dev:amd64 (3.11.8-1) ... Setting up python3.12-dev (3.12.3-1) ... Setting up libpmix2t64:amd64 (5.0.2-3) ... Setting up libhsa-runtime64-1 (5.7.1-2) ... Setting up python3-lib2to3 (3.12.3-3.1) ... Setting up libpmix-dev:amd64 (5.0.2-3) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-3.1) ... python3.12: can't get files for byte-compilation Setting up libcctbx0 (2023.12+ds2+~3.17.0+ds1-4+b1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up libobjcryst0 (2022.1.4+ds1-2) ... Setting up python3-all (3.11.8-1) ... Setting up libamdhip64-5 (5.7.1-3) ... Setting up python3-dev (3.11.8-1) ... Setting up libboost-python1.83-dev (1.83.0-3) ... Setting up scons (4.5.2+dfsg-2) ... Setting up python3-numpy (1:1.26.4+ds-10) ... Setting up libobjcryst-dev (2022.1.4+ds1-2) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up libucx0:amd64 (1.16.0+ds-5) ... Setting up libboost-python-dev (1.83.0.2+b2) ... Setting up libopenmpi3t64:amd64 (4.1.6-13.3) ... Setting up libboost-mpi1.83.0 (1.83.0-3) ... Setting up openmpi-bin (4.1.6-13.3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libboost-graph-parallel1.83.0 (1.83.0-3) ... Setting up mpi-default-bin (1.15) ... Setting up libopenmpi-dev:amd64 (4.1.6-13.3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libboost-graph-parallel1.83-dev (1.83.0-3) ... Setting up libboost-mpi-python1.83.0 (1.83.0-3) ... Setting up libboost-graph-parallel-dev (1.83.0.2+b2) ... Setting up mpi-default-dev (1.15) ... Setting up libboost-mpi1.83-dev (1.83.0-3) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libboost-mpi-python1.83-dev (1.83.0-3) ... Setting up libboost-mpi-python-dev (1.83.0.2+b2) ... Setting up libboost-all-dev (1.83.0.2+b2) ... Processing triggers for libc-bin (2.38-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/pyobjcryst-2.2.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pyobjcryst_2.2.5-1_source.changes dpkg-buildpackage: info: source package pyobjcryst dpkg-buildpackage: info: source version 2.2.5-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Stefano Rivera dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from pyobjcryst-2.2.5/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with numpy3,python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pyobjcryst-2.2.5' dh_clean rm -f -r src/pyobjcryst/version.cfg src/pyobjcryst.egg-info/ .pybuild build/ rm -f -r .sconf_temp/ .sconsign.dblite config.log src/pyobjcryst/_pyobjcryst.so find . -name "*.pyc" -delete rm -f -r dist src/pyobjcryst/_pyobjcryst.* .pytest_cache/ debian/pyobjcryst make[1]: Leaving directory '/build/reproducible-path/pyobjcryst-2.2.5' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with numpy3,python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild W: pybuild base:341: missing command (plugin=custom, method=configure, interpreter=python3.12, version=3.12) W: pybuild base:341: missing command (plugin=custom, method=configure, interpreter=python3.11, version=3.11) dh_auto_build -O--buildsystem=pybuild I: pybuild pybuild:308: mkdir -p debian/pyobjcryst I: pybuild base:311: scons python=/usr/bin/python3.12 build=debug develop prefix=debian/pyobjcryst scons: Reading SConscript files ... :1: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html Checking if compiler allows '-fno-strict-overflow'... yes Checking if compiler allows '-fno-strict-aliasing'... yes Checking for C++ library ObjCryst... yes Checking for C++ library boost_python312... yes scons: done reading SConscript files. scons: Building targets ... /usr/bin/python3.12 -Wignore setup.py egg_info running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'src' warning: no previously-included files matching '*.so' found under directory 'src' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' g++ -o build/debug-3.12/asymmetricunit_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/asymmetricunit_ext.cpp g++ -o build/debug-3.12/atom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/atom_ext.cpp g++ -o build/debug-3.12/crystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/crystal_ext.cpp In file included from build/debug-3.12/crystal_ext.cpp:46: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/diffractiondatasinglecrystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/diffractiondatasinglecrystal_ext.cpp In file included from build/debug-3.12/diffractiondatasinglecrystal_ext.cpp:32: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/general_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/general_ext.cpp g++ -o build/debug-3.12/globaloptim_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/globaloptim_ext.cpp g++ -o build/debug-3.12/globalscatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/globalscatteringpower_ext.cpp g++ -o build/debug-3.12/helpers.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/helpers.cpp g++ -o build/debug-3.12/indexing_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/indexing_ext.cpp In file included from build/debug-3.12/indexing_ext.cpp:35: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/io_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/io_ext.cpp In file included from build/debug-3.12/io_ext.cpp:32: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/lsq_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/lsq_ext.cpp g++ -o build/debug-3.12/molatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/molatom_ext.cpp g++ -o build/debug-3.12/molbond_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/molbond_ext.cpp g++ -o build/debug-3.12/molbondangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/molbondangle_ext.cpp g++ -o build/debug-3.12/moldihedralangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/moldihedralangle_ext.cpp g++ -o build/debug-3.12/molecule_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/molecule_ext.cpp g++ -o build/debug-3.12/objregistry_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/objregistry_ext.cpp g++ -o build/debug-3.12/polyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/polyhedron_ext.cpp g++ -o build/debug-3.12/powderpattern_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/powderpattern_ext.cpp In file included from build/debug-3.12/powderpattern_ext.cpp:33: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/powderpatternbackground_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/powderpatternbackground_ext.cpp g++ -o build/debug-3.12/powderpatterncomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/powderpatterncomponent_ext.cpp g++ -o build/debug-3.12/powderpatterndiffraction_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/powderpatterndiffraction_ext.cpp g++ -o build/debug-3.12/pyobjcryst.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/pyobjcryst.cpp g++ -o build/debug-3.12/python_streambuf.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/python_streambuf.cpp In file included from build/debug-3.12/python_streambuf.cpp:50: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/quaternion_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/quaternion_ext.cpp g++ -o build/debug-3.12/radiation_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/radiation_ext.cpp g++ -o build/debug-3.12/refinableobj_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/refinableobj_ext.cpp In file included from build/debug-3.12/refinableobj_ext.cpp:47: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/refinableobjclock_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/refinableobjclock_ext.cpp g++ -o build/debug-3.12/refinablepar_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/refinablepar_ext.cpp g++ -o build/debug-3.12/reflectionprofile_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/reflectionprofile_ext.cpp g++ -o build/debug-3.12/refobjopt_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/refobjopt_ext.cpp g++ -o build/debug-3.12/refpartype_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/refpartype_ext.cpp g++ -o build/debug-3.12/registerconverters.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/registerconverters.cpp g++ -o build/debug-3.12/restraint_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/restraint_ext.cpp g++ -o build/debug-3.12/rigidgroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/rigidgroup_ext.cpp g++ -o build/debug-3.12/scatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/scatterer_ext.cpp g++ -o build/debug-3.12/scatteringcomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/scatteringcomponent_ext.cpp g++ -o build/debug-3.12/scatteringcomponentlist_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/scatteringcomponentlist_ext.cpp g++ -o build/debug-3.12/scatteringdata_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/scatteringdata_ext.cpp g++ -o build/debug-3.12/scatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/scatteringpower_ext.cpp g++ -o build/debug-3.12/scatteringpoweratom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/scatteringpoweratom_ext.cpp g++ -o build/debug-3.12/scatteringpowersphere_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/scatteringpowersphere_ext.cpp g++ -o build/debug-3.12/spacegroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/spacegroup_ext.cpp g++ -o build/debug-3.12/stretchmode_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/stretchmode_ext.cpp g++ -o build/debug-3.12/unitcell_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/unitcell_ext.cpp g++ -o build/debug-3.12/zatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/zatom_ext.cpp g++ -o build/debug-3.12/zpolyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/zpolyhedron_ext.cpp g++ -o build/debug-3.12/zscatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.12 -Ibuild/debug-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.12/zscatterer_ext.cpp In file included from build/debug-3.12/zscatterer_ext.cpp:32: build/debug-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.12/_pyobjcryst.so -shared build/debug-3.12/asymmetricunit_ext.os build/debug-3.12/atom_ext.os build/debug-3.12/crystal_ext.os build/debug-3.12/diffractiondatasinglecrystal_ext.os build/debug-3.12/general_ext.os build/debug-3.12/globaloptim_ext.os build/debug-3.12/globalscatteringpower_ext.os build/debug-3.12/helpers.os build/debug-3.12/indexing_ext.os build/debug-3.12/io_ext.os build/debug-3.12/lsq_ext.os build/debug-3.12/molatom_ext.os build/debug-3.12/molbond_ext.os build/debug-3.12/molbondangle_ext.os build/debug-3.12/moldihedralangle_ext.os build/debug-3.12/molecule_ext.os build/debug-3.12/objregistry_ext.os build/debug-3.12/polyhedron_ext.os build/debug-3.12/powderpattern_ext.os build/debug-3.12/powderpatternbackground_ext.os build/debug-3.12/powderpatterncomponent_ext.os build/debug-3.12/powderpatterndiffraction_ext.os build/debug-3.12/pyobjcryst.os build/debug-3.12/python_streambuf.os build/debug-3.12/quaternion_ext.os build/debug-3.12/radiation_ext.os build/debug-3.12/refinableobj_ext.os build/debug-3.12/refinableobjclock_ext.os build/debug-3.12/refinablepar_ext.os build/debug-3.12/reflectionprofile_ext.os build/debug-3.12/refobjopt_ext.os build/debug-3.12/refpartype_ext.os build/debug-3.12/registerconverters.os build/debug-3.12/restraint_ext.os build/debug-3.12/rigidgroup_ext.os build/debug-3.12/scatterer_ext.os build/debug-3.12/scatteringcomponent_ext.os build/debug-3.12/scatteringcomponentlist_ext.os build/debug-3.12/scatteringdata_ext.os build/debug-3.12/scatteringpower_ext.os build/debug-3.12/scatteringpoweratom_ext.os build/debug-3.12/scatteringpowersphere_ext.os build/debug-3.12/spacegroup_ext.os build/debug-3.12/stretchmode_ext.os build/debug-3.12/unitcell_ext.os build/debug-3.12/zatom_ext.os build/debug-3.12/zpolyhedron_ext.os build/debug-3.12/zscatterer_ext.os -Lbuild/debug-3.12/debian/pyobjcryst/lib -lObjCryst -lboost_python312 Install file: "build/debug-3.12/_pyobjcryst.so" as "src/pyobjcryst/_pyobjcryst.so" scons: done building targets. I: pybuild pybuild:308: mkdir -p debian/pyobjcryst I: pybuild base:311: scons python=/usr/bin/python3.11 build=debug develop prefix=debian/pyobjcryst scons: Reading SConscript files ... :1: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html Checking if compiler allows '-fstack-protector-strong'... yes Checking if compiler allows '-fstack-clash-protection'... yes Checking if compiler allows '-fcf-protection'... yes Checking if compiler allows '-fwrapv'... yes Checking if compiler allows '-fno-strict-aliasing'... yes Checking for C++ library ObjCryst... yes Checking for C++ library boost_python311... yes scons: done reading SConscript files. scons: Building targets ... /usr/bin/python3.11 -Wignore setup.py egg_info running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'src' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' g++ -o build/debug-3.11/asymmetricunit_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/asymmetricunit_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/atom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/atom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/crystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/crystal_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/crystal_ext.cpp:46: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/diffractiondatasinglecrystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/diffractiondatasinglecrystal_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/diffractiondatasinglecrystal_ext.cpp:32: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/general_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/general_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/globaloptim_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/globaloptim_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/globalscatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/globalscatteringpower_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/helpers.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/helpers.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/indexing_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/indexing_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/indexing_ext.cpp:35: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/io_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/io_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/io_ext.cpp:32: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/lsq_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/lsq_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/molatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/molatom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/molbond_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/molbond_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/molbondangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/molbondangle_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/moldihedralangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/moldihedralangle_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/molecule_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/molecule_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/objregistry_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/objregistry_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/polyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/polyhedron_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/powderpattern_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/powderpattern_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/powderpattern_ext.cpp:33: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/powderpatternbackground_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/powderpatternbackground_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/powderpatterncomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/powderpatterncomponent_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/powderpatterndiffraction_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/powderpatterndiffraction_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/pyobjcryst.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/pyobjcryst.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/python_streambuf.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/python_streambuf.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/python_streambuf.cpp:50: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/quaternion_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/quaternion_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/radiation_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/radiation_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/refinableobj_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/refinableobj_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/refinableobj_ext.cpp:47: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/refinableobjclock_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/refinableobjclock_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/refinablepar_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/refinablepar_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/reflectionprofile_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/reflectionprofile_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/refobjopt_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/refobjopt_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/refpartype_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/refpartype_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/registerconverters.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/registerconverters.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/restraint_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/restraint_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/rigidgroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/rigidgroup_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/scatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/scatterer_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/scatteringcomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/scatteringcomponent_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/scatteringcomponentlist_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/scatteringcomponentlist_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/scatteringdata_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/scatteringdata_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/scatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/scatteringpower_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/scatteringpoweratom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/scatteringpoweratom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/scatteringpowersphere_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/scatteringpowersphere_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/spacegroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/spacegroup_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/stretchmode_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/stretchmode_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/unitcell_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/unitcell_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/zatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/zatom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/zpolyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/zpolyhedron_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/debug-3.11/zscatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -g -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -I/usr/include/python3.11 -Ibuild/debug-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/debug-3.11/zscatterer_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/debug-3.11/zscatterer_ext.cpp:32: build/debug-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/debug-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/debug-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/debug-3.11/_pyobjcryst.so -shared build/debug-3.11/asymmetricunit_ext.os build/debug-3.11/atom_ext.os build/debug-3.11/crystal_ext.os build/debug-3.11/diffractiondatasinglecrystal_ext.os build/debug-3.11/general_ext.os build/debug-3.11/globaloptim_ext.os build/debug-3.11/globalscatteringpower_ext.os build/debug-3.11/helpers.os build/debug-3.11/indexing_ext.os build/debug-3.11/io_ext.os build/debug-3.11/lsq_ext.os build/debug-3.11/molatom_ext.os build/debug-3.11/molbond_ext.os build/debug-3.11/molbondangle_ext.os build/debug-3.11/moldihedralangle_ext.os build/debug-3.11/molecule_ext.os build/debug-3.11/objregistry_ext.os build/debug-3.11/polyhedron_ext.os build/debug-3.11/powderpattern_ext.os build/debug-3.11/powderpatternbackground_ext.os build/debug-3.11/powderpatterncomponent_ext.os build/debug-3.11/powderpatterndiffraction_ext.os build/debug-3.11/pyobjcryst.os build/debug-3.11/python_streambuf.os build/debug-3.11/quaternion_ext.os build/debug-3.11/radiation_ext.os build/debug-3.11/refinableobj_ext.os build/debug-3.11/refinableobjclock_ext.os build/debug-3.11/refinablepar_ext.os build/debug-3.11/reflectionprofile_ext.os build/debug-3.11/refobjopt_ext.os build/debug-3.11/refpartype_ext.os build/debug-3.11/registerconverters.os build/debug-3.11/restraint_ext.os build/debug-3.11/rigidgroup_ext.os build/debug-3.11/scatterer_ext.os build/debug-3.11/scatteringcomponent_ext.os build/debug-3.11/scatteringcomponentlist_ext.os build/debug-3.11/scatteringdata_ext.os build/debug-3.11/scatteringpower_ext.os build/debug-3.11/scatteringpoweratom_ext.os build/debug-3.11/scatteringpowersphere_ext.os build/debug-3.11/spacegroup_ext.os build/debug-3.11/stretchmode_ext.os build/debug-3.11/unitcell_ext.os build/debug-3.11/zatom_ext.os build/debug-3.11/zpolyhedron_ext.os build/debug-3.11/zscatterer_ext.os -Lbuild/debug-3.11/debian/pyobjcryst/lib -lObjCryst -lboost_python311 Install file: "build/debug-3.11/_pyobjcryst.so" as "src/pyobjcryst/_pyobjcryst.so" scons: done building targets. debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/pyobjcryst-2.2.5' true make[1]: Leaving directory '/build/reproducible-path/pyobjcryst-2.2.5' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-pyobjcryst/ -O--buildsystem=pybuild I: pybuild base:311: scons python=/usr/bin/python3.12 prefix=debian/pyobjcryst install scons: Reading SConscript files ... :1: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html Checking if compiler allows '-fno-strict-overflow'... yes Checking if compiler allows '-fno-strict-aliasing'... yes Checking if compiler allows '-ffast-math'... yes Checking for C++ library ObjCryst... yes Checking for C++ library boost_python312... yes scons: done reading SConscript files. scons: Building targets ... g++ -o build/fast-3.12/asymmetricunit_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/asymmetricunit_ext.cpp g++ -o build/fast-3.12/atom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/atom_ext.cpp g++ -o build/fast-3.12/crystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/crystal_ext.cpp In file included from build/fast-3.12/crystal_ext.cpp:46: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.12/diffractiondatasinglecrystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/diffractiondatasinglecrystal_ext.cpp In file included from build/fast-3.12/diffractiondatasinglecrystal_ext.cpp:32: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.12/general_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/general_ext.cpp g++ -o build/fast-3.12/globaloptim_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/globaloptim_ext.cpp g++ -o build/fast-3.12/globalscatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/globalscatteringpower_ext.cpp g++ -o build/fast-3.12/helpers.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/helpers.cpp g++ -o build/fast-3.12/indexing_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/indexing_ext.cpp In file included from build/fast-3.12/indexing_ext.cpp:35: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.12/io_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/io_ext.cpp In file included from build/fast-3.12/io_ext.cpp:32: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.12/lsq_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/lsq_ext.cpp g++ -o build/fast-3.12/molatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/molatom_ext.cpp g++ -o build/fast-3.12/molbond_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/molbond_ext.cpp g++ -o build/fast-3.12/molbondangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/molbondangle_ext.cpp g++ -o build/fast-3.12/moldihedralangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/moldihedralangle_ext.cpp g++ -o build/fast-3.12/molecule_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/molecule_ext.cpp g++ -o build/fast-3.12/objregistry_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/objregistry_ext.cpp g++ -o build/fast-3.12/polyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/polyhedron_ext.cpp g++ -o build/fast-3.12/powderpattern_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/powderpattern_ext.cpp In file included from build/fast-3.12/powderpattern_ext.cpp:33: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.12/powderpatternbackground_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/powderpatternbackground_ext.cpp g++ -o build/fast-3.12/powderpatterncomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/powderpatterncomponent_ext.cpp g++ -o build/fast-3.12/powderpatterndiffraction_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/powderpatterndiffraction_ext.cpp g++ -o build/fast-3.12/pyobjcryst.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/pyobjcryst.cpp g++ -o build/fast-3.12/python_streambuf.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/python_streambuf.cpp In file included from build/fast-3.12/python_streambuf.cpp:50: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/fast-3.12/quaternion_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/quaternion_ext.cpp g++ -o build/fast-3.12/radiation_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/radiation_ext.cpp g++ -o build/fast-3.12/refinableobj_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/refinableobj_ext.cpp In file included from build/fast-3.12/refinableobj_ext.cpp:47: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.12/refinableobjclock_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/refinableobjclock_ext.cpp g++ -o build/fast-3.12/refinablepar_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/refinablepar_ext.cpp g++ -o build/fast-3.12/reflectionprofile_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/reflectionprofile_ext.cpp g++ -o build/fast-3.12/refobjopt_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/refobjopt_ext.cpp g++ -o build/fast-3.12/refpartype_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/refpartype_ext.cpp g++ -o build/fast-3.12/registerconverters.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/registerconverters.cpp g++ -o build/fast-3.12/restraint_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/restraint_ext.cpp g++ -o build/fast-3.12/rigidgroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/rigidgroup_ext.cpp g++ -o build/fast-3.12/scatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/scatterer_ext.cpp g++ -o build/fast-3.12/scatteringcomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/scatteringcomponent_ext.cpp g++ -o build/fast-3.12/scatteringcomponentlist_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/scatteringcomponentlist_ext.cpp g++ -o build/fast-3.12/scatteringdata_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/scatteringdata_ext.cpp g++ -o build/fast-3.12/scatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/scatteringpower_ext.cpp g++ -o build/fast-3.12/scatteringpoweratom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/scatteringpoweratom_ext.cpp g++ -o build/fast-3.12/scatteringpowersphere_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/scatteringpowersphere_ext.cpp g++ -o build/fast-3.12/spacegroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/spacegroup_ext.cpp g++ -o build/fast-3.12/stretchmode_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/stretchmode_ext.cpp g++ -o build/fast-3.12/unitcell_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/unitcell_ext.cpp g++ -o build/fast-3.12/zatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/zatom_ext.cpp g++ -o build/fast-3.12/zpolyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/zpolyhedron_ext.cpp g++ -o build/fast-3.12/zscatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -fno-strict-overflow -Wsign-compare -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.12 -Ibuild/fast-3.12/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.12/zscatterer_ext.cpp In file included from build/fast-3.12/zscatterer_ext.cpp:32: build/fast-3.12/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.12/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.12/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.12/python_streambuf.hpp:374:72: build/fast-3.12/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.12/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.12/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.12/_pyobjcryst.so -s -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/fast-3.12/asymmetricunit_ext.os build/fast-3.12/atom_ext.os build/fast-3.12/crystal_ext.os build/fast-3.12/diffractiondatasinglecrystal_ext.os build/fast-3.12/general_ext.os build/fast-3.12/globaloptim_ext.os build/fast-3.12/globalscatteringpower_ext.os build/fast-3.12/helpers.os build/fast-3.12/indexing_ext.os build/fast-3.12/io_ext.os build/fast-3.12/lsq_ext.os build/fast-3.12/molatom_ext.os build/fast-3.12/molbond_ext.os build/fast-3.12/molbondangle_ext.os build/fast-3.12/moldihedralangle_ext.os build/fast-3.12/molecule_ext.os build/fast-3.12/objregistry_ext.os build/fast-3.12/polyhedron_ext.os build/fast-3.12/powderpattern_ext.os build/fast-3.12/powderpatternbackground_ext.os build/fast-3.12/powderpatterncomponent_ext.os build/fast-3.12/powderpatterndiffraction_ext.os build/fast-3.12/pyobjcryst.os build/fast-3.12/python_streambuf.os build/fast-3.12/quaternion_ext.os build/fast-3.12/radiation_ext.os build/fast-3.12/refinableobj_ext.os build/fast-3.12/refinableobjclock_ext.os build/fast-3.12/refinablepar_ext.os build/fast-3.12/reflectionprofile_ext.os build/fast-3.12/refobjopt_ext.os build/fast-3.12/refpartype_ext.os build/fast-3.12/registerconverters.os build/fast-3.12/restraint_ext.os build/fast-3.12/rigidgroup_ext.os build/fast-3.12/scatterer_ext.os build/fast-3.12/scatteringcomponent_ext.os build/fast-3.12/scatteringcomponentlist_ext.os build/fast-3.12/scatteringdata_ext.os build/fast-3.12/scatteringpower_ext.os build/fast-3.12/scatteringpoweratom_ext.os build/fast-3.12/scatteringpowersphere_ext.os build/fast-3.12/spacegroup_ext.os build/fast-3.12/stretchmode_ext.os build/fast-3.12/unitcell_ext.os build/fast-3.12/zatom_ext.os build/fast-3.12/zpolyhedron_ext.os build/fast-3.12/zscatterer_ext.os -Lbuild/fast-3.12/debian/pyobjcryst/lib -lObjCryst -lboost_python312 resolve_distutils_target(["install"], ["build/fast-3.12/_pyobjcryst.so"]) Mkdir("build/lib.linux-x86_64-cpython-312/pyobjcryst") Copy("build/lib.linux-x86_64-cpython-312/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so", "build/fast-3.12/_pyobjcryst.so") Touch("build/lib.linux-x86_64-cpython-312/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so") /usr/bin/python3.12 setup.py install --install-layout=deb --prefix=debian/pyobjcryst /build/reproducible-path/pyobjcryst-2.2.5/setup.py:19: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html from numpy.distutils.misc_util import get_numpy_include_dirs running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` and ``easy_install``. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://github.com/pypa/setuptools/issues/917 for details. ******************************************************************************** !! self.initialize_options() Checking .pth file support in debian/pyobjcryst/lib/python3/dist-packages/ /usr/bin/python3.12 -E -c pass TEST FAILED: debian/pyobjcryst/lib/python3/dist-packages/ does NOT support .pth files bad install directory or PYTHONPATH You are attempting to install a package to a directory that is not on PYTHONPATH and which Python does not read ".pth" files from. The installation directory you specified (via --install-dir, --prefix, or the distutils default setting) was: debian/pyobjcryst/lib/python3/dist-packages/ and your PYTHONPATH environment variable currently contains: '' Here are some of your options for correcting the problem: * You can choose a different installation directory, i.e., one that is on PYTHONPATH or supports .pth files * You can add the installation directory to the PYTHONPATH environment variable. (It must then also be on PYTHONPATH whenever you run Python and want to use the package(s) you are installing.) * You can set up the installation directory to support ".pth" files by using one of the approaches described here: https://setuptools.pypa.io/en/latest/deprecated/easy_install.html#custom-installation-locations Please make the appropriate changes for your system and try again. running bdist_egg running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'src' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py copying src/pyobjcryst/fourier.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatterer.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/io.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/version.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/lsq.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/radiation.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/unitcell.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/general.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/polyhedron.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/spacegroup.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/powderpattern.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/globaloptim.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/indexing.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/utils.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/diffractiondatasinglecrystal.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/globals.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/__init__.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/molecule.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/atom.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatteringpower.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatteringpowersphere.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/scatteringdata.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/reflectionprofile.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/refinableobj.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/crystal.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst copying src/pyobjcryst/zscatterer.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst creating build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/debug.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testindexing.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testlsq.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testrefinableobj.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testradiation.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testcrystal.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testglobaloptim.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testspacegroup.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testclocks.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttest.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testutils.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/run.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testpowderpattern.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/__init__.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttestutils.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testconverters.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testmolecule.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests copying src/pyobjcryst/tests/testcif.py -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyobjcryst.tests.testdata' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyobjcryst.tests.testdata' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyobjcryst.tests.testdata' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyobjcryst.tests.testdata' to be distributed and are already explicitly excluding 'pyobjcryst.tests.testdata' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying src/pyobjcryst/version.cfg -> build/lib.linux-x86_64-cpython-312/pyobjcryst creating build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ag_silver.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/BaTiO3.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaTiO3.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CeO2.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/NaCl.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ni.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbS_galena.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbTe.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si_setting2.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/caffeine.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/cime.fhz -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ni.stru -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata running build_ext creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/fourier.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/io.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/version.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/lsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/radiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/unitcell.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/general.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/polyhedron.py -> build/bdist.linux-x86_64/egg/pyobjcryst creating build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/debug.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testindexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testlsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testrefinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testradiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests creating build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/PbTe.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/NaCl.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Ag_silver.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/ni.stru -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Si.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/PbS_galena.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Si_setting2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CeO2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Ni.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/paracetamol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/cime.fhz -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/BaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/caffeine.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/CaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testcrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testglobaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testspacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testclocks.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/pyobjcrysttest.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/run.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testpowderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/pyobjcrysttestutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testconverters.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testmolecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/tests/testcif.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-312/pyobjcryst/spacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/powderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/globaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/indexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/utils.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/diffractiondatasinglecrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/globals.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/molecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/atom.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatteringpower.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatteringpowersphere.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/version.cfg -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/scatteringdata.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/reflectionprofile.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/refinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/crystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-312/pyobjcryst/zscatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/fourier.py to fourier.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatterer.py to scatterer.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/io.py to io.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/version.py to version.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/lsq.py to lsq.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/radiation.py to radiation.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/unitcell.py to unitcell.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/general.py to general.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/polyhedron.py to polyhedron.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/debug.py to debug.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testindexing.py to testindexing.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testlsq.py to testlsq.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testrefinableobj.py to testrefinableobj.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testradiation.py to testradiation.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcrystal.py to testcrystal.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testglobaloptim.py to testglobaloptim.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testspacegroup.py to testspacegroup.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testclocks.py to testclocks.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttest.py to pyobjcrysttest.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testutils.py to testutils.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/run.py to run.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testpowderpattern.py to testpowderpattern.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/__init__.py to __init__.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttestutils.py to pyobjcrysttestutils.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testconverters.py to testconverters.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testmolecule.py to testmolecule.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcif.py to testcif.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/spacegroup.py to spacegroup.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/powderpattern.py to powderpattern.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globaloptim.py to globaloptim.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/indexing.py to indexing.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/utils.py to utils.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/diffractiondatasinglecrystal.py to diffractiondatasinglecrystal.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globals.py to globals.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/__init__.py to __init__.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/molecule.py to molecule.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/atom.py to atom.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpower.py to scatteringpower.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpowersphere.py to scatteringpowersphere.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringdata.py to scatteringdata.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/reflectionprofile.py to reflectionprofile.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/refinableobj.py to refinableobj.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/crystal.py to crystal.cpython-312.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/zscatterer.py to zscatterer.cpython-312.pyc creating stub loader for pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/_pyobjcryst.py to _pyobjcryst.cpython-312.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/not-zip-safe -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt creating dist creating 'dist/pyobjcryst-2.2.5-py3.12-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing pyobjcryst-2.2.5-py3.12-linux-x86_64.egg creating /build/reproducible-path/pyobjcryst-2.2.5/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2.2.5-py3.12-linux-x86_64.egg Extracting pyobjcryst-2.2.5-py3.12-linux-x86_64.egg to /build/reproducible-path/pyobjcryst-2.2.5/debian/pyobjcryst/lib/python3/dist-packages Installed /build/reproducible-path/pyobjcryst-2.2.5/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2.2.5-py3.12-linux-x86_64.egg Processing dependencies for pyobjcryst==2.2.5 Searching for numpy==1.26.4 Best match: numpy 1.26.4 Installing f2py script to debian/pyobjcryst/bin Installing f2py3 script to debian/pyobjcryst/bin Installing f2py3.12 script to debian/pyobjcryst/bin Installing f2py3.11 script to debian/pyobjcryst/bin Using /usr/lib/python3/dist-packages Finished processing dependencies for pyobjcryst==2.2.5 scons: done building targets. I: pybuild base:311: scons python=/usr/bin/python3.11 prefix=debian/pyobjcryst install scons: Reading SConscript files ... :1: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html Checking if compiler allows '-fstack-protector-strong'... yes Checking if compiler allows '-fstack-clash-protection'... yes Checking if compiler allows '-fcf-protection'... yes Checking if compiler allows '-fwrapv'... yes Checking if compiler allows '-fno-strict-aliasing'... yes Checking if compiler allows '-ffast-math'... yes Checking for C++ library ObjCryst... yes Checking for C++ library boost_python311... yes scons: done reading SConscript files. scons: Building targets ... g++ -o build/fast-3.11/asymmetricunit_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/asymmetricunit_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/atom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/atom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/crystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/crystal_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/crystal_ext.cpp:46: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.11/diffractiondatasinglecrystal_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/diffractiondatasinglecrystal_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/diffractiondatasinglecrystal_ext.cpp:32: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.11/general_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/general_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/globaloptim_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/globaloptim_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/globalscatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/globalscatteringpower_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/helpers.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/helpers.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/indexing_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/indexing_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/indexing_ext.cpp:35: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.11/io_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/io_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/io_ext.cpp:32: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.11/lsq_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/lsq_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/molatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/molatom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/molbond_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/molbond_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/molbondangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/molbondangle_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/moldihedralangle_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/moldihedralangle_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/molecule_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/molecule_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/objregistry_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/objregistry_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/polyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/polyhedron_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/powderpattern_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/powderpattern_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/powderpattern_ext.cpp:33: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.11/powderpatternbackground_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/powderpatternbackground_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/powderpatterncomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/powderpatterncomponent_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/powderpatterndiffraction_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/powderpatterndiffraction_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/pyobjcryst.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/pyobjcryst.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/python_streambuf.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/python_streambuf.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/python_streambuf.cpp:50: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' g++ -o build/fast-3.11/quaternion_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/quaternion_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/radiation_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/radiation_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/refinableobj_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/refinableobj_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/refinableobj_ext.cpp:47: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.11/refinableobjclock_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/refinableobjclock_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/refinablepar_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/refinablepar_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/reflectionprofile_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/reflectionprofile_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/refobjopt_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/refobjopt_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/refpartype_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/refpartype_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/registerconverters.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/registerconverters.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/restraint_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/restraint_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/rigidgroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/rigidgroup_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/scatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/scatterer_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/scatteringcomponent_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/scatteringcomponent_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/scatteringcomponentlist_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/scatteringcomponentlist_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/scatteringdata_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/scatteringdata_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/scatteringpower_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/scatteringpower_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/scatteringpoweratom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/scatteringpoweratom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/scatteringpowersphere_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/scatteringpowersphere_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/spacegroup_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/spacegroup_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/stretchmode_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/stretchmode_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/unitcell_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/unitcell_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/zatom_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/zatom_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/zpolyhedron_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/zpolyhedron_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -o build/fast-3.11/zscatterer_ext.os -c -DBOOST_ERROR_CODE_HEADER_ONLY -std=c++11 -Wsign-compare -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fwrapv -Wall -fno-strict-aliasing -O3 -ffast-math -fPIC -DBOOST_ERROR_CODE_HEADER_ONLY -DNDEBUG -I/usr/include/python3.11 -Ibuild/fast-3.11/debian/pyobjcryst/include -I/usr/lib/python3/dist-packages/numpy/core/include build/fast-3.11/zscatterer_ext.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from build/fast-3.11/zscatterer_ext.cpp:32: build/fast-3.11/python_streambuf.hpp: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()': build/fast-3.11/python_streambuf.hpp:530:7: warning: 'throw' will always call 'terminate' [-Wterminate] 530 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 531 | "Problem closing python ostream.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | " Known limitation: the error is unrecoverable. Sorry.\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | " Suggestion for programmer: add ostream.flush() before" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | " returning."); | ~~~~~~~~~~~~~~ build/fast-3.11/python_streambuf.hpp:530:7: note: in C++11 destructors default to 'noexcept' In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ In member function 'boost::optional boost_adaptbx::python::streambuf::seekoff_without_calling_python(off_type, std::ios_base::seekdir, std::ios_base::openmode)', inlined from 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)' at build/fast-3.11/python_streambuf.hpp:374:72: build/fast-3.11/python_streambuf.hpp:461:16: warning: 'failure.boost::optional::.boost::optional_detail::tc_optional_base::m_storage' may be used uninitialized [-Wmaybe-uninitialized] 461 | return failure; | ^~~~~~~ build/fast-3.11/python_streambuf.hpp: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(off_type, std::ios_base::seekdir, std::ios_base::openmode)': build/fast-3.11/python_streambuf.hpp:428:39: note: 'failure' declared here 428 | boost::optional const failure; | ^~~~~~~ g++ -o build/fast-3.11/_pyobjcryst.so -s -shared -Wl,-O1 -Wl,-Bsymbolic-functions build/fast-3.11/asymmetricunit_ext.os build/fast-3.11/atom_ext.os build/fast-3.11/crystal_ext.os build/fast-3.11/diffractiondatasinglecrystal_ext.os build/fast-3.11/general_ext.os build/fast-3.11/globaloptim_ext.os build/fast-3.11/globalscatteringpower_ext.os build/fast-3.11/helpers.os build/fast-3.11/indexing_ext.os build/fast-3.11/io_ext.os build/fast-3.11/lsq_ext.os build/fast-3.11/molatom_ext.os build/fast-3.11/molbond_ext.os build/fast-3.11/molbondangle_ext.os build/fast-3.11/moldihedralangle_ext.os build/fast-3.11/molecule_ext.os build/fast-3.11/objregistry_ext.os build/fast-3.11/polyhedron_ext.os build/fast-3.11/powderpattern_ext.os build/fast-3.11/powderpatternbackground_ext.os build/fast-3.11/powderpatterncomponent_ext.os build/fast-3.11/powderpatterndiffraction_ext.os build/fast-3.11/pyobjcryst.os build/fast-3.11/python_streambuf.os build/fast-3.11/quaternion_ext.os build/fast-3.11/radiation_ext.os build/fast-3.11/refinableobj_ext.os build/fast-3.11/refinableobjclock_ext.os build/fast-3.11/refinablepar_ext.os build/fast-3.11/reflectionprofile_ext.os build/fast-3.11/refobjopt_ext.os build/fast-3.11/refpartype_ext.os build/fast-3.11/registerconverters.os build/fast-3.11/restraint_ext.os build/fast-3.11/rigidgroup_ext.os build/fast-3.11/scatterer_ext.os build/fast-3.11/scatteringcomponent_ext.os build/fast-3.11/scatteringcomponentlist_ext.os build/fast-3.11/scatteringdata_ext.os build/fast-3.11/scatteringpower_ext.os build/fast-3.11/scatteringpoweratom_ext.os build/fast-3.11/scatteringpowersphere_ext.os build/fast-3.11/spacegroup_ext.os build/fast-3.11/stretchmode_ext.os build/fast-3.11/unitcell_ext.os build/fast-3.11/zatom_ext.os build/fast-3.11/zpolyhedron_ext.os build/fast-3.11/zscatterer_ext.os -Lbuild/fast-3.11/debian/pyobjcryst/lib -lObjCryst -lboost_python311 resolve_distutils_target(["install"], ["build/fast-3.11/_pyobjcryst.so"]) Mkdir("build/lib.linux-x86_64-cpython-311/pyobjcryst") Copy("build/lib.linux-x86_64-cpython-311/pyobjcryst/_pyobjcryst.cpython-311-x86_64-linux-gnu.so", "build/fast-3.11/_pyobjcryst.so") Touch("build/lib.linux-x86_64-cpython-311/pyobjcryst/_pyobjcryst.cpython-311-x86_64-linux-gnu.so") /usr/bin/python3.11 setup.py install --install-layout=deb --prefix=debian/pyobjcryst /build/reproducible-path/pyobjcryst-2.2.5/setup.py:19: DeprecationWarning: `numpy.distutils` is deprecated since NumPy 1.23.0, as a result of the deprecation of `distutils` itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to use `setuptools < 60.0` for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.html from numpy.distutils.misc_util import get_numpy_include_dirs running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` and ``easy_install``. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://github.com/pypa/setuptools/issues/917 for details. ******************************************************************************** !! self.initialize_options() Checking .pth file support in debian/pyobjcryst/lib/python3/dist-packages/ /usr/bin/python3.11 -E -c pass TEST FAILED: debian/pyobjcryst/lib/python3/dist-packages/ does NOT support .pth files bad install directory or PYTHONPATH You are attempting to install a package to a directory that is not on PYTHONPATH and which Python does not read ".pth" files from. The installation directory you specified (via --install-dir, --prefix, or the distutils default setting) was: debian/pyobjcryst/lib/python3/dist-packages/ and your PYTHONPATH environment variable currently contains: '' Here are some of your options for correcting the problem: * You can choose a different installation directory, i.e., one that is on PYTHONPATH or supports .pth files * You can add the installation directory to the PYTHONPATH environment variable. (It must then also be on PYTHONPATH whenever you run Python and want to use the package(s) you are installing.) * You can set up the installation directory to support ".pth" files by using one of the approaches described here: https://setuptools.pypa.io/en/latest/deprecated/easy_install.html#custom-installation-locations Please make the appropriate changes for your system and try again. running bdist_egg running egg_info writing src/pyobjcryst.egg-info/PKG-INFO writing dependency_links to src/pyobjcryst.egg-info/dependency_links.txt writing requirements to src/pyobjcryst.egg-info/requires.txt writing top-level names to src/pyobjcryst.egg-info/top_level.txt reading manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'src' warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitarchive.cfg' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files found matching 'setup.cfg' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.travis*' no previously-included directories found matching 'conda-recipe' no previously-included directories found matching 'devutils' no previously-included directories found matching 'doc' adding license file 'LICENSE.txt' adding license file 'LICENSE_DANSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'src/pyobjcryst.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py copying src/pyobjcryst/fourier.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/scatterer.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/io.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/version.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/lsq.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/radiation.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/unitcell.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/general.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/polyhedron.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/spacegroup.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/powderpattern.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/globaloptim.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/indexing.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/utils.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/diffractiondatasinglecrystal.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/globals.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/__init__.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/molecule.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/atom.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/scatteringpower.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/scatteringpowersphere.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/scatteringdata.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/reflectionprofile.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/refinableobj.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/crystal.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst copying src/pyobjcryst/zscatterer.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst creating build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/debug.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testindexing.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testlsq.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testrefinableobj.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testradiation.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testcrystal.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testglobaloptim.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testspacegroup.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testclocks.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttest.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testutils.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/run.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testpowderpattern.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/__init__.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/pyobjcrysttestutils.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testconverters.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testmolecule.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests copying src/pyobjcryst/tests/testcif.py -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyobjcryst.tests.testdata' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'pyobjcryst.tests.testdata' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'pyobjcryst.tests.testdata' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'pyobjcryst.tests.testdata' to be distributed and are already explicitly excluding 'pyobjcryst.tests.testdata' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying src/pyobjcryst/version.cfg -> build/lib.linux-x86_64-cpython-311/pyobjcryst creating build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ag_silver.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/BaTiO3.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CaTiO3.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/CeO2.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/NaCl.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Ni.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbS_galena.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/PbTe.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Si_setting2.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/caffeine.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/cime.fhz -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/ni.stru -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata copying src/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata running build_ext creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/fourier.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/scatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/io.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/version.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/lsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/radiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/unitcell.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/general.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/polyhedron.py -> build/bdist.linux-x86_64/egg/pyobjcryst creating build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/debug.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testindexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testlsq.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testrefinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testradiation.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests creating build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/PbTe.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/NaCl.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/Ag_silver.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/ni.stru -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/CdSe_cadmoselite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/lidocainementhol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/paracetamol_monomethanolate.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/ZnS_sphalerite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/TiO2_rutile.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/CaF2_fluorite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/Si.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/ZnS_wurtzite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/PbS_galena.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/Si_setting2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/CeO2.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/Ni.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/paracetamol.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/TiO2_anatase.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/cime.fhz -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/BaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/caffeine.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/paracetamol_monomethanolate_data_single_crystal.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/CaTiO3.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/C_graphite_hex.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/Zn_zinc.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testdata/SrTiO3_tausonite.cif -> build/bdist.linux-x86_64/egg/pyobjcryst/tests/testdata copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testcrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testglobaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testspacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testclocks.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/pyobjcrysttest.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/run.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testpowderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/pyobjcrysttestutils.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testconverters.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testmolecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/tests/testcif.py -> build/bdist.linux-x86_64/egg/pyobjcryst/tests copying build/lib.linux-x86_64-cpython-311/pyobjcryst/spacegroup.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/powderpattern.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/globaloptim.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/indexing.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/utils.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/diffractiondatasinglecrystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/globals.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/__init__.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/molecule.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/atom.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/scatteringpower.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/scatteringpowersphere.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/version.cfg -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/scatteringdata.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/reflectionprofile.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/refinableobj.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/crystal.py -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/_pyobjcryst.cpython-311-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/egg/pyobjcryst copying build/lib.linux-x86_64-cpython-311/pyobjcryst/zscatterer.py -> build/bdist.linux-x86_64/egg/pyobjcryst byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/fourier.py to fourier.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatterer.py to scatterer.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/io.py to io.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/version.py to version.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/lsq.py to lsq.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/radiation.py to radiation.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/unitcell.py to unitcell.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/general.py to general.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/polyhedron.py to polyhedron.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/debug.py to debug.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testindexing.py to testindexing.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testlsq.py to testlsq.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testrefinableobj.py to testrefinableobj.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testradiation.py to testradiation.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcrystal.py to testcrystal.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testglobaloptim.py to testglobaloptim.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testspacegroup.py to testspacegroup.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testclocks.py to testclocks.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttest.py to pyobjcrysttest.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testutils.py to testutils.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/run.py to run.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testpowderpattern.py to testpowderpattern.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/__init__.py to __init__.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/pyobjcrysttestutils.py to pyobjcrysttestutils.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testconverters.py to testconverters.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testmolecule.py to testmolecule.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/tests/testcif.py to testcif.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/spacegroup.py to spacegroup.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/powderpattern.py to powderpattern.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globaloptim.py to globaloptim.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/indexing.py to indexing.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/utils.py to utils.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/diffractiondatasinglecrystal.py to diffractiondatasinglecrystal.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/globals.py to globals.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/__init__.py to __init__.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/molecule.py to molecule.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/atom.py to atom.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpower.py to scatteringpower.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringpowersphere.py to scatteringpowersphere.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/scatteringdata.py to scatteringdata.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/reflectionprofile.py to reflectionprofile.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/refinableobj.py to refinableobj.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/crystal.py to crystal.cpython-311.pyc byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/zscatterer.py to zscatterer.cpython-311.pyc creating stub loader for pyobjcryst/_pyobjcryst.cpython-311-x86_64-linux-gnu.so byte-compiling build/bdist.linux-x86_64/egg/pyobjcryst/_pyobjcryst.py to _pyobjcryst.cpython-311.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/not-zip-safe -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying src/pyobjcryst.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt creating 'dist/pyobjcryst-2.2.5-py3.11-linux-x86_64.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing pyobjcryst-2.2.5-py3.11-linux-x86_64.egg creating /build/reproducible-path/pyobjcryst-2.2.5/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2.2.5-py3.11-linux-x86_64.egg Extracting pyobjcryst-2.2.5-py3.11-linux-x86_64.egg to /build/reproducible-path/pyobjcryst-2.2.5/debian/pyobjcryst/lib/python3/dist-packages Installed /build/reproducible-path/pyobjcryst-2.2.5/debian/pyobjcryst/lib/python3/dist-packages/pyobjcryst-2.2.5-py3.11-linux-x86_64.egg Processing dependencies for pyobjcryst==2.2.5 Searching for numpy==1.26.4 Best match: numpy 1.26.4 Installing f2py script to debian/pyobjcryst/bin Installing f2py3 script to debian/pyobjcryst/bin Installing f2py3.12 script to debian/pyobjcryst/bin Installing f2py3.11 script to debian/pyobjcryst/bin Using /usr/lib/python3/dist-packages Finished processing dependencies for pyobjcryst==2.2.5 scons: done building targets. dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dwz: debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-311-x86_64-linux-gnu.so: .debug_info section not present dwz: debian/python3-pyobjcryst/usr/lib/python3/dist-packages/pyobjcryst/_pyobjcryst.cpython-312-x86_64-linux-gnu.so: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_numpy3 -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-pyobjcryst' in '../python3-pyobjcryst_2.2.5-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../pyobjcryst_2.2.5-1_amd64.buildinfo dpkg-genchanges --build=binary -O../pyobjcryst_2.2.5-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from pyobjcryst-2.2.5/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2415928/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2415928 and its subdirectories I: Current time: Wed Jul 9 09:08:17 +14 2025 I: pbuilder-time-stamp: 1752001697