I: pbuilder: network access will be disabled during build I: Current time: Sat Jul 24 12:11:44 +14 2021 I: pbuilder-time-stamp: 1627078304 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [meep-mpi-default_1.17.1-2.dsc] I: copying [./meep-mpi-default_1.17.1.orig.tar.gz] I: copying [./meep-mpi-default_1.17.1-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.sU4_Zn9h/trustedkeys.kbx': General error gpgv: Signature made Wed Feb 3 13:10:09 2021 +14 gpgv: using RSA key 6201FBFFDBBDE07822EABB9696FCAC0D387B5847 gpgv: issuer "debian@alteholz.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./meep-mpi-default_1.17.1-2.dsc dpkg-source: info: extracting meep-mpi-default in meep-mpi-default-1.17.1 dpkg-source: info: unpacking meep-mpi-default_1.17.1.orig.tar.gz dpkg-source: info: unpacking meep-mpi-default_1.17.1-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/14541/tmp/hooks/D01_modify_environment starting debug: Running on virt32c. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/14541/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/14541/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=4' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=d694ee81733046cf913b4aa990abd00d LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=14541 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.1ilAUPw42X/pbuilderrc_e686 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.1ilAUPw42X/b2 --logfile b2/build.log --extrapackages usrmerge meep-mpi-default_1.17.1-2.dsc' SUDO_GID=113 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:8000/ I: uname -a Linux i-capture-the-hostname 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-1 (2021-06-24) armv7l GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 22 16:26 bash -rwxr-xr-x 3 root root 26052 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 23 2020 cat -rwxr-xr-x 1 root root 43104 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 23 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 23 2020 chown -rwxr-xr-x 1 root root 92616 Sep 23 2020 cp -rwxr-xr-x 1 root root 75524 Dec 11 2020 dash -rwxr-xr-x 1 root root 75880 Sep 23 2020 date -rwxr-xr-x 1 root root 55436 Sep 23 2020 dd -rwxr-xr-x 1 root root 59912 Sep 23 2020 df -rwxr-xr-x 1 root root 96764 Sep 23 2020 dir -rwxr-xr-x 1 root root 55012 Feb 8 04:38 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 8 04:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 27 06:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 3 13:30 gzip -rwxr-xr-x 1 root root 13784 Nov 8 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 23 2020 ln -rwxr-xr-x 1 root root 35068 Feb 8 2020 login -rwxr-xr-x 1 root root 96764 Sep 23 2020 ls -rwxr-xr-x 1 root root 99940 Feb 8 04:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 23 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 8 04:38 more -rwsr-xr-x 1 root root 34400 Feb 8 04:38 mount -rwxr-xr-x 1 root root 9824 Feb 8 04:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Jun 22 16:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 23 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 23 2020 rm -rwxr-xr-x 1 root root 30732 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Jul 24 12:12 sh -> bash lrwxrwxrwx 1 root root 4 Jul 22 23:24 sh.distrib -> dash -rwxr-xr-x 1 root root 22532 Sep 23 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 23 2020 stty -rwsr-xr-x 1 root root 46704 Feb 8 04:38 su -rwxr-xr-x 1 root root 22532 Sep 23 2020 sync -rwxr-xr-x 1 root root 340872 Feb 17 23:55 tar -rwxr-xr-x 1 root root 9808 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 23 2020 touch -rwxr-xr-x 1 root root 22496 Sep 23 2020 true -rwxr-xr-x 1 root root 9636 Feb 27 06:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 8 04:38 umount -rwxr-xr-x 1 root root 22520 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 23 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 8 04:38 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew I: user script /srv/workspace/pbuilder/14541/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: gfortran, debhelper-compat (= 12), libctl-dev (>= 4.5.0-8), pkg-config, libharminv-dev (>= 1.4.1), zlib1g-dev, libfftw3-dev, libhdf5-mpi-dev, libgsl-dev, liblapack-dev, mpi-default-dev, libblas-dev, chrpath, dpkg-dev (>= 1.16.1~), swig, python3-dev, python3-numpy, python3-h5py, mpi-default-bin, libgdsii-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libctl-dev (>= 4.5.0-8); however: Package libctl-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libharminv-dev (>= 1.4.1); however: Package libharminv-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-mpi-dev; however: Package libhdf5-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on swig; however: Package swig is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-bin; however: Package mpi-default-bin is not installed. pbuilder-satisfydepends-dummy depends on libgdsii-dev; however: Package libgdsii-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} guile-2.2{a} guile-2.2-dev{a} guile-2.2-libs{a} guile-3.0-libs{a} ibverbs-providers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libbsd0{a} libcbor0{a} libctl-dev{a} libctl7{a} libdebhelper-perl{a} libedit2{a} libelf1{a} libevent-2.1-7{a} libevent-core-2.1-7{a} libevent-dev{a} libevent-extra-2.1-7{a} libevent-openssl-2.1-7{a} libevent-pthreads-2.1-7{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgc-dev{a} libgc1{a} libgdsii-dev{a} libgdsii0{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgsl-dev{a} libgsl25{a} libgslcblas0{a} libharminv-dev{a} libharminv3{a} libhdf5-103-1{a} libhdf5-hl-100{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103-1{a} libhdf5-openmpi-cpp-103-1{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102{a} libhdf5-openmpi-hl-100{a} libhdf5-openmpi-hl-cpp-100{a} libhdf5-openmpi-hl-fortran-100{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack-dev{a} liblapack3{a} libltdl-dev{a} libltdl7{a} liblzf1{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmpdec3{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpipeline1{a} libpmix-dev{a} libpmix2{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} librdmacm1{a} libreadline-dev{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} po-debconf{a} python3{a} python3-dev{a} python3-distutils{a} python3-h5py{a} python3-h5py-serial{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3-six{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} swig{a} swig4.0{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libcoarrays-openmpi-dev libctl-doc libglib2.0-data libgpm2 libmail-sendmail-perl lynx shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 161 newly installed, 0 to remove and 0 not upgraded. Need to get 81.2 MB of archives. After unpacking 334 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf libpython3.9-minimal armhf 3.9.2-1 [790 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf python3.9-minimal armhf 3.9.2-1 [1630 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libmpdec3 armhf 2.5.1-1 [74.9 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf libreadline8 armhf 8.1-1 [147 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf libpython3.9-stdlib armhf 3.9.2-1 [1608 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf python3.9 armhf 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf python3 armhf 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf libmd0 armhf 1.0.3-3 [27.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libbsd0 armhf 0.11.3-1 [103 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf libedit2 armhf 3.1-20191231-2+b1 [81.1 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libcbor0 armhf 0.5.0+dfsg-2 [19.6 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libfido2-1 armhf 1.6.0-2 [48.0 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf openssh-client armhf 1:8.4p1-5 [842 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf chrpath armhf 0.16-2+b1 [15.9 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf libgfortran5 armhf 10.2.1-6 [237 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf libgfortran-10-dev armhf 10.2.1-6 [289 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf gfortran-10 armhf 10.2.1-6 [7123 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf gfortran armhf 4:10.2.1-1 [1424 B] Get: 55 http://deb.debian.org/debian bullseye/main armhf libgc1 armhf 1:8.0.4-3 [227 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf libltdl7 armhf 2.4.6-15 [388 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf guile-2.2-libs armhf 2.2.7+1-6 [4933 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf guile-2.2 armhf 2.2.7+1-6 [22.0 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf libncurses6 armhf 6.2+20201114-2 [80.5 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf libncurses-dev armhf 6.2+20201114-2 [308 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf libncurses5-dev armhf 6.2+20201114-2 [936 B] Get: 62 http://deb.debian.org/debian bullseye/main armhf libreadline-dev armhf 8.1-1 [135 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf libltdl-dev armhf 2.4.6-15 [159 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf libgmpxx4ldbl armhf 2:6.2.1+dfsg-1 [336 kB] Get: 65 http://deb.debian.org/debian bullseye/main armhf libgmp-dev armhf 2:6.2.1+dfsg-1 [593 kB] Get: 66 http://deb.debian.org/debian bullseye/main armhf libgc-dev armhf 1:8.0.4-3 [394 kB] Get: 67 http://deb.debian.org/debian bullseye/main armhf libglib2.0-0 armhf 2.66.8-1 [1206 kB] Get: 68 http://deb.debian.org/debian bullseye/main armhf pkg-config armhf 0.29.2-1 [62.4 kB] Get: 69 http://deb.debian.org/debian bullseye/main armhf guile-2.2-dev armhf 2.2.7+1-6 [571 kB] Get: 70 http://deb.debian.org/debian bullseye/main armhf guile-3.0-libs armhf 3.0.5-4 [6256 kB] Get: 71 http://deb.debian.org/debian bullseye/main armhf libnl-3-200 armhf 3.4.0-1+b1 [55.5 kB] Get: 72 http://deb.debian.org/debian bullseye/main armhf libnl-route-3-200 armhf 3.4.0-1+b1 [136 kB] Get: 73 http://deb.debian.org/debian bullseye/main armhf libibverbs1 armhf 33.2-1 [53.0 kB] Get: 74 http://deb.debian.org/debian bullseye/main armhf ibverbs-providers armhf 33.2-1 [25.4 kB] Get: 75 http://deb.debian.org/debian bullseye/main armhf libaec0 armhf 1.0.4-1 [20.4 kB] Get: 76 http://deb.debian.org/debian bullseye/main armhf libsz2 armhf 1.0.4-1 [6616 B] Get: 77 http://deb.debian.org/debian bullseye/main armhf libaec-dev armhf 1.0.4-1 [18.3 kB] Get: 78 http://deb.debian.org/debian bullseye/main armhf libblas3 armhf 3.9.0-3 [109 kB] Get: 79 http://deb.debian.org/debian bullseye/main armhf libblas-dev armhf 3.9.0-3 [118 kB] Get: 80 http://deb.debian.org/debian bullseye/main armhf libctl7 armhf 4.5.0-9 [107 kB] Get: 81 http://deb.debian.org/debian bullseye/main armhf libctl-dev armhf 4.5.0-9 [95.1 kB] Get: 82 http://deb.debian.org/debian bullseye/main armhf libevent-2.1-7 armhf 2.1.12-stable-1 [169 kB] Get: 83 http://deb.debian.org/debian bullseye/main armhf libevent-core-2.1-7 armhf 2.1.12-stable-1 [127 kB] Get: 84 http://deb.debian.org/debian bullseye/main armhf libevent-extra-2.1-7 armhf 2.1.12-stable-1 [101 kB] Get: 85 http://deb.debian.org/debian bullseye/main armhf libevent-pthreads-2.1-7 armhf 2.1.12-stable-1 [56.8 kB] Get: 86 http://deb.debian.org/debian bullseye/main armhf libevent-openssl-2.1-7 armhf 2.1.12-stable-1 [61.6 kB] Get: 87 http://deb.debian.org/debian bullseye/main armhf libevent-dev armhf 2.1.12-stable-1 [296 kB] Get: 88 http://deb.debian.org/debian bullseye/main armhf libexpat1-dev armhf 2.2.10-2 [123 kB] Get: 89 http://deb.debian.org/debian bullseye/main armhf librdmacm1 armhf 33.2-1 [60.8 kB] Get: 90 http://deb.debian.org/debian bullseye/main armhf libfabric1 armhf 1.11.0-2 [319 kB] Get: 91 http://deb.debian.org/debian bullseye/main armhf libfftw3-double3 armhf 3.3.8-2 [432 kB] Get: 92 http://deb.debian.org/debian bullseye/main armhf libfftw3-single3 armhf 3.3.8-2 [715 kB] Get: 93 http://deb.debian.org/debian bullseye/main armhf libfftw3-bin armhf 3.3.8-2 [43.5 kB] Get: 94 http://deb.debian.org/debian bullseye/main armhf libfftw3-dev armhf 3.3.8-2 [1141 kB] Get: 95 http://deb.debian.org/debian bullseye/main armhf libgdsii0 armhf 0.2+ds.1-1 [25.8 kB] Get: 96 http://deb.debian.org/debian bullseye/main armhf libgdsii-dev armhf 0.2+ds.1-1 [30.8 kB] Get: 97 http://deb.debian.org/debian bullseye/main armhf libgslcblas0 armhf 2.6+dfsg-2 [80.0 kB] Get: 98 http://deb.debian.org/debian bullseye/main armhf libgsl25 armhf 2.6+dfsg-2 [769 kB] Get: 99 http://deb.debian.org/debian bullseye/main armhf libgsl-dev armhf 2.6+dfsg-2 [963 kB] Get: 100 http://deb.debian.org/debian bullseye/main armhf liblapack3 armhf 3.9.0-3 [1651 kB] Get: 101 http://deb.debian.org/debian bullseye/main armhf libharminv3 armhf 1.4.1-2 [12.5 kB] Get: 102 http://deb.debian.org/debian bullseye/main armhf libharminv-dev armhf 1.4.1-2 [4916 B] Get: 103 http://deb.debian.org/debian bullseye/main armhf libhdf5-103-1 armhf 1.10.6+repack-4 [1178 kB] Get: 104 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-100 armhf 1.10.6+repack-4 [80.5 kB] Get: 105 http://deb.debian.org/debian bullseye/main armhf libhwloc15 armhf 2.4.1+dfsg-1 [125 kB] Get: 106 http://deb.debian.org/debian bullseye/main armhf libpciaccess0 armhf 0.16-1 [51.0 kB] Get: 107 http://deb.debian.org/debian bullseye/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 108 http://deb.debian.org/debian bullseye/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 109 http://deb.debian.org/debian bullseye/main armhf libxcb1 armhf 1.14-3 [136 kB] Get: 110 http://deb.debian.org/debian bullseye/main armhf libx11-data all 2:1.7.1-1 [310 kB] Get: 111 http://deb.debian.org/debian bullseye/main armhf libx11-6 armhf 2:1.7.1-1 [712 kB] Get: 112 http://deb.debian.org/debian bullseye/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB] Get: 113 http://deb.debian.org/debian bullseye/main armhf libxnvctrl0 armhf 460.73.01-1 [25.8 kB] Get: 114 http://deb.debian.org/debian bullseye/main armhf ocl-icd-libopencl1 armhf 2.2.14-2 [39.7 kB] Get: 115 http://deb.debian.org/debian bullseye/main armhf libhwloc-plugins armhf 2.4.1+dfsg-1 [19.7 kB] Get: 116 http://deb.debian.org/debian bullseye/main armhf libpmix2 armhf 4.0.0-4 [487 kB] Get: 117 http://deb.debian.org/debian bullseye/main armhf libopenmpi3 armhf 4.1.0-10 [1831 kB] Get: 118 http://deb.debian.org/debian bullseye/main armhf libhdf5-openmpi-103-1 armhf 1.10.6+repack-4 [1225 kB] Get: 119 http://deb.debian.org/debian bullseye/main armhf libhdf5-openmpi-fortran-102 armhf 1.10.6+repack-4 [94.2 kB] Get: 120 http://deb.debian.org/debian bullseye/main armhf libhdf5-openmpi-hl-100 armhf 1.10.6+repack-4 [80.2 kB] Get: 121 http://deb.debian.org/debian bullseye/main armhf libhdf5-openmpi-hl-fortran-100 armhf 1.10.6+repack-4 [51.1 kB] Get: 122 http://deb.debian.org/debian bullseye/main armhf libhdf5-openmpi-cpp-103-1 armhf 1.10.6+repack-4 [133 kB] Get: 123 http://deb.debian.org/debian bullseye/main armhf libhdf5-openmpi-hl-cpp-100 armhf 1.10.6+repack-4 [37.4 kB] Get: 124 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get: 125 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [123 kB] Get: 126 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo-dev armhf 1:2.0.6-4 [242 kB] Get: 127 http://deb.debian.org/debian bullseye/main armhf libjpeg-dev armhf 1:2.0.6-4 [67.8 kB] Get: 128 http://deb.debian.org/debian bullseye/main armhf openmpi-common all 4.1.0-10 [179 kB] Get: 129 http://deb.debian.org/debian bullseye/main armhf libnl-3-dev armhf 3.4.0-1+b1 [97.1 kB] Get: 130 http://deb.debian.org/debian bullseye/main armhf libnl-route-3-dev armhf 3.4.0-1+b1 [160 kB] Get: 131 http://deb.debian.org/debian bullseye/main armhf libibverbs-dev armhf 33.2-1 [183 kB] Get: 132 http://deb.debian.org/debian bullseye/main armhf libnuma1 armhf 2.0.12-1+b1 [22.7 kB] Get: 133 http://deb.debian.org/debian bullseye/main armhf libnuma-dev armhf 2.0.12-1+b1 [37.0 kB] Get: 134 http://deb.debian.org/debian bullseye/main armhf libhwloc-dev armhf 2.4.1+dfsg-1 [208 kB] Get: 135 http://deb.debian.org/debian bullseye/main armhf libpmix-dev armhf 4.0.0-4 [617 kB] Get: 136 http://deb.debian.org/debian bullseye/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 137 http://deb.debian.org/debian bullseye/main armhf libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 138 http://deb.debian.org/debian bullseye/main armhf openmpi-bin armhf 4.1.0-10 [206 kB] Get: 139 http://deb.debian.org/debian bullseye/main armhf libopenmpi-dev armhf 4.1.0-10 [1143 kB] Get: 140 http://deb.debian.org/debian bullseye/main armhf libhdf5-openmpi-dev armhf 1.10.6+repack-4 [2517 kB] Get: 141 http://deb.debian.org/debian bullseye/main armhf mpi-default-dev armhf 1.13 [5476 B] Get: 142 http://deb.debian.org/debian bullseye/main armhf libhdf5-mpi-dev armhf 1.10.6+repack-4 [32.5 kB] Get: 143 http://deb.debian.org/debian bullseye/main armhf libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 144 http://deb.debian.org/debian bullseye/main armhf libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 145 http://deb.debian.org/debian bullseye/main armhf liblapack-dev armhf 3.9.0-3 [1719 kB] Get: 146 http://deb.debian.org/debian bullseye/main armhf liblzf1 armhf 3.6-3 [9248 B] Get: 147 http://deb.debian.org/debian bullseye/main armhf libpython3.9 armhf 3.9.2-1 [1447 kB] Get: 148 http://deb.debian.org/debian bullseye/main armhf libpython3.9-dev armhf 3.9.2-1 [3160 kB] Get: 149 http://deb.debian.org/debian bullseye/main armhf libpython3-dev armhf 3.9.2-3 [21.7 kB] Get: 150 http://deb.debian.org/debian bullseye/main armhf mpi-default-bin armhf 1.13 [4672 B] Get: 151 http://deb.debian.org/debian bullseye/main armhf python3.9-dev armhf 3.9.2-1 [515 kB] Get: 152 http://deb.debian.org/debian bullseye/main armhf python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 153 http://deb.debian.org/debian bullseye/main armhf python3-distutils all 3.9.2-1 [143 kB] Get: 154 http://deb.debian.org/debian bullseye/main armhf python3-dev armhf 3.9.2-3 [24.8 kB] Get: 155 http://deb.debian.org/debian bullseye/main armhf python3-pkg-resources all 52.0.0-4 [190 kB] Get: 156 http://deb.debian.org/debian bullseye/main armhf python3-numpy armhf 1:1.19.5-1 [2981 kB] Get: 157 http://deb.debian.org/debian bullseye/main armhf python3-six all 1.16.0-1 [17.1 kB] Get: 158 http://deb.debian.org/debian bullseye/main armhf python3-h5py-serial armhf 2.10.0-9+b2 [598 kB] Get: 159 http://deb.debian.org/debian bullseye/main armhf python3-h5py all 2.10.0-9 [11.4 kB] Get: 160 http://deb.debian.org/debian bullseye/main armhf swig4.0 armhf 4.0.2-1 [1327 kB] Get: 161 http://deb.debian.org/debian bullseye/main armhf swig all 4.0.2-1 [330 kB] Fetched 81.2 MB in 7s (11.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../1-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../3-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libpython3.9-minimal:armhf. Preparing to unpack .../5-libpython3.9-minimal_3.9.2-1_armhf.deb ... Unpacking libpython3.9-minimal:armhf (3.9.2-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../6-libexpat1_2.2.10-2_armhf.deb ... Unpacking libexpat1:armhf (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../7-python3.9-minimal_3.9.2-1_armhf.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:armhf (3.9.2-1) ... Setting up libexpat1:armhf (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20265 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_armhf.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:armhf. Preparing to unpack .../2-libmpdec3_2.5.1-1_armhf.deb ... Unpacking libmpdec3:armhf (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:armhf. Preparing to unpack .../4-libreadline8_8.1-1_armhf.deb ... Unpacking libreadline8:armhf (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:armhf. Preparing to unpack .../5-libpython3.9-stdlib_3.9.2-1_armhf.deb ... Unpacking libpython3.9-stdlib:armhf (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../6-python3.9_3.9.2-1_armhf.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../7-libpython3-stdlib_3.9.2-3_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20686 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_armhf.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../003-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.39-3_armhf.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-4_armhf.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libmd0:armhf. Preparing to unpack .../006-libmd0_1.0.3-3_armhf.deb ... Unpacking libmd0:armhf (1.0.3-3) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../007-libbsd0_0.11.3-1_armhf.deb ... Unpacking libbsd0:armhf (0.11.3-1) ... Selecting previously unselected package libedit2:armhf. Preparing to unpack .../008-libedit2_3.1-20191231-2+b1_armhf.deb ... Unpacking libedit2:armhf (3.1-20191231-2+b1) ... Selecting previously unselected package libcbor0:armhf. Preparing to unpack .../009-libcbor0_0.5.0+dfsg-2_armhf.deb ... Unpacking libcbor0:armhf (0.5.0+dfsg-2) ... Selecting previously unselected package libfido2-1:armhf. Preparing to unpack .../010-libfido2-1_1.6.0-2_armhf.deb ... Unpacking libfido2-1:armhf (1.6.0-2) ... Selecting previously unselected package openssh-client. Preparing to unpack .../011-openssh-client_1%3a8.4p1-5_armhf.deb ... Unpacking openssh-client (1:8.4p1-5) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../012-libsigsegv2_2.13-1_armhf.deb ... Unpacking libsigsegv2:armhf (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.18-5_armhf.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... 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Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:armhf (67.1-7) ... Setting up libgslcblas0:armhf (2.6+dfsg-2) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libgsl25:armhf (2.6+dfsg-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.66.8-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.3.4) ... Setting up libcbor0:armhf (0.5.0+dfsg-2) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libaec0:armhf (1.0.4-1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:armhf (3.9.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libgmpxx4ldbl:armhf (2:6.2.1+dfsg-1) ... Setting up libexpat1-dev:armhf (2.2.10-2) ... Setting up libjpeg62-turbo:armhf (1:2.0.6-4) ... Setting up libx11-data (2:1.7.1-1) ... Setting up libjpeg62-turbo-dev:armhf (1:2.0.6-4) ... Setting up libncurses6:armhf (6.2+20201114-2) ... Setting up liblzf1:armhf (3.6-3) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up libhwloc15:armhf (2.4.1+dfsg-1) ... Setting up libevent-core-2.1-7:armhf (2.1.12-stable-1) ... Setting up libevent-2.1-7:armhf (2.1.12-stable-1) ... Setting up autopoint (0.21-4) ... Setting up pkg-config (0.29.2-1) ... Setting up libgc1:armhf (1:8.0.4-3) ... Setting up libltdl7:armhf (2.4.6-15) ... Setting up libfftw3-double3:armhf (3.3.8-2) ... Setting up libgfortran5:armhf (10.2.1-6) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up libnuma1:armhf (2.0.12-1+b1) ... Setting up libmd0:armhf (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up ocl-icd-libopencl1:armhf (2.2.14-2) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libnl-3-200:armhf (3.4.0-1+b1) ... Setting up libmpdec3:armhf (2.5.1-1) ... Setting up openmpi-common (4.1.0-10) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgfortran-10-dev:armhf (10.2.1-6) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up swig4.0 (4.0.2-1) ... Setting up libfido2-1:armhf (1.6.0-2) ... Setting up libgc-dev:armhf (1:8.0.4-3) ... Setting up libbsd0:armhf (0.11.3-1) ... Setting up libgdsii0:armhf (0.2+ds.1-1) ... Setting up libelf1:armhf (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up chrpath (0.16-2+b1) ... Setting up libblas-dev:armhf (3.9.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libsz2:armhf (1.0.4-1) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libevent-pthreads-2.1-7:armhf (2.1.12-stable-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libevent-extra-2.1-7:armhf (2.1.12-stable-1) ... Setting up liblapack3:armhf (3.9.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libncurses-dev:armhf (6.2+20201114-2) ... Setting up libxcb1:armhf (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libgsl-dev (2.6+dfsg-2) ... Setting up swig (4.0.2-1) ... Setting up libgmp-dev:armhf (2:6.2.1+dfsg-1) ... Setting up libtool (2.4.6-15) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libgdsii-dev:armhf (0.2+ds.1-1) ... Setting up libedit2:armhf (3.1-20191231-2+b1) ... Setting up libreadline8:armhf (8.1-1) ... Setting up libaec-dev:armhf (1.0.4-1) ... Setting up libjpeg-dev:armhf (1:2.0.6-4) ... Setting up libevent-openssl-2.1-7:armhf (2.1.12-stable-1) ... Setting up m4 (1.4.18-5) ... Setting up libreadline-dev:armhf (8.1-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnuma-dev:armhf (2.0.12-1+b1) ... Setting up libnl-route-3-200:armhf (3.4.0-1+b1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libevent-dev (2.1.12-stable-1) ... Setting up liblapack-dev:armhf (3.9.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up gfortran-10 (10.2.1-6) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up libharminv3 (1.4.1-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libhdf5-103-1:armhf (1.10.6+repack-4) ... Setting up dwz (0.13+20210201-1) ... Setting up libnl-3-dev:armhf (3.4.0-1+b1) ... Setting up groff-base (1.22.4-6) ... Setting up libncurses5-dev:armhf (6.2+20201114-2) ... Setting up libx11-6:armhf (2:1.7.1-1) ... Setting up libharminv-dev (1.4.1-2) ... Setting up libfftw3-dev:armhf (3.3.8-2) ... Setting up guile-2.2-libs:armhf (2.2.7+1-6) ... Setting up libpython3.9-stdlib:armhf (3.9.2-1) ... Setting up libpython3-stdlib:armhf (3.9.2-3) ... Setting up libhdf5-hl-100:armhf (1.10.6+repack-4) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libibverbs1:armhf (33.2-1) ... Setting up guile-2.2 (2.2.7+1-6) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/guile/2.2/bin/guile to provide /usr/bin/guile (guile) in auto mode Setting up ibverbs-providers:armhf (33.2-1) ... Setting up guile-3.0-libs:armhf (3.0.5-4) ... Setting up openssh-client (1:8.4p1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:armhf (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxnvctrl0:armhf (460.73.01-1) ... Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:armhf (3.4.0-1+b1) ... Setting up libltdl-dev:armhf (2.4.6-15) ... Setting up libctl7:armhf (4.5.0-9) ... Setting up guile-2.2-dev (2.2.7+1-6) ... update-alternatives: using /usr/bin/guile-config-2.2 to provide /usr/bin/guile-config (guile-config) in auto mode update-alternatives: using /usr/share/aclocal/guile-2.2.m4 to provide /usr/share/aclocal/guile.m4 (guile-autoconf-macros) in auto mode Setting up libpython3.9:armhf (3.9.2-1) ... Setting up libhwloc-dev:armhf (2.4.1+dfsg-1) ... Setting up python3.9 (3.9.2-1) ... Setting up librdmacm1:armhf (33.2-1) ... Setting up libpython3.9-dev:armhf (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up libibverbs-dev:armhf (33.2-1) ... Setting up libhwloc-plugins:armhf (2.4.1+dfsg-1) ... Setting up libctl-dev:armhf (4.5.0-9) ... Setting up python3-six (1.16.0-1) ... Setting up python3.9-dev (3.9.2-1) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-distutils (3.9.2-1) ... Setting up libfabric1 (1.11.0-2) ... Setting up libpython3-dev:armhf (3.9.2-3) ... Setting up libpmix2:armhf (4.0.0-4) ... Setting up libopenmpi3:armhf (4.1.0-10) ... Setting up python3-dev (3.9.2-3) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up libpmix-dev:armhf (4.0.0-4) ... Setting up openmpi-bin (4.1.0-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libhdf5-openmpi-103-1:armhf (1.10.6+repack-4) ... Setting up mpi-default-bin (1.13) ... Setting up python3-h5py-serial (2.10.0-9+b2) ... Setting up libhdf5-openmpi-fortran-102:armhf (1.10.6+repack-4) ... Setting up python3-h5py (2.10.0-9) ... Setting up libhdf5-openmpi-hl-100:armhf (1.10.6+repack-4) ... Setting up libopenmpi-dev:armhf (4.1.0-10) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Setting up libhdf5-openmpi-cpp-103-1:armhf (1.10.6+repack-4) ... Setting up libhdf5-openmpi-hl-cpp-100:armhf (1.10.6+repack-4) ... Setting up libhdf5-openmpi-hl-fortran-100:armhf (1.10.6+repack-4) ... Setting up mpi-default-dev (1.13) ... Setting up libhdf5-openmpi-dev (1.10.6+repack-4) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-mpi.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libhdf5-mpi-dev (1.10.6+repack-4) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). The following additional packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl The following NEW packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 59.5 kB of archives. After this operation, 157 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main armhf libnumber-compare-perl all 0.03-1.1 [6956 B] Get:2 http://deb.debian.org/debian bullseye/main armhf libtext-glob-perl all 0.11-1 [8888 B] Get:3 http://deb.debian.org/debian bullseye/main armhf libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:4 http://deb.debian.org/debian bullseye/main armhf usrmerge all 25 [13.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 59.5 kB in 0s (125 kB/s) Selecting previously unselected package libnumber-compare-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 29774 files and directories currently installed.) Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... Unpacking libnumber-compare-perl (0.03-1.1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package usrmerge. Preparing to unpack .../archives/usrmerge_25_all.deb ... Unpacking usrmerge (25) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libnumber-compare-perl (0.03-1.1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up usrmerge (25) ... The system has been successfully converted. Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. I: Building the package hostname: Name or service not known I: Running cd /build/meep-mpi-default-1.17.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../meep-mpi-default_1.17.1-2_source.changes dpkg-buildpackage: info: source package meep-mpi-default dpkg-buildpackage: info: source version 1.17.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Thorsten Alteholz dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/build/meep-mpi-default-1.17.1' # we do not need this anymore rm -f tests/latest_output dh_clean make[1]: Leaving directory '/build/meep-mpi-default-1.17.1' debian/rules build dh build --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:24: installing './compile' configure.ac:68: installing './config.guess' configure.ac:68: installing './config.sub' configure.ac:12: installing './install-sh' configure.ac:12: installing './missing' libpympb/Makefile.am: installing './depcomp' python/Makefile.am:213: installing './py-compile' parallel-tests: installing './test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/meep-mpi-default-1.17.1' F77=gfortran dh_auto_configure -- --host=arm-linux-gnueabihf --build=arm-linux-gnueabihf --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --with-mpi=yes --enable-maintainer-mode ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf --build=arm-linux-gnueabihf --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --with-mpi=yes --enable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-gcc... none checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking dependency style of arm-linux-gnueabihf-g++... none checking for mpic++... mpic++ checking for MPI_Init... yes checking for mpi.h... yes checking for extra flag needed to combine stdio.h and mpi.h... none checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking for C++ compiler vendor... gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by arm-linux-gnueabihf-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabihf-nm -B checking the name lister (/usr/bin/arm-linux-gnueabihf-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for arm-linux-gnueabihf-objdump... arm-linux-gnueabihf-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabihf-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabihf-ar... arm-linux-gnueabihf-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking command to parse /usr/bin/arm-linux-gnueabihf-nm -B output from arm-linux-gnueabihf-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for arm-linux-gnueabihf-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... arm-linux-gnueabihf-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabihf-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabihf-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabihf-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabihf-gcc static flag -static works... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... yes checking if arm-linux-gnueabihf-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabihf-gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpic++ -E checking for ld used by mpic++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the mpic++ linker (/usr/bin/ld) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for latex2html... no configure: WARNING: Cannot find latex2html in your path! checking for sin in -lm... yes checking for fftw_plan_dft_1d in -lfftw3... yes checking for arm-linux-gnueabihf-g77... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sgemm_... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_... (cached) no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for pkg-config... /usr/bin/pkg-config checking for harminv >= 1.1... yes checking HARMINV_CFLAGS... checking HARMINV_LIBS... -lharminv checking mpb.h usability... no checking mpb.h presence... no checking for mpb.h... no checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_sf_bessel_Jn in -lgsl... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... yes checking for mpirun... mpirun checking for guile-config... guile-config checking if linking to guile works... yes checking libguile.h usability... yes checking libguile.h presence... yes checking for libguile.h... yes checking guile/gh.h usability... no checking guile/gh.h presence... no checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for SCM_SMOB_PREDICATE... no checking for SCM_SMOB_DATA... no checking for SCM_NEWSMOB... no checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking ctl.h usability... yes checking ctl.h presence... yes checking for ctl.h... yes checking whether libctl version is at least 4.2.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking libGDSII.h usability... yes checking libGDSII.h presence... yes checking for libGDSII.h... yes checking for libGDSIIExists in -lGDSII... yes checking for libGDSII::GetLayers... no checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes checking whether to catch and ignore SIGFPE signals... yes checking whether time.h and sys/time.h may both be included... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for cblas_ddot... yes checking for cblas_daxpy... yes checking for jn... yes checking for C/C++ restrict keyword... __restrict checking for swig... swig checking for python... no checking for python2... no checking for python3... /usr/bin/python3 checking for python version... 3.9 checking for python platform... linux checking for python script directory... ${prefix}/lib/python3.9/site-packages checking for python extension module directory... ${exec_prefix}/lib/python3.9/site-packages checking for Python include directory... /usr/include/python3.9 checking Python.h usability... yes checking Python.h presence... yes checking for Python.h... yes checking for Numpy include directory... /usr/lib/python3/dist-packages/numpy/core/include checking for numpy/arrayobject.h... yes checking for coverage module... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating scheme/Makefile config.status: creating scheme/meep.scm config.status: creating libpympb/Makefile config.status: creating python/Makefile config.status: creating Makefile config.status: creating meep-pkgconfig config.status: creating src/Makefile config.status: creating src/support/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/meep-mpi-default-1.17.1' dh_auto_build make -j4 make[1]: Entering directory '/build/meep-mpi-default-1.17.1' make all-recursive make[2]: Entering directory '/build/meep-mpi-default-1.17.1' Making all in src make[3]: Entering directory '/build/meep-mpi-default-1.17.1/src' make sphere_quad (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; sed 's/LOOP_OVER/S1LOOP_OVER/g' ../src/step_generic.cpp | sed 's/step_curl/step_curl_stride1/' | sed 's/step_update_EDHB/step_update_EDHB_stride1/' | sed 's/step_beta/step_beta_stride1/') > step_generic_stride1.cpp make[4]: Entering directory '/build/meep-mpi-default-1.17.1/src' make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sphere-quad.o sphere-quad.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/src' (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../src/sphere_quad) > sphere-quad.h make all-recursive make[4]: Entering directory '/build/meep-mpi-default-1.17.1/src' Making all in support make[5]: Entering directory '/build/meep-mpi-default-1.17.1/src/support' /bin/sh ../../libtool --tag=CC --mode=compile arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mt19937ar.lo mt19937ar.c libtool: compile: arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -c mt19937ar.c -fPIC -DPIC -o .libs/mt19937ar.o libtool: compile: arm-linux-gnueabihf-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -c mt19937ar.c -fPIC -DPIC -o mt19937ar.o >/dev/null 2>&1 /bin/sh ../../libtool --tag=CC --mode=link arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o libsupport.la mt19937ar.lo -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: arm-linux-gnueabihf-ar cr .libs/libsupport.a .libs/mt19937ar.o libtool: link: arm-linux-gnueabihf-ranlib .libs/libsupport.a libtool: link: ( cd ".libs" && rm -f "libsupport.la" && ln -s "../libsupport.la" "libsupport.la" ) make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/src/support' make[5]: Entering directory '/build/meep-mpi-default-1.17.1/src' /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array_slice.lo array_slice.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o anisotropic_averaging.lo anisotropic_averaging.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bands.lo bands.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o boundaries.lo boundaries.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o .libs/boundaries.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o .libs/bands.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o .libs/array_slice.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o .libs/anisotropic_averaging.o anisotropic_averaging.cpp: In function 'meep::vec meep::sphere_pt(const meep::vec&, double, int, double&)': anisotropic_averaging.cpp:39:19: warning: control reaches end of non-void function [-Wreturn-type] 39 | default: abort("unknown dimensions in sphere_pt\n"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ boundaries.cpp: In member function 'meep::ivec meep::fields::ilattice_vector(meep::direction) const': boundaries.cpp:69:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 69 | switch (d) { | ^~~~~~ boundaries.cpp:77:5: note: here 77 | case D3: | ^~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o bands.o >/dev/null 2>&1 In file included from meep.hpp:24, from boundaries.cpp:21: meep/vec.hpp: In member function 'bool meep::fields::locate_component_point(meep::component*, meep::ivec*, std::complex*) const': meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bicgstab.lo bicgstab.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o .libs/bicgstab.o In file included from /usr/include/c++/10/vector:72, from meep/vec.hpp:23, from meep.hpp:24, from meep_internals.hpp:19, from array_slice.cpp:27: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector meep::fields::get_array_metadata(const meep::volume&)': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from meep/vec.hpp:23, from meep.hpp:24, from meep_internals.hpp:19, from array_slice.cpp:27: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o array_slice.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o bicgstab.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o boundaries.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o anisotropic_averaging.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o casimir.lo casimir.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o .libs/casimir.o In file included from meep.hpp:24, from casimir.cpp:29: meep/vec.hpp: In member function 'std::complex meep::fields::casimir_stress_dct_integral(meep::direction, meep::direction, double, double, double, meep::field_type, meep::volume, bool)': meep/vec.hpp:430:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 430 | case Z: return (component)(start_point + 4); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cw_fields.lo cw_fields.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o .libs/cw_fields.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o casimir.o >/dev/null 2>&1 In file included from meep.hpp:24, from meep_internals.hpp:19, from cw_fields.cpp:18: meep/vec.hpp: In function 'void meep::array_to_fields(const std::complex*, meep::fields&)': meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft.lo dft.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft.cpp -fPIC -DPIC -o .libs/dft.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft_ldos.lo dft_ldos.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o .libs/dft_ldos.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o energy_and_flux.lo energy_and_flux.cpp meep/vec.hpp: In function 'void meep::fields_to_array(const meep::fields&, std::complex*)': meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o .libs/energy_and_flux.o dft.cpp: In member function 'cdouble meep::dft_chunk::process_dft_component(int, meep::direction*, meep::ivec, meep::ivec, int, meep::h5file*, double*, int, cdouble*, void*, void*, int, bool, meep::fields*)': dft.cpp:749:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] 749 | if ((num_freq < 0) || (num_freq > omega.size()-1)) | ~~~~~~~~~^~~~~~~~~~~~~~~~ dft.cpp:750:108: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] 750 | abort("process_dft_component: frequency index %d is outside the range of the frequency array of size %lu",num_freq,omega.size()); | ~~^ ~~~~~~~~~~~~ | | | | long unsigned int std::vector::size_type {aka unsigned int} | %u dft.cpp: In member function 'void meep::fields::output_dft_components(meep::dft_chunk**, int, meep::volume, const char*)': dft.cpp:1151:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 1151 | if (!real_array) abort("%s:%i:out of memory(%lu)", __FILE__, __LINE__, array_size); | ~~^ ~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u meep/vec.hpp: In member function 'bool meep::fields::solve_cw(double, int, std::complex, int, std::complex*, double, int)': meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o cw_fields.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o dft_ldos.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o energy_and_flux.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fields.lo fields.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields.cpp -fPIC -DPIC -o .libs/fields.o dft.cpp: In member function 'void meep::fields::get_overlap(void*, void*, meep::dft_flux, int, cdouble*)': dft.cpp:1246:57: warning: '*((void*)& cH +4)' may be used uninitialized in this function [-Wmaybe-uninitialized] 1246 | mode2_data, cE[1]); | ^ dft.cpp:1244:57: warning: 'cH' may be used uninitialized in this function [-Wmaybe-uninitialized] 1244 | mode2_data, cE[0]); | ^ dft.cpp:1246:57: warning: '*((void*)& cE +4)' may be used uninitialized in this function [-Wmaybe-uninitialized] 1246 | mode2_data, cE[1]); | ^ dft.cpp:1244:57: warning: 'cE' may be used uninitialized in this function [-Wmaybe-uninitialized] 1244 | mode2_data, cE[0]); | ^ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o loop_in_chunks.lo loop_in_chunks.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o .libs/loop_in_chunks.o fields.cpp: In member function 'meep::volume meep::fields::total_volume() const': fields.cpp:639:31: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 639 | v = v | S.transform(gv0, n); | ^ In file included from meep.hpp:24, from fields.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ loop_in_chunks.cpp: In member function 'void meep::fields::loop_in_chunks(meep::field_chunkloop, void*, const meep::volume&, meep::component, bool, bool)': loop_in_chunks.cpp:425:44: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 425 | vS = S.transform(chunks[i]->v, sn); | ^ In file included from meep.hpp:24, from loop_in_chunks.cpp:22: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ loop_in_chunks.cpp:434:82: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 434 | chunks[i]->gv.loc(Centered, chunks[i]->gv.ntot() - 1) + pad); | ^ In file included from meep.hpp:24, from loop_in_chunks.cpp:22: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5fields.lo h5fields.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft.cpp -fPIC -DPIC -o dft.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5fields.cpp -fPIC -DPIC -o .libs/h5fields.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields.cpp -fPIC -DPIC -o fields.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o loop_in_chunks.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5fields.cpp -fPIC -DPIC -o h5fields.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5file.lo h5file.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5file.cpp -fPIC -DPIC -o .libs/h5file.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5file.cpp -fPIC -DPIC -o h5file.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o initialize.lo initialize.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c initialize.cpp -fPIC -DPIC -o .libs/initialize.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate.lo integrate.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate.cpp -fPIC -DPIC -o .libs/integrate.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate2.lo integrate2.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o .libs/integrate2.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o monitor.lo monitor.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o .libs/monitor.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c initialize.cpp -fPIC -DPIC -o initialize.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate.cpp -fPIC -DPIC -o integrate.o >/dev/null 2>&1 monitor.cpp: In member function 'double meep::fields::get_field(meep::derived_component, const meep::vec&, bool) const': monitor.cpp:123:19: warning: control reaches end of non-void function [-Wreturn-type] 123 | default: abort("unknown derived_component in get_field"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ monitor.cpp: In member function 'std::complex meep::structure_chunk::get_chi1inv_at_pt(meep::component, meep::direction, int, double) const': monitor.cpp:325:19: warning: 'comp_list[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] 325 | component cc = comp_list[com_it]; | ^~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o integrate2.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o monitor.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mympi.lo mympi.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o .libs/mympi.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o multilevel-atom.lo multilevel-atom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o .libs/multilevel-atom.o multilevel-atom.cpp: In member function 'virtual void* meep::multilevel_susceptibility::new_internal_data(meep::realnum* (*)[2], const meep::grid_volume&) const': multilevel-atom.cpp:138:47: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 138 | if (d == NULL) abort("%s:%i:out of memory(%lu)", __FILE__, __LINE__, sz); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u In file included from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2887, from mympi.cpp:32: /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ mympi.cpp: In function 'void meep::abort(const char*, ...)': mympi.cpp:124:12: warning: ignoring return value of 'int vasprintf(char**, const char*, __gnuc_va_list)' declared with attribute 'warn_unused_result' [-Wunused-result] 124 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ mympi.cpp: In function 'void meep::_do_master_printf(FILE*, meep::meep_printf_callback_func, const char*, va_list)': mympi.cpp:596:16: warning: ignoring return value of 'int vasprintf(char**, const char*, __gnuc_va_list)' declared with attribute 'warn_unused_result' [-Wunused-result] 596 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o near2far.lo near2far.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o .libs/near2far.o In file included from meep.hpp:24, from multilevel-atom.cpp:22: meep/vec.hpp: In member function 'virtual void meep::multilevel_susceptibility::subtract_P(meep::field_type, meep::realnum* (*)[2], void*) const': meep/vec.hpp:430:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 430 | case Z: return (component)(start_point + 4); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o output_directory.lo output_directory.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o .libs/output_directory.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o mympi.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o multilevel-atom.o >/dev/null 2>&1 near2far.cpp: In member function 'meep::dft_near2far meep::fields::add_dft_near2far(const meep::volume_list*, const double*, size_t, int)': near2far.cpp:569:38: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 569 | everywhere = everywhere | where->v; | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from near2far.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ output_directory.cpp: In function 'const char* meep::make_output_directory(const char*, const char*)': output_directory.cpp:117:35: warning: '-out' directive output may be truncated writing 4 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 117 | snprintf(outdirname, buflen, "%s-out", basename); | ^~~~ In file included from /usr/include/stdio.h:867, from output_directory.cpp:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 304 bytes into a destination of size 300 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ output_directory.cpp:126:36: warning: '%s' directive output may be truncated writing up to 299 bytes into a region of size between 0 and 299 [-Wformat-truncation=] 126 | snprintf(outsrcname, buflen, "%s/%s", outdirname, sourcename); | ^~ ~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from output_directory.cpp:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 2 and 600 bytes into a destination of size 300 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ output_directory.cpp:122:39: warning: '-out-' directive output may be truncated writing 5 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 122 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~ output_directory.cpp:122:36: note: directive argument in the range [0, 2147483647] 122 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from output_directory.cpp:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 7 and 315 bytes into a destination of size 300 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o output_directory.o >/dev/null 2>&1 meep/vec.hpp: In function 'void meep::greencyl(std::complex*, const meep::vec&, double, double, double, const meep::vec&, meep::component, std::complex, double, double)': meep/vec.hpp:429:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 429 | case Y: return (component)(start_point + 1); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o random.lo random.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o .libs/random.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sources.lo sources.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o .libs/sources.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step.lo step.cpp near2far.cpp: In member function 'meep::dft_near2far meep::fields::add_dft_near2far(const meep::volume_list*, const double*, size_t, int)': near2far.cpp:626:42: warning: 'fd[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] 626 | component c = direction_component(i == 0 ? Ex : Hx, fd[j]); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o .libs/step.o In file included from /usr/include/c++/10/vector:72, from meep/vec.hpp:23, from meep.hpp:24, from meep_internals.hpp:19, from near2far.cpp:23: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::complex&}; _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o random.o >/dev/null 2>&1 In file included from /usr/include/c++/10/vector:67, from meep/vec.hpp:23, from meep.hpp:24, from meep_internals.hpp:19, from near2far.cpp:23: /usr/include/c++/10/bits/stl_vector.h: In member function 'std::vector meep::dft_near2far::near_sourcedata(const meep::vec&, double*, size_t, std::complex*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ sources.cpp: In function 'std::complex meep::gaussianbeam_ampfunc(const meep::vec&)': sources.cpp:490:1: warning: control reaches end of non-void function [-Wreturn-type] 490 | } | ^ In file included from meep.hpp:24, from step.cpp:22: meep/vec.hpp: In member function 'void meep::fields_chunk::step_source(meep::field_type, bool)': meep/vec.hpp:430:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 430 | case Z: return (component)(start_point + 4); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o near2far.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o step.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_db.lo step_db.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o .libs/step_db.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o sources.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o stress.lo stress.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o .libs/stress.o In file included from meep.hpp:24, from step_db.cpp:23: meep/vec.hpp: In member function 'bool meep::fields_chunk::step_db(meep::field_type)': meep/vec.hpp:429:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 429 | case Y: return (component)(start_point + 1); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ In file included from stress.cpp:21: ./meep.hpp: In constructor 'meep::dft_force::dft_force(meep::dft_chunk*, meep::dft_chunk*, meep::dft_chunk*, const double*, size_t, const meep::volume&)': ./meep.hpp:1194:10: warning: 'meep::dft_force::where' will be initialized after [-Wreorder] 1194 | volume where; | ^~~~~ ./meep.hpp:1192:23: warning: 'std::vector meep::dft_force::freq' [-Wreorder] 1192 | std::vector freq; | ^~~~ stress.cpp:47:1: warning: when initialized here [-Wreorder] 47 | dft_force::dft_force(dft_chunk *offdiag1_, dft_chunk *offdiag2_, dft_chunk *diag_, | ^~~~~~~~~ stress.cpp: In member function 'meep::dft_force meep::fields::add_dft_force(const meep::volume_list*, const double*, size_t)': stress.cpp:182:38: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 182 | everywhere = everywhere | where->v; | ^ In file included from ./meep.hpp:24, from stress.cpp:21: ./meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o step_db.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o stress.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure.lo structure.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure.cpp -fPIC -DPIC -o .libs/structure.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure_dump.lo structure_dump.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o .libs/structure_dump.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o susceptibility.lo susceptibility.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o .libs/susceptibility.o structure.cpp: In member function 'void meep::structure::choose_chunkdivision(const meep::grid_volume&, int, const meep::boundary_region&, const meep::symmetry&)': structure.cpp:130:23: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 130 | v = gv.surroundings(); | ^ In file included from meep.hpp:24, from structure.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ structure.cpp: In function 'std::vector meep::choose_chunkdivision(meep::grid_volume&, meep::volume&, int, const meep::symmetry&)': structure.cpp:207:25: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 207 | v = gv.surroundings(); | ^ In file included from meep.hpp:24, from structure.cpp:23: meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o time.lo time.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o .libs/time.o susceptibility.cpp: In member function 'virtual void* meep::lorentzian_susceptibility::new_internal_data(meep::realnum* (*)[2], const meep::grid_volume&) const': susceptibility.cpp:116:47: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 116 | if (d == NULL) abort("%s:%i:out of memory(%lu)", __FILE__, __LINE__, sz); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u susceptibility.cpp: In member function 'virtual void* meep::gyrotropic_susceptibility::new_internal_data(meep::realnum* (*)[2], const meep::grid_volume&) const': susceptibility.cpp:389:47: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 389 | if (d == NULL) abort("%s:%i:out of memory(%lu)", __FILE__, __LINE__, sz); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u structure_dump.cpp: In member function 'void meep::structure::dump(const char*)': structure_dump.cpp:275:46: warning: '_' directive output may be truncated writing 1 byte into a region of size between 0 and 9 [-Wformat-truncation=] 275 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^ structure_dump.cpp:275:31: note: using the range [-2147483648, 2147483647] for directive argument 275 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from structure_dump.cpp:21: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 14 and 43 bytes into a destination of size 20 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ structure_dump.cpp: In member function 'void meep::structure::load(const char*)': structure_dump.cpp:644:44: warning: '%d' directive output may be truncated writing between 1 and 2 bytes into a region of size between 1 and 10 [-Wformat-truncation=] 644 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~ structure_dump.cpp:644:31: note: directive argument in the range [0, 19] 644 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ structure_dump.cpp:644:31: note: directive argument in the range [0, 4] In file included from /usr/include/stdio.h:867, from structure_dump.cpp:21: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 14 and 24 bytes into a destination of size 20 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from meep.hpp:24, from susceptibility.cpp:31: meep/vec.hpp: In member function 'virtual void meep::lorentzian_susceptibility::subtract_P(meep::field_type, meep::realnum* (*)[2], void*) const': meep/vec.hpp:430:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 430 | case Z: return (component)(start_point + 4); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from meep/vec.hpp:23, from meep.hpp:24, from structure_dump.cpp:26: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const meep::grid_volume&}; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ meep/vec.hpp: In member function 'virtual void meep::gyrotropic_susceptibility::subtract_P(meep::field_type, meep::realnum* (*)[2], void*) const': meep/vec.hpp:430:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 430 | case Z: return (component)(start_point + 4); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o time.o >/dev/null 2>&1 In file included from /usr/include/c++/10/vector:67, from meep/vec.hpp:23, from meep.hpp:24, from structure_dump.cpp:26: /usr/include/c++/10/bits/stl_vector.h: In member function 'void meep::structure::load_chunk_layout(const char*, meep::boundary_region&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ meep/vec.hpp: In member function 'virtual bool meep::susceptibility::needs_W_notowned(meep::component, meep::realnum* (*)[2]) const': meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o structure_dump.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_eh.lo update_eh.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o .libs/update_eh.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o susceptibility.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mpb.lo mpb.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o .libs/mpb.o In file included from meep.hpp:24, from update_eh.cpp:20: meep/vec.hpp: In member function 'bool meep::fields_chunk::update_eh(meep::field_type, bool)': meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:429:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 429 | case Y: return (component)(start_point + 1); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:431:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 431 | case R: return (component)(start_point + 2); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep/vec.hpp:430:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 430 | case Z: return (component)(start_point + 4); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o update_eh.o >/dev/null 2>&1 mpb.cpp: In member function 'void* meep::fields::get_eigenmode(double, meep::direction, meep::volume, meep::volume, int, const meep::vec&, bool, int, double, double, double*, void**, meep::diffractedplanewave*)': mpb.cpp:986:1: warning: no return statement in function returning non-void [-Wreturn-type] 986 | } | ^ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o mpb.o >/dev/null 2>&1 In file included from /usr/include/c++/10/vector:72, from meep/vec.hpp:23, from meep.hpp:24, from structure.cpp:23: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const meep::grid_volume&}; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from meep/vec.hpp:23, from meep.hpp:24, from structure.cpp:23: /usr/include/c++/10/bits/stl_vector.h: In function 'void meep::split_by_cost(std::vector, meep::grid_volume, std::vector&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'std::vector meep::structure::get_chunk_volumes() const': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'std::vector meep::choose_chunkdivision(meep::grid_volume&, meep::volume&, int, const meep::symmetry&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_pols.lo update_pols.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure.cpp -fPIC -DPIC -o structure.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o .libs/update_pols.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o vec.lo vec.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o .libs/vec.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic.lo step_generic.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o .libs/step_generic.o vec.cpp: In member function 'size_t meep::grid_volume::surface_area() const': vec.cpp:866:14: warning: statement has no effect [-Wunused-value] 866 | case D1: 2; | ^ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o update_pols.o >/dev/null 2>&1 vec.cpp: In member function 'meep::signed_direction meep::symmetry::transform(meep::direction, int) const': vec.cpp:1367:27: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 1367 | if (nme == 1) sd = S[d]; | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ vec.cpp:1369:43: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 1369 | sd = flip(transform(S[d].d, nme - 1)); | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ vec.cpp:1371:37: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 1371 | sd = transform(S[d].d, nme - 1); | ^ In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ vec.cpp: In member function 'double meep::grid_volume::boundary_location(meep::boundary_side, meep::direction) const': vec.cpp:712:20: warning: this statement may fall through [-Wimplicit-fallthrough=] 712 | case P: abort("P has no boundary!\n"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ vec.cpp:713:7: note: here 713 | case NO_DIRECTION: abort("NO_DIRECTION has no boundary!\n"); | ^~~~ vec.cpp:725:20: warning: this statement may fall through [-Wimplicit-fallthrough=] 725 | case P: abort("P has no boundary!\n"); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ vec.cpp:726:7: note: here 726 | case NO_DIRECTION: abort("NO_DIRECTION has no boundary!\n"); | ^~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meepgeom.lo meepgeom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o .libs/meepgeom.o meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient(meep::realnum*, size_t, std::complex*, std::complex*, meep::realnum*, size_t, meep::realnum, const meep::volume&, geom_box_tree, meep::fields*)': meepgeom.cpp:2475:9: warning: unused variable 'rank' [-Wunused-variable] 2475 | int rank = f->get_array_slice_dimensions(where, &dims[3 * c], dirs, true, false, min_max_loc, | ^~~~ meepgeom.cpp:2496:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 2496 | for (int i1 = 0; i1 < nf; ++i1) { // freq | ~~~^~~~ meepgeom.cpp:2497:22: warning: unused variable 'v_cur' [-Wunused-variable] 2497 | meep::realnum *v_cur = &v[ng * i1]; | ^~~~~ meepgeom.cpp: In function 'meep::vec meep_geom::vector3_to_vec(vector3)': meepgeom.cpp:254:25: warning: control reaches end of non-void function [-Wreturn-type] 254 | default: meep::abort("unknown dimensionality in vector3_to_vec"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meepgeom.cpp: In function 'double meep_geom::vec_to_value(vector3, vector3, int)': meepgeom.cpp:2227:1: warning: control reaches end of non-void function [-Wreturn-type] 2227 | } | ^ meepgeom.cpp: In function 'std::complex meep_geom::cvec_to_value(vector3, cvector3, int)': meepgeom.cpp:2212:1: warning: control reaches end of non-void function [-Wreturn-type] 2212 | } | ^ meepgeom.cpp: At global scope: meepgeom.cpp:2190:13: warning: 'void meep_geom::print_tensor(std::complex*)' defined but not used [-Wunused-function] 2190 | static void print_tensor(std::complex *in) { | ^~~~~~~~~~~~ In file included from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: meep/vec.hpp: In member function 'meep::component meep::symmetry::transform(meep::component, int) const': meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from meep/vec.hpp:23, from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const meep::grid_volume&}; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {meep::grid_volume}; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector meep::grid_volume::split_into_n(int) const': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from meep/vec.hpp:23, from meep.hpp:24, from meep_internals.hpp:19, from vec.cpp:23: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o vec.o >/dev/null 2>&1 meepgeom.cpp: In function 'meep::realnum meep_geom::get_material_gradient(meep::realnum, std::complex, std::complex, meep::realnum, meep_geom::material_data*, meep::component, meep::realnum)': meepgeom.cpp:2314:62: warning: 'dir_idx' may be used uninitialized in this function [-Wmaybe-uninitialized] 2314 | std::complex result = fields_a * dA_du[3 * dir_idx + dir_idx] * fields_f; | ~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from meepgeom.cpp:17: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const meep_geom::absorber&}; _Tp = meep_geom::absorber; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from meepgeom.cpp:17: /usr/include/c++/10/bits/stl_vector.h: In function 'void meep_geom::add_absorbing_layer(meep_geom::absorber_list, double, int, int, double, double, meep::pml_profile_func, void*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o meepgeom.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o step_generic.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o GDSIIgeom.lo GDSIIgeom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o .libs/GDSIIgeom.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o GDSIIgeom.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic_stride1.lo step_generic_stride1.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o .libs/step_generic_stride1.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o step_generic_stride1.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 23:1:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o libmeep.la -rpath /usr/lib/arm-linux-gnueabihf array_slice.lo anisotropic_averaging.lo bands.lo boundaries.lo bicgstab.lo casimir.lo cw_fields.lo dft.lo dft_ldos.lo energy_and_flux.lo fields.lo loop_in_chunks.lo h5fields.lo h5file.lo initialize.lo integrate.lo integrate2.lo monitor.lo mympi.lo multilevel-atom.lo near2far.lo output_directory.lo random.lo sources.lo step.lo step_db.lo stress.lo structure.lo structure_dump.lo susceptibility.lo time.lo update_eh.lo mpb.lo update_pols.lo vec.lo step_generic.lo meepgeom.lo GDSIIgeom.lo step_generic_stride1.lo support/libsupport.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o .libs/array_slice.o .libs/anisotropic_averaging.o .libs/bands.o .libs/boundaries.o .libs/bicgstab.o .libs/casimir.o .libs/cw_fields.o .libs/dft.o .libs/dft_ldos.o .libs/energy_and_flux.o .libs/fields.o .libs/loop_in_chunks.o .libs/h5fields.o .libs/h5file.o .libs/initialize.o .libs/integrate.o .libs/integrate2.o .libs/monitor.o .libs/mympi.o .libs/multilevel-atom.o .libs/near2far.o .libs/output_directory.o .libs/random.o .libs/sources.o .libs/step.o .libs/step_db.o .libs/stress.o .libs/structure.o .libs/structure_dump.o .libs/susceptibility.o .libs/time.o .libs/update_eh.o .libs/mpb.o .libs/update_pols.o .libs/vec.o .libs/step_generic.o .libs/meepgeom.o .libs/GDSIIgeom.o .libs/step_generic_stride1.o -Wl,--whole-archive support/.libs/libsupport.a -Wl,--no-whole-archive -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -lfftw3 -lgfortran -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -Wl,-soname -Wl,libmeep.so.23 -o .libs/libmeep.so.23.0.1 libtool: link: (cd ".libs" && rm -f "libmeep.so.23" && ln -s "libmeep.so.23.0.1" "libmeep.so.23") libtool: link: (cd ".libs" && rm -f "libmeep.so" && ln -s "libmeep.so.23.0.1" "libmeep.so") libtool: link: (cd .libs/libmeep.lax/libsupport.a && arm-linux-gnueabihf-ar x "/build/meep-mpi-default-1.17.1/src/support/.libs/libsupport.a") libtool: link: arm-linux-gnueabihf-ar cr .libs/libmeep.a array_slice.o anisotropic_averaging.o bands.o boundaries.o bicgstab.o casimir.o cw_fields.o dft.o dft_ldos.o energy_and_flux.o fields.o loop_in_chunks.o h5fields.o h5file.o initialize.o integrate.o integrate2.o monitor.o mympi.o multilevel-atom.o near2far.o output_directory.o random.o sources.o step.o step_db.o stress.o structure.o structure_dump.o susceptibility.o time.o update_eh.o mpb.o update_pols.o vec.o step_generic.o meepgeom.o GDSIIgeom.o step_generic_stride1.o .libs/libmeep.lax/libsupport.a/mt19937ar.o libtool: link: arm-linux-gnueabihf-ranlib .libs/libmeep.a libtool: link: rm -fr .libs/libmeep.lax libtool: link: ( cd ".libs" && rm -f "libmeep.la" && ln -s "../libmeep.la" "libmeep.la" ) make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/src' make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/src' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/src' Making all in tests make[3]: Entering directory '/build/meep-mpi-default-1.17.1/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/tests' Making all in scheme make[3]: Entering directory '/build/meep-mpi-default-1.17.1/scheme' gen-ctl-io --cxx --header -o ctl-io.h meep.scm /usr/share/libctl gen-ctl-io --cxx --swig -o ctl-io.i meep.scm /usr/share/libctl (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; perl -pe 's/^ *class +([A-Za-z_0-9:]*)( *| *:[^{]*){.*$/%rename(meep_\1) meep::\1;/' ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | grep "%rename" | sort -u; echo; grep -hv typedef ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/(inline|const|extern|static) +//g' | perl -pe 's/^[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%rename(meep_\1) meep::\1;/' | grep "%rename" | sort -u; ) > meep_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; for f in ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp; do egrep "^enum" $f | perl -pe 's/enum +([A-Za-z_0-9:]+).*$/\1/g' | while read enum; do cat $f | tr -d '\n' | perl -pe 's/.*enum +'${enum}' *{([^}]*)}.*/\1/g' | perl -pe 's/= *[0-9]+//g' |tr -d ' \t' | tr ',' '\n' | perl -pe 's/^(.*)$/'"%rename(meep_${enum}_\1) meep::\1;/g"; echo; done; done;) > meep_enum_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; grep -h friend ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/^ *friend +[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%ignore \1;/' | grep "%ignore" | sort -u;) > meep_swig_bug_workaround.i (perl -pe 's/%rename\(([A-Za-z0-9_]*)\) *([A-Za-z0-9:_]*);$/(define \2 (\1))/' meep_enum_renames.i | perl -pe 's/[A-Za-z0-9:_]*:://g' | perl -pe 's/_/-/g' | perl -pe 's,//,;,'; echo "(define Centered Dielectric)") > meep-enums.scm ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" swig -I../src -c++ -guile -o meep_wrap.cxx ./meep.i cp -f /usr/share/libctl/base/main.c main.cpp cp -f /usr/share/libctl/utils/geom.c geom.cpp gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" patch -p0 meep_wrap.cxx < ./meep_wrap.patch patching file meep_wrap.cxx Hunk #1 succeeded at 798 (offset 47 lines). sed -i.bak '/(SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob))/ s/swig_collectable_tag, smob)/swig_collectable_tag, smob) || SCM_SMOB_PREDICATE((swig_collectable_tag \& ~0xff00), (smob))/' meep_wrap.cxx; make all-am make[4]: Entering directory '/build/meep-mpi-default-1.17.1/scheme' mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-meep.o `test -f 'meep.cpp' || echo './'`meep.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-structure.o `test -f 'structure.cpp' || echo './'`structure.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-meep_wrap.o `test -f 'meep_wrap.cxx' || echo './'`meep_wrap.cxx mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-main.o `test -f 'main.cpp' || echo './'`main.cpp In file included from ctl-io.h:7, from main.cpp:37: main.cpp: In function 'void main_entry(void*, int, char**)': main.cpp:194:31: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:202:44: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:205:45: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-geom.o `test -f 'geom.cpp' || echo './'`geom.cpp geom.cpp:22: warning: "_GNU_SOURCE" redefined 22 | #define _GNU_SOURCE | : note: this is the location of the previous definition geom.cpp: In function 'vector3 normal_to_prism(ctlio::prism*, vector3)': geom.cpp:2357:11: warning: variable 'axisp' set but not used [-Wunused-but-set-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ structure.cpp: In function 'meep::vec vector3_to_vec(vector3)': structure.cpp:148:25: warning: control reaches end of non-void function [-Wreturn-type] 148 | default: meep::abort("unknown dimensionality in vector3_to_vec"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.17.1, Copyright (C) 2005-2021 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-ctl-io.o `test -f 'ctl-io.cpp' || echo './'`ctl-io.cpp meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_flip(SCM)': meep_wrap.cxx:2857:13: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 2857 | arg1 = *argp1; | ^~~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep_wrap.cxx:2859:27: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 2859 | result = meep::flip(arg1); | ^ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_symmetry_transform__SWIG_0(int, scm_unused_struct**)': meep_wrap.cxx:10569:63: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 10569 | result = ((meep::symmetry const *)arg1)->transform(arg2,arg3); | ^ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ In file included from ctl-io.h:7, from ctl-io.cpp:7: ctl-io.cpp: In function 'void ctlio::export_external_functions()': ctl-io.cpp:2229:38: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2229 | gh_new_procedure("square-basis-aux", (SCM (*)()) square_basis_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2230:51: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2230 | gh_new_procedure("range-overlap-with-object-aux", (SCM (*)()) range_overlap_with_object_aux, 5, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2231:55: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2231 | gh_new_procedure("display-geometric-object-info-aux", (SCM (*)()) display_geometric_object_info_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2232:51: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2232 | gh_new_procedure("point-in-periodic-object?-aux", (SCM (*)()) point_in_periodic_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2233:42: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2233 | gh_new_procedure("normal-to-object-aux", (SCM (*)()) normal_to_object_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2234:42: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2234 | gh_new_procedure("point-in-object?-aux", (SCM (*)()) point_in_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_volume_list_v_set(SCM, SCM)': meep_wrap.cxx:11678:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 11678 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_structure_chunk_v_set(SCM, SCM)': meep_wrap.cxx:20561:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 20561 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_structure_v_set(SCM, SCM)': meep_wrap.cxx:23197:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 23197 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ structure.cpp: In member function 'virtual void geom_epsilon::eff_chi1inv_row(meep::component, double*, const meep::volume&, double, int)': structure.cpp:580:10: warning: 'mat1' may be used uninitialized in this function [-Wmaybe-uninitialized] 580 | mat2 = mat1; | ~~~~~^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_0(int, scm_unused_struct**)': meep_wrap.cxx:33250:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33250 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:33253:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33253 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_1(int, scm_unused_struct**)': meep_wrap.cxx:33310:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33310 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:33313:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33313 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_2(int, scm_unused_struct**)': meep_wrap.cxx:33365:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33365 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:33368:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 33368 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_flux_where_set(SCM, SCM)': meep_wrap.cxx:34591:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 34591 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_energy_where_set(SCM, SCM)': meep_wrap.cxx:36086:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 36086 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_force_where_set(SCM, SCM)': meep_wrap.cxx:37357:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 37357 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_near2far_where_set(SCM, SCM)': meep_wrap.cxx:39150:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 39150 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_dft_fields_where_set(SCM, SCM)': meep_wrap.cxx:40132:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 40132 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_fields_chunk_v_set(SCM, SCM)': meep_wrap.cxx:41700:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 41700 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_meep_fields_v_set(SCM, SCM)': meep_wrap.cxx:44472:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 44472 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from ../src/meep.hpp:24, from meep-ctl.hpp:5, from meep_wrap.cxx:1454: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ ../src/meep/vec.hpp: In function 'scm_unused_struct* _wrap_meep_field_type_component(SCM, SCM)': ../src/meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp: In function 'scm_unused_struct* _wrap_meep_cycle_component(SCM, SCM, SCM)': ../src/meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp: In function 'scm_unused_struct* _wrap_meep_direction_component(SCM)': ../src/meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/libmeep.la -lctl -lguile-2.2 -lgc -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/.libs/libmeep.so -lctl -lguile-2.2 -lgc -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/scheme' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/scheme' Making all in python make[3]: Entering directory '/build/meep-mpi-default-1.17.1/python' swig -Wextra -I../src -I../libpympb -I.. -outdir . -c++ -nofastunpack -python -o meep-python.cxx ./meep.i cp meep.py __init__.py echo "__version__ = '1.17.1'" >> __init__.py if [[ "4.0.2" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi make all-am make[4]: Entering directory '/build/meep-mpi-default-1.17.1/python' /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o _meep_la-meep-python.lo `test -f 'meep-python.cxx' || echo './'`meep-python.cxx libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cxx -fPIC -DPIC -o .libs/_meep_la-meep-python.o In file included from meep-python.cxx:3508: typemap_utils.cpp: In function 'PyObject* py_volume_object()': typemap_utils.cpp:102:15: warning: unused variable 'geom_mod' [-Wunused-variable] 102 | PyObject *geom_mod = get_geom_mod(); | ^~~~~~~~ typemap_utils.cpp: In function 'int get_attr_material(PyObject*, meep_geom::material_data**)': typemap_utils.cpp:313:7: warning: variable 'rval' set but not used [-Wunused-but-set-variable] 313 | int rval = 1; | ^~~~ typemap_utils.cpp: In function 'int pymaterial_grid_to_material_grid(PyObject*, meep_geom::material_data*)': typemap_utils.cpp:459:68: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] 459 | default: meep::abort("Invalid material grid enumeration code: %d.\n", gt_enum); | ~^ ~~~~~~~ | | | | int long int | %ld meep-python.cxx: In function 'void _get_gradient(PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*)': meep-python.cxx:4598:5: warning: passing NULL to non-pointer argument 4 of 'int SWIG_Python_ConvertPtrAndOwn(PyObject*, void**, swig_type_info*, int, int*)' [-Wconversion-null] 4598 | SWIG_ConvertPtr(swigobj,&where,NULL,NULL); | ^~~~~~~~~~~~~~~ meep-python.cxx:2100:81: note: declared here 2100 | SWIG_Python_ConvertPtrAndOwn(PyObject *obj, void **ptr, swig_type_info *ty, int flags, int *own) { | ~~~~^~~~~ meep-python.cxx:4618:5: warning: passing NULL to non-pointer argument 4 of 'int SWIG_Python_ConvertPtrAndOwn(PyObject*, void**, swig_type_info*, int, int*)' [-Wconversion-null] 4618 | SWIG_ConvertPtr(f,&f_v,NULL,NULL); | ^~~~~~~~~~~~~~~ meep-python.cxx:2100:81: note: declared here 2100 | SWIG_Python_ConvertPtrAndOwn(PyObject *obj, void **ptr, swig_type_info *ty, int flags, int *own) { | ~~~~^~~~~ meep-python.cxx: In function 'void std_vector_Sl_meep_volume_Sg____setitem____SWIG_2(std::vector*, std::vector::difference_type, const value_type&)': meep-python.cxx:6164:33: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 6164 | *(swig::getpos(self,i)) = x; | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_signed_direction___mul__(PyObject*, PyObject*)': meep-python.cxx:21799:39: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 21799 | result = (arg1)->operator *(arg2); | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_flip(PyObject*, PyObject*)': meep-python.cxx:22231:15: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 22231 | arg1 = *temp; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx:22237:31: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 22237 | result = meep::flip(arg1); | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_abort__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:22389:103: warning: unused parameter 'varargs' [-Wunused-parameter] 22389 | SWIGINTERN PyObject *_wrap_abort__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_symmetry_transform__SWIG_0(PyObject*, PyObject*)': meep-python.cxx:33158:67: warning: implicitly-declared 'constexpr meep::signed_direction& meep::signed_direction::operator=(const meep::signed_direction&)' is deprecated [-Wdeprecated-copy] 33158 | result = ((meep::symmetry const *)arg1)->transform(arg2,arg3); | ^ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:86:3: note: because 'meep::signed_direction' has user-provided 'meep::signed_direction::signed_direction(const meep::signed_direction&)' 86 | signed_direction(const signed_direction &sd) { | ^~~~~~~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_volume_list_v_set(PyObject*, PyObject*)': meep-python.cxx:34610:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 34610 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_structure_chunk_v_set(PyObject*, PyObject*)': meep-python.cxx:43451:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 43451 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_structure_v_set(PyObject*, PyObject*)': meep-python.cxx:46966:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 46966 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_flux_where_set(PyObject*, PyObject*)': meep-python.cxx:62085:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 62085 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_energy_where_set(PyObject*, PyObject*)': meep-python.cxx:63999:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 63999 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_force_where_set(PyObject*, PyObject*)': meep-python.cxx:65641:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 65641 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_near2far_where_set(PyObject*, PyObject*)': meep-python.cxx:67996:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 67996 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_dft_fields_where_set(PyObject*, PyObject*)': meep-python.cxx:69224:30: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 69224 | if (arg1) (arg1)->where = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_fields_chunk_v_set(PyObject*, PyObject*)': meep-python.cxx:70839:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 70839 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_fields_v_set(PyObject*, PyObject*)': meep-python.cxx:74115:26: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 74115 | if (arg1) (arg1)->v = *arg2; | ^~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114035:111: warning: unused parameter 'varargs' [-Wunused-parameter] 114035 | SWIGINTERN PyObject *_wrap_master_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf_stderr__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114081:118: warning: unused parameter 'varargs' [-Wunused-parameter] 114081 | SWIGINTERN PyObject *_wrap_master_printf_stderr__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_debug_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114127:110: warning: unused parameter 'varargs' [-Wunused-parameter] 114127 | SWIGINTERN PyObject *_wrap_debug_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_fprintf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:114173:112: warning: unused parameter 'varargs' [-Wunused-parameter] 114173 | SWIGINTERN PyObject *_wrap_master_fprintf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In instantiation of 'void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector; Difference = int; InputSeq = std::vector; Py_ssize_t = int]': meep-python.cxx:6105:97: required from here meep-python.cxx:5155:17: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 5155 | *it++ = *isit++; | ~~~~~~^~~~~~~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ meep-python.cxx:5171:15: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 5171 | *it++ = *isit++; | ~~~~~~^~~~~~~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ In file included from meep-python.cxx:3508: typemap_utils.cpp: In function 'PyObject* gobj_to_py_obj(geometric_object*)': typemap_utils.cpp:1003:18: warning: control reaches end of non-void function [-Wreturn-type] 1003 | meep::abort("Conversion of non-prism geometric_object to Python is not supported"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ typemap_utils.cpp: In function 'PyObject* material_to_py_material(meep_geom::material_type)': typemap_utils.cpp:704:18: warning: control reaches end of non-void function [-Wreturn-type] 704 | meep::abort("Can only convert C++ medium_struct to Python"); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ typemap_utils.cpp: At global scope: typemap_utils.cpp:98:18: warning: 'PyObject* py_volume_object()' defined but not used [-Wunused-function] 98 | static PyObject *py_volume_object() { | ^~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator > >; _Tp = meep_geom::fragment_stats; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 721 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = meep::volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from meep-python.cxx:2938: ../src/meep/vec.hpp: In function 'PyObject* _wrap_field_type_component(PyObject*, PyObject*)': ../src/meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_cycle_component(PyObject*, PyObject*)': meep-python.cxx:23411:28: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 23411 | resultobj = SWIG_From_int(static_cast< int >(result)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from meep-python.cxx:2938: ../src/meep/vec.hpp: In function 'PyObject* _wrap_direction_component(PyObject*, PyObject*)': ../src/meep/vec.hpp:459:52: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 459 | return int(direction_component(component(c), d)); | ^ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ ../src/meep/vec.hpp:432:32: warning: 'start_point' may be used uninitialized in this function [-Wmaybe-uninitialized] 432 | case P: return (component)(start_point + 3); | ^~~~~~~~~~~ ../src/meep/vec.hpp:414:13: note: 'start_point' was declared here 414 | component start_point; | ^~~~~~~~~~~ In file included from meep-python.cxx:3508: typemap_utils.cpp: In function 'int pymaterial_to_material(PyObject*, meep_geom::material_data**)': typemap_utils.cpp:565:7: warning: 'md' may be used uninitialized in this function [-Wmaybe-uninitialized] 565 | *mt = md; | ~~~~^~~~ meep-python.cxx: In function 'void _get_gradient(PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*)': meep-python.cxx:4622:42: warning: 'f_v' may be used uninitialized in this function [-Wmaybe-uninitialized] 4622 | meep_geom::material_grids_addgradient(grad_c,ng,fields_a_c,fields_f_c,frequencies_c,nf,scalegrad,*where_vol,geometry_tree,f_c); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep-python.cxx:4614:49: warning: 'where' may be used uninitialized in this function [-Wmaybe-uninitialized] 4614 | geom_box_tree geometry_tree = calculate_tree(*where_vol,*l); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const meep_geom::fragment_stats&}; _Tp = meep_geom::fragment_stats; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_FragmentStatsVector_push_back(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector >; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_FragmentStatsVector_append(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = meep_geom::fragment_stats; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 171 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = meep_geom::fragment_stats; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 184 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::delslice(Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector >; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector >; Difference = int; InputSeq = std::vector >]': /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_FragmentStatsVector___delslice__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, _Arg&&) [with _Arg = meep_geom::fragment_stats; _Tp = meep_geom::fragment_stats; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:395:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 395 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = meep_geom::fragment_stats; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const meep::volume&}; _Tp = meep::volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_VolumeVector_push_back(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_VolumeVector_append(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = meep::volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 171 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = meep::volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 184 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::delslice(Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector; Difference = int; InputSeq = std::vector]': /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_VolumeVector___delslice__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, _Arg&&) [with _Arg = meep::volume; _Tp = meep::volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:395:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 395 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = meep::volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const meep::grid_volume&}; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_GridVolumeVector_push_back(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_GridVolumeVector_append(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 171 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 184 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::delslice(Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector; Difference = int; InputSeq = std::vector]': /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_GridVolumeVector___delslice__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, _Arg&&) [with _Arg = meep::grid_volume; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:395:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 395 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_DoubleVector_append(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_DoubleVector_push_back(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 171 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 184 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::delslice(Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector; Difference = int; InputSeq = std::vector]': /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_DoubleVector___delslice__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, _Arg&&) [with _Arg = double; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:395:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 395 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::complex&}; _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_ComplexVector_append(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector >; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_ComplexVector_push_back(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 171 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 184 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::delslice(Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector >; Difference = int]': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector >; Difference = int; InputSeq = std::vector >]': /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 1665 | _M_range_insert(__pos, __first, __last, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 1666 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_ComplexVector___delslice__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, _Arg&&) [with _Arg = std::complex; _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:395:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 395 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {meep_geom::fragment_stats}; _Tp = meep_geom::fragment_stats; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In static member function 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector >; T = meep_geom::fragment_stats]': /usr/include/c++/10/bits/vector.tcc:354:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 354 | _M_insert_aux(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:356:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 356 | _M_realloc_insert(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In function 'PyObject* _wrap_FragmentStatsVector_insert(PyObject*, PyObject*)': /usr/include/c++/10/bits/vector.tcc:154:19: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator > >' changed in GCC 7.1 154 | _M_insert_aux(__pos, std::move(__x_copy._M_val())); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 161 | _M_realloc_insert(begin() + (__position - cbegin()), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h:1338:16: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1338 | _M_fill_insert(begin() + __offset, __n, __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_FragmentStatsVector_resize(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_FragmentStatsVector_erase(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_FragmentStatsVector___delitem__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {meep::volume}; _Tp = meep::volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In static member function 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector; T = meep::volume]': /usr/include/c++/10/bits/vector.tcc:354:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 354 | _M_insert_aux(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:356:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 356 | _M_realloc_insert(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In function 'PyObject* _wrap_VolumeVector_insert(PyObject*, PyObject*)': /usr/include/c++/10/bits/vector.tcc:154:19: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >' changed in GCC 7.1 154 | _M_insert_aux(__pos, std::move(__x_copy._M_val())); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 161 | _M_realloc_insert(begin() + (__position - cbegin()), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h:1338:16: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1338 | _M_fill_insert(begin() + __offset, __n, __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_VolumeVector_erase(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_VolumeVector___delitem__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {meep::grid_volume}; _Tp = meep::grid_volume; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In static member function 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector; T = meep::grid_volume]': /usr/include/c++/10/bits/vector.tcc:354:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 354 | _M_insert_aux(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:356:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 356 | _M_realloc_insert(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In function 'PyObject* _wrap_GridVolumeVector_insert(PyObject*, PyObject*)': /usr/include/c++/10/bits/vector.tcc:154:19: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >' changed in GCC 7.1 154 | _M_insert_aux(__pos, std::move(__x_copy._M_val())); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 161 | _M_realloc_insert(begin() + (__position - cbegin()), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h:1338:16: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1338 | _M_fill_insert(begin() + __offset, __n, __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_GridVolumeVector_resize(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_GridVolumeVector_erase(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_GridVolumeVector___delitem__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In static member function 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector; T = double]': /usr/include/c++/10/bits/vector.tcc:354:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 354 | _M_insert_aux(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:356:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 356 | _M_realloc_insert(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_DoubleVector_erase(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_DoubleVector___delitem__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In function 'PyObject* _wrap_DoubleVector_insert(PyObject*, PyObject*)': /usr/include/c++/10/bits/vector.tcc:154:19: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator >' changed in GCC 7.1 154 | _M_insert_aux(__pos, std::move(__x_copy._M_val())); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 161 | _M_realloc_insert(begin() + (__position - cbegin()), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h:1338:16: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1338 | _M_fill_insert(begin() + __offset, __n, __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_DoubleVector_resize(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::complex}; _Tp = std::complex; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In static member function 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector >; T = std::complex]': /usr/include/c++/10/bits/vector.tcc:354:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 354 | _M_insert_aux(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:356:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 356 | _M_realloc_insert(begin() + __n, std::move(__v)); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_ComplexVector_erase(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1461 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_ComplexVector___delitem__(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1431 | { return _M_erase(begin() + (__position - cbegin())); } | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/vector.tcc: In function 'PyObject* _wrap_ComplexVector_insert(PyObject*, PyObject*)': /usr/include/c++/10/bits/vector.tcc:154:19: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 154 | _M_insert_aux(__pos, std::move(__x_copy._M_val())); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 161 | _M_realloc_insert(begin() + (__position - cbegin()), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../src/meep/vec.hpp:23, from meep-python.cxx:2938: /usr/include/c++/10/bits/stl_vector.h:1338:16: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1338 | _M_fill_insert(begin() + __offset, __n, __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In function 'PyObject* _wrap_ComplexVector_resize(PyObject*, PyObject*)': /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cxx -fPIC -DPIC -o _meep_la-meep-python.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 23:1:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.9/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o .libs/_meep_la-meep-python.o -Wl,-rpath -Wl,/build/meep-mpi-default-1.17.1/src/.libs ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -Wl,-soname -Wl,_meep.so.23 -o .libs/_meep.so.23.0.1 libtool: link: (cd ".libs" && rm -f "_meep.so.23" && ln -s "_meep.so.23.0.1" "_meep.so.23") libtool: link: (cd ".libs" && rm -f "_meep.so" && ln -s "_meep.so.23.0.1" "_meep.so") libtool: link: arm-linux-gnueabihf-ar cr .libs/_meep.a _meep_la-meep-python.o libtool: link: arm-linux-gnueabihf-ranlib .libs/_meep.a libtool: link: ( cd ".libs" && rm -f "_meep.la" && ln -s "../_meep.la" "_meep.la" ) mkdir -p meep cp __init__.py ./geom.py ./simulation.py ./source.py ./visualization.py ./materials.py ./verbosity_mgr.py .libs/_meep.so meep make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[3]: Entering directory '/build/meep-mpi-default-1.17.1' cp -f ./meep-pkgconfig meep.pc make[3]: Leaving directory '/build/meep-mpi-default-1.17.1' make[2]: Leaving directory '/build/meep-mpi-default-1.17.1' make[1]: Leaving directory '/build/meep-mpi-default-1.17.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/meep-mpi-default-1.17.1' echo if [ "" = "armel" ] || \ [ "" = "riscv64" ] || \ [ "" = "hurd-i386" ] ; then \ echo "Do not make tests on this architecture" ;\ else \ echo "Do make tests on this architecture" ;\ make check; \ cat tests/test-suite.log; \ fi Do make tests on this architecture make[2]: Entering directory '/build/meep-mpi-default-1.17.1' Making check in src make[3]: Entering directory '/build/meep-mpi-default-1.17.1/src' make check-recursive make[4]: Entering directory '/build/meep-mpi-default-1.17.1/src' Making check in support make[5]: Entering directory '/build/meep-mpi-default-1.17.1/src/support' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/src/support' make[5]: Entering directory '/build/meep-mpi-default-1.17.1/src' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/src' make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/src' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/src' Making check in tests make[3]: Entering directory '/build/meep-mpi-default-1.17.1/tests' make aniso_disp bench bragg_transmission convergence_cyl_waveguide cylindrical flux harmonics integrate known_results near2far one_dimensional physical stress_tensor symmetry three_d two_dimensional 2D_convergence h5test pml pw-source-ll ring-ll cyl-ellipsoid-ll absorber-1d-ll array-slice-ll user-defined-material dft-fields gdsII-3d bend-flux-ll array-metadata make[4]: Entering directory '/build/meep-mpi-default-1.17.1/tests' mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o aniso_disp.o aniso_disp.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o aniso_disp aniso_disp.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/aniso_disp aniso_disp.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bench.o bench.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o bench bench.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/bench bench.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bragg_transmission.o bragg_transmission.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o bragg_transmission bragg_transmission.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/bragg_transmission bragg_transmission.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o convergence_cyl_waveguide.o convergence_cyl_waveguide.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o convergence_cyl_waveguide convergence_cyl_waveguide.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/convergence_cyl_waveguide convergence_cyl_waveguide.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cylindrical.o cylindrical.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o cylindrical cylindrical.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/cylindrical cylindrical.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o flux.o flux.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o flux flux.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/flux flux.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o harmonics.o harmonics.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o harmonics harmonics.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/harmonics harmonics.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time 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-L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/h5test h5test.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o pml.o pml.cpp pml.cpp: In function 'int check_pmlcyl(double (*)(const meep::vec&))': pml.cpp:213:10: warning: variable 'prev_refl_const' set but not used [-Wunused-but-set-variable] 213 | double prev_refl_const = 0.0, refl_const = 0.0; | ^~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o pml pml.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf 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pw-source-ll.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o pw-source-ll pw-source-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/pw-source-ll pw-source-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl 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-Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/user-defined-material user-defined-material.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft-fields.o dft-fields.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o dft-fields dft-fields.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/dft-fields dft-fields.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o gdsII-3d.o gdsII-3d.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o gdsII-3d gdsII-3d.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/gdsII-3d gdsII-3d.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bend-flux-ll.o bend-flux-ll.cpp bend-flux-ll.cpp: In function 'meep::structure create_structure_from_GDSII(char*, bool, meep::volume&, meep::volume&, meep::volume&)': bend-flux-ll.cpp:70:61: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 70 | vsrc = meep_geom::get_GDSII_volume(GDSIIFile, SOURCE_LAYER); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:71:61: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 71 | vrefl = meep_geom::get_GDSII_volume(GDSIIFile, RFLUX_LAYER); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:73:97: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 73 | meep_geom::get_GDSII_volume(GDSIIFile, (no_bend ? STRAIGHT_TFLUX_LAYER : BENT_TFLUX_LAYER)); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp: In function 'meep::structure create_structure_by_hand(bool, bool, meep::volume&, meep::volume&, meep::volume&)': bend-flux-ll.cpp:174:98: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 174 | volume(vec(-0.5 * sx + dpml, wvg_ycen - 0.5 * w), vec(-0.5 * sx + dpml, wvg_ycen + 0.5 * w)); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:175:88: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 175 | vrefl = volume(vec(-0.5 * sx + 1.5, wvg_ycen - w), vec(-0.5 * sx + 1.5, wvg_ycen + w)); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ bend-flux-ll.cpp:177:99: warning: implicitly-declared 'constexpr meep::volume& meep::volume::operator=(const meep::volume&)' is deprecated [-Wdeprecated-copy] 177 | : volume(vec(wvg_xcen - w, 0.5 * sy - 1.5), vec(wvg_xcen + w, 0.5 * sy - 1.5))); | ^ In file included from ../src/meep.hpp:24, from bend-flux-ll.cpp:16: ../src/meep/vec.hpp:829:3: note: because 'meep::volume' has user-provided 'meep::volume::volume(const meep::volume&)' 829 | volume(const volume &vol); | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o bend-flux-ll bend-flux-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/bend-flux-ll bend-flux-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -pthread -I/usr/include/guile/2.2 -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array-metadata.o array-metadata.cpp In file included from /usr/include/c++/10/vector:72, from array-metadata.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from array-metadata.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In function 'bool test_array_metadata(meep::fields&, const meep::volume&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o array-metadata array-metadata.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm libtool: link: mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o .libs/array-metadata array-metadata.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/tests' make check-TESTS make[4]: Entering directory '/build/meep-mpi-default-1.17.1/tests' make[5]: Entering directory '/build/meep-mpi-default-1.17.1/tests' PASS: aniso_disp PASS: bench PASS: bragg_transmission PASS: convergence_cyl_waveguide PASS: cylindrical PASS: flux PASS: harmonics PASS: integrate PASS: known_results PASS: near2far PASS: one_dimensional PASS: physical PASS: stress_tensor PASS: symmetry PASS: three_d PASS: two_dimensional PASS: 2D_convergence PASS: h5test PASS: pml ============================================================================ Testsuite summary for meep 1.17.1 ============================================================================ # TOTAL: 19 # PASS: 19 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/tests' make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/tests' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/tests' Making check in scheme make[3]: Entering directory '/build/meep-mpi-default-1.17.1/scheme' make check-am make[4]: Entering directory '/build/meep-mpi-default-1.17.1/scheme' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/scheme' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/scheme' Making check in python make[3]: Entering directory '/build/meep-mpi-default-1.17.1/python' make check-am make[4]: Entering directory '/build/meep-mpi-default-1.17.1/python' make check-TESTS make[5]: Entering directory '/build/meep-mpi-default-1.17.1/python' make[6]: Entering directory '/build/meep-mpi-default-1.17.1/python' FAIL: tests/3rd_harm_1d.py FAIL: tests/absorber_1d.py FAIL: tests/antenna_radiation.py FAIL: tests/array_metadata.py FAIL: tests/bend_flux.py FAIL: tests/cavity_arrayslice.py FAIL: tests/cavity_farfield.py FAIL: tests/chunks.py FAIL: tests/cyl_ellipsoid.py FAIL: tests/dft_energy.py FAIL: tests/dft_fields.py FAIL: tests/divide_mpi_processes.py FAIL: tests/eigfreq.py FAIL: tests/faraday_rotation.py FAIL: tests/field_functions.py FAIL: tests/force.py FAIL: tests/fragment_stats.py FAIL: tests/gaussianbeam.py FAIL: tests/geom.py FAIL: tests/get_point.py FAIL: tests/holey_wvg_bands.py FAIL: tests/holey_wvg_cavity.py FAIL: tests/ldos.py PASS: tests/material_grid.py PASS: tests/medium_evaluations.py FAIL: tests/multilevel_atom.py FAIL: tests/n2f_periodic.py FAIL: tests/oblique_source.py FAIL: tests/physical.py FAIL: tests/prism.py FAIL: tests/pw_source.py FAIL: tests/refl_angular.py FAIL: tests/ring.py FAIL: tests/ring_cyl.py FAIL: tests/simulation.py FAIL: tests/special_kz.py FAIL: tests/source.py FAIL: tests/user_defined_material.py FAIL: tests/visualization.py ============================================================================ Testsuite summary for meep 1.17.1 ============================================================================ # TOTAL: 39 # PASS: 2 # SKIP: 0 # XFAIL: 0 # FAIL: 37 # XPASS: 0 # ERROR: 0 ============================================================================ See python/test-suite.log ============================================================================ make[6]: *** [Makefile:1081: test-suite.log] Error 1 make[6]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[5]: *** [Makefile:1189: check-TESTS] Error 2 make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[4]: *** [Makefile:1255: check-am] Error 2 make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[3]: *** [Makefile:1257: check] Error 2 make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[2]: *** [Makefile:508: check-recursive] Error 1 make[2]: Leaving directory '/build/meep-mpi-default-1.17.1' ======================================= meep 1.17.1: tests/test-suite.log ======================================= # TOTAL: 19 # PASS: 19 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 .. contents:: :depth: 2 make[1]: Leaving directory '/build/meep-mpi-default-1.17.1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with autoreconf dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/meep-mpi-default-1.17.1' dh_installchangelogs NEWS.md dh_auto_install make -j1 install DESTDIR=/build/meep-mpi-default-1.17.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/meep-mpi-default-1.17.1' Making install in src make[3]: Entering directory '/build/meep-mpi-default-1.17.1/src' make install-recursive make[4]: Entering directory '/build/meep-mpi-default-1.17.1/src' Making install in support make[5]: Entering directory '/build/meep-mpi-default-1.17.1/src/support' make[6]: Entering directory '/build/meep-mpi-default-1.17.1/src/support' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/meep-mpi-default-1.17.1/src/support' make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/src/support' make[5]: Entering directory '/build/meep-mpi-default-1.17.1/src' make[6]: Entering directory '/build/meep-mpi-default-1.17.1/src' /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/sh ../libtool --mode=install /usr/bin/install -c libmeep.la '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libmeep.so.23.0.1 /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.so.23.0.1 libtool: install: (cd /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libmeep.so.23.0.1 libmeep.so.23 || { rm -f libmeep.so.23 && ln -s libmeep.so.23.0.1 libmeep.so.23; }; }) libtool: install: (cd /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libmeep.so.23.0.1 libmeep.so || { rm -f libmeep.so && ln -s libmeep.so.23.0.1 libmeep.so; }; }) libtool: install: /usr/bin/install -c .libs/libmeep.lai /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.la libtool: install: /usr/bin/install -c .libs/libmeep.a /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.a libtool: install: chmod 644 /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.a libtool: install: arm-linux-gnueabihf-ranlib /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 meep.hpp '/build/meep-mpi-default-1.17.1/debian/tmp/usr/include' /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 meep/mympi.hpp meep/vec.hpp meepgeom.hpp material_data.hpp adjust_verbosity.hpp '/build/meep-mpi-default-1.17.1/debian/tmp/usr/include/meep' make[6]: Leaving directory '/build/meep-mpi-default-1.17.1/src' make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/src' make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/src' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/src' Making install in tests make[3]: Entering directory '/build/meep-mpi-default-1.17.1/tests' make[4]: Entering directory '/build/meep-mpi-default-1.17.1/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/tests' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/tests' Making install in scheme make[3]: Entering directory '/build/meep-mpi-default-1.17.1/scheme' make install-am make[4]: Entering directory '/build/meep-mpi-default-1.17.1/scheme' make[5]: Entering directory '/build/meep-mpi-default-1.17.1/scheme' /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/bin' /bin/sh ../libtool --mode=install /usr/bin/install -c meep '/build/meep-mpi-default-1.17.1/debian/tmp/usr/bin' libtool: warning: '../src/libmeep.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/meep /build/meep-mpi-default-1.17.1/debian/tmp/usr/bin/meep /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/share/meep' /usr/bin/install -c -m 644 meep.scm meep-enums.scm casimir.scm materials.scm '/build/meep-mpi-default-1.17.1/debian/tmp/usr/share/meep' make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/scheme' make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/scheme' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/scheme' Making install in python make[3]: Entering directory '/build/meep-mpi-default-1.17.1/python' make install-am make[4]: Entering directory '/build/meep-mpi-default-1.17.1/python' make[5]: Entering directory '/build/meep-mpi-default-1.17.1/python' /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' /bin/sh ../libtool --mode=install /usr/bin/install -c _meep.la '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' libtool: warning: relinking '_meep.la' libtool: install: (cd /build/meep-mpi-default-1.17.1/python; /bin/sh "/build/meep-mpi-default-1.17.1/libtool" --tag CXX --mode=relink mpic++ -g -O2 -fdebug-prefix-map=/build/meep-mpi-default-1.17.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 23:1:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.9/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -lm -inst-prefix-dir /build/meep-mpi-default-1.17.1/debian/tmp) libtool: relink: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o .libs/_meep_la-meep-python.o -L/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lmeep -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lfftw3 -lgfortran -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -Wl,-soname -Wl,_meep.so.23 -o .libs/_meep.so.23.0.1 libtool: install: /usr/bin/install -c .libs/_meep.so.23.0.1T /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so.23.0.1 libtool: install: (cd /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep && { ln -s -f _meep.so.23.0.1 _meep.so.23 || { rm -f _meep.so.23 && ln -s _meep.so.23.0.1 _meep.so.23; }; }) libtool: install: (cd /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep && { ln -s -f _meep.so.23.0.1 _meep.so || { rm -f _meep.so && ln -s _meep.so.23.0.1 _meep.so; }; }) libtool: install: /usr/bin/install -c .libs/_meep.lai /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.la libtool: install: /usr/bin/install -c .libs/_meep.a /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: install: chmod 644 /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: install: arm-linux-gnueabihf-ranlib /build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: warning: remember to run 'libtool --finish /usr/lib/python3.9/site-packages/meep' /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint' /usr/bin/install -c -m 644 ./adjoint/__init__.py ./adjoint/basis.py ./adjoint/objective.py ./adjoint/optimization_problem.py ./adjoint/filters.py ./adjoint/filter_source.py '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint' Byte-compiling python modules... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.py Byte-compiling python modules (optimized versions) ... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.py /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' /usr/bin/install -c -m 644 __init__.py ./geom.py ./simulation.py ./source.py ./visualization.py ./materials.py ./verbosity_mgr.py '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/python3.9/site-packages/meep' Byte-compiling python modules... __init__.pygeom.pysimulation.pysource.pyvisualization.pymaterials.pyverbosity_mgr.py Byte-compiling python modules (optimized versions) ... __init__.pygeom.pysimulation.pysource.pyvisualization.pymaterials.pyverbosity_mgr.py make install-data-hook make[6]: Entering directory '/build/meep-mpi-default-1.17.1/python' make[6]: Nothing to be done for 'install-data-hook'. make[6]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[5]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[4]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1/python' make[3]: Entering directory '/build/meep-mpi-default-1.17.1' make[4]: Entering directory '/build/meep-mpi-default-1.17.1' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 meep.pc '/build/meep-mpi-default-1.17.1/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' make[4]: Leaving directory '/build/meep-mpi-default-1.17.1' make[3]: Leaving directory '/build/meep-mpi-default-1.17.1' make[2]: Leaving directory '/build/meep-mpi-default-1.17.1' find . ./libpympb ./libpympb/Makefile ./libpympb/Makefile.in ./libpympb/pympb.cpp ./libpympb/pympb.hpp ./libpympb/Makefile.am ./LICENSE ./python ./python/solver.py ./python/Makefile ./python/test-suite.log ./python/.libs ./python/.libs/_meep.so ./python/.libs/_meep.so.23.0.1 ./python/.libs/_meep.la ./python/.libs/_meep.so.23.0.1T ./python/.libs/_meep.lai ./python/.libs/_meep_la-meep-python.o ./python/.libs/_meep.so.23 ./python/.libs/_meep.a ./python/meep.i ./python/Makefile.in ./python/source.py ./python/meep.py ./python/mpb_data.py ./python/_meep.la ./python/numpy.i ./python/visualization.py ./python/_meep_la-meep-python.lo ./python/mpb.i ./python/typemap_utils.cpp ./python/simulation.py ./python/__init__.py ./python/adjoint ./python/adjoint/basis.py ./python/adjoint/filter_source.py ./python/adjoint/filters.py ./python/adjoint/optimization_problem.py ./python/adjoint/__init__.py ./python/adjoint/objective.py ./python/tests ./python/tests/eigfreq.log ./python/tests/user_defined_material.py ./python/tests/faraday_rotation.log ./python/tests/ring_cyl.trs ./python/tests/get_point.log ./python/tests/multilevel_atom.trs ./python/tests/diffracted_planewave.py ./python/tests/prism.log ./python/tests/holey_wvg_cavity.log ./python/tests/physical.log ./python/tests/ldos.py ./python/tests/holey_wvg_cavity.py ./python/tests/ldos.log ./python/tests/medium_evaluations.py ./python/tests/dft_energy.log ./python/tests/cyl_ellipsoid.trs ./python/tests/oblique_source.log ./python/tests/material_grid.trs ./python/tests/fragment_stats.py ./python/tests/data ./python/tests/data/nonconvex_prism_vertices1.npz ./python/tests/data/tutorial-tot.rpwr.k16.b08.te.h5 ./python/tests/data/cavity-farfield.h5 ./python/tests/data/amp_func_file.h5 ./python/tests/data/tutorial-d.k16.b08.te.h5 ./python/tests/data/tutorial-b.k16.b08.te.h5 ./python/tests/data/line-defect-e.k04.b12.z.tm.h5 ./python/tests/data/cavity_arrayslice_1d.npy ./python/tests/data/hole-slab-h.k01.b09.z.zeven.h5 ./python/tests/data/nonconvex_prism_vertices2.npz ./python/tests/data/tutorial-epsilon.h5 ./python/tests/data/diamond-dpwr.k06.b05.h5 ./python/tests/data/tri-rods-epsilon-r-m3-n32.h5 ./python/tests/data/eps_input_file_test.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm.h5 ./python/tests/data/subpixel_avg-epsilon.h5 ./python/tests/data/nonconvex_prism_vertices3.npz ./python/tests/data/bragg-h.k01.b08.y.tm.h5 ./python/tests/data/tutorial-e.k16.b08.z.tm.h5 ./python/tests/data/tutorial-d.k16.b02.te.h5 ./python/tests/data/tutorial-C.k16.b08.te.h5 ./python/tests/data/tutorial-te-eigenvectors-3-3.h5 ./python/tests/data/convex_prism_vertices.npz ./python/tests/data/tutorial-flux.v.k11.b08.te.h5 ./python/tests/data/converted-tri-rods-e.k11.b08.tm.h5 ./python/tests/data/converted-diamond-dpwr.k06.b05.h5 ./python/tests/data/tutorial-te-eigenvectors.h5 ./python/tests/data/tutorial-te-eigenvectors-8-1.h5 ./python/tests/data/tutorial-h.k16.b08.te.h5 ./python/tests/data/tutorial-mu.h5 ./python/tests/data/cavity_arrayslice_2d.npy ./python/tests/data/bend-flux.gds ./python/tests/data/cavity-farfield-4-freqs.h5 ./python/tests/data/tutorial-d.k01.b02.te.h5 ./python/tests/data/spiral.gds ./python/tests/data/tutorial-e.k16.b08.te.h5 ./python/tests/data/strip-flux.v.k01.b04.x.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm-r-m3-n32.h5 ./python/tests/holey_wvg_bands.trs ./python/tests/array_metadata.log ./python/tests/field_functions.log ./python/tests/eigfreq.trs ./python/tests/bend_flux.trs ./python/tests/n2f_periodic.log ./python/tests/dft_fields.log ./python/tests/dft_fields.py ./python/tests/special_kz.log ./python/tests/wvg_src.py ./python/tests/kdom.py ./python/tests/refl_angular.trs ./python/tests/mode_coeffs.py ./python/tests/source.py ./python/tests/ldos.trs ./python/tests/array_metadata.trs ./python/tests/n2f_periodic.py ./python/tests/material_dispersion.py ./python/tests/dispersive_eigenmode.py ./python/tests/fragment_stats.trs ./python/tests/physical.py ./python/tests/visualization.log ./python/tests/simulation.log ./python/tests/absorber_1d.py ./python/tests/faraday_rotation.trs ./python/tests/antenna_radiation.py ./python/tests/3rd_harm_1d.log ./python/tests/medium_evaluations.log ./python/tests/fragment_stats.log ./python/tests/medium_evaluations.trs ./python/tests/n2f_periodic.trs ./python/tests/3rd_harm_1d.py ./python/tests/special_kz.trs ./python/tests/visualization.trs ./python/tests/cavity_farfield.py ./python/tests/field_functions.trs ./python/tests/geom.log ./python/tests/gaussianbeam.py ./python/tests/utils.py ./python/tests/eigfreq.py ./python/tests/dft_energy.trs ./python/tests/absorber_1d.trs ./python/tests/dft_fields.trs ./python/tests/chunks.log ./python/tests/cavity_farfield.trs ./python/tests/multilevel_atom.log ./python/tests/ring_cyl.py ./python/tests/absorber_1d.log ./python/tests/3rd_harm_1d.trs ./python/tests/holey_wvg_bands.py ./python/tests/prism.py ./python/tests/chunks.py ./python/tests/binary_grating.py ./python/tests/visualization.py ./python/tests/ring.py ./python/tests/holey_wvg_bands.log ./python/tests/__pycache__ ./python/tests/__pycache__/utils.cpython-39.pyc ./python/tests/force.py ./python/tests/chunks.trs ./python/tests/pw_source.py ./python/tests/ring.trs ./python/tests/force.log ./python/tests/pw_source.log ./python/tests/antenna_radiation.log ./python/tests/mode_decomposition.py ./python/tests/get_point.py ./python/tests/test_verbosity_mgr.py ./python/tests/dft_energy.py ./python/tests/array_metadata.py ./python/tests/divide_mpi_processes.log ./python/tests/antenna_radiation.trs ./python/tests/source.trs ./python/tests/prism.trs ./python/tests/simulation.py ./python/tests/user_defined_material.trs ./python/tests/ring.log ./python/tests/cyl_ellipsoid.py ./python/tests/source.log ./python/tests/divide_mpi_processes.trs ./python/tests/mpb.py ./python/tests/multilevel_atom.py ./python/tests/get_point.trs ./python/tests/pw_source.trs ./python/tests/cyl_ellipsoid.log ./python/tests/gaussianbeam.log ./python/tests/bend_flux.log ./python/tests/geom.trs ./python/tests/cavity_farfield.log ./python/tests/faraday_rotation.py ./python/tests/divide_mpi_processes.py ./python/tests/field_functions.py ./python/tests/force.trs ./python/tests/refl_angular.py ./python/tests/refl_angular.log ./python/tests/geom.py ./python/tests/ring_cyl.log ./python/tests/bend_flux.py ./python/tests/oblique_source.trs ./python/tests/oblique_source.py ./python/tests/cavity_arrayslice.py ./python/tests/simulation.trs ./python/tests/material_grid.py ./python/tests/cavity_arrayslice.trs ./python/tests/holey_wvg_cavity.trs ./python/tests/physical.trs ./python/tests/gaussianbeam.trs ./python/tests/user_defined_material.log ./python/tests/special_kz.py ./python/tests/cavity_arrayslice.log ./python/tests/material_grid.log ./python/verbosity_mgr.py ./python/Makefile.am ./python/_meep_la-meep-python.o ./python/vec.i ./python/geom.py ./python/meep ./python/meep/_meep.so ./python/meep/source.py ./python/meep/visualization.py ./python/meep/__pycache__ ./python/meep/__pycache__/verbosity_mgr.cpython-39.pyc ./python/meep/__pycache__/source.cpython-39.pyc ./python/meep/__pycache__/geom.cpython-39.pyc ./python/meep/__pycache__/simulation.cpython-39.pyc ./python/meep/__pycache__/materials.cpython-39.pyc ./python/meep/__pycache__/__init__.cpython-39.pyc ./python/meep/__pycache__/visualization.cpython-39.pyc ./python/meep/simulation.py ./python/meep/__init__.py ./python/meep/verbosity_mgr.py ./python/meep/geom.py ./python/meep/materials.py ./python/meep-python.cxx ./python/materials.py ./python/examples ./python/examples/mpb_diamond.py ./python/examples/binary_grating_phasemap.ipynb ./python/examples/phase_in_material.py ./python/examples/3rd-harm-1d.py ./python/examples/diffracted_planewave.py ./python/examples/antenna-radiation.ipynb ./python/examples/parallel-wvgs-mpb.py ./python/examples/mpb_tri_rods.py ./python/examples/stochastic_emitter.py ./python/examples/perturbation_theory_2d.py ./python/examples/solve-cw.ipynb ./python/examples/mpb_tri_holes.py ./python/examples/polarization_grating.py ./python/examples/holey-wvg-cavity.py ./python/examples/mie_scattering.py ./python/examples/media ./python/examples/media/oblique-source-normal.mp4 ./python/examples/media/bent_waveguide.mp4 ./python/examples/media/visualization_demo.mp4 ./python/examples/media/visualization_out_plane.mp4 ./python/examples/media/holey-wvg-bands-0.3-0.8838.mp4 ./python/examples/media/straight_waveguide.mp4 ./python/examples/media/visualization_normalize.mp4 ./python/examples/media/ring_mid.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.3175.mp4 ./python/examples/media/ring_large.mp4 ./python/examples/media/hole-wvg-cavity.mp4 ./python/examples/media/ring_simple.mp4 ./python/examples/media/holey-wvg-bands-0.25-0.2506.mp4 ./python/examples/media/visualization_demo.gif ./python/examples/media/holey-wvg-bands-0.1-0.4811.mp4 ./python/examples/media/hole-wvg-cavity-res.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.1896.mp4 ./python/examples/media/oblique-source-eig.mp4 ./python/examples/zone_plate.ipynb ./python/examples/holey-wvg-cavity.ipynb ./python/examples/mpb_bragg_sine.py ./python/examples/polarization_grating.ipynb ./python/examples/mpb_honey_rods.py ./python/examples/wvg-src.py ./python/examples/binary_grating_phasemap.py ./python/examples/straight-waveguide.py ./python/examples/faraday-rotation.py ./python/examples/README.md ./python/examples/finite_grating.py ./python/examples/antenna-radiation.py ./python/examples/3rd-harm-1d.ipynb ./python/examples/ring-mode-overlap.py ./python/examples/parallel-wvgs-force.py ./python/examples/oblique-source.py ./python/examples/gaussian-beam.py ./python/examples/cavity-farfield.ipynb ./python/examples/absorbed_power_density.py ./python/examples/mpb_bragg.py ./python/examples/differential_cross_section.py ./python/examples/binary_grating_oblique.py ./python/examples/bent-waveguide.ipynb ./python/examples/oblique-planewave.ipynb ./python/examples/refl-angular-kz2d.py ./python/examples/binary_grating_n2f.ipynb ./python/examples/ring.ipynb ./python/examples/mpb_sq_rods.py ./python/examples/adjoint_optimization ./python/examples/adjoint_optimization/05-Minimax.ipynb ./python/examples/adjoint_optimization/02-Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/03-Filtered_Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/04-Splitter.ipynb ./python/examples/adjoint_optimization/01-Introduction.ipynb ./python/examples/adjoint_optimization/Near2Far-Optimization-with-Epigraph-Formulation.ipynb ./python/examples/adjoint_optimization/Fourier Fields Optimization in Waveguide Bend.ipynb ./python/examples/bend-flux.py ./python/examples/finite_grating.ipynb ./python/examples/mpb_strip.py ./python/examples/mpb_tutorial.py ./python/examples/metal-cavity-ldos.py ./python/examples/zone_plate.py ./python/examples/oblique-source.ipynb ./python/examples/mpb_data_analysis.py ./python/examples/binary_grating.py ./python/examples/cylinder_cross_section.ipynb ./python/examples/ring.py ./python/examples/mode-decomposition.ipynb ./python/examples/mpb_hole_slab.py ./python/examples/pw-source.py ./python/examples/coupler.ipynb ./python/examples/mpb_line_defect.py ./python/examples/binary_grating_n2f.py ./python/examples/coupler.py ./python/examples/differential_cross_section.ipynb ./python/examples/refl-angular.ipynb ./python/examples/cyl-ellipsoid.py ./python/examples/ring_gds.py ./python/examples/perturbation_theory.py ./python/examples/refl-quartz.py ./python/examples/bent-waveguide.py ./python/examples/stochastic_emitter_line.py ./python/examples/oblique-planewave.py ./python/examples/refl-angular.py ./python/examples/holey-wvg-bands.ipynb ./python/examples/straight-waveguide.ipynb ./python/examples/mode-decomposition.py ./python/examples/binary_grating_oblique.ipynb 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./debian/meep-mpi-default/usr/share/doc/meep-mpi-default ./debian/meep-mpi-default/usr/share/doc/meep-mpi-default/changelog.Debian ./debian/meep-mpi-default/usr/share/doc/meep-mpi-default/changelog ./debian/python3-meep-mpi-default.postinst ./debian/control ./debian/meep-mpi-default.1 ./debian/tmp ./debian/tmp/usr ./debian/tmp/usr/include ./debian/tmp/usr/include/meep.hpp ./debian/tmp/usr/include/meep ./debian/tmp/usr/include/meep/material_data.hpp ./debian/tmp/usr/include/meep/mympi.hpp ./debian/tmp/usr/include/meep/adjust_verbosity.hpp ./debian/tmp/usr/include/meep/vec.hpp ./debian/tmp/usr/include/meep/meepgeom.hpp ./debian/tmp/usr/share ./debian/tmp/usr/share/meep ./debian/tmp/usr/share/meep/meep.scm ./debian/tmp/usr/share/meep/materials.scm ./debian/tmp/usr/share/meep/meep-enums.scm ./debian/tmp/usr/share/meep/casimir.scm ./debian/tmp/usr/lib ./debian/tmp/usr/lib/arm-linux-gnueabihf ./debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.so ./debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.so.23.0.1 ./debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig ./debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/meep.pc ./debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.a ./debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.la ./debian/tmp/usr/lib/arm-linux-gnueabihf/libmeep.so.23 ./debian/tmp/usr/lib/python3.9 ./debian/tmp/usr/lib/python3.9/site-packages ./debian/tmp/usr/lib/python3.9/site-packages/meep ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so.23.0.1 ./debian/tmp/usr/lib/python3.9/site-packages/meep/source.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.la ./debian/tmp/usr/lib/python3.9/site-packages/meep/visualization.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__ ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/__init__.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/visualization.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/verbosity_mgr.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/simulation.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/materials.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/source.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/geom.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/verbosity_mgr.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/simulation.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/materials.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/source.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/__init__.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/visualization.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/__pycache__/geom.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/simulation.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/__init__.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/basis.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/filter_source.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/filters.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__ ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/__init__.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/basis.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filters.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/objective.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/objective.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filter_source.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filter_source.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/__init__.cpython-39.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/basis.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__pycache__/filters.cpython-39.opt-1.pyc ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/optimization_problem.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/__init__.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint/objective.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/verbosity_mgr.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/geom.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/materials.py ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so.23 ./debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a ./debian/tmp/usr/bin ./debian/tmp/usr/bin/meep ./debian/rules ./debian/libmeep-mpi-default23.debhelper.log ./debian/python3-meep-mpi-default.debhelper.log ./debian/debhelper-build-stamp ./debian/python3-meep-mpi-default ./debian/python3-meep-mpi-default/usr ./debian/python3-meep-mpi-default/usr/share ./debian/python3-meep-mpi-default/usr/share/doc ./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default ./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default/changelog.Debian ./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default/changelog ./debian/libmeep-mpi-default-dev.debhelper.log ./debian/meep-mpi-default.install ./debian/libmeep-mpi-default23.lintian-overrides ./debian/meep-mpi-default.manpages ./debian/watch ./debian/changelog ./debian/libmeep-mpi-default-dev.install ./debian/meep-mpi-default.docs ./debian/copyright ./debian/source ./debian/source/format ./debian/source/lintian-overrides ./debian/libmeep-mpi-default23.install ./debian/python3-meep-mpi-default.prerm ./debian/meep-mpi-default.debhelper.log ./debian/README.source ./debian/libmeep-mpi-default23 ./debian/libmeep-mpi-default23/usr ./debian/libmeep-mpi-default23/usr/share ./debian/libmeep-mpi-default23/usr/share/doc ./debian/libmeep-mpi-default23/usr/share/doc/libmeep-mpi-default23 ./debian/libmeep-mpi-default23/usr/share/doc/libmeep-mpi-default23/changelog.Debian ./debian/libmeep-mpi-default23/usr/share/doc/libmeep-mpi-default23/changelog ./debian/patches ./debian/patches/series ./debian/libmeep-mpi-default-dev ./debian/libmeep-mpi-default-dev/usr ./debian/libmeep-mpi-default-dev/usr/share ./debian/libmeep-mpi-default-dev/usr/share/doc ./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev ./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev/changelog.Debian ./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev/changelog ./debian/python3-meep-mpi-default.install ./depcomp ./meep.pc ./configure.ac ./mkdocs.yml ./tests ./tests/near2far.cpp ./tests/cylindrical.trs ./tests/array-metadata.cpp ./tests/2D_convergence.o ./tests/aniso_disp.trs ./tests/array-metadata.o ./tests/known_results.log ./tests/h5test ./tests/ring-ll.o ./tests/harmonics.cpp ./tests/one_dimensional.log ./tests/bench.log ./tests/physical.log ./tests/flux.log ./tests/symmetry ./tests/known_results.trs ./tests/flux ./tests/user-defined-material ./tests/Makefile ./tests/bragg_transmission.log ./tests/test-suite.log ./tests/pw-source-ll.o ./tests/user-defined-material.o ./tests/aniso_disp.o ./tests/flux.trs ./tests/ring-ll ./tests/two_dimensional.trs ./tests/.libs ./tests/.libs/h5test ./tests/.libs/symmetry ./tests/.libs/flux ./tests/.libs/user-defined-material ./tests/.libs/ring-ll ./tests/.libs/gdsII-3d ./tests/.libs/one_dimensional ./tests/.libs/stress_tensor ./tests/.libs/aniso_disp ./tests/.libs/absorber-1d-ll ./tests/.libs/bench ./tests/.libs/cyl-ellipsoid-ll ./tests/.libs/near2far ./tests/.libs/three_d ./tests/.libs/bragg_transmission ./tests/.libs/convergence_cyl_waveguide ./tests/.libs/integrate ./tests/.libs/bend-flux-ll ./tests/.libs/array-slice-ll ./tests/.libs/cylindrical ./tests/.libs/known_results ./tests/.libs/harmonics ./tests/.libs/array-metadata ./tests/.libs/pw-source-ll ./tests/.libs/two_dimensional ./tests/.libs/2D_convergence ./tests/.libs/physical ./tests/.libs/dft-fields ./tests/.libs/pml ./tests/two_dimensional.cpp ./tests/absorber-1d-ll.cpp ./tests/2D_convergence.cpp ./tests/Makefile.in ./tests/flux.o ./tests/cyl-ellipsoid.ctl ./tests/pw-source-ll.cpp ./tests/integrate.o ./tests/pml.cpp ./tests/gdsII-3d ./tests/array-slice-ll.o ./tests/bend-flux-ll.cpp ./tests/one_dimensional ./tests/convergence_cyl_waveguide.log ./tests/known_results.o ./tests/near2far.log ./tests/aniso_disp.cpp ./tests/h5test.trs ./tests/physical.cpp ./tests/pml.o ./tests/bench.o ./tests/cyl-ellipsoid-ll.o ./tests/stress_tensor ./tests/gdsII-3d.cpp ./tests/integrate.log ./tests/aniso_disp ./tests/cyl-ellipsoid-ll.cpp ./tests/absorber-1d-ll ./tests/user-defined-material.cpp ./tests/symmetry.cpp ./tests/harmonics.o ./tests/symmetry.log ./tests/array-slice-ll-ref.h5 ./tests/symmetry.trs ./tests/absorber-1d-ll.o ./tests/stress_tensor.log ./tests/aniso_disp.log ./tests/cyl-ellipsoid-eps-ref.h5 ./tests/bench ./tests/h5test.cpp ./tests/cyl-ellipsoid-ll ./tests/near2far.o ./tests/convergence_cyl_waveguide.o ./tests/three_d.trs ./tests/three_d.log ./tests/flux.cpp ./tests/2D_convergence.log ./tests/integrate.trs ./tests/cylindrical.log ./tests/stress_tensor.cpp ./tests/pml.log ./tests/convergence_cyl_waveguide.cpp ./tests/near2far ./tests/three_d ./tests/bragg_transmission ./tests/known_results.cpp ./tests/bragg_transmission.trs ./tests/convergence_cyl_waveguide ./tests/three_d.cpp ./tests/integrate ./tests/array-slice-ll.cpp ./tests/dft-fields.cpp ./tests/bend-flux-ll ./tests/cylindrical.cpp ./tests/array-slice-ll ./tests/bench.trs ./tests/cylindrical ./tests/stress_tensor.o ./tests/known_results ./tests/one_dimensional.o ./tests/2D_convergence.trs ./tests/harmonics ./tests/h5test.o ./tests/near2far.trs ./tests/array-metadata ./tests/bragg_transmission.o ./tests/harmonics.log ./tests/pw-source-ll ./tests/harmonics.trs ./tests/pml.trs ./tests/ring-ll.cpp ./tests/gdsII-3d.gds ./tests/bend-flux-ll.o ./tests/Makefile.am ./tests/h5test.log ./tests/stress_tensor.trs ./tests/physical.o ./tests/dft-fields.o ./tests/bragg_transmission.cpp ./tests/two_dimensional.o ./tests/two_dimensional ./tests/gdsII-3d.o ./tests/convergence_cyl_waveguide.trs ./tests/2D_convergence ./tests/bench.cpp ./tests/one_dimensional.cpp ./tests/three_d.o ./tests/two_dimensional.log ./tests/physical.trs ./tests/physical ./tests/one_dimensional.trs ./tests/integrate.cpp ./tests/cylindrical.o ./tests/dft-fields ./tests/pml ./tests/symmetry.o ./Makefile.am ./.gitignore ./.gitattributes ./config.log ./index.md ./m4 ./m4/ax_gcc_x86_cpuid.m4 ./m4/ltversion.m4 ./m4/ltoptions.m4 ./m4/acx_blas.m4 ./m4/ax_cxx_maxopt.m4 ./m4/ax_openmp.m4 ./m4/ax_compiler_vendor.m4 ./m4/ax_gcc_archflag.m4 ./m4/lt~obsolete.m4 ./m4/acx_lapack.m4 ./m4/pkg.m4 ./m4/ltsugar.m4 ./m4/libtool.m4 ./m4/ax_check_compiler_flags.m4 ./m4/acx_mpi.m4 ./autom4te.cache ./autom4te.cache/traces.1 ./autom4te.cache/requests ./autom4te.cache/traces.0 ./autom4te.cache/output.0 ./autom4te.cache/output.2 ./autom4te.cache/traces.2 ./autom4te.cache/output.1 ./config.h.in ./.mailmap ./ltmain.sh ./libtool rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyc rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyo rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.a rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.la rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyc rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyo rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.a rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.la rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/__pycache__/ rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/adjoint/__pycache__/ make[1]: Leaving directory '/build/meep-mpi-default-1.17.1' dh_install dh_installdocs dh_installchangelogs dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/lib/arm-linux-gnueabihf/libmeep.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libmeep-mpi-default-dev (4), libmeep-mpi-default23 (3), meep-mpi-default (1), python3-meep-mpi-default (1) * dh_installdocs: libmeep-mpi-default-dev (0), libmeep-mpi-default23 (0), meep-mpi-default (1), python3-meep-mpi-default (0) * dh_installman: libmeep-mpi-default-dev (0), libmeep-mpi-default23 (0), meep-mpi-default (1), python3-meep-mpi-default (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "arm-linux-gnueabihf", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: debian/python3-meep-mpi-default/usr/lib/python3/dist-packages/meep/_meep.so.23.0.1 contains an unresolvable reference to symbol PyBytes_AsStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 109 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/meep-mpi-default/usr/bin/meep contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libmeep-mpi-default23/usr/lib/arm-linux-gnueabihf/libmeep.so.23.0.1 found in none of the libraries dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'meep-mpi-default' in '../meep-mpi-default_1.17.1-2_armhf.deb'. dpkg-deb: building package 'libmeep-mpi-default-dev' in '../libmeep-mpi-default-dev_1.17.1-2_armhf.deb'. dpkg-deb: building package 'libmeep-mpi-default23' in '../libmeep-mpi-default23_1.17.1-2_armhf.deb'. dpkg-deb: building package 'python3-meep-mpi-default-dbgsym' in '../python3-meep-mpi-default-dbgsym_1.17.1-2_armhf.deb'. dpkg-deb: building package 'meep-mpi-default-dbgsym' in '../meep-mpi-default-dbgsym_1.17.1-2_armhf.deb'. dpkg-deb: building package 'libmeep-mpi-default23-dbgsym' in '../libmeep-mpi-default23-dbgsym_1.17.1-2_armhf.deb'. dpkg-deb: building package 'python3-meep-mpi-default' in '../python3-meep-mpi-default_1.17.1-2_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../meep-mpi-default_1.17.1-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/14541/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/14541/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/14541 and its subdirectories I: Current time: Sat Jul 24 12:41:56 +14 2021 I: pbuilder-time-stamp: 1627080116