I: pbuilder: network access will be disabled during build I: Current time: Sun Jan 7 02:23:11 +14 2024 I: pbuilder-time-stamp: 1704543791 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [lmfit-py_1.0.1-6.dsc] I: copying [./lmfit-py_1.0.1.orig.tar.gz] I: copying [./lmfit-py_1.0.1-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.auQ_gqXz/trustedkeys.kbx': General error gpgv: Signature made Thu May 6 08:51:21 2021 gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./lmfit-py_1.0.1-6.dsc dpkg-source: info: extracting lmfit-py in lmfit-py-1.0.1 dpkg-source: info: unpacking lmfit-py_1.0.1.orig.tar.gz dpkg-source: info: unpacking lmfit-py_1.0.1-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deactivate_test.patch dpkg-source: info: applying no_jupyter_sphinx.execute.patch dpkg-source: info: applying fake_README.txt.patch dpkg-source: info: applying exclude_failing_test.patch dpkg-source: info: applying python3.9.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 6 12:23 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' DIRSTACK=() DISTRIBUTION=bullseye EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=e5e7024b453a41c2a68e18eae8fc7cdf LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2145583 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TWjKzHcd/pbuilderrc_F2Bv --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TWjKzHcd/b2 --logfile b2/build.log lmfit-py_1.0.1-6.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 24 2020 date -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd -rwxr-xr-x 1 root root 93936 Sep 24 2020 df -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir -rwxr-xr-x 1 root root 84440 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 7 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 7 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep -rwxr-xr-x 1 root root 39680 Sep 24 2020 false -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 69032 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 98048 Apr 10 2022 gzip -rwxr-xr-x 1 root root 22600 Nov 7 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls -rwxr-xr-x 1 root root 149736 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp -rwxr-xr-x 1 root root 59632 Jan 20 2022 more -rwsr-xr-x 1 root root 55528 Jan 20 2022 mount -rwxr-xr-x 1 root root 18664 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv lrwxrwxrwx 1 root root 8 Nov 7 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 9 Jan 6 12:23 sh -> /bin/bash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jan 20 2022 su -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch -rwxr-xr-x 1 root root 39680 Sep 24 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jan 20 2022 umount -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir -rwxr-xr-x 1 root root 63744 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 7 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-python, python3-all, python3-asteval (>= 0.9.16), python3-ipython, python3-numpy, python3-pandas, python3-pytest, python3-scipy, python3-setuptools, python3-sphinx, python3-sphinx-gallery, python3-uncertainties (>= 3.0.2.github~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 17743 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-asteval (>= 0.9.16); however: Package python3-asteval is not installed. pbuilder-satisfydepends-dummy depends on python3-ipython; however: Package python3-ipython is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-gallery; however: Package python3-sphinx-gallery is not installed. pbuilder-satisfydepends-dummy depends on python3-uncertainties (>= 3.0.2.github~); however: Package python3-uncertainties is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfreetype6{a} libgfortran5{a} libicu67{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmpdec3{a} libpipeline1{a} libpng16-16{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtiff5{a} libtool{a} libuchardet0{a} libwebp6{a} libwebpdemux2{a} libwebpmux3{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} m4{a} mailcap{a} man-db{a} media-types{a} mime-support{a} openssl{a} po-debconf{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-asteval{a} python3-attr{a} python3-babel{a} python3-backcall{a} python3-certifi{a} python3-chardet{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-distutils{a} python3-docutils{a} python3-future{a} python3-idna{a} python3-imagesize{a} python3-importlib-metadata{a} python3-iniconfig{a} python3-ipython{a} python3-ipython-genutils{a} python3-jedi{a} python3-jinja2{a} python3-kiwisolver{a} python3-lib2to3{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-pexpect{a} python3-pickleshare{a} python3-pil{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-py{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-gallery{a} python3-toml{a} python3-traitlets{a} python3-tz{a} python3-uncertainties{a} python3-urllib3{a} python3-wcwidth{a} python3-zipp{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} ttf-bitstream-vera{a} tzdata{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl libpaper-utils lynx optipng python3-bottleneck python3-bs4 python3-html5lib python3-lxml python3-numba python3-numexpr python3-odf python3-olefile python3-openpyxl python3-tables python3-tk python3-xlwt wget 0 packages upgraded, 140 newly installed, 0 to remove and 0 not upgraded. Need to get 73.0 MB of archives. After unpacking 300 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8+deb11u1 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 mailcap all 3.69 [31.7 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 mime-support all 3.66 [10.9 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 tzdata all 2021a-1+deb11u10 [286 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 sgml-base all 1.30 [15.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1w-0+deb11u1 [859 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20210119 [158 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3+deb11u1 [273 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3+deb11u1 [128 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3+deb11u1 [69.2 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 python3-distutils all 3.9.2-1 [143 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 xml-core all 0.18+nmu1 [23.8 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 docutils-common all 0.16+dfsg-4 [129 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 fonts-lyx all 2.3.6-1 [205 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3+deb11u1 [153 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1+deb11u1 [108 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get: 61 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1+deb11u1 [418 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 libimagequant0 amd64 2.12.2-1.1 [32.5 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 66 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get: 67 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 68 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8+deb11u1 [232 kB] Get: 69 http://deb.debian.org/debian bullseye/main amd64 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 70 http://deb.debian.org/debian bullseye/main amd64 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 71 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3+deb11u1 [2166 kB] Get: 72 http://deb.debian.org/debian bullseye/main amd64 liblbfgsb0 amd64 3.0+dfsg.3-9 [28.5 kB] Get: 73 http://deb.debian.org/debian bullseye/main amd64 liblcms2-2 amd64 2.12~rc1-2 [150 kB] Get: 74 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1+deb11u2 [259 kB] Get: 75 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u4 [290 kB] Get: 76 http://deb.debian.org/debian bullseye/main amd64 libwebpdemux2 amd64 0.6.1-2.1+deb11u2 [87.8 kB] Get: 77 http://deb.debian.org/debian bullseye/main amd64 libwebpmux3 amd64 0.6.1-2.1+deb11u2 [97.7 kB] Get: 78 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 79 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 80 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get: 81 http://deb.debian.org/debian bullseye/main amd64 python-babel-localedata all 2.8.0+dfsg.1-7 [4997 kB] Get: 82 http://deb.debian.org/debian bullseye/main amd64 ttf-bitstream-vera all 1.10-8.1 [223 kB] Get: 83 http://deb.debian.org/debian bullseye/main amd64 python-matplotlib-data all 3.3.4-1 [4153 kB] Get: 84 http://deb.debian.org/debian bullseye/main amd64 python3-alabaster all 0.7.8-1.1 [18.6 kB] Get: 85 http://deb.debian.org/debian bullseye/main amd64 python3-all amd64 3.9.2-3 [1056 B] Get: 86 http://deb.debian.org/debian bullseye/main amd64 python3-asteval all 0.9.19-2 [17.4 kB] Get: 87 http://deb.debian.org/debian bullseye/main amd64 python3-attr all 20.3.0-1 [52.9 kB] Get: 88 http://deb.debian.org/debian bullseye/main amd64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 89 http://deb.debian.org/debian bullseye/main amd64 python3-tz all 2021.1-1 [34.8 kB] Get: 90 http://deb.debian.org/debian bullseye/main amd64 python3-babel all 2.8.0+dfsg.1-7 [100 kB] Get: 91 http://deb.debian.org/debian bullseye/main amd64 python3-backcall all 0.2.0-1 [10.7 kB] Get: 92 http://deb.debian.org/debian bullseye/main amd64 python3-certifi all 2020.6.20-1 [151 kB] Get: 93 http://deb.debian.org/debian bullseye/main amd64 python3-chardet all 4.0.0-1 [99.0 kB] Get: 94 http://deb.debian.org/debian bullseye/main amd64 python3-six all 1.16.0-2 [17.5 kB] Get: 95 http://deb.debian.org/debian bullseye/main amd64 python3-cycler all 0.10.0-3 [8084 B] Get: 96 http://deb.debian.org/debian bullseye/main amd64 python3-dateutil all 2.8.1-6 [79.2 kB] Get: 97 http://deb.debian.org/debian bullseye/main amd64 python3-decorator all 4.4.2-2 [15.8 kB] Get: 98 http://deb.debian.org/debian bullseye/main amd64 python3-roman all 2.0.0-5 [9064 B] Get: 99 http://deb.debian.org/debian bullseye/main amd64 python3-docutils all 0.16+dfsg-4 [384 kB] Get: 100 http://deb.debian.org/debian bullseye/main amd64 python3-future all 0.18.2-5 [349 kB] Get: 101 http://deb.debian.org/debian bullseye/main amd64 python3-idna all 2.10-1 [37.4 kB] Get: 102 http://deb.debian.org/debian bullseye/main amd64 python3-imagesize all 1.2.0-2 [5824 B] Get: 103 http://deb.debian.org/debian bullseye/main amd64 python3-more-itertools all 4.2.0-3 [42.7 kB] Get: 104 http://deb.debian.org/debian bullseye/main amd64 python3-zipp all 1.0.0-3 [6060 B] Get: 105 http://deb.debian.org/debian bullseye/main amd64 python3-importlib-metadata all 1.6.0-2 [10.3 kB] Get: 106 http://deb.debian.org/debian bullseye/main amd64 python3-iniconfig all 1.1.1-1 [6308 B] Get: 107 http://deb.debian.org/debian bullseye/main amd64 python3-parso all 0.8.1-1 [65.9 kB] Get: 108 http://deb.debian.org/debian bullseye/main amd64 python3-jedi all 0.18.0-1 [620 kB] Get: 109 http://deb.debian.org/debian bullseye/main amd64 python3-ptyprocess all 0.7.0-1 [13.6 kB] Get: 110 http://deb.debian.org/debian bullseye/main amd64 python3-pexpect all 4.8.0-2 [54.9 kB] Get: 111 http://deb.debian.org/debian bullseye/main amd64 python3-pickleshare all 0.7.5-3 [7604 B] Get: 112 http://deb.debian.org/debian bullseye/main amd64 python3-wcwidth all 0.1.9+dfsg1-2 [18.2 kB] Get: 113 http://deb.debian.org/debian bullseye/main amd64 python3-prompt-toolkit all 3.0.14-1 [258 kB] Get: 114 http://deb.debian.org/debian bullseye/main amd64 python3-pygments all 2.7.1+dfsg-2.1 [657 kB] Get: 115 http://deb.debian.org/debian bullseye/main amd64 python3-ipython-genutils all 0.2.0-4 [21.4 kB] Get: 116 http://deb.debian.org/debian bullseye/main amd64 python3-traitlets all 5.0.5-1 [84.4 kB] Get: 117 http://deb.debian.org/debian bullseye/main amd64 python3-ipython all 7.20.0-1+deb11u1 [517 kB] Get: 118 http://deb.debian.org/debian bullseye/main amd64 python3-markupsafe amd64 1.1.1-1+b3 [15.2 kB] Get: 119 http://deb.debian.org/debian bullseye/main amd64 python3-jinja2 all 2.11.3-1 [114 kB] Get: 120 http://deb.debian.org/debian bullseye/main amd64 python3-kiwisolver amd64 1.3.1-1+b1 [55.7 kB] Get: 121 http://deb.debian.org/debian bullseye/main amd64 python3-pyparsing all 2.4.7-1 [109 kB] Get: 122 http://deb.debian.org/debian bullseye/main amd64 python3-numpy amd64 1:1.19.5-1 [2693 kB] Get: 123 http://deb.debian.org/debian bullseye/main amd64 python3-pil amd64 8.1.2+dfsg-0.3+deb11u1 [445 kB] Get: 124 http://deb.debian.org/debian bullseye/main amd64 python3-matplotlib amd64 3.3.4-1 [4163 kB] Get: 125 http://deb.debian.org/debian bullseye/main amd64 python3-packaging all 20.9-2 [33.5 kB] Get: 126 http://deb.debian.org/debian bullseye/main amd64 python3-pandas-lib amd64 1.1.5+dfsg-2 [3287 kB] Get: 127 http://deb.debian.org/debian bullseye/main amd64 python3-pandas all 1.1.5+dfsg-2 [2096 kB] Get: 128 http://deb.debian.org/debian bullseye/main amd64 python3-pluggy all 0.13.0-6 [22.3 kB] Get: 129 http://deb.debian.org/debian bullseye/main amd64 python3-py all 1.10.0-1 [94.2 kB] Get: 130 http://deb.debian.org/debian bullseye/main amd64 python3-toml all 0.10.1-1 [15.9 kB] Get: 131 http://deb.debian.org/debian bullseye/main amd64 python3-pytest all 6.0.2-2 [211 kB] Get: 132 http://deb.debian.org/debian bullseye/main amd64 python3-urllib3 all 1.26.5-1~exp1 [114 kB] Get: 133 http://deb.debian.org/debian bullseye/main amd64 python3-requests all 2.25.1+dfsg-2 [69.3 kB] Get: 134 http://deb.debian.org/debian bullseye/main amd64 python3-scipy amd64 1.6.0-2 [12.3 MB] Get: 135 http://deb.debian.org/debian bullseye/main amd64 python3-setuptools all 52.0.0-4 [366 kB] Get: 136 http://deb.debian.org/debian bullseye/main amd64 python3-snowballstemmer all 2.1.0-1 [58.7 kB] Get: 137 http://deb.debian.org/debian bullseye/main amd64 sphinx-common all 3.4.3-2 [578 kB] Get: 138 http://deb.debian.org/debian bullseye/main amd64 python3-sphinx all 3.4.3-2 [545 kB] Get: 139 http://deb.debian.org/debian bullseye/main amd64 python3-sphinx-gallery all 0.8.2-1 [113 kB] Get: 140 http://deb.debian.org/debian bullseye/main amd64 python3-uncertainties all 3.1.5-1 [78.8 kB] Fetched 73.0 MB in 17s (4175 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17743 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8+deb11u1_amd64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../1-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. 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Setting up libexpat1:amd64 (2.2.10-2+deb11u5) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18610 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../02-mailcap_3.69_all.deb ... Unpacking mailcap (3.69) ... Selecting previously unselected package mime-support. Preparing to unpack .../03-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package tzdata. Preparing to unpack .../04-tzdata_2021a-1+deb11u10_all.deb ... Unpacking tzdata (2021a-1+deb11u10) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../05-libmpdec3_2.5.1-1_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../07-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../08-libpython3.9-stdlib_3.9.2-1_amd64.deb ... Unpacking libpython3.9-stdlib:amd64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../09-python3.9_3.9.2-1_amd64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../10-libpython3-stdlib_3.9.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20917 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.30_all.deb ... Unpacking sgml-base (1.30) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package openssl. Preparing to unpack .../003-openssl_1.1.1w-0+deb11u1_amd64.deb ... Unpacking openssl (1.1.1w-0+deb11u1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../004-ca-certificates_20210119_all.deb ... Unpacking ca-certificates (20210119) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../006-libmagic1_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../009-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../012-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../013-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../014-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../015-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../016-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../017-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../018-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../019-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../020-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../021-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../022-libelf1_0.183-1_amd64.deb ... Unpacking libelf1:amd64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../023-dwz_0.13+20210201-1_amd64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../024-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../025-libxml2_2.9.10+dfsg-6.7+deb11u4_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7+deb11u4) ... Selecting previously unselected package gettext. Preparing to unpack .../026-gettext_0.21-4_amd64.deb ... Unpacking gettext (0.21-4) ... 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Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3+deb11u1) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up python-babel-localedata (2.8.0+dfsg.1-7) ... Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Jan 6 12:25:55 UTC 2024. Universal Time is now: Sat Jan 6 12:25:55 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up libimagequant0:amd64 (2.12.2-1.1) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Setting up libgfortran5:amd64 (10.2.1-6) ... 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Setting up liblapack3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up mime-support (3.66) ... Setting up libtool (2.4.6-15) ... Setting up libwebpdemux2:amd64 (0.6.1-2.1+deb11u2) ... Setting up libreadline8:amd64 (8.1-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up libjs-jquery-ui (1.12.1+dfsg-8+deb11u1) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up xml-core (0.18+nmu1) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.3-9) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up sphinx-common (3.4.3-2) ... Setting up python3.9 (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up python3-markupsafe (1.1.1-1+b3) ... Setting up python3-tz (2021.1-1) ... Setting up python3-six (1.16.0-2) ... Setting up python3-pil:amd64 (8.1.2+dfsg-0.3+deb11u1) ... Setting up python3-roman (2.0.0-5) ... Setting up python3-decorator (4.4.2-2) ... Setting up python3-jinja2 (2.11.3-1) ... Setting up python3-wcwidth (0.1.9+dfsg1-2) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up python3-certifi (2020.6.20-1) ... Setting up python3-snowballstemmer (2.1.0-1) ... Setting up python3-cycler (0.10.0-3) ... Setting up python3-kiwisolver (1.3.1-1+b1) ... Setting up python3-idna (2.10-1) ... Setting up python3-pickleshare (0.7.5-3) ... Setting up python3-toml (0.10.1-1) ... Setting up python3-urllib3 (1.26.5-1~exp1) ... Setting up python3-dateutil (2.8.1-6) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-imagesize (1.2.0-2) ... Setting up python3-ptyprocess (0.7.0-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-prompt-toolkit (3.0.14-1) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up python3-more-itertools (4.2.0-3) ... Setting up python3-iniconfig (1.1.1-1) ... Setting up python3-attr (20.3.0-1) ... Setting up python3-setuptools (52.0.0-4) ... Setting up python3-py (1.10.0-1) ... Setting up python3-backcall (0.2.0-1) ... Setting up python3-parso (0.8.1-1) ... Setting up python3-asteval (0.9.19-2) ... Setting up python3-babel (2.8.0+dfsg.1-7) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-ipython-genutils (0.2.0-4) ... Setting up python3-alabaster (0.7.8-1.1) ... Setting up python3-all (3.9.2-3) ... Setting up python3-zipp (1.0.0-3) ... Setting up python3-pygments (2.7.1+dfsg-2.1) ... Setting up python3-packaging (20.9-2) ... Setting up python3-chardet (4.0.0-1) ... Setting up python3-pexpect (4.8.0-2) ... Setting up python3-requests (2.25.1+dfsg-2) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-traitlets (5.0.5-1) ... Setting up python3-future (0.18.2-5) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python3-uncertainties (3.1.5-1) ... Setting up python3-matplotlib (3.3.4-1) ... Setting up python3-scipy (1.6.0-2) ... Setting up python3-importlib-metadata (1.6.0-2) ... Setting up python3-jedi (0.18.0-1) ... Setting up python3-pandas-lib:amd64 (1.1.5+dfsg-2) ... Setting up python3-pandas (1.1.5+dfsg-2) ... Setting up python3-ipython (7.20.0-1+deb11u1) ... Setting up python3-pluggy (0.13.0-6) ... Setting up python3-pytest (6.0.2-2) ... Processing triggers for libc-bin (2.31-13+deb11u6) ... Processing triggers for sgml-base (1.30) ... Setting up docutils-common (0.16+dfsg-4) ... Processing triggers for sgml-base (1.30) ... Setting up python3-docutils (0.16+dfsg-4) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python3-sphinx (3.4.3-2) ... Setting up python3-sphinx-gallery (0.8.2-1) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for bullseye I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/lmfit-py-1.0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lmfit-py_1.0.1-6_source.changes dpkg-buildpackage: info: source package lmfit-py dpkg-buildpackage: info: source version 1.0.1-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Graham Inggs dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean --test-pytest -i python{version} -p 3.9 I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-lmfit.substvars debian/python-lmfit-doc.substvars debian/files rm -fr -- debian/python3-lmfit/ debian/tmp/ debian/python-lmfit-doc/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure --test-pytest -i python{version} -p 3.9 I: pybuild base:232: python3.9 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build --test-pytest -i python{version} -p 3.9 I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/printfuncs.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/parameter.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/models.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/model.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/minimizer.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/lineshapes.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/jsonutils.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/confidence.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/_version.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/_ampgo.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit copying lmfit/__init__.py -> /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit UPDATING /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/_version.py set /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/_version.py to '1.0.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/lmfit-py-1.0.1' dh_auto_test pybuild --test --test-pytest -i python{version} -p 3.9 I: pybuild pybuild:284: cp -r NIST_STRD examples /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build I: pybuild base:232: cd /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build; python3.9 -m pytest -k 'not speed and not test_model_nan_policy' ============================= test session starts ============================== platform linux -- Python 3.9.2, pytest-6.0.2, py-1.10.0, pluggy-0.13.0 rootdir: /build/reproducible-path/lmfit-py-1.0.1 collected 525 items / 3 deselected / 522 selected tests/test_1variable.py . [ 0%] tests/test_NIST_Strd.py ........................... [ 5%] tests/test_algebraic_constraint.py .... [ 6%] tests/test_ampgo.py ............ [ 8%] tests/test_basicfit.py . [ 8%] tests/test_basinhopping.py ..... [ 9%] tests/test_bounded_jacobian.py . [ 9%] tests/test_bounds.py . [ 9%] tests/test_brute.py ............ [ 12%] tests/test_builtin_models.py ..... [ 13%] tests/test_confidence.py ............. [ 15%] tests/test_covariance_matrix.py ..ssssssss [ 17%] tests/test_custom_independentvar.py . [ 17%] tests/test_default_kws.py . [ 18%] tests/test_dual_annealing.py ... [ 18%] tests/test_itercb.py ....... [ 19%] tests/test_jsonutils.py ................ [ 22%] tests/test_least_squares.py ..... [ 23%] tests/test_lineshapes.py ............................................... [ 32%] ........................ [ 37%] tests/test_max_nfev.py ...x.................x.x... [ 42%] tests/test_minimizer.py . [ 42%] tests/test_model.py .................................................... [ 52%] ......................s....s.......................................... [ 66%] tests/test_model_uncertainties.py .... [ 67%] tests/test_multidatasets.py . [ 67%] tests/test_nose.py ...............s........ [ 71%] tests/test_pandas.py . [ 72%] tests/test_parameter.py ................................................ [ 81%] .......... [ 83%] tests/test_parameters.py ............................ [ 88%] tests/test_printfuncs.py ................................. [ 94%] tests/test_saveload.py .s.s.............. [ 98%] tests/test_shgo.py ....... [ 99%] tests/test_stepmodel.py .. [100%] =============================== warnings summary =============================== .pybuild/cpython3_3.9_lmfit/build/tests/test_lineshapes.py::test_no_ZeroDivisionError_and_finite_output[logistic] /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/lineshapes.py:184: RuntimeWarning: overflow encountered in exp return amplitude*(1. - 1./(1. + exp((x-center)/max(tiny, sigma)))) .pybuild/cpython3_3.9_lmfit/build/tests/test_lineshapes.py::test_no_ZeroDivisionError_and_finite_output[thermal_distribution] /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/lineshapes.py:344: RuntimeWarning: divide by zero encountered in true_divide return real(1/(amplitude*exp((x - center)/kt) + offset + tiny*1j)) .pybuild/cpython3_3.9_lmfit/build/tests/test_lineshapes.py::test_x_float_value[step] .pybuild/cpython3_3.9_lmfit/build/tests/test_lineshapes.py::test_x_float_value[rectangle] <__array_function__ internals>:5: DeprecationWarning: Calling nonzero on 0d arrays is deprecated, as it behaves surprisingly. Use `atleast_1d(cond).nonzero()` if the old behavior was intended. If the context of this warning is of the form `arr[nonzero(cond)]`, just use `arr[cond]`. .pybuild/cpython3_3.9_lmfit/build/tests/test_nose.py::CommonMinimizerTest::test_diffev_bounds_check /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/minimizer.py:933: RuntimeWarning: ignoring `maxiter` argument to `scalar_minimize()`. Use `max_nfev` instead. warnings.warn(MAXEVAL_Warning % ('maxiter', thisfuncname()), -- Docs: https://docs.pytest.org/en/stable/warnings.html = 506 passed, 13 skipped, 3 deselected, 3 xfailed, 5 warnings in 219.48s (0:03:39) = I: pybuild pybuild:310: rm -fr /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/NIST_STRD /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/examples; find /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build -name "*.sav" -delete make[1]: Leaving directory '/build/reproducible-path/lmfit-py-1.0.1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-lmfit.substvars debian/python-lmfit-doc.substvars rm -fr -- debian/.debhelper/generated/python3-lmfit/ debian/python3-lmfit/ debian/tmp/ debian/.debhelper/generated/python-lmfit-doc/ debian/python-lmfit-doc/ rm -f debian/python-lmfit-doc.debhelper.log debian/python3-lmfit.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/lmfit-py-1.0.1' dh_auto_install install -d /build/reproducible-path/lmfit-py-1.0.1/debian/tmp pybuild --install --test-pytest -i python{version} -p 3.9 --dest-dir /build/reproducible-path/lmfit-py-1.0.1/debian/tmp I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit running install running build running build_py UPDATING /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/_version.py set /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/_version.py to '1.0.1' running install_lib creating /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit creating /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr creating /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib creating /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9 creating /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages creating /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/_version.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit creating /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/_version.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/models.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/lineshapes.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/model.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/printfuncs.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/jsonutils.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/parameter.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/_ampgo.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/minimizer.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/confidence.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__pycache__ copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/__init__.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/_ampgo.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/confidence.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/jsonutils.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/lineshapes.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/minimizer.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/model.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/models.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/parameter.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit copying /build/reproducible-path/lmfit-py-1.0.1/.pybuild/cpython3_3.9_lmfit/build/lmfit/printfuncs.py -> /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/_version.py to _version.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/_ampgo.py to _ampgo.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/confidence.py to confidence.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/jsonutils.py to jsonutils.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/lineshapes.py to lineshapes.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/minimizer.py to minimizer.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/model.py to model.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/models.py to models.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/parameter.py to parameter.cpython-39.pyc byte-compiling /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit/printfuncs.py to printfuncs.cpython-39.pyc running install_egg_info running egg_info writing lmfit.egg-info/PKG-INFO writing dependency_links to lmfit.egg-info/dependency_links.txt writing requirements to lmfit.egg-info/requires.txt writing top-level names to lmfit.egg-info/top_level.txt reading manifest file 'lmfit.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.txt' warning: no previously-included files found matching '*.pyc' warning: no previously-included files found matching 'core.*' warning: no previously-included files found matching '*~' warning: no previously-included files found matching '*.pdf' warning: no files found matching '*.dat' under directory 'tests' warning: no previously-included files matching '*' found under directory 'examples/documentation' warning: no previously-included files matching '*' found under directory 'doc/_build' warning: no previously-included files matching '*' found under directory 'doc/examples' warning: no previously-included files matching '*.pdf' found under directory 'doc' warning: no previously-included files matching '*.csv' found under directory 'doc' warning: no previously-included files matching '*.dat' found under directory 'doc' warning: no previously-included files matching '*.sav' found under directory 'doc' writing manifest file 'lmfit.egg-info/SOURCES.txt' Copying lmfit.egg-info to /build/reproducible-path/lmfit-py-1.0.1/debian/python3-lmfit/usr/lib/python3.9/dist-packages/lmfit-1.0.1.egg-info Skipping SOURCES.txt running install_scripts dh_numpy3 (grep -a -s -v python3:Depends debian/python3-lmfit.substvars; echo python3:Depends=python3-numpy) > debian/python3-lmfit.substvars.new mv debian/python3-lmfit.substvars.new debian/python3-lmfit.substvars (grep -a -s -v python3:Depends debian/python-lmfit-doc.substvars; echo python3:Depends=python3-numpy) > debian/python-lmfit-doc.substvars.new mv debian/python-lmfit-doc.substvars.new debian/python-lmfit-doc.substvars make[1]: Leaving directory '/build/reproducible-path/lmfit-py-1.0.1' rm -f debian/python-lmfit-doc.debhelper.log debian/python3-lmfit.debhelper.log debian/rules override_dh_installdocs-indep make[1]: Entering directory '/build/reproducible-path/lmfit-py-1.0.1' PYTHONPATH=. http_proxy='localhost' python3 -m sphinx -N -bhtml -D mathjax_path="/usr/share/javascript/mathjax/MathJax.js" doc/ build/html # HTML generator Running Sphinx v3.4.3 Matplotlib created a temporary config/cache directory at /tmp/matplotlib-gvlo73td because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. making output directory... done loading intersphinx inventory from https://docs.python.org/3/objects.inv... loading intersphinx inventory from https://docs.scipy.org/doc/numpy/objects.inv... loading intersphinx inventory from https://docs.scipy.org/doc/scipy/reference/objects.inv... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://docs.scipy.org/doc/numpy/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.scipy.org', port=443): Max retries exceeded with url: /doc/numpy/objects.inv (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://docs.python.org/3/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.python.org', port=443): Max retries exceeded with url: /3/objects.inv (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://docs.scipy.org/doc/scipy/reference/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.scipy.org', port=443): Max retries exceeded with url: /doc/scipy/reference/objects.inv (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')) generating gallery... Using Sphinx-Gallery to convert rst text blocks to markdown for .ipynb files. generating gallery for examples... [ 6%] example_use_pandas.py generating gallery for examples... [ 13%] example_expression_model.py generating gallery for examples... [ 20%] example_fit_with_inequality.py generating gallery for examples... [ 26%] example_diffev.py generating gallery for examples... [ 33%] example_fit_with_bounds.py generating gallery for examples... [ 40%] example_reduce_fcn.py generating gallery for examples... [ 46%] example_fit_with_algebraic_constraint.py generating gallery for examples... [ 53%] example_fit_multi_datasets.py generating gallery for examples... [ 60%] example_fit_with_derivfunc.py generating gallery for examples... [ 66%] example_Model_interface.py generating gallery for examples... [ 73%] example_detect_outliers.py generating gallery for examples... [ 80%] example_confidence_interval.py generating gallery for examples... [ 86%] example_complex_resonator_model.py generating gallery for examples... [ 93%] lmfit_emcee_model_selection.py generating gallery for examples... [100%] example_brute.py computation time summary: - ../examples/example_confidence_interval.py: 262.00 sec 0.0 MB - ../examples/example_brute.py: 176.96 sec 0.0 MB - ../examples/example_detect_outliers.py: 10.88 sec 0.0 MB - ../examples/example_fit_multi_datasets.py: 2.23 sec 0.0 MB - ../examples/example_Model_interface.py: 2.12 sec 0.0 MB - ../examples/example_reduce_fcn.py: 1.83 sec 0.0 MB - ../examples/example_fit_with_algebraic_constraint.py: 1.77 sec 0.0 MB - ../examples/example_diffev.py: 1.50 sec 0.0 MB - ../examples/example_fit_with_bounds.py: 1.34 sec 0.0 MB - ../examples/example_use_pandas.py: 1.23 sec 0.0 MB - ../examples/example_fit_with_derivfunc.py: 1.14 sec 0.0 MB - ../examples/example_expression_model.py: 0.71 sec 0.0 MB - ../examples/example_complex_resonator_model.py: 0.43 sec 0.0 MB - ../examples/example_fit_with_inequality.py: 0.17 sec 0.0 MB - ../examples/lmfit_emcee_model_selection.py: 0.00 sec 0.0 MB building [mo]: targets for 0 po files that are out of date building [html]: targets for 14 source files that are out of date updating environment: [new config] 31 added, 0 changed, 0 removed reading sources... [ 3%] bounds reading sources... [ 6%] builtin_models reading sources... [ 9%] confidence reading sources... [ 12%] constraints reading sources... [ 16%] contents reading sources... [ 19%] examples/example_Model_interface reading sources... [ 22%] examples/example_brute reading sources... [ 25%] examples/example_complex_resonator_model reading sources... [ 29%] examples/example_confidence_interval reading sources... [ 32%] examples/example_detect_outliers reading sources... [ 35%] examples/example_diffev reading sources... [ 38%] examples/example_expression_model reading sources... [ 41%] examples/example_fit_multi_datasets reading sources... [ 45%] examples/example_fit_with_algebraic_constraint reading sources... [ 48%] examples/example_fit_with_bounds reading sources... [ 51%] examples/example_fit_with_derivfunc reading sources... [ 54%] examples/example_fit_with_inequality reading sources... [ 58%] examples/example_reduce_fcn reading sources... [ 61%] examples/example_use_pandas reading sources... [ 64%] examples/index reading sources... [ 67%] examples/lmfit_emcee_model_selection reading sources... [ 70%] examples/sg_execution_times reading sources... [ 74%] faq reading sources... [ 77%] fitting reading sources... [ 80%] index reading sources... [ 83%] installation reading sources... [ 87%] intro reading sources... [ 90%] model reading sources... [ 93%] parameters reading sources... [ 96%] support reading sources... [100%] whatsnew /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:306: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-output: from numpy import loadtxt from lmfit.models import GaussianModel data = loadtxt('test_peak.dat') x = data[:, 0] y = data[:, 1] mod = GaussianModel() pars = mod.guess(y, x=x) out = mod.fit(y, pars, x=x) print(out.fit_report(min_correl=0.25)) /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:326: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(out.fit_report(min_correl=0.25)) /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:337: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: import matplotlib as mpl mpl.rcParams['figure.dpi'] = 150 %matplotlib inline %config InlineBackend.figure_format = 'svg' import matplotlib.pyplot as plt plt.plot(x, y, 'b-') plt.plot(x, out.best_fit, 'r-', label='Gaussian Model') plt.legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:358: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: from lmfit.models import LorentzianModel mod = LorentzianModel() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:366: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: pars = mod.guess(y, x=x) out = mod.fit(y, pars, x=x) print(out.fit_report(min_correl=0.25)) /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:375: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: plt.plot(x, y, 'b-') plt.plot(x, out.best_fit, 'r-', label='Lorentzian Model') plt.legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:386: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: from lmfit.models import VoigtModel mod = VoigtModel() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:393: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: pars = mod.guess(y, x=x) out = mod.fit(y, pars, x=x) print(out.fit_report(min_correl=0.25)) /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:404: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: fig, axes = plt.subplots(1, 2, figsize=(12.8, 4.8)) axes[0].plot(x, y, 'b-') axes[0].plot(x, out.best_fit, 'r-', label='Voigt Model\ngamma constrained') axes[0].legend(loc='best') # free gamma parameter pars['gamma'].set(value=0.7, vary=True, expr='') out_gamma = mod.fit(y, pars, x=x) axes[1].plot(x, y, 'b-') axes[1].plot(x, out_gamma.best_fit, 'r-', label='Voigt Model\ngamma unconstrained') axes[1].legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:435: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(out_gamma.fit_report(min_correl=0.25)) /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:472: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_builtinmodels_stepmodel.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:483: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(out.fit_report()) /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:490: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: plt.plot(x, y, 'b') plt.plot(x, out.init_fit, 'k--', label='initial fit') plt.plot(x, out.best_fit, 'r-', label='best fit') plt.legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:513: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_builtinmodels_nistgauss.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:529: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(out.fit_report()) /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:540: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: fig, axes = plt.subplots(1, 2, figsize=(12.8, 4.8)) axes[0].plot(x, y, 'b') axes[0].plot(x, init, 'k--', label='initial fit') axes[0].plot(x, out.best_fit, 'r-', label='best fit') axes[0].legend(loc='best') comps = out.eval_components(x=x) axes[1].plot(x, y, 'b') axes[1].plot(x, comps['g1_'], 'g--', label='Gaussian component 1') axes[1].plot(x, comps['g2_'], 'm--', label='Gaussian component 2') axes[1].plot(x, comps['exp_'], 'k--', label='Exponential component') axes[1].legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:581: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_builtinmodels_nistgauss2.py :hide-code: :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:587: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: plt.plot(x, y, 'b') plt.plot(x, out.init_fit, 'k--', label='initial fit') plt.plot(x, out.best_fit, 'r-', label='best fit') plt.legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/builtin_models.rst:601: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(out.fit_report()) /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:45: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: import numpy as np import lmfit x = np.linspace(0.3, 10, 100) np.random.seed(0) y = 1/(0.1*x) + 2 + 0.1*np.random.randn(x.size) pars = lmfit.Parameters() pars.add_many(('a', 0.1), ('b', 1)) def residual(p): return 1/(p['a']*x) + p['b'] - y /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:66: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: mini = lmfit.Minimizer(residual, pars) result = mini.minimize() print(lmfit.fit_report(result.params)) /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:76: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ci = lmfit.conf_interval(mini, result) lmfit.printfuncs.report_ci(ci) /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:103: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: for p in result.params: result.params[p].stderr = abs(result.params[p].value * 0.1) /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:124: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: import warnings warnings.filterwarnings(action="ignore") import matplotlib as mpl import matplotlib.pyplot as plt mpl.rcParams['figure.dpi'] = 150 %matplotlib inline %config InlineBackend.figure_format = 'svg' /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:135: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_confidence_advanced.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:140: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: lmfit.report_fit(out2.params, min_correl=0.5) print('') lmfit.printfuncs.report_ci(ci) /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:157: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: fig, axes = plt.subplots(1, 2, figsize=(12.8, 4.8)) cx, cy, grid = lmfit.conf_interval2d(mini, out2, 'a1', 't2', 30, 30) ctp = axes[0].contourf(cx, cy, grid, np.linspace(0, 1, 11)) fig.colorbar(ctp, ax=axes[0]) axes[0].set_xlabel('a1') axes[0].set_ylabel('t2') cx, cy, grid = lmfit.conf_interval2d(mini, out2, 'a2', 't2', 30, 30) ctp = axes[1].contourf(cx, cy, grid, np.linspace(0, 1, 11)) fig.colorbar(ctp, ax=axes[1]) axes[1].set_xlabel('a2') axes[1].set_ylabel('t2') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:191: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-output: fig, axes = plt.subplots(1, 2, figsize=(12.8, 4.8)) cx1, cy1, prob = trace['a1']['a1'], trace['a1']['t2'], trace['a1']['prob'] cx2, cy2, prob2 = trace['t2']['t2'], trace['t2']['a1'], trace['t2']['prob'] axes[0].scatter(cx1, cy1, c=prob, s=30) axes[0].set_xlabel('a1') axes[0].set_ylabel('t2') axes[1].scatter(cx2, cy2, c=prob2, s=30) axes[1].set_xlabel('t2') axes[1].set_ylabel('a1') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/confidence.rst:210: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: fig, axes = plt.subplots(1, 2, figsize=(12.8, 4.8)) cx1, cy1, prob = trace['a1']['a1'], trace['a1']['t2'], trace['a1']['prob'] cx2, cy2, prob2 = trace['t2']['t2'], trace['t2']['a1'], trace['t2']['prob'] axes[0].scatter(cx1, cy1, c=prob, s=30) axes[0].set_xlabel('a1') axes[0].set_ylabel('t2') axes[1].scatter(cx2, cy2, c=prob2, s=30) axes[1].set_xlabel('t2') axes[1].set_ylabel('a1') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:414: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_fitting_withreport.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:419: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(fit_report(out)) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:428: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: print('-------------------------------') print('Parameter Value Stderr') for name, param in out.params.items(): print('{:7s} {:11.5f} {:11.5f}'.format(name, param.value, param.stderr)) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:536: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: import warnings warnings.filterwarnings(action="ignore") import matplotlib as mpl import matplotlib.pyplot as plt mpl.rcParams['figure.dpi'] = 150 %matplotlib inline %config InlineBackend.figure_format = 'svg' /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:549: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: import matplotlib.pyplot as plt import numpy as np import lmfit x = np.linspace(1, 10, 250) np.random.seed(0) y = 3.0 * np.exp(-x / 2) - 5.0 * np.exp(-(x - 0.1) / 10.) + 0.1 * np.random.randn(x.size) plt.plot(x, y, 'b') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:564: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: p = lmfit.Parameters() p.add_many(('a1', 4.), ('a2', 4.), ('t1', 3.), ('t2', 3., True)) def residual(p): v = p.valuesdict() return v['a1'] * np.exp(-x / v['t1']) + v['a2'] * np.exp(-(x - 0.1) / v['t2']) - y /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:578: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: mi = lmfit.minimize(residual, p, method='nelder', nan_policy='omit') lmfit.printfuncs.report_fit(mi.params, min_correl=0.5) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:585: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: plt.plot(x, y, 'b') plt.plot(x, residual(mi.params) + y, 'r', label='best fit') plt.legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:612: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: mi.params.add('__lnsigma', value=np.log(0.1), min=np.log(0.001), max=np.log(2)) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:619: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-output: res = lmfit.minimize(residual, method='emcee', nan_policy='omit', burn=300, steps=1000, thin=20, params=mi.params, is_weighted=False, progress=False) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:638: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: plt.plot(res.acceptance_fraction) plt.xlabel('walker') plt.ylabel('acceptance fraction') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:648: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: import corner emcee_plot = corner.corner(res.flatchain, labels=res.var_names, truths=list(res.params.valuesdict().values())) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:660: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: print('median of posterior probability distribution') print('--------------------------------------------') lmfit.report_fit(res.params) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:681: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: highest_prob = np.argmax(res.lnprob) hp_loc = np.unravel_index(highest_prob, res.lnprob.shape) mle_soln = res.chain[hp_loc] for i, par in enumerate(p): p[par].value = mle_soln[i] print('\nMaximum Likelihood Estimation from emcee ') print('-------------------------------------------------') print('Parameter MLE Value Median Value Uncertainty') fmt = ' {:5s} {:11.5f} {:11.5f} {:11.5f}'.format for name, param in p.items(): print(fmt(name, param.value, res.params[name].value, res.params[name].stderr)) /build/reproducible-path/lmfit-py-1.0.1/doc/fitting.rst:705: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: print('\nError Estimates from emcee ') print('------------------------------------------------------') print('Parameter -2sigma -1sigma median +1sigma +2sigma ') for name in p.keys(): quantiles = np.percentile(res.flatchain[name], [2.275, 15.865, 50, 84.135, 97.275]) median = quantiles[2] err_m2 = quantiles[0] - median err_m1 = quantiles[1] - median err_p1 = quantiles[3] - median err_p2 = quantiles[4] - median fmt = ' {:5s} {:8.4f} {:8.4f} {:8.4f} {:8.4f} {:8.4f}'.format print(fmt(name, err_m2, err_m1, median, err_p1, err_p2)) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:49: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: import matplotlib as mpl mpl.rcParams['figure.dpi'] = 150 %matplotlib inline %config InlineBackend.figure_format = 'svg' /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:57: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: from numpy import exp, linspace, random def gaussian(x, amp, cen, wid): return amp * exp(-(x-cen)**2 / wid) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:67: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: from scipy.optimize import curve_fit x = linspace(-10, 10, 101) y = gaussian(x, 2.33, 0.21, 1.51) + random.normal(0, 0.2, x.size) init_vals = [1, 0, 1] # for [amp, cen, wid] best_vals, covar = curve_fit(gaussian, x, y, p0=init_vals) print('best_vals: {}'.format(best_vals)) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:89: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: from lmfit import Model gmodel = Model(gaussian) print('parameter names: {}'.format(gmodel.param_names)) print('independent variables: {}'.format(gmodel.independent_vars)) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:157: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_gaussian.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:164: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(result.fit_report()) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:174: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: plt.plot(x, y, 'bo') plt.plot(x, result.init_fit, 'k--', label='initial fit') plt.plot(x, result.best_fit, 'r-', label='best fit') plt.legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:307: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: import numpy as np from lmfit import Model def decay(t, tau, N): return N*np.exp(-t/tau) decay_model = Model(decay) print('independent variables: {}'.format(decay_model.independent_vars)) params = decay_model.make_params() print('\nParameters:') for pname, par in params.items(): print(pname, par) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:332: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: decay_model = Model(decay, independent_vars=['tau']) print('independent variables: {}'.format(decay_model.independent_vars)) params = decay_model.make_params() print('\nParameters:') for pname, par in params.items(): print(pname, par) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:364: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: def decay2(t, tau, N=10, check_positive=False): if check_small: arg = abs(t)/max(1.e-9, abs(tau)) else: arg = t/tau return N*np.exp(arg) mod = Model(decay2) params = mod.make_params() print('Parameters:') for pname, par in params.items(): print(pname, par) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:400: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: def myfunc(x, amplitude=1, center=0, sigma=1): # function definition, for now just ``pass`` pass mod = Model(myfunc, prefix='f1_') params = mod.make_params() print('Parameters:') for pname, par in params.items(): print(pname, par) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:583: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_savemodel.py /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:587: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_loadmodel.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:792: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_gaussian.py :hide-output: :hide-code: /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:796: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-output: dely = result.eval_uncertainty(sigma=3) plt.fill_between(x, result.best_fit-dely, result.best_fit+dely, color="#ABABAB", label='3-$\sigma$ uncertainty band') /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:807: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: plt.plot(x, y, 'bo') plt.plot(x, result.init_fit, 'k--', label='initial fit') plt.plot(x, result.best_fit, 'r-', label='best fit') plt.fill_between(x, result.best_fit-dely, result.best_fit+dely, color="#ABABAB", label='3-$\sigma$ uncertainty band') plt.legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:846: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_savemodelresult.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:851: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_loadmodelresult.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:901: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_two_components.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:906: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(result.fit_report()) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:914: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: fig, axes = plt.subplots(1, 2, figsize=(12.8, 4.8)) axes[0].plot(x, y, 'bo') axes[0].plot(x, result.init_fit, 'k--', label='initial fit') axes[0].plot(x, result.best_fit, 'r-', label='best fit') axes[0].legend(loc='best') comps = result.eval_components() axes[1].plot(x, y, 'bo') axes[1].plot(x, comps['gaussian'], 'k--', label='Gaussian component') axes[1].plot(x, comps['line'], 'r--', label='Line component') axes[1].legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:999: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: ../examples/doc_model_composite.py :hide-output: /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:1004: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: print(result.fit_report()) /build/reproducible-path/lmfit-py-1.0.1/doc/model.rst:1011: WARNING: Unknown directive type "jupyter-execute". .. jupyter-execute:: :hide-code: fig, axes = plt.subplots(1, 2, figsize=(12.8, 4.8)) axes[0].plot(x, y, 'bo') axes[0].plot(x, result.init_fit, 'k--', label='initial fit') axes[0].plot(x, result.best_fit, 'r-', label='best fit') axes[0].legend(loc='best') axes[1].plot(x, y, 'bo') axes[1].plot(x, 10*comps['jump'], 'k--', label='Jump component') axes[1].plot(x, 10*comps['gaussian'], 'r-', label='Gaussian component') axes[1].legend(loc='best') plt.show() /build/reproducible-path/lmfit-py-1.0.1/doc/parameters.rst:91: WARNING: Unknown 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[100%] example_Model_interface.html dh_installdocs -i install -d debian/python3-lmfit/usr/share/doc/python3-lmfit install -d debian/.debhelper/generated/python3-lmfit install -p -m0644 debian/copyright debian/python3-lmfit/usr/share/doc/python3-lmfit/copyright install -d debian/python-lmfit-doc/usr/share/doc/python-lmfit-doc install -d debian/.debhelper/generated/python-lmfit-doc install -p -m0644 debian/copyright debian/python-lmfit-doc/usr/share/doc/python-lmfit-doc/copyright dh_installdocs build/html -p python-lmfit-doc --doc-main-package=python3-lmfit install -d debian/python-lmfit-doc/usr/share/doc/python3-lmfit cd 'build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/lmfit-py-1.0.1/debian/python-lmfit-doc/usr/share/doc/python3-lmfit chmod -R u\+rw,go=rX debian/python-lmfit-doc/usr/share/doc install -p -m0644 debian/copyright debian/python-lmfit-doc/usr/share/doc/python-lmfit-doc/copyright make[1]: Leaving directory '/build/reproducible-path/lmfit-py-1.0.1' dh_sphinxdoc -O--buildsystem=pybuild ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/language_data.js ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/doctools.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/searchtools.js ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/underscore.js ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/jquery.js rm -rf debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/.doctrees rm -f debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/.buildinfo (grep -a -s -v sphinxdoc:Depends debian/python-lmfit-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0)") > debian/python-lmfit-doc.substvars.new mv debian/python-lmfit-doc.substvars.new debian/python-lmfit-doc.substvars (grep -a -s -v sphinxdoc:Depends debian/python-lmfit-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python-lmfit-doc.substvars.new mv debian/python-lmfit-doc.substvars.new debian/python-lmfit-doc.substvars (grep -a -s -v sphinxdoc:Depends debian/python-lmfit-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python-lmfit-doc.substvars.new mv debian/python-lmfit-doc.substvars.new debian/python-lmfit-doc.substvars (grep -a -s -v sphinxdoc:Depends debian/python-lmfit-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.0), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python-lmfit-doc.substvars.new mv debian/python-lmfit-doc.substvars.new debian/python-lmfit-doc.substvars (grep -a -s -v sphinxdoc:Built-Using debian/python-lmfit-doc.substvars; echo "sphinxdoc:Built-Using=sphinx (= 3.4.3-2)") > debian/python-lmfit-doc.substvars.new mv debian/python-lmfit-doc.substvars.new debian/python-lmfit-doc.substvars dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python3-lmfit/usr/share/doc/python3-lmfit/changelog.Debian install -p -m0644 debian/changelog debian/python-lmfit-doc/usr/share/doc/python-lmfit-doc/changelog.Debian dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 4.20201102+nmu1 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.9 (default=3.9) D: dh_python3 debhelper:107: skipping package: python-lmfit-doc D: dh_python3 debhelper:152: source=lmfit-py, binary packages=['python3-lmfit'] D: dh_python3 dh_python3:183: processing package python3-lmfit... D: dh_python3 fs:49: moving files from debian/python3-lmfit/usr/lib/python3.9/dist-packages to debian/python3-lmfit/usr/lib/python3/dist-packages/ D: dh_python3 fs:260: package python3-lmfit details = {'requires.txt': {'debian/python3-lmfit/usr/lib/python3/dist-packages/lmfit-1.0.1.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-lmfit D: dh_python3 pydist:142: trying to find dependency for asteval>=0.9.16 (python=None) D: dh_python3 pydist:142: trying to find dependency for numpy>=1.16 (python=None) D: dh_python3 pydist:142: trying to find dependency for scipy>=1.2 (python=None) D: dh_python3 pydist:142: trying to find dependency for uncertainties>=3.0.1 (python=None) D: dh_python3 depends:275: D={'python3-scipy', 'python3:any', 'python3-numpy', 'python3-uncertainties (>= 3.0.2.github~)', 'python3-asteval'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild rm -f debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/language_data.js ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/language_data.js rm -f debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/doctools.js rm -f debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/searchtools.js rm -f debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/underscore.js ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/underscore.js rm -f debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/jquery.js ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/jquery.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1620289960 as canonical time Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_use_pandas_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_use_pandas_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_reduce_fcn_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_reduce_fcn_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/contents.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/broken_example.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_lmfit_emcee_model_selection_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_inequality_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_inequality_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_derivfunc_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_derivfunc_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/plus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/no_image.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/navigation.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_bounds_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_bounds_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_algebraic_constraint_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_with_algebraic_constraint_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_brute_002.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_brute_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_Model_interface_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_Model_interface_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_confidence_interval_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_complex_resonator_model_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_complex_resonator_model_003.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_complex_resonator_model_002.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_detect_outliers_002.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_detect_outliers_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_confidence_interval_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_confidence_interval_002.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_diffev_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_diffev_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_detect_outliers_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_detect_outliers_003.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_multi_datasets_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_fit_multi_datasets_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_expression_model_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_expression_model_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_complex_resonator_model_001.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_brute_thumb.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_brute_004.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_images/sphx_glr_example_brute_003.png using File::StripNondeterminism::handlers::png Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_downloads/fb625db3c50d423b1b7881136ffdeec8/examples_jupyter.zip using File::StripNondeterminism::handlers::zip Normalizing debian/python-lmfit-doc/usr/share/doc/python3-lmfit/html/_downloads/bc82bea3a5dd7bdba60b65220891d9e5/examples_python.zip using File::StripNondeterminism::handlers::zip dh_compress -O--buildsystem=pybuild cd debian/python-lmfit-doc cd debian/python3-lmfit chmod a-x usr/share/doc/python3-lmfit/changelog.Debian gzip -9nf usr/share/doc/python3-lmfit/changelog.Debian chmod a-x usr/share/doc/python-lmfit-doc/changelog.Debian usr/share/doc/python3-lmfit/html/_downloads/2c0316848a8a5e58fdf5c1bd1978018e/example_confidence_interval.ipynb usr/share/doc/python3-lmfit/html/_downloads/3805fc8171e8a0686d5cf65be55085ee/example_complex_resonator_model.py usr/share/doc/python3-lmfit/html/_downloads/3dcc7459227dbd4ba1982949be8491e1/example_complex_resonator_model.ipynb usr/share/doc/python3-lmfit/html/_downloads/8b2fe0a32f4790de5b0465c00682a37b/example_Model_interface.py usr/share/doc/python3-lmfit/html/_downloads/9074bca346e91d4783f1ebfda08595dd/lmfit_emcee_model_selection.ipynb usr/share/doc/python3-lmfit/html/_downloads/9254f2af7eef00978dc5823dc5418985/example_brute.ipynb usr/share/doc/python3-lmfit/html/_downloads/a4a9bd70fc277eac0b5a505f48c84a99/example_detect_outliers.ipynb usr/share/doc/python3-lmfit/html/_downloads/a69966d88009a9341e88bfe1935158a7/example_Model_interface.ipynb usr/share/doc/python3-lmfit/html/_downloads/c004866ac6395edd2609ff96cecdc255/example_brute.py usr/share/doc/python3-lmfit/html/_downloads/c5b1d1ce60f76e20b3312a2697eca7f1/lmfit_emcee_model_selection.py usr/share/doc/python3-lmfit/html/_downloads/e9797dfaa256c029a43c2a364328ed36/example_fit_multi_datasets.ipynb gzip -9nf usr/share/doc/python-lmfit-doc/changelog.Debian usr/share/doc/python3-lmfit/html/_downloads/2c0316848a8a5e58fdf5c1bd1978018e/example_confidence_interval.ipynb usr/share/doc/python3-lmfit/html/_downloads/3805fc8171e8a0686d5cf65be55085ee/example_complex_resonator_model.py usr/share/doc/python3-lmfit/html/_downloads/3dcc7459227dbd4ba1982949be8491e1/example_complex_resonator_model.ipynb usr/share/doc/python3-lmfit/html/_downloads/8b2fe0a32f4790de5b0465c00682a37b/example_Model_interface.py usr/share/doc/python3-lmfit/html/_downloads/9074bca346e91d4783f1ebfda08595dd/lmfit_emcee_model_selection.ipynb usr/share/doc/python3-lmfit/html/_downloads/9254f2af7eef00978dc5823dc5418985/example_brute.ipynb usr/share/doc/python3-lmfit/html/_downloads/a4a9bd70fc277eac0b5a505f48c84a99/example_detect_outliers.ipynb usr/share/doc/python3-lmfit/html/_downloads/a69966d88009a9341e88bfe1935158a7/example_Model_interface.ipynb usr/share/doc/python3-lmfit/html/_downloads/c004866ac6395edd2609ff96cecdc255/example_brute.py usr/share/doc/python3-lmfit/html/_downloads/c5b1d1ce60f76e20b3312a2697eca7f1/lmfit_emcee_model_selection.py usr/share/doc/python3-lmfit/html/_downloads/e9797dfaa256c029a43c2a364328ed36/example_fit_multi_datasets.ipynb cd '/build/reproducible-path/lmfit-py-1.0.1' cd '/build/reproducible-path/lmfit-py-1.0.1' dh_fixperms -O--buildsystem=pybuild find debian/python-lmfit-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-lmfit ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-lmfit-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-lmfit-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-lmfit/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-lmfit/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-lmfit/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-lmfit-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-lmfit -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-lmfit-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-lmfit/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -d debian/python3-lmfit/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-lmfit/DEBIAN/postinst cat debian/python3-lmfit.postinst.debhelper >> debian/python3-lmfit/DEBIAN/postinst chmod 0755 -- debian/python3-lmfit/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-lmfit/DEBIAN/prerm cat debian/python3-lmfit.prerm.debhelper >> debian/python3-lmfit/DEBIAN/prerm chmod 0755 -- debian/python3-lmfit/DEBIAN/prerm install -d debian/python-lmfit-doc/DEBIAN dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python3-lmfit.substvars echo misc:Pre-Depends= >> debian/python3-lmfit.substvars dpkg-gencontrol -ppython3-lmfit -ldebian/changelog -Tdebian/python3-lmfit.substvars -Pdebian/python3-lmfit echo misc:Depends= >> debian/python-lmfit-doc.substvars echo misc:Pre-Depends= >> debian/python-lmfit-doc.substvars dpkg-gencontrol -ppython-lmfit-doc -ldebian/changelog -Tdebian/python-lmfit-doc.substvars -Pdebian/python-lmfit-doc dpkg-gencontrol: warning: package python-lmfit-doc: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/python-lmfit-doc/DEBIAN/control chmod 0644 -- debian/python3-lmfit/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/python-lmfit-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-lmfit >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python-lmfit-doc/DEBIAN/md5sums chmod 0644 -- debian/python3-lmfit/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-lmfit .. dpkg-deb --root-owner-group --build debian/python-lmfit-doc .. dpkg-deb: building package 'python3-lmfit' in '../python3-lmfit_1.0.1-6_all.deb'. dpkg-deb: building package 'python-lmfit-doc' in '../python-lmfit-doc_1.0.1-6_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../lmfit-py_1.0.1-6_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2145583/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2145583 and its subdirectories I: Current time: Sun Jan 7 02:46:23 +14 2024 I: pbuilder-time-stamp: 1704545183