I: pbuilder: network access will be disabled during build I: Current time: Sun Dec 26 10:09:25 +14 2021 I: pbuilder-time-stamp: 1640462965 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cmtk_3.3.1p1+dfsg-2.dsc] I: copying [./cmtk_3.3.1p1+dfsg.orig.tar.xz] I: copying [./cmtk_3.3.1p1+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.Tj19_gpx/trustedkeys.kbx': General error gpgv: Signature made Tue Nov 12 02:17:21 2019 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./cmtk_3.3.1p1+dfsg-2.dsc dpkg-source: info: extracting cmtk in cmtk-3.3.1p1+dfsg dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg.orig.tar.xz dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep dpkg-source: info: applying reproducible_build dpkg-source: info: applying fix_cmake_version_comparison dpkg-source: info: applying dcmtk-3.6.1-compatibility I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3894293/tmp/hooks/D01_modify_environment starting debug: Running on ionos1-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3894293/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3894293/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=875fc16b55724c42b84b820d6632f16b LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3894293 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.pDty8viw2n/pbuilderrc_VSNs --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.pDty8viw2n/b2 --logfile b2/build.log cmtk_3.3.1p1+dfsg-2.dsc' SUDO_GID=110 SUDO_UID=105 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 5.10.0-10-amd64 #1 SMP Debian 5.10.84-1 (2021-12-08) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Aug 5 10:25 bash -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash -rwxr-xr-x 1 root root 113664 Sep 24 2020 date -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd -rwxr-xr-x 1 root root 93936 Sep 24 2020 df -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir -rwxr-xr-x 1 root root 84440 Jul 29 09:09 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 24 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 69032 Jul 29 09:09 findmnt -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe -rwxr-xr-x 1 root root 98048 Mar 3 2021 gzip -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln -rwxr-xr-x 1 root root 56952 Feb 8 2020 login -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls -rwxr-xr-x 1 root root 149736 Jul 29 09:09 lsblk -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp -rwxr-xr-x 1 root root 59632 Jul 29 09:09 more -rwsr-xr-x 1 root root 55528 Jul 29 09:09 mount -rwxr-xr-x 1 root root 18664 Jul 29 09:09 mountpoint -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd lrwxrwxrwx 1 root root 4 Aug 5 10:25 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Dec 26 10:09 sh -> bash lrwxrwxrwx 1 root root 4 Dec 21 23:25 sh.distrib -> dash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jul 29 09:09 su -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch -rwxr-xr-x 1 root root 39680 Sep 24 2020 true -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jul 29 09:09 umount -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir -rwxr-xr-x 1 root root 63744 Jul 29 09:09 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew I: user script /srv/workspace/pbuilder/3894293/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libmxml-dev; however: Package libmxml-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev | libz-dev; however: Package zlib1g-dev is not installed. Package libz-dev is not installed. pbuilder-satisfydepends-dummy depends on libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev; however: Package libdcmtk-dev is not installed. Package libdcmtk2-dev is not installed. Package libdcmtk1-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on liblzma-dev; however: Package liblzma-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on libtiff-dev | libtiff4-dev; however: Package libtiff-dev is not installed. Package libtiff4-dev is not installed. pbuilder-satisfydepends-dummy depends on libwrap0-dev; however: Package libwrap0-dev is not installed. pbuilder-satisfydepends-dummy depends on libcharls-dev | libdcmtk1-dev; however: Package libcharls-dev is not installed. Package libdcmtk1-dev is not installed. pbuilder-satisfydepends-dummy depends on libxml2-dev; however: Package libxml2-dev is not installed. pbuilder-satisfydepends-dummy depends on libssl-dev; however: Package libssl-dev is not installed. pbuilder-satisfydepends-dummy depends on xvfb; however: Package xvfb is not installed. pbuilder-satisfydepends-dummy depends on bc; however: Package bc is not installed. pbuilder-satisfydepends-dummy depends on dc; however: Package dc is not installed. pbuilder-satisfydepends-dummy depends on xauth; however: Package xauth is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bc{a} bsdextrautils{a} cmake{a} cmake-data{a} dc{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcharls-dev{a} libcharls2{a} libcurl4{a} libdcmtk-dev{a} libdcmtk15{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1{a} libexpat1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfontenc1{a} libfreetype6{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libice6{a} libicu-dev{a} libicu67{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp24{a} libldap-2.4-2{a} libllvm11{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmxml-dev{a} libmxml1{a} libncurses6{a} libnghttp2-14{a} libpciaccess0{a} libpipeline1{a} libpixman-1-0{a} libpng-dev{a} libpng16-16{a} libprocps8{a} libpsl5{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsigsegv2{a} libsm6{a} libsqlite3-dev{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libtiff-dev{a} libtiff5{a} libtiffxx5{a} libtool{a} libuchardet0{a} libunwind8{a} libuv1{a} libvulkan1{a} libwebp6{a} libwrap0{a} libwrap0-dev{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxfont2{a} libxkbfile1{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxmuu1{a} libxpm4{a} libxshmfence1{a} libxt6{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} procps{a} readline-common{a} sensible-utils{a} x11-common{a} x11-xkb-utils{a} xauth{a} xkb-data{a} xserver-common{a} xvfb{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libpng-tools libsasl2-modules lynx mesa-vulkan-drivers psmisc publicsuffix wget xfonts-base 0 packages upgraded, 147 newly installed, 0 to remove and 0 not upgraded. Need to get 102 MB of archives. After unpacking 409 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 libcharls2 amd64 2.2.0+dfsg-2 [79.4 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libcharls-dev amd64 2.2.0+dfsg-2 [24.4 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 libncurses6 amd64 6.2+20201114-2 [102 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 libprocps8 amd64 2:3.3.17-5 [63.9 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 procps amd64 2:3.3.17-5 [502 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 bc amd64 1.07.1-2+b2 [109 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 cmake-data all 3.18.4-2+deb11u1 [1725 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 libarchive13 amd64 3.4.3-2+b1 [343 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1 [69.1 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1 [106 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3 [232 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.9.0-2 [156 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 libcurl4 amd64 7.74.0-1.3+deb11u1 [341 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2 [96.9 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 libjsoncpp24 amd64 1.9.4-4 [78.9 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 librhash0 amd64 1.4.1-2 [129 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 libuv1 amd64 1.40.0-2 [132 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 cmake amd64 3.18.4-2+deb11u1 [5593 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 dc amd64 1.07.1-2+b2 [72.4 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 icu-devtools amd64 67.1-7 [201 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 libbz2-dev amd64 1.0.8-4 [30.1 kB] Get: 61 http://deb.debian.org/debian bullseye/main amd64 libicu-dev amd64 67.1-7 [9597 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 libxml2-dev amd64 2.9.10+dfsg-6.7 [791 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libssl-dev amd64 1.1.1k-1+deb11u1 [1810 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2 [190 kB] Get: 66 http://deb.debian.org/debian bullseye/main amd64 libpng-dev amd64 1.6.37-3 [298 kB] Get: 67 http://deb.debian.org/debian bullseye/main amd64 libwrap0 amd64 7.6.q-31 [59.0 kB] Get: 68 http://deb.debian.org/debian bullseye/main amd64 libwrap0-dev amd64 7.6.q-31 [21.5 kB] Get: 69 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 70 http://deb.debian.org/debian bullseye/main amd64 libjbig-dev amd64 2.1-3.1+b2 [30.5 kB] Get: 71 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get: 72 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo-dev amd64 1:2.0.6-4 [278 kB] Get: 73 http://deb.debian.org/debian bullseye/main amd64 libjpeg-dev amd64 1:2.0.6-4 [67.8 kB] Get: 74 http://deb.debian.org/debian bullseye/main amd64 liblzma-dev amd64 5.2.5-2 [229 kB] Get: 75 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get: 76 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1 [258 kB] Get: 77 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1 [289 kB] Get: 78 http://deb.debian.org/debian bullseye/main amd64 libtiffxx5 amd64 4.2.0-1 [128 kB] Get: 79 http://deb.debian.org/debian bullseye/main amd64 libdeflate-dev amd64 1.7-1 [46.9 kB] Get: 80 http://deb.debian.org/debian bullseye/main amd64 libtiff-dev amd64 4.2.0-1 [415 kB] Get: 81 http://deb.debian.org/debian bullseye/main amd64 libdcmtk15 amd64 3.6.5-1 [4657 kB] Get: 82 http://deb.debian.org/debian bullseye/main amd64 libdcmtk-dev amd64 3.6.5-1 [966 kB] Get: 83 http://deb.debian.org/debian bullseye/main amd64 libdrm-common all 2.4.104-1 [14.9 kB] Get: 84 http://deb.debian.org/debian bullseye/main amd64 libdrm2 amd64 2.4.104-1 [41.5 kB] Get: 85 http://deb.debian.org/debian bullseye/main amd64 libdrm-amdgpu1 amd64 2.4.104-1 [28.5 kB] Get: 86 http://deb.debian.org/debian bullseye/main amd64 libpciaccess0 amd64 0.16-1 [53.6 kB] Get: 87 http://deb.debian.org/debian bullseye/main amd64 libdrm-intel1 amd64 2.4.104-1 [71.8 kB] Get: 88 http://deb.debian.org/debian bullseye/main amd64 libdrm-nouveau2 amd64 2.4.104-1 [26.8 kB] Get: 89 http://deb.debian.org/debian bullseye/main amd64 libdrm-radeon1 amd64 2.4.104-1 [30.2 kB] Get: 90 http://deb.debian.org/debian bullseye/main amd64 libedit2 amd64 3.1-20191231-2+b1 [96.7 kB] Get: 91 http://deb.debian.org/debian bullseye/main amd64 libfftw3-double3 amd64 3.3.8-2 [733 kB] Get: 92 http://deb.debian.org/debian bullseye/main amd64 libfftw3-long3 amd64 3.3.8-2 [319 kB] Get: 93 http://deb.debian.org/debian bullseye/main amd64 libfftw3-quad3 amd64 3.3.8-2 [558 kB] Get: 94 http://deb.debian.org/debian bullseye/main amd64 libfftw3-single3 amd64 3.3.8-2 [762 kB] Get: 95 http://deb.debian.org/debian bullseye/main amd64 libfftw3-bin amd64 3.3.8-2 [50.7 kB] Get: 96 http://deb.debian.org/debian bullseye/main amd64 libfftw3-dev amd64 3.3.8-2 [2106 kB] Get: 97 http://deb.debian.org/debian bullseye/main amd64 libfontenc1 amd64 1:1.1.4-1 [24.3 kB] Get: 98 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1 [418 kB] Get: 99 http://deb.debian.org/debian bullseye/main amd64 libglapi-mesa amd64 20.3.5-1 [71.7 kB] Get: 100 http://deb.debian.org/debian bullseye/main amd64 libz3-4 amd64 4.8.10-1 [6949 kB] Get: 101 http://deb.debian.org/debian bullseye/main amd64 libllvm11 amd64 1:11.0.1-2 [17.9 MB] Get: 102 http://deb.debian.org/debian bullseye/main amd64 libsensors-config all 1:3.6.0-7 [32.3 kB] Get: 103 http://deb.debian.org/debian bullseye/main amd64 libsensors5 amd64 1:3.6.0-7 [52.3 kB] Get: 104 http://deb.debian.org/debian bullseye/main amd64 libvulkan1 amd64 1.2.162.0-1 [103 kB] Get: 105 http://deb.debian.org/debian bullseye/main amd64 libgl1-mesa-dri amd64 20.3.5-1 [9633 kB] Get: 106 http://deb.debian.org/debian bullseye/main amd64 libglvnd0 amd64 1.3.2-1 [53.6 kB] Get: 107 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 108 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 109 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get: 110 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.7.2-1 [311 kB] Get: 111 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.7.2-1 [772 kB] Get: 112 http://deb.debian.org/debian bullseye/main amd64 libx11-xcb1 amd64 2:1.7.2-1 [203 kB] Get: 113 http://deb.debian.org/debian bullseye/main amd64 libxcb-dri2-0 amd64 1.14-3 [103 kB] Get: 114 http://deb.debian.org/debian bullseye/main amd64 libxcb-dri3-0 amd64 1.14-3 [102 kB] Get: 115 http://deb.debian.org/debian bullseye/main amd64 libxcb-glx0 amd64 1.14-3 [118 kB] Get: 116 http://deb.debian.org/debian bullseye/main amd64 libxcb-present0 amd64 1.14-3 [101 kB] Get: 117 http://deb.debian.org/debian bullseye/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get: 118 http://deb.debian.org/debian bullseye/main amd64 libxcb-sync1 amd64 1.14-3 [105 kB] Get: 119 http://deb.debian.org/debian bullseye/main amd64 libxcb-xfixes0 amd64 1.14-3 [105 kB] Get: 120 http://deb.debian.org/debian bullseye/main amd64 libxdamage1 amd64 1:1.1.5-2 [15.7 kB] Get: 121 http://deb.debian.org/debian bullseye/main amd64 libxext6 amd64 2:1.3.3-1.1 [52.7 kB] Get: 122 http://deb.debian.org/debian bullseye/main amd64 libxfixes3 amd64 1:5.0.3-2 [22.1 kB] Get: 123 http://deb.debian.org/debian bullseye/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get: 124 http://deb.debian.org/debian bullseye/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get: 125 http://deb.debian.org/debian bullseye/main amd64 libglx-mesa0 amd64 20.3.5-1 [186 kB] Get: 126 http://deb.debian.org/debian bullseye/main amd64 x11-common all 1:7.7+22 [252 kB] Get: 127 http://deb.debian.org/debian bullseye/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get: 128 http://deb.debian.org/debian bullseye/main amd64 libmxml1 amd64 3.2-1 [29.7 kB] Get: 129 http://deb.debian.org/debian bullseye/main amd64 libmxml-dev amd64 3.2-1 [725 kB] Get: 130 http://deb.debian.org/debian bullseye/main amd64 libpixman-1-0 amd64 0.40.0-1 [543 kB] Get: 131 http://deb.debian.org/debian bullseye/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 132 http://deb.debian.org/debian bullseye/main amd64 libsqlite3-dev amd64 3.34.1-3 [963 kB] Get: 133 http://deb.debian.org/debian bullseye/main amd64 libunwind8 amd64 1.3.2-2 [54.5 kB] Get: 134 http://deb.debian.org/debian bullseye/main amd64 libxt6 amd64 1:1.2.0-1 [189 kB] Get: 135 http://deb.debian.org/debian bullseye/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get: 136 http://deb.debian.org/debian bullseye/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get: 137 http://deb.debian.org/debian bullseye/main amd64 libxaw7 amd64 2:1.0.13-1.1 [202 kB] Get: 138 http://deb.debian.org/debian bullseye/main amd64 libxfont2 amd64 1:2.0.4-1 [136 kB] Get: 139 http://deb.debian.org/debian bullseye/main amd64 libxkbfile1 amd64 1:1.1.0-1 [75.2 kB] Get: 140 http://deb.debian.org/debian bullseye/main amd64 libxmuu1 amd64 2:1.1.2-2+b3 [23.9 kB] Get: 141 http://deb.debian.org/debian bullseye/main amd64 x11-xkb-utils amd64 7.7+5 [163 kB] Get: 142 http://deb.debian.org/debian bullseye/main amd64 xauth amd64 1:1.1-1 [40.5 kB] Get: 143 http://deb.debian.org/debian bullseye/main amd64 xkb-data all 2.29-2 [655 kB] Get: 144 http://deb.debian.org/debian bullseye/main amd64 xserver-common all 2:1.20.11-1 [2283 kB] Get: 145 http://deb.debian.org/debian bullseye/main amd64 libglx0 amd64 1.3.2-1 [35.7 kB] Get: 146 http://deb.debian.org/debian bullseye/main amd64 libgl1 amd64 1.3.2-1 [89.5 kB] Get: 147 http://deb.debian.org/debian bullseye/main amd64 xvfb amd64 2:1.20.11-1 [3043 kB] Fetched 102 MB in 2s (61.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-8_amd64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libcharls2:amd64. Preparing to unpack .../005-libcharls2_2.2.0+dfsg-2_amd64.deb ... Unpacking libcharls2:amd64 (2.2.0+dfsg-2) ... Selecting previously unselected package libcharls-dev:amd64. Preparing to unpack .../006-libcharls-dev_2.2.0+dfsg-2_amd64.deb ... Unpacking libcharls-dev:amd64 (2.2.0+dfsg-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../007-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../008-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../009-libncurses6_6.2+20201114-2_amd64.deb ... Unpacking libncurses6:amd64 (6.2+20201114-2) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../010-libprocps8_2%3a3.3.17-5_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../011-procps_2%3a3.3.17-5_amd64.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../012-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../013-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../014-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../015-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../016-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../017-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../020-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../021-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../022-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package bc. Preparing to unpack .../023-bc_1.07.1-2+b2_amd64.deb ... Unpacking bc (1.07.1-2+b2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../024-cmake-data_3.18.4-2+deb11u1_all.deb ... Unpacking cmake-data (3.18.4-2+deb11u1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../025-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../026-libxml2_2.9.10+dfsg-6.7_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../027-libarchive13_3.4.3-2+b1_amd64.deb ... Unpacking libarchive13:amd64 (3.4.3-2+b1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../028-libbrotli1_1.0.9-2+b2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b2) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../029-libsasl2-modules-db_2.1.27+dfsg-2.1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../030-libsasl2-2_2.1.27+dfsg-2.1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../031-libldap-2.4-2_2.4.57+dfsg-3_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.57+dfsg-3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../032-libnghttp2-14_1.43.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.43.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../033-libpsl5_0.21.0-1.2_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../034-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../035-libssh2-1_1.9.0-2_amd64.deb ... Unpacking libssh2-1:amd64 (1.9.0-2) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../036-libcurl4_7.74.0-1.3+deb11u1_amd64.deb ... Unpacking libcurl4:amd64 (7.74.0-1.3+deb11u1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../037-libexpat1_2.2.10-2_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2) ... Selecting previously unselected package libjsoncpp24:amd64. Preparing to unpack .../038-libjsoncpp24_1.9.4-4_amd64.deb ... Unpacking libjsoncpp24:amd64 (1.9.4-4) ... 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Setting up libssh2-1:amd64 (1.9.0-2) ... Setting up cmake-data (3.18.4-2+deb11u1) ... Setting up libtiff5:amd64 (4.2.0-1) ... Setting up libbsd0:amd64 (0.11.3-1) ... Setting up libdeflate-dev:amd64 (1.7-1) ... Setting up libdrm-common (2.4.104-1) ... Setting up libelf1:amd64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libicu-dev:amd64 (67.1-7) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up libprocps8:amd64 (2:3.3.17-5) ... Setting up libtiffxx5:amd64 (4.2.0-1) ... Setting up libbz2-dev:amd64 (1.0.8-4) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libcharls-dev:amd64 (2.2.0+dfsg-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libxcb-xfixes0:amd64 (1.14-3) ... Setting up libmxml-dev:amd64 (3.2-1) ... Setting up libdcmtk15 (3.6.5-1) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:amd64 (3.4.3-2+b1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libxcb-glx0:amd64 (1.14-3) ... Setting up libedit2:amd64 (3.1-20191231-2+b1) ... Setting up libreadline8:amd64 (8.1-1) ... Setting up libpng-dev:amd64 (1.6.37-3) ... Setting up libjpeg-dev:amd64 (1:2.0.6-4) ... Setting up libjbig-dev:amd64 (2.1-3.1+b2) ... Setting up bc (1.07.1-2+b2) ... Setting up libldap-2.4-2:amd64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:amd64 (1.14-3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxcb-present0:amd64 (1.14-3) ... Setting up libxml2-dev:amd64 (2.9.10+dfsg-6.7) ... Setting up libllvm11:amd64 (1:11.0.1-2) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1) ... Setting up libtiff-dev:amd64 (4.2.0-1) ... Setting up libxcb-sync1:amd64 (1.14-3) ... Setting up autoconf (2.69-14) ... Setting up libxcb-dri2-0:amd64 (1.14-3) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libdrm2:amd64 (2.4.104-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up libcurl4:amd64 (7.74.0-1.3+deb11u1) ... Setting up libx11-6:amd64 (2:1.7.2-1) ... Setting up libxkbfile1:amd64 (1:1.1.0-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libxfont2:amd64 (1:2.0.4-1) ... Setting up libfftw3-dev:amd64 (3.3.8-2) ... Setting up libxmuu1:amd64 (2:1.1.2-2+b3) ... Setting up libdrm-amdgpu1:amd64 (2.4.104-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:amd64 (1.14-3) ... Setting up libx11-xcb1:amd64 (2:1.7.2-1) ... Setting up libdrm-nouveau2:amd64 (2.4.104-1) ... Setting up libxdamage1:amd64 (1:1.1.5-2) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libdcmtk-dev (3.6.5-1) ... Setting up libdrm-radeon1:amd64 (2.4.104-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libdrm-intel1:amd64 (2.4.104-1) ... Setting up libgl1-mesa-dri:amd64 (20.3.5-1) ... Setting up libxext6:amd64 (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up dh-autoreconf (20) ... Setting up libxfixes3:amd64 (1:5.0.3-2) ... Setting up libxt6:amd64 (1:1.2.0-1) ... Setting up xauth (1:1.1-1) ... Setting up cmake (3.18.4-2+deb11u1) ... Setting up libxmu6:amd64 (2:1.1.2-2+b3) ... Setting up libglx-mesa0:amd64 (20.3.5-1) ... Setting up libglx0:amd64 (1.3.2-1) ... Setting up debhelper (13.3.4) ... Setting up libxaw7:amd64 (2:1.0.13-1.1) ... Setting up libgl1:amd64 (1.3.2-1) ... Setting up x11-xkb-utils (7.7+5) ... Setting up xserver-common (2:1.20.11-1) ... Setting up xvfb (2:1.20.11-1) ... Processing triggers for libc-bin (2.31-13+deb11u2) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package hostname: Name or service not known I: Running cd /build/cmtk-3.3.1p1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cmtk_3.3.1p1+dfsg-2_source.changes dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1p1+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" debian/rules override_dh_auto_clean make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_clean rm -rf debian/manpages make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/cmtk.substvars debian/files rm -fr -- debian/cmtk/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_configure -- \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ -DBUILD_APPS:BOOL=ON \ -DBUILD_DOCUMENTATION:BOOL=OFF \ -DBUILD_GUI:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF \ -DCMTK_BUILD_DCMTK:BOOL=OFF \ -DCMTK_BUILD_MXML:BOOL=OFF \ -DCMTK_BUILD_NRRD:BOOL=ON \ -DCMTK_BUILD_SQLITE:BOOL=OFF \ -DCMTK_BUILD_ZLIB:BOOL=OFF \ -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ -DCMTK_USE_DCMTK:BOOL=ON \ -DCMTK_USE_FFTW:BOOL=ON \ -DCMTK_USE_QT:BOOL=OFF \ -DCMTK_USE_SMP:BOOL=ON \ -DCMTK_USE_SQLITE:BOOL=ON \ -DDART_TESTING_TIMEOUT:STRING=15000 \ -DMXML_INCLUDE_DIR:PATH=/usr/include \ -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DCMTK_BUILD_WRAPPER:BOOL=ON \ install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=OFF -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Looking for limits.h -- Looking for limits.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for include files sys/types.h, sys/prctl.h -- Looking for include files sys/types.h, sys/prctl.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Could NOT find X11 (missing: X11_X11_INCLUDE_PATH X11_X11_LIB) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Check for STD namespace -- Check for STD namespace - found -- Check for ANSI scope -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found -- System is Linux-5.10.0-10-amd64 -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h -- Looking for include file execinfo.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file termios.h -- Looking for include file termios.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file sys/ioctl.h -- Looking for include file sys/ioctl.h - found -- Looking for include file sys/procfs.h -- Looking for include file sys/procfs.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/utsname.h -- Looking for include file sys/utsname.h - found -- Check size of ((struct stat*)0)->st_mode -- Check size of ((struct stat*)0)->st_mode - done -- Check size of struct stat64 -- Check size of struct stat64 - failed -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Looking for C++ include unordered_map -- Looking for C++ include unordered_map - found -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Looking for include file dispatch/dispatch.h -- Looking for include file dispatch/dispatch.h - not found -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Using system zlib -- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0) -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found system libbz2 -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) -- Found DCMTK: /usr/include/dcmtk/config -- - tested library png -- - tested library tiff -- - tested library CharLS -- Using system DCMTK library. -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so -- Using system sqlite3 library -- Check size of long long -- Check size of long long - done -- Looking for strdup -- Looking for strdup - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for vsnprintf -- Looking for vsnprintf - found CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES): Policy CMP0033 is not set: The export_library_dependencies command should not be called. Run "cmake --help-policy CMP0033" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_DOCUMENTATION CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR DART_TESTING_TIMEOUT -- Build files have been written to: /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_build cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/cmtk-3.3.1p1+dfsg -B/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend.internal". Scanning dependencies of target cmtkMxml make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target NrrdIO make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target cmtkNumerics [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-attr.c make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-entity.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-index.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/comment.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/comment.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-private.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-get.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enumsNrrd.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-set.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/mop.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/mop.c [ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ap.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/string.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/string.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-file.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-node.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/754.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-search.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/defaultsNrrd.c [ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-string.c [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bdsvd.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseAir.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/dio.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/format.c [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bidiagonal.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseNrrd.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatEPS.c [ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/blas.cxx [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encoding.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatNRRD.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingAscii.c [ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/cholesky.cxx [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNG.c [ 6%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/det.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingBzip2.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNM.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/accessors.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingGzip.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatText.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/array.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingHex.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatVTK.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/arraysNrrd.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/read.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingRaw.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/gzio.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/gammaf.cxx [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/write.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/reorder.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/axis.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hessenberg.cxx [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianAir.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hsschur.cxx [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ibetaf.cxx [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/keyvalue.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lbfgsb.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffbiff.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lq.cxx [ 11%] Linking C shared library ../../bin/libcmtkMxml.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lu.cxx /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/normaldistr.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffmsg.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/nsevd.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o [ 11%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianNrrd.c cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/methodsNrrd.c make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/sane.c Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". Scanning dependencies of target cmtkSystem make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enum.c [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/miscAir.c [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/qr.cxx [ 13%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/simple.c [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/reflections.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/rotations.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sblas.cxx [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sevd.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/spddet.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:123:58: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 123 | CommandLine::Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ) | ^~~~~ [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studenttdistr.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studentttests.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/svd.cxx [ 16%] Linking C shared library ../../bin/libNrrdIO.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz [ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tdevd.cxx [ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tridiagonal.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 16%] Built target NrrdIO [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/mersenne.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx:31: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStream.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamFile.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx:31: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamPipe.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamZlib.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkConsole.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkMemory.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkMountPoints.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgress.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgressConsole.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkRegressionTracker.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStackBacktrace.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStrUtility.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreads.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadPoolThreads.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadSemaphore.cxx /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx: In function 'std::string cmtk::FileUtils::GetAbsolutePath(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 147 | getcwd( absPath, PATH_MAX ); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkTimers.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamBZip2.cxx [ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkSystem [ 22%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,::::::::::::: make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkNumerics make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/depend.internal". Scanning dependencies of target cmtkBase make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveDeformationModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveShapeModel.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXform.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkBitVector.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid_Crop.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDirectionSet.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFilterVolume.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToLandmarks.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToXformList.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitToXformListBase.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkGeneralLinearModel.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHypothesisTests.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function 'virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)': /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:27: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:30: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:33: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:36: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:39: warning: format '%d' expects argument of type 'int', but argument 7 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRevert.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogram.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogramBase.cxx /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function 'static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)': /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format '%d' expects argument of type 'int*', but argument 3 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:47: warning: format '%d' expects argument of type 'int*', but argument 4 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:51: warning: format '%d' expects argument of type 'int*', but argument 5 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmark.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPair.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkList.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPairList.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathFunctionWrappers.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_LinAlg.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Random.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Statistics.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix3x3.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix4x4.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMetaInformationObject.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkParametricPlane.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkPolynomialXform.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImage.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImageGradientField.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSegmentationLabel.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Inverse.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Jacobian.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Rigidity.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXformUniformVolume.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeToSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformedVolumeAxes.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformDistanceMap.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Resample.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Space.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeGaussianFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumePainter.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeClipping.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeGridToGridLookup.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform_Inverse.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformList.cxx [ 42%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformListEntry.cxx [ 42%] Linking CXX shared library ../../bin/libcmtkBase.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkBase.so -o ../../bin/libcmtkBase.so CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o 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CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/depend.internal". Scanning dependencies of target cmtkIO make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkAffineXformITKIO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamStudyList.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileFormat.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkListIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor 'cmtk::ImageFileDICOM::ImageFileDICOM(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 155 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudy.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudyList.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStream.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamInput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function 'static void cmtk::VolumeFromFile::WriteMetaImage(const string&, const cmtk::UniformVolume&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function 'cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'long long int' [-Wformat=] 564 | fprintf( File, "%ld ", array[i] ); | ~~^ ~~~~~~~~ | | | | long int long long int | %lld [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromSlices.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeIO.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformListIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONifti.cxx /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function 'static const SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 58 | fgets( line, 96, fp ); | ~~~~~^~~~~~~~~~~~~~~~ [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONrrd.cxx [ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/nifti1_io_math.c [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSQLite.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx: In member function 'void cmtk::DICOM::InitFromFile(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 112 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 133 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 50%] Linking CXX shared library ../../bin/libcmtkIO.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -lz make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/depend.internal". Scanning dependencies of target cmtkRegistration make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkCongealingFunctional.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkHausdorffDistance.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkProtocolCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkReformatVolume.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetricElasticFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetryPlaneFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarity.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityMemory.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityRMI.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCorrRatio.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageXformDB.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 63%] Linking CXX shared library ../../bin/libcmtkRegistration.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRegistration.so -o ../../bin/libcmtkRegistration.so CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend.internal". Scanning dependencies of target cmtkRecon make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx Scanning dependencies of target cmtkSegmentation make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 67%] Linking CXX shared library ../../bin/libcmtkRecon.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkRecon [ 67%] Linking CXX shared library ../../bin/libcmtkSegmentation.so cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps 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Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend Scanning dependencies of target detect_adni_phantom make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= Scanning dependencies of target detect_spheres_matched_filter make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". Scanning dependencies of target dcm2image make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/depend.internal". Scanning dependencies of target mcwarp Scanning dependencies of target asegment_sri24 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/depend.internal". make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target xform2itk Scanning dependencies of target xform2scalar make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build [ 68%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target warp2ps make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx Scanning dependencies of target xform2dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build [ 68%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend [ 68%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx [ 68%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend [ 68%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o Scanning dependencies of target warp cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx [ 69%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 69%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". [ 69%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp.dir/warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warp.cxx Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". Scanning dependencies of target vtkxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". Scanning dependencies of target volume_reconstruction make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build Scanning dependencies of target unwarp_image_phantom Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 69%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx Scanning dependencies of target ttest Scanning dependencies of target unsplit make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build [ 70%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx [ 70%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx [ 71%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx [ 71%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx:38: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](0)' from 'double' to 'float' [-Wnarrowing] 190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; | ^ /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](1)' from 'double' to 'float' [-Wnarrowing] /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](2)' from 'double' to 'float' [-Wnarrowing] In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/warp.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 72%] Linking CXX executable ../bin/warp cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target warp make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". Scanning dependencies of target symplx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/symplx.dir/symplx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 72%] Linking CXX executable ../bin/unsplit cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Linking CXX executable ../bin/vtkxform cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Linking CXX executable ../bin/asegment_sri24 cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Linking CXX executable ../bin/xform2itk cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Linking CXX executable ../bin/detect_spheres_matched_filter cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Built target unsplit make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd 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Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/depend.internal". Scanning dependencies of target sympl make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../bin/symplx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target vtkxform make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend [ 72%] Built target asegment_sri24 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/depend.internal". Scanning dependencies of target streamxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target gmm make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx [ 72%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gmm.dir/gmm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/gmm.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target xform2itk make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target jidb make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target detect_spheres_matched_filter make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= [ 72%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/jidb.dir/jidb.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/jidb.cxx Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/depend.internal". Scanning dependencies of target geomatch make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Built target symplx make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/depend.internal". Scanning dependencies of target dbtool make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx [ 75%] Linking CXX executable ../bin/xform2scalar cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 75%] Linking CXX executable ../bin/warp2ps cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 75%] Linking CXX executable ../bin/detect_adni_phantom cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 In file included from /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/gmm.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 75%] Built target warp2ps make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target fit_spline_xform [ 75%] Built target xform2scalar make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= [ 75%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/depend.internal". cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx Scanning dependencies of target reorient make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 75%] Linking CXX executable ../bin/ttest [ 75%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 In file included from /build/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reorient.dir/reorient.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/reorient.cxx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/jidb.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target detect_adni_phantom make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/depend.internal". Scanning dependencies of target film make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 75%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/film.dir/film.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/film.cxx [ 75%] Linking CXX executable ../bin/xform2dfield cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 75%] Built target ttest make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/depend.internal". Scanning dependencies of target fib2image make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 75%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target xform2dfield make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend.internal". Scanning dependencies of target fit_affine_xform_landmarks make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx [ 77%] Linking CXX executable ../bin/unwarp_image_phantom cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/reorient.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/film.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target unwarp_image_phantom make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/depend.internal". Scanning dependencies of target fibxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/dcm2image cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 78%] Linking CXX executable ../bin/geomatch cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 [ 78%] Linking CXX executable ../bin/dbtool cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target dcm2image make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/depend.internal". Scanning dependencies of target epiunwarp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target geomatch make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target dbtool make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/depend.internal". Scanning dependencies of target hausdorff make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build Scanning dependencies of target mat2dof make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx [ 78%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/fib2image cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 78%] Linking CXX executable ../bin/fit_affine_xform_landmarks cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target fib2image make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend [ 78%] Linking CXX executable ../bin/reorient cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= [ 78%] Built target fit_affine_xform_landmarks make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/depend.internal". Scanning dependencies of target regress make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target dwi_mask_bad_slices make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/regress.dir/regress.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx [ 78%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx [ 79%] Linking CXX executable ../bin/streamxform cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target reorient make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/depend.internal". Scanning dependencies of target histogram make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/histogram.dir/histogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/histogram.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target streamxform make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". Scanning dependencies of target stream_pixels make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Linking CXX executable ../bin/fit_spline_xform cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 [ 79%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 79%] Linking CXX executable ../bin/volume_reconstruction cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 [ 80%] Linking CXX executable ../bin/gmm cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fit_spline_xform make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= [ 80%] Built target gmm make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/depend.internal". Scanning dependencies of target average_images Scanning dependencies of target fit_affine_dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx [ 80%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx [ 80%] Built target volume_reconstruction make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". Scanning dependencies of target asegment make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment.dir/asegment.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/histogram.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/hausdorff cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/fibxform cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target hausdorff make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/depend.internal". Scanning dependencies of target pxsearch make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target fibxform make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". Scanning dependencies of target fit_affine_xform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx [ 81%] Linking CXX executable ../bin/sympl cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target sympl make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/depend.internal". Scanning dependencies of target lvote make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 82%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lvote.dir/lvote.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lvote.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 82%] Linking CXX executable ../bin/fit_affine_dfield cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 [ 83%] Linking CXX executable ../bin/mat2dof cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target fit_affine_dfield make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= [ 83%] Built target mat2dof make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/depend.internal". Scanning dependencies of target mk_nifti_hdr make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build In file included from /build/cmtk-3.3.1p1+dfsg/apps/lvote.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/depend.internal". [ 83%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx Scanning dependencies of target vol2csv make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx [ 83%] Linking CXX executable ../bin/jidb cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target jidb make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". Scanning dependencies of target groupwise_warp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/asegment cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 83%] Linking CXX executable ../bin/epiunwarp cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 83%] Linking CXX executable ../bin/stream_pixels cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target asegment make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". Scanning dependencies of target split make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/split.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target stream_pixels [ 83%] Built target epiunwarp make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". Scanning dependencies of target avg_adm Scanning dependencies of target registrationx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx [ 83%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/histogram cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/split.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/regress cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target histogram make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/depend.internal". Scanning dependencies of target groupwise_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx [ 83%] Built target regress make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/depend.internal". Scanning dependencies of target mk_analyze_hdr make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx [ 83%] Linking CXX executable ../bin/film cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/dwi_mask_bad_slices cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Built target film make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/depend.internal". Scanning dependencies of target average_labels make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx:40: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= [ 84%] Linking CXX executable ../bin/average_images cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/depend.internal". /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target concat_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx [ 84%] Linking CXX executable ../bin/pxsearch cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Linking CXX executable ../bin/fit_affine_xform cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target average_images make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/depend.internal". [ 84%] Built target pxsearch make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= Scanning dependencies of target warpx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/depend.internal". [ 84%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warpx.dir/warpx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warpx.cxx Scanning dependencies of target volume_injection make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Linking CXX executable ../bin/registrationx [ 85%] Built target fit_affine_xform cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= [ 85%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". Scanning dependencies of target groupwise_init make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target registrationx make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/depend.internal". Scanning dependencies of target mk_adni_phantom make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 88%] Linking CXX executable ../bin/mk_nifti_hdr cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/warpx.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Built target mk_nifti_hdr make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/depend.internal". Scanning dependencies of target sbai make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sbai.dir/sbai.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sbai.cxx [ 88%] Linking CXX executable ../bin/lvote cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 88%] Linking CXX executable ../bin/warpx In file included from /usr/include/string.h:495, from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:49, from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: In function 'char* strncpy(char*, const char*, size_t)', inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:74:14, inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:71:8, inlined from 'int doMain(int, const char**)' at /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:28: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:72: note: length computed here 275 | header.StoreFieldString( 148, Description, std::min( strlen( Description )+1, 80 ) ); | ~~~~~~^~~~~~~~~~~~~~~ cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Built target lvote make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/depend.internal". Scanning dependencies of target describe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Built target warpx make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/depend.internal". Scanning dependencies of target average_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/sbai.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 89%] Linking CXX executable ../bin/mcwarp cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1 [ 89%] Linking CXX executable ../bin/vol2csv cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target vol2csv make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/depend.internal". Scanning dependencies of target glm make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/glm.dir/glm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/glm.cxx /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx: In function 'void DescribeImage(const char*)': /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:40: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:50: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:24: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:29: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:34: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target mcwarp make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/depend.internal". Scanning dependencies of target make_initial_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx [ 89%] Linking CXX executable ../bin/mk_analyze_hdr cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 89%] Linking CXX executable ../bin/split cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 90%] Linking CXX executable ../bin/concat_affine cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 91%] Linking CXX executable ../bin/average_labels cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target mk_analyze_hdr make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/depend.internal". [ 91%] Built target split In file included from /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= Scanning dependencies of target convert_warp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/depend.internal". [ 91%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o Scanning dependencies of target destripe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/destripe.dir/destripe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/destripe.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target concat_affine make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/depend.internal". Scanning dependencies of target imagemath make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target average_labels make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/depend.internal". Scanning dependencies of target similarity make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/similarity.dir/similarity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/similarity.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/destripe.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 91%] Linking CXX executable ../bin/mk_adni_phantom cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 In file included from /build/cmtk-3.3.1p1+dfsg/apps/similarity.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target mk_adni_phantom make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/depend.internal". Scanning dependencies of target gregxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx [ 91%] Linking CXX executable ../bin/avg_adm cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 91%] Linking CXX executable ../bin/groupwise_init cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target avg_adm make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/depend.internal". Scanning dependencies of target dof2mat make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx [ 91%] Linking CXX executable ../bin/average_affine cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target groupwise_init make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". Scanning dependencies of target levelset make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target average_affine make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/depend.internal". Scanning dependencies of target fit_spline_dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLine.h:41, from /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 91%] Linking CXX executable ../bin/make_initial_affine cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 In file included from /build/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 191 | fgets( line, 80, infile ); | ~~~~~^~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../bin/sbai cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 91%] Linking CXX executable ../bin/groupwise_warp cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target make_initial_affine make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". Scanning dependencies of target lsba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lsba.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target sbai make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/depend.internal". Scanning dependencies of target interleaved_bad_slices make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx [ 92%] Built target groupwise_warp make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/depend.internal". Scanning dependencies of target lmsba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx [ 93%] Linking CXX executable ../bin/describe cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 94%] Linking CXX executable ../bin/levelset cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/lsba.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 94%] Linking CXX executable ../bin/convert_warp cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 94%] Linking CXX executable ../bin/volume_injection cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 94%] Built target describe make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/depend.internal". Scanning dependencies of target statistics make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/statistics.dir/statistics.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/statistics.dir/statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/statistics.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target levelset make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= [ 95%] Built target convert_warp make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/depend.internal". Scanning dependencies of target mk_phantom_3d make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target mrbias make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx [ 95%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Built target volume_injection make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". Scanning dependencies of target convertx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convertx.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/statistics.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Linking CXX executable ../bin/groupwise_affine cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 95%] Linking CXX executable ../bin/glm cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 95%] Linking CXX executable ../bin/destripe cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 95%] Linking CXX executable ../bin/dof2mat cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Built target groupwise_affine make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= [ 95%] Linking CXX executable ../bin/similarity cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/depend.internal". /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target overlap make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/convertx.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Built target glm [ 96%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/overlap.dir/overlap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/overlap.cxx make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target destripe make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= Scanning dependencies of target filter Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target probe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/filter.dir/filter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx [ 96%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/probe.dir/probe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/probe.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target dof2mat make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/depend.internal". Scanning dependencies of target reformatx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 97%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target similarity make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/depend.internal". Scanning dependencies of target registration make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 97%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registration.dir/registration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/registration.cxx /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:192:7: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 192 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/memory:83, from /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:46: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/probe.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/overlap.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 97%] Linking CXX executable ../bin/gregxform cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target gregxform make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/depend.internal". Scanning dependencies of target sba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sba.dir/sba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sba.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/registration.cxx:40: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/sba.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 98%] Linking CXX executable ../bin/registration cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 98%] Linking CXX executable ../bin/fit_spline_dfield cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target registration make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/depend.internal". [ 98%] Linking CXX executable ../bin/lsba cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 Scanning dependencies of target mcaffine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 98%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target fit_spline_dfield make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/depend.internal". Scanning dependencies of target sequence make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sequence.dir/sequence.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sequence.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target lsba [ 98%] Linking CXX executable ../bin/lmsba cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 98%] Linking CXX executable ../bin/imagemath cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target lmsba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target imagemath [ 98%] Linking CXX executable ../bin/interleaved_bad_slices cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 [ 99%] Linking CXX executable ../bin/filter cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 99%] Linking CXX executable ../bin/statistics cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target filter [ 99%] Built target interleaved_bad_slices make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Linking CXX executable ../bin/overlap [ 99%] Built target statistics cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 99%] Linking CXX executable ../bin/mk_phantom_3d cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target overlap make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target mk_phantom_3d [ 99%] Linking CXX executable ../bin/sba cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 99%] Linking CXX executable ../bin/convertx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 99%] Built target sba [100%] Linking CXX executable ../bin/sequence cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target convertx [100%] Built target sequence [100%] Linking CXX executable ../bin/mrbias cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Linking CXX executable ../bin/probe cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target mrbias make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target probe [100%] Linking CXX executable ../bin/reformatx cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target reformatx [100%] Linking CXX executable ../bin/mcaffine cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target mcaffine make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' ARGS=--verbose xvfb-run --auto-servernum --server-num=20 \ dh_auto_test cd obj-x86_64-linux-gnu && make -j15 test ARGS\+=-j15 make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --auto-servernum --server-num '20' -- 'dh_auto_test' -j15 Test project /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu No tests were found!!! make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_testroot dh_prep rm -f -- debian/cmtk.substvars rm -fr -- debian/.debhelper/generated/cmtk/ debian/cmtk/ debian/tmp/ dh_installdirs install -d debian/cmtk/etc/cmtk rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_install cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/cmtk-3.3.1p1\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/cmtk-3.3.1p1+dfsg -B/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 8%] Built target NrrdIO make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'Utilities/mxml/CMakeFiles/cmtkMxml.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 10%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Numerics/CMakeFiles/cmtkNumerics.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 16%] Built target cmtkNumerics make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/System/CMakeFiles/cmtkSystem.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Base/CMakeFiles/cmtkBase.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/IO/CMakeFiles/cmtkIO.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Registration/CMakeFiles/cmtkRegistration.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Recon/CMakeFiles/cmtkRecon.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build [ 63%] Built target cmtkRecon make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dcm2image.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/detect_spheres_matched_filter.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/unsplit.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2itk.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/detect_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/ttest.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warp2ps.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 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apps/CMakeFiles/geomatch.dir/depend [ 69%] Built target warp2ps make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2scalar.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 69%] Built target asegment_sri24 make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= [ 69%] Built target vtkxform make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/unwarp_image_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= [ 70%] Built target xform2scalar make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend [ 71%] Built target xform2dfield make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= [ 72%] Built target unwarp_image_phantom make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= [ 73%] Built target warp make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/volume_reconstruction.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build [ 74%] Built target volume_reconstruction make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcwarp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build [ 74%] Built target mcwarp make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dbtool.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build [ 75%] Built target dbtool make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform_landmarks.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gmm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/geomatch.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 76%] Built target fit_affine_xform_landmarks make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend [ 77%] Built target gmm make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend [ 78%] Built target geomatch make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reorient.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/symplx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/streamxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build [ 78%] Built target reorient make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend [ 78%] Built target symplx make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend [ 79%] Built target streamxform make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fib2image.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_xform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target fib2image make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend [ 79%] Built target fit_spline_xform make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fibxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fibxform make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/jidb.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= [ 80%] Built target jidb make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/epiunwarp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/film.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target epiunwarp make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend [ 80%] Built target film make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sympl.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= [ 80%] Built target sympl make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/hausdorff.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build [ 81%] Built target hausdorff make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mat2dof.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build [ 82%] Built target mat2dof make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/histogram.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dwi_mask_bad_slices.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/regress.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Built target histogram make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/stream_pixels.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target regress make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_images.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target stream_pixels make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend [ 83%] Built target fit_affine_dfield make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= [ 83%] Built target average_images make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/pxsearch.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= [ 83%] Built target pxsearch make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/asegment.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_nifti_hdr.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target asegment make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend [ 84%] Built target mk_nifti_hdr make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lvote.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build [ 85%] Built target lvote make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/vol2csv.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target fit_affine_xform make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= [ 85%] Built target vol2csv make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/split.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build [ 85%] Built target split make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_analyze_hdr.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_warp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target mk_analyze_hdr make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend [ 85%] Built target groupwise_warp make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/avg_adm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target avg_adm make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_labels.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build [ 86%] Built target average_labels make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/concat_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registrationx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target concat_affine make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Built target registrationx make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= [ 89%] Built target mk_adni_phantom make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warpx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build [ 89%] Built target warpx make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/volume_injection.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= [ 89%] Built target volume_injection make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/describe.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_init.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sbai.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target describe make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target groupwise_init make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= [ 91%] Built target sbai make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend [ 92%] Built target average_affine make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= [ 92%] Built target groupwise_affine make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/glm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build [ 92%] Built target glm make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/make_initial_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/convert_warp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build [ 92%] Built target make_initial_affine make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend [ 92%] Built target convert_warp make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/destripe.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target destripe make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dof2mat.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target dof2mat make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/imagemath.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target imagemath make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gregxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= [ 92%] Built target gregxform make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/similarity.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target similarity make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/levelset.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target levelset make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lsba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= [ 93%] Built target fit_spline_dfield make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend [ 93%] Built target lsba make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lmsba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/interleaved_bad_slices.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_phantom_3d.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target lmsba make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build [ 94%] Built target interleaved_bad_slices make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build [ 94%] Built target mk_phantom_3d make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/statistics.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build [ 95%] Built target statistics make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/overlap.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mrbias.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target overlap [ 96%] Built target mrbias make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sequence.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/filter.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/convertx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/probe.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target sequence [ 98%] Built target filter [ 98%] Built target convertx [ 98%] Built target probe make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registration.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reformatx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcaffine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target sba [ 99%] Built target registration [100%] Built target mcaffine [100%] Built target reformatx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKLibraryDepends.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libNrrdIO.so -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/NrrdIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_NrrdIO_mangle.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateAir.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateBiff.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateNrrd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teem32bit.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemDio.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemEndian.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemPng.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemQnanhibit.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkMxml.so -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_mxml_mangle.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml-private.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/config.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCannotBeCopied.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineTypeTraits.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCompressedStream.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkConsole.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCoverity.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkDebugOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkException.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkExitException.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFFTW.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFileUtils.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkLockingPtr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMemory.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMountPoints.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMutexLock.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgress.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgressConsole.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkRegressionTracker.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterGCD.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterMutex.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartConstPtr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartPtr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStackBacktrace.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStrUtility.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTestFunctionMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameters.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPool.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphore.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSystemTypes.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreads.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTimers.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineConvert.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineItem.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineList.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineOption.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineVector.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreAppleIsRetarded.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreNone.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphorePOSIX.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreWindows.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/apvt.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bdsvd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bidiagonal.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/blas.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/cholesky.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/det.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/gammaf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hessenberg.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hsschur.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ibetaf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/igammaf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lbfgsb.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lq.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lu.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/normaldistr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/nsevd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/qr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/randomc.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/reflections.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/rotations.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sblas.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sevd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/spddet.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studenttdistr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studentttests.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/svd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tdevd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tridiagonal.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveDeformationModel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveShapeModel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXformUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientationBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkBitVector.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCompatibilityMatrix4x4.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicSpline.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridLocalCorrelation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridMorphologicalOperators.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataTypeTraits.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDeformationField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDetectedPhantomMagphanEMR051.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDirectionSet.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDistanceMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterMask.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToWarpXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToXformList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitPolynomialToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitRigidToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToDeformationField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToXformList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitToXformListBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedVector.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGaussianKernel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGeneralLinearModel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHashMapSTL.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHypothesisTests.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationBoundaryMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConnectedComponents.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConvertType.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropRegion.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDistanceMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDownsample.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilateDistance.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationFlip.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationGaussFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationHistogramEqualization.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationLaplaceFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationMapValues.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationOtsuThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationPruneHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRegionFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationReplace.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationResampleIsotropic.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRevert.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationScaleToRange.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetDataClass.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetPadding.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogramBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmark.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPair.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPairList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLeastSquares.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLinearInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLogHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMacros.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMagphanEMR051.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathFunctionWrappers.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix3x3.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix4x4.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMetaInformationObject.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkNearestNeighborInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkParametricPlane.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomial.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomialXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkProbeInfo.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionIndexIterator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionSphereIterator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImage.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImageGradientField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSegmentationLabel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSincInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXformUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSurfaceNormal.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSymmetricMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeFromSpaceAffine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeToSpaceAffine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformedVolumeAxes.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramEqualization.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramMatching.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypes.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformDistanceMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeGaussianFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeHoughTransformSphere.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorPartialVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeLaplaceFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeMorphologicalOperators.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumePainter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnionFind.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnits.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector3D.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeClipping.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeGridToGridLookup.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkWarpXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformListEntry.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil_Statistics.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray_Statistics.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAffineXformITKIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAnalyze.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamAffineXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamInput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamPolynomialXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamStudyList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkDICOM.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileConstHeader.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileFormat.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileHeader.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkGroupwiseRegistrationFunctionalIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageFileDICOM.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationApplyMask.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationMatchIntensities.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageStackDICOM.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkListIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkPhantomIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSQLite.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSegmentationLabelIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSiemensCSAHeader.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSplineWarpXformITKIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudy.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyImageSet.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStream.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamInput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamStudylist.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromFile.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromSlices.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromStudy.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformListIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1_io_math.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineCongealingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestDirectionOptimizer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestNeighbourOptimizer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkCongealingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkEchoPlanarUnwarpFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkHausdorffDistance.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityJointHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasure.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureCR.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMI.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMSD.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNCC.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNMI.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureRMS.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLineBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageXformDB.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMakeInitialAffineTransformation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizerBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkProtocolCallback.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationCallback.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationJointHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkScaleHistogramValueTrait.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSearchTrace.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetricElasticFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetryPlaneFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTemplateMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarity.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarityMemory.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCorrRatio.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCrossCorrelation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingElasticFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMeanSquaredDifference.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric_Type.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMutInf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingNormMutInf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeJacobian.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumePlain.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeReformat.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctionalThreadFunctions.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkAtlasSegmentation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkDetectPhantomMagphanEMR051.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalVoting.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalWeighting.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationSTAPLE.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveraging.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationVoting.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkMultiChannelEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkOverlapMeasures.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelset.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLineBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionBox.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionGaussian.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkVolumeInjectionReconstruction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking.sh -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking_procmail.sh -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/bin/cmtk make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' : # Remove not needed headers, cmake files etc rm -fr /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include /usr/bin/find /build/cmtk-3.3.1p1+dfsg/debian/cmtk -iname *.cmake -delete /usr/bin/find: paths must precede expression: `cmtkConfigureCPack.cmake' /usr/bin/find: possible unquoted pattern after predicate `-iname'? make[1]: [debian/rules:72: override_dh_auto_install] Error 1 (ignored) : # Prune duplicate docs rm -fr /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc : # Generate manpages xvfb-run --auto-servernum --server-num=20 \ scripts/gen_manpages \ || dpkg -l xvfb | awk '/xvfb/{print ;}' | grep -q ubuntu ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: line 37: /usr/lib/cmtk/bin/cmtk_locking.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: line 36: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: line 36: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. : # Above condition just to ignore unclean exit from xvfb on elderly broken ubuntus : # Cleaner solution patches are welcome! make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_install cp --reflink=auto -a ./debian/cmtk.sh debian/cmtk/etc/cmtk/ install -d debian/.debhelper/generated/cmtk dh_installdocs install -d debian/cmtk/usr/share/doc/cmtk cp --reflink=auto -a ./README.txt debian/cmtk/usr/share/doc/cmtk cd './debian/upstream/..' && find 'upstream' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/doc/cmtk chown -R 0:0 debian/cmtk/usr/share/doc chmod -R u\+rw,go=rX debian/cmtk/usr/share/doc install -p -m0644 debian/README.Debian debian/cmtk/usr/share/doc/cmtk/README.Debian install -p -m0644 debian/TODO debian/cmtk/usr/share/doc/cmtk/TODO.Debian install -p -m0644 debian/copyright debian/cmtk/usr/share/doc/cmtk/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/cmtk/usr/share/doc/cmtk/changelog.Debian install -p -m0644 ./CHANGELOG debian/cmtk/usr/share/doc/cmtk/changelog rm -f debian/cmtk.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_installman debian/manpages/* install -d debian/cmtk/usr/share/man/man1/ install -p -m0644 debian/manpages/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment.1 install -p -m0644 debian/manpages/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 install -p -m0644 debian/manpages/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 install -p -m0644 debian/manpages/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 install -p -m0644 debian/manpages/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 install -p -m0644 debian/manpages/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 install -p -m0644 debian/manpages/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 install -p -m0644 debian/manpages/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 install -p -m0644 debian/manpages/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 install -p -m0644 debian/manpages/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 install -p -m0644 debian/manpages/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 install -p -m0644 debian/manpages/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 install -p -m0644 debian/manpages/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 install -p -m0644 debian/manpages/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 install -p -m0644 debian/manpages/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 install -p -m0644 debian/manpages/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 install -p -m0644 debian/manpages/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 install -p -m0644 debian/manpages/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 install -p -m0644 debian/manpages/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 install -p -m0644 debian/manpages/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 install -p -m0644 debian/manpages/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 install -p -m0644 debian/manpages/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 install -p -m0644 debian/manpages/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 install -p -m0644 debian/manpages/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 install -p -m0644 debian/manpages/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 install -p -m0644 debian/manpages/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 install -p -m0644 debian/manpages/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 install -p -m0644 debian/manpages/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 install -p -m0644 debian/manpages/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 install -p -m0644 debian/manpages/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 install -p -m0644 debian/manpages/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 install -p -m0644 debian/manpages/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 install -p -m0644 debian/manpages/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 install -p -m0644 debian/manpages/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 install -p -m0644 debian/manpages/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 install -p -m0644 debian/manpages/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 install -p -m0644 debian/manpages/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 install -p -m0644 debian/manpages/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 install 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debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new 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debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_perl dh_link dh_strip_nondeterminism dh_compress cd debian/cmtk chmod a-x usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 gzip -9nf usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 cd '/build/cmtk-3.3.1p1+dfsg' dh_fixperms find debian/cmtk -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/cmtk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/cmtk/usr/share/doc -type f -a -true -a ! -regex 'debian/cmtk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/cmtk/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/cmtk/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz install -d debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -- debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so dwz: debian/cmtk/usr/lib/cmtk/libNrrdIO.so: DWARF compression not beneficial - old size 191885 new size 194881 objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug dh_strip install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/ce4676b7c8efc2a4a04e36eca28a778c7fc67e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/ce4676b7c8efc2a4a04e36eca28a778c7fc67e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/ce4676b7c8efc2a4a04e36eca28a778c7fc67e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/ce4676b7c8efc2a4a04e36eca28a778c7fc67e.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/f3b7058fe2dc18b87f7779a84b111d6c3fd81f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/f3b7058fe2dc18b87f7779a84b111d6c3fd81f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/f3b7058fe2dc18b87f7779a84b111d6c3fd81f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/f3b7058fe2dc18b87f7779a84b111d6c3fd81f.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/fe0adfc03a8f24f8782cd63712d8394e484c6f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/fe0adfc03a8f24f8782cd63712d8394e484c6f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/fe0adfc03a8f24f8782cd63712d8394e484c6f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/fe0adfc03a8f24f8782cd63712d8394e484c6f.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/6ee05be25f69ec89e41ad3b307f29529d4a98d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/6ee05be25f69ec89e41ad3b307f29529d4a98d.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/6ee05be25f69ec89e41ad3b307f29529d4a98d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/6ee05be25f69ec89e41ad3b307f29529d4a98d.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/4b827ad316e9b6ee630f217038d8b4d010b99a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/4b827ad316e9b6ee630f217038d8b4d010b99a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/4b827ad316e9b6ee630f217038d8b4d010b99a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4a/4b827ad316e9b6ee630f217038d8b4d010b99a.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1f/566edc82ada24b06d77461689c0c61d267e3dc.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1f/566edc82ada24b06d77461689c0c61d267e3dc.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1f/566edc82ada24b06d77461689c0c61d267e3dc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1f/566edc82ada24b06d77461689c0c61d267e3dc.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/6770359044b3ff3f70f0a929e24135785ac7d9.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/6770359044b3ff3f70f0a929e24135785ac7d9.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/6770359044b3ff3f70f0a929e24135785ac7d9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/6770359044b3ff3f70f0a929e24135785ac7d9.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/1966e7460218cae802a7e36717902884b703e7.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/1966e7460218cae802a7e36717902884b703e7.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/1966e7460218cae802a7e36717902884b703e7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/1966e7460218cae802a7e36717902884b703e7.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/20c1e690f429d0f909095094cdc7ced5137c53.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/20c1e690f429d0f909095094cdc7ced5137c53.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/20c1e690f429d0f909095094cdc7ced5137c53.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d9/20c1e690f429d0f909095094cdc7ced5137c53.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/8ac3dcb31b368c5af579243a7a60bc83a2521f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/8ac3dcb31b368c5af579243a7a60bc83a2521f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/8ac3dcb31b368c5af579243a7a60bc83a2521f.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/8ac3dcb31b368c5af579243a7a60bc83a2521f.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/7b839b09836ba67372c3e41abda51fb456fd16.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/7b839b09836ba67372c3e41abda51fb456fd16.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/7b839b09836ba67372c3e41abda51fb456fd16.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2itk objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/7b839b09836ba67372c3e41abda51fb456fd16.debug debian/cmtk/usr/lib/cmtk/bin/xform2itk install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/21/a8c38938d136fc8c33976912c2cb0ca3050f66.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/21/a8c38938d136fc8c33976912c2cb0ca3050f66.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/21/a8c38938d136fc8c33976912c2cb0ca3050f66.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2dfield objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/21/a8c38938d136fc8c33976912c2cb0ca3050f66.debug debian/cmtk/usr/lib/cmtk/bin/xform2dfield install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/d9a8ee092811fd9dd7a46da22a64f2079f6f44.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/d9a8ee092811fd9dd7a46da22a64f2079f6f44.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/d9a8ee092811fd9dd7a46da22a64f2079f6f44.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/d9a8ee092811fd9dd7a46da22a64f2079f6f44.debug debian/cmtk/usr/lib/cmtk/bin/warpx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/37 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/37/179d9865ab197370bd157ab17335565a15fde0.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/37/179d9865ab197370bd157ab17335565a15fde0.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/37/179d9865ab197370bd157ab17335565a15fde0.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/37/179d9865ab197370bd157ab17335565a15fde0.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/dc7653d6242c2000dda029d8a37a296e8974f6.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/dc7653d6242c2000dda029d8a37a296e8974f6.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/dc7653d6242c2000dda029d8a37a296e8974f6.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/23/dc7653d6242c2000dda029d8a37a296e8974f6.debug debian/cmtk/usr/lib/cmtk/bin/warp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vtkxform 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install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registration debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/e5cd5dfe8e8d6d42e0aab5fa1b2657b3e32207.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/e5cd5dfe8e8d6d42e0aab5fa1b2657b3e32207.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/e5cd5dfe8e8d6d42e0aab5fa1b2657b3e32207.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registration objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/e5cd5dfe8e8d6d42e0aab5fa1b2657b3e32207.debug debian/cmtk/usr/lib/cmtk/bin/registration objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/65d9a716153f975474b19d17fa1eb555316ab9.debug chmod 0644 -- 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debian/cmtk/usr/lib/cmtk/bin/pxsearch objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/14077bb9f51a87bc5316bb088f3509d7449af6.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/probe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1435fa0781680c95f641eea905a051249931df.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1435fa0781680c95f641eea905a051249931df.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1435fa0781680c95f641eea905a051249931df.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/probe objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1435fa0781680c95f641eea905a051249931df.debug debian/cmtk/usr/lib/cmtk/bin/probe install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3a49c5e2919caf48617c7034df00cc5480457d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3a49c5e2919caf48617c7034df00cc5480457d.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3a49c5e2919caf48617c7034df00cc5480457d.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/3a49c5e2919caf48617c7034df00cc5480457d.debug debian/cmtk/usr/lib/cmtk/bin/overlap install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mrbias 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debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/af/7ac4f97fc57d9509226acffc7c420df450eb3e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/af/7ac4f97fc57d9509226acffc7c420df450eb3e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/af/7ac4f97fc57d9509226acffc7c420df450eb3e.debug debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/352aa225c9fd59c5af5c3b090c34bc21b3ffa5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/352aa225c9fd59c5af5c3b090c34bc21b3ffa5.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/352aa225c9fd59c5af5c3b090c34bc21b3ffa5.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/352aa225c9fd59c5af5c3b090c34bc21b3ffa5.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/ee8ca2adff2d99f1d721df5fcf02a682d6e4dd.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/ee8ca2adff2d99f1d721df5fcf02a682d6e4dd.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/ee8ca2adff2d99f1d721df5fcf02a682d6e4dd.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/ee8ca2adff2d99f1d721df5fcf02a682d6e4dd.debug debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/15c9f6dc1be9297e98ef17794dfb62ba45a316.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/15c9f6dc1be9297e98ef17794dfb62ba45a316.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/15c9f6dc1be9297e98ef17794dfb62ba45a316.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/15c9f6dc1be9297e98ef17794dfb62ba45a316.debug debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9b objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9b/7cd91a5daf9c91d0288d012f15a196a1116406.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9b/7cd91a5daf9c91d0288d012f15a196a1116406.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9b/7cd91a5daf9c91d0288d012f15a196a1116406.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcwarp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9b/7cd91a5daf9c91d0288d012f15a196a1116406.debug debian/cmtk/usr/lib/cmtk/bin/mcwarp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/9aac20029d6dfa81952b909ea58cb4fd1df41d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/9aac20029d6dfa81952b909ea58cb4fd1df41d.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/9aac20029d6dfa81952b909ea58cb4fd1df41d.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0/9aac20029d6dfa81952b909ea58cb4fd1df41d.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d5/2b201e949c347566658cd9267ea505c9f29777.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d5/2b201e949c347566658cd9267ea505c9f29777.debug chown 0:0 -- 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debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/504df2f2346fa6e8e5642f7365488b3ef9ca56.debug debian/cmtk/usr/lib/cmtk/bin/make_initial_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/bb917f4205a6348e966f9fe1688a5f4e8cc3a4.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/bb917f4205a6348e966f9fe1688a5f4e8cc3a4.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/bb917f4205a6348e966f9fe1688a5f4e8cc3a4.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/32/bb917f4205a6348e966f9fe1688a5f4e8cc3a4.debug debian/cmtk/usr/lib/cmtk/bin/lvote install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/69eddb43cfda4c52b95b1144ee712db3f6e81c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/69eddb43cfda4c52b95b1144ee712db3f6e81c.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/69eddb43cfda4c52b95b1144ee712db3f6e81c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/69eddb43cfda4c52b95b1144ee712db3f6e81c.debug debian/cmtk/usr/lib/cmtk/bin/lsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/3e41a3be0b90ee17b7922336d69d29a8a90127.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/3e41a3be0b90ee17b7922336d69d29a8a90127.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/3e41a3be0b90ee17b7922336d69d29a8a90127.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/3e41a3be0b90ee17b7922336d69d29a8a90127.debug debian/cmtk/usr/lib/cmtk/bin/lmsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/levelset debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/e00d42c04d1355fe69a70a5e9c932702987992.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/e00d42c04d1355fe69a70a5e9c932702987992.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/e00d42c04d1355fe69a70a5e9c932702987992.debug 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debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/15783cc05a11c0c99b7be393e2ab6e69056ad3.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/15783cc05a11c0c99b7be393e2ab6e69056ad3.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/15783cc05a11c0c99b7be393e2ab6e69056ad3.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/15783cc05a11c0c99b7be393e2ab6e69056ad3.debug debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath 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debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/41d0f6446417b03435efe37a71f077567eba8a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/41d0f6446417b03435efe37a71f077567eba8a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/41d0f6446417b03435efe37a71f077567eba8a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/41d0f6446417b03435efe37a71f077567eba8a.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm 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objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/7c0652e71a958dc82d33c705ccdbef4d79308e.debug debian/cmtk/usr/lib/cmtk/bin/average_images install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f/fafba757c670cde84e74d25d5d3e2cfdc74199.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f/fafba757c670cde84e74d25d5d3e2cfdc74199.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f/fafba757c670cde84e74d25d5d3e2cfdc74199.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f/fafba757c670cde84e74d25d5d3e2cfdc74199.debug debian/cmtk/usr/lib/cmtk/bin/average_affine objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/e9b7122440da8ed28bcf9fedf19b4723be73b9.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/e9b7122440da8ed28bcf9fedf19b4723be73b9.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/e9b7122440da8ed28bcf9fedf19b4723be73b9.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/64/e9b7122440da8ed28bcf9fedf19b4723be73b9.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/95c67198c89a217c86a58840ef8df72fe516bb.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/95c67198c89a217c86a58840ef8df72fe516bb.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/95c67198c89a217c86a58840ef8df72fe516bb.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/95c67198c89a217c86a58840ef8df72fe516bb.debug debian/cmtk/usr/lib/cmtk/bin/asegment install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/cmtk/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/cmtk/usr/lib/debug install -d debian/.debhelper/cmtk/dbgsym-root/usr/share/doc ln -s cmtk debian/.debhelper/cmtk/dbgsym-root/usr/share/doc/cmtk-dbgsym dh_makeshlibs rm -f debian/cmtk/DEBIAN/shlibs dh_shlibdeps install -d debian/cmtk/DEBIAN dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_setspecific: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) dh_installdeb find debian/cmtk/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/cmtk/DEBIAN/conffiles chmod 0644 -- debian/cmtk/DEBIAN/conffiles chown 0:0 -- debian/cmtk/DEBIAN/conffiles dh_gencontrol echo misc:Depends= >> debian/cmtk.substvars echo misc:Pre-Depends= >> debian/cmtk.substvars install -d debian/.debhelper/cmtk/dbgsym-root/DEBIAN dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/.debhelper/cmtk/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=cmtk-dbgsym "-DDepends=cmtk (= \${binary:Version})" "-DDescription=debug symbols for cmtk" "-DBuild-Ids=02d924e810676d7ebb46043e573aa9ff4ac1d849 08456bf657a1dd0990323eef9eb09020f7182555 106ee05be25f69ec89e41ad3b307f29529d4a98d 14d93985143d0c77976190f150411df1807187a2 19533ab43cc179f147eea199d622cf2c02b87b61 1a32ecb5ece5313db854cab27660de6c1225b647 1ece4676b7c8efc2a4a04e36eca28a778c7fc67e 1f566edc82ada24b06d77461689c0c61d267e3dc 21a8c38938d136fc8c33976912c2cb0ca3050f66 23dc7653d6242c2000dda029d8a37a296e8974f6 2c538c08824ccadfadbff6a3e2790c001c67d7aa 30036e37b5676f397296e22350ab43e7bdaabdd8 320a106e2c0d8887363cf4b9d007d95b92865722 32bb917f4205a6348e966f9fe1688a5f4e8cc3a4 333e41a3be0b90ee17b7922336d69d29a8a90127 34b1c417ddad0b4e60f78d57bd79521c9dcbc481 37179d9865ab197370bd157ab17335565a15fde0 3f03d11ee8be20173679a9c863b9c1b71101f221 3fae1b2cf5fc361fefcf5f7e4ced053ea735cc79 44352aa225c9fd59c5af5c3b090c34bc21b3ffa5 4766831568bbf923923d119114be412cdf064a81 47e7fe4da0fc8c647903614c508bea6beb21a3ed 47ee8ca2adff2d99f1d721df5fcf02a682d6e4dd 48252fd408248919d14def8250e8fdd76b44d772 4a0bf27dcfb3151794c4709ded40596001020eba 4a4b827ad316e9b6ee630f217038d8b4d010b99a 4ced581710da549b7c7f35304c9565a2d8f4147a 52f3b7058fe2dc18b87f7779a84b111d6c3fd81f 542d41aa0800d7a50962b9501a13d23f16083074 5562679848159b03f079cc29a18cc86a06d83a38 5566a13da18b38f63055742c890859641af29fd2 56e08a500dc2630e4ff6c660c87af12609d2471b 5ffafba757c670cde84e74d25d5d3e2cfdc74199 6014077bb9f51a87bc5316bb088f3509d7449af6 6053ab2a95e7d99086a121478dcf027c763d56c5 6065d9a716153f975474b19d17fa1eb555316ab9 62ee62a89828c88892f985ee76bc44a11d05b055 63bca33586d1cfaec5a48192916c33ac159db554 63f4dd814f05b71f174acf680c5c76c5167dc53b 641966e7460218cae802a7e36717902884b703e7 64e9b7122440da8ed28bcf9fedf19b4723be73b9 661435fa0781680c95f641eea905a051249931df 67e4e8f8fb3c3b83e5e7068526c6caf528371715 6b3ec2a0462c5c11313ce87b49981593d921d43d 6e6f829c9191f007230fa01f1b0ab68e6cd98dfd 72fe0adfc03a8f24f8782cd63712d8394e484c6f 74a515e3e7944be3306505b6744a6b6cc92252bc 845a2733cd10b1d2eecb0ba3146402dc2769f9f8 8569eddb43cfda4c52b95b1144ee712db3f6e81c 8811704598f07f14ba457c82386eff37fcc8e9ea 8c6ab85fac81ca3dff102f8437c6fdde1bcdc894 8d566cf3cea8967ef4997cc26dc8f4f77081cd36 90ce413731abf25d4ff2261452339547e660a009 914c7e8bb7646fec2c67e4117d5732f1f90e8815 91e00d42c04d1355fe69a70a5e9c932702987992 96531bba64af5298285f7b35eb11dd0c9418874a 98dcab7afea56a0aaed00d45278d5f7551b124a8 99193a36be6f1432ab95b6d13f471c8c7d2c9dbd 994ba42c6dfc42cf83518be74cbe34ed988e4e5c 9b7cd91a5daf9c91d0288d012f15a196a1116406 9de5cd5dfe8e8d6d42e0aab5fa1b2657b3e32207 9f06215d7c65d2ea8b37b1c74205782d121b3eeb a041d0f6446417b03435efe37a71f077567eba8a a53a49c5e2919caf48617c7034df00cc5480457d a92543f84e4028bea5b8e6c4fea7a9f79d339bde a9384b356d0c3ec6f721326b77cdc458edb6a78a aa9083062cb86cb7dcda9d1fb3663575ec70e0f4 ac95c67198c89a217c86a58840ef8df72fe516bb af7ac4f97fc57d9509226acffc7c420df450eb3e b0294093d20f74f77066a1a7762212e4ab503f60 bc49fe40718569ece5547e66c666cc13ac87a9dd bd26fc5560ec2da8d40d45475d246ad1df86aa99 bda929ac0702c50bfcefaebbfd5494444e6cd8a2 c1d9a8ee092811fd9dd7a46da22a64f2079f6f44 c78c772595299d6e26f68f06eae06a75ee7b8e6f cc935b0b8fbb791e29cdae3eb80458d00c663229 cdbde08fcb1f0098792636b712cd53c17aa4622f d1504df2f2346fa6e8e5642f7365488b3ef9ca56 d16770359044b3ff3f70f0a929e24135785ac7d9 d1adb5840d8936e4a0d7a582bd340236e42e4f3e d52b201e949c347566658cd9267ea505c9f29777 d7b99a2f024c8ea4aa82508380a19d6aa2144b0e d920c1e690f429d0f909095094cdc7ced5137c53 da15c9f6dc1be9297e98ef17794dfb62ba45a316 da7b839b09836ba67372c3e41abda51fb456fd16 e09aac20029d6dfa81952b909ea58cb4fd1df41d e1b8750ff983e5a6b7e34187da781f159e821898 e22b01e9a150f24bd5827b1f76c1e5556185e028 e38ac3dcb31b368c5af579243a7a60bc83a2521f ea2e3928255035a28ccf8b0e9b0569a5dd8ebf45 ee15783cc05a11c0c99b7be393e2ab6e69056ad3 f97c0652e71a958dc82d33c705ccdbef4d79308e" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/cmtk chmod 0644 -- debian/cmtk/DEBIAN/control chown 0:0 -- debian/cmtk/DEBIAN/control dh_md5sums cd debian/cmtk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/cmtk/DEBIAN/md5sums chown 0:0 -- debian/cmtk/DEBIAN/md5sums cd debian/.debhelper/cmtk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/cmtk .. dpkg-deb --build debian/.debhelper/cmtk/dbgsym-root .. dpkg-deb: building package 'cmtk-dbgsym' in '../cmtk-dbgsym_3.3.1p1+dfsg-2_amd64.deb'. dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p1+dfsg-2_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../cmtk_3.3.1p1+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3894293/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3894293/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3894293 and its subdirectories I: Current time: Sun Dec 26 10:16:45 +14 2021 I: pbuilder-time-stamp: 1640463405