Diff of the two buildlogs: -- --- b1/build.log 2024-05-30 21:25:21.302172731 +0000 +++ b2/build.log 2024-05-30 21:27:25.884868543 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu May 30 09:17:37 -12 2024 -I: pbuilder-time-stamp: 1717103857 +I: Current time: Thu Jul 3 17:48:23 +14 2025 +I: pbuilder-time-stamp: 1751514503 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,52 +25,84 @@ dpkg-source: info: unpacking presto_0.7.2-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/463352/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jul 3 03:48 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='7c6b980341b247e3b5f8587749bf08e7' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='463352' - PS1='# ' - PS2='> ' + INVOCATION_ID=a403bcc5fe124f21a4d7e2766377f9ab + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3423831 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ygf2C9O2/pbuilderrc_b3cJ --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ygf2C9O2/b1 --logfile b1/build.log presto_0.7.2-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ygf2C9O2/pbuilderrc_gDVr --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ygf2C9O2/b2 --logfile b2/build.log presto_0.7.2-1.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 27 07:42 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/463352/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Jun 29 14:05 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -242,7 +274,7 @@ Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-pandas all 2.1.4+dfsg-8 [3015 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.11.4-10 [19.5 MB] Get: 118 http://deb.debian.org/debian unstable/main amd64 vsearch amd64 2.28.1-1 [403 kB] -Fetched 99.0 MB in 5s (21.0 MB/s) +Fetched 99.0 MB in 5s (21.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19716 files and directories currently installed.) @@ -639,8 +671,8 @@ Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu May 30 21:20:18 UTC 2024. -Universal Time is now: Thu May 30 21:20:18 UTC 2024. +Local time is now: Thu Jul 3 03:49:07 UTC 2025. +Universal Time is now: Thu Jul 3 03:49:07 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1) ... @@ -748,7 +780,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/presto-0.7.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../presto_0.7.2-1_source.changes +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/presto-0.7.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../presto_0.7.2-1_source.changes dpkg-buildpackage: info: source package presto dpkg-buildpackage: info: source version 0.7.2-1 dpkg-buildpackage: info: source distribution unstable @@ -786,14 +822,14 @@ running build_py creating /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/Applications.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/IO.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/__init__.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/Applications.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto running build_scripts creating build creating build/scripts-3.12 @@ -830,14 +866,14 @@ running build_py creating /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/Applications.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/IO.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/__init__.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/Applications.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto running build_scripts creating build/scripts-3.11 copying and adjusting bin/AlignSets.py -> build/scripts-3.11 @@ -984,7 +1020,7 @@ {1: ['SEQ1', 'SEQ2', 'SEQ3'], 2: ['SEQ4', 'SEQ5']} ZERO_LENGTH> None -<- test_runCDHit() 0.039 +<- test_runCDHit() 0.020 -> test_runUClust() FULL_LENGTH> {1: ['SEQ1', 'SEQ2', 'SEQ3'], 2: ['SEQ4', 'SEQ5']} @@ -992,7 +1028,7 @@ {1: ['SEQ1', 'SEQ2', 'SEQ3'], 2: ['SEQ4', 'SEQ5']} ZERO_LENGTH> None -<- test_runUClust() 0.049 +<- test_runUClust() 0.028 -> test_checkSeqEqual() DNA Equality> SEQ1|COUNT=1> CCACGTTTTAGTAATTAATA @@ -1061,7 +1097,7 @@ -> test_calculateDistances() <- test_calculateDistances() 0.001 -> test_countMismatches() -<- test_countMismatches() 0.002 +<- test_countMismatches() 0.001 -> test_initializeMismatchDictionary() <- test_initializeMismatchDictionary() 0.000 -> test_getFileType() @@ -1318,7 +1354,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_localAlignment() 0.056 +<- test_localAlignment() 0.026 -> test_maskSeq() TEST CUT> ID> SEQ|PRIMER=A|BARCODE=CCA @@ -1336,7 +1372,7 @@ ID> SEQ|PRIMER=A|BARCODE=CCA SEQ> CCACGTTTTAGTAATTAATA -<- test_maskSeq() 0.003 +<- test_maskSeq() 0.001 -> test_scoreAlignment() SEQ1> SEQ> CCACGTTTTAGTAATTAATA @@ -1408,7 +1444,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_scoreAlignment() 0.019 +<- test_scoreAlignment() 0.009 -> test_calculateSetError() REF> CGGCGTAA 0.4347826086956522 REF> NNNNNNNN 1.0 @@ -1451,7 +1487,7 @@ N==A> 0 A==-> 1 -==A> 0 -<- test_scoreDNA() 0.001 +<- test_scoreDNA() 0.000 -> test_scoreSeqPair() Default DNA Scores> SEQ1> CGGCGTAA @@ -1610,7 +1646,7 @@ test_deletionUnify (tests.test_UnifyHeaders.TestConvertHeaders.test_deletionUnify) ... ok ---------------------------------------------------------------------- -Ran 40 tests in 0.210s +Ran 40 tests in 0.105s OK (skipped=6) SEQ6> NNNNNNAA @@ -1969,7 +2005,7 @@ WEIGHT> 8 ERROR> 0.250000 -<- test_scoreSeqPair() 0.014 +<- test_scoreSeqPair() 0.006 -> test_weightDNA() DNA Weight> SEQ1> 8 @@ -2080,11 +2116,11 @@ SEQ4> CGNN--TA SEQ5> CGGC--AA ERROR> 0.233333 -<- test_calculateSetError() 0.001 +<- test_calculateSetError() 0.000 -> test_deleteSeqPositions() MAX_GAP=0.4> CGGCAA MAX_GAP=0.8> CGGCGTAA -<- test_deleteSeqPositions() 0.001 +<- test_deleteSeqPositions() 0.000 -> test_findGapPositions() MAX_GAP=0.4> [4, 5] MAX_GAP=0.8> [] @@ -2097,7 +2133,7 @@ MIN_QUAL=0> CGGCGTAA [90, 90, 36, 36, 16, 16, 72, 90] MIN_QUAL=20> CGGCNNAA [90, 90, 36, 36, 0, 0, 72, 90] MIN_FREQ=0.8> CGGCNNNA [90, 90, 36, 36, 0, 0, 0, 90] -<- test_qualityConsensus() 0.001 +<- test_qualityConsensus() 0.000 -> test_runCDHit() FULL_LENGTH> {1: ['SEQ1', 'SEQ2', 'SEQ3'], 2: ['SEQ4', 'SEQ5']} @@ -2105,7 +2141,7 @@ {1: ['SEQ1', 'SEQ2', 'SEQ3'], 2: ['SEQ4', 'SEQ5']} ZERO_LENGTH> None -<- test_runCDHit() 0.043 +<- test_runCDHit() 0.021 -> test_runUClust() FULL_LENGTH> {1: ['SEQ1', 'SEQ2', 'SEQ3'], 2: ['SEQ4', 'SEQ5']} @@ -2113,7 +2149,7 @@ {1: ['SEQ1', 'SEQ2', 'SEQ3'], 2: ['SEQ4', 'SEQ5']} ZERO_LENGTH> None -<- test_runUClust() 0.049 +<- test_runUClust() 0.027 -> test_checkSeqEqual() DNA Equality> SEQ1|COUNT=1> CCACGTTTTAGTAATTAATA @@ -2156,7 +2192,7 @@ OrderedDict([('ID', "Z29978_IGHV1-69*07_Homo_sapiens_F_V-REGION_1..233_233_nt_1_233+58_291_partial_in_5'_and_in_3'_")]) OrderedDict([('ID', 'AB019439_IGHV(III)-22-2*01_Homo_sapiens_P_L-PART1+V-EXON_168065..168119+168222..168262_96_nt_1_96+0_96_')]) OrderedDict([('ID', 'AE000659_TRAV11*01_Homo_sapiens_(P)_V-REGION_85121..85397_276_nt_1_276+42_318_')]) -<- test_convertGenericHeader() 0.001 +<- test_convertGenericHeader() 0.000 -> test_convertIMGTHeader() OrderedDict([('ID', 'IGHV1-18*01'), ('SPECIES', 'Homo_sapiens'), ('REGION', 'V-REGION'), ('FUNCTIONALITY', 'F'), ('PARTIAL', 'FALSE'), ('ACCESSION', 'M99641')]) OrderedDict([('ID', 'IGHV1-69*07'), ('SPECIES', 'Homo_sapiens'), ('REGION', 'V-REGION'), ('FUNCTIONALITY', 'F'), ('PARTIAL', 'TRUE'), ('ACCESSION', 'Z29978')]) @@ -2166,7 +2202,7 @@ OrderedDict([('ID', 'IGHV1-69*07')]) OrderedDict([('ID', 'IGHV(III)-22-2*01')]) OrderedDict([('ID', 'TRAV11*01')]) -<- test_convertIMGTHeader() 0.001 +<- test_convertIMGTHeader() 0.000 -> test_convertIlluminaHeader() OrderedDict([('ID', 'MISEQ:132:000000000-A2F3U:1:1101:14340:1555'), ('INDEX', 'ATCACG'), ('READ', '1')]) OrderedDict([('ID', 'HWI-EAS209_0006_FC706VJ:5:58:5894:21141'), ('INDEX', 'ATCACG'), ('READ', '1')]) @@ -2180,9 +2216,9 @@ OrderedDict([('ID', 'ERR346596.6'), ('DESC', 'BS-DSFCONTROL04:4:000000000-A3F0Y:1:1101:13220:1649/1')]) <- test_convertSRAHeader() 0.000 -> test_calculateDistances() -<- test_calculateDistances() 0.002 +<- test_calculateDistances() 0.001 -> test_countMismatches() -<- test_countMismatches() 0.004 +<- test_countMismatches() 0.002 -> test_initializeMismatchDictionary() <- test_initializeMismatchDictionary() 0.000 -> test_getFileType() @@ -2439,7 +2475,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_localAlignment() 0.085 +<- test_localAlignment() 0.028 -> test_maskSeq() TEST CUT> ID> SEQ|PRIMER=A|BARCODE=CCA @@ -2457,7 +2493,7 @@ ID> SEQ|PRIMER=A|BARCODE=CCA SEQ> CCACGTTTTAGTAATTAATA -<- test_maskSeq() 0.005 +<- test_maskSeq() 0.002 -> test_scoreAlignment() SEQ1> SEQ> CCACGTTTTAGTAATTAATA @@ -2529,7 +2565,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_scoreAlignment() 0.028 +<- test_scoreAlignment() 0.009 -> test_calculateSetError() REF> CGGCGTAA 0.4347826086956522 REF> NNNNNNNN 1.0 @@ -2572,7 +2608,7 @@ N==A> 0 A==-> 1 -==A> 0 -<- test_scoreDNA() 0.001 +<- test_scoreDNA() 0.000 -> test_scoreSeqPair() Default DNA Scores> SEQ1> CGGCGTAA @@ -2714,7 +2750,7 @@ test_deletionUnify (tests.test_UnifyHeaders.TestConvertHeaders.test_deletionUnify) ... ok ---------------------------------------------------------------------- -Ran 40 tests in 0.266s +Ran 40 tests in 0.110s OK (skipped=6) SEQ6> NNNNNNAA @@ -3090,7 +3126,7 @@ WEIGHT> 8 ERROR> 0.250000 -<- test_scoreSeqPair() 0.020 +<- test_scoreSeqPair() 0.007 -> test_weightDNA() DNA Weight> SEQ1> 8 @@ -3116,7 +3152,7 @@ ID> SEQ5|BARCODE=CCCC|SAMPLE=S2 -> SEQ5|BARCODE=CCCC|SAMPLE=S1 ID> SEQ6|BARCODE=GGGG|SAMPLE=S2 -> SEQ6|BARCODE=GGGG|SAMPLE=S2 ID> SEQ7|BARCODE=GGGG|SAMPLE=S2 -> SEQ7|BARCODE=GGGG|SAMPLE=S2 -<- test_consensusUnify() 0.002 +<- test_consensusUnify() 0.001 -> test_deletionUnify() ID> SEQ0|BARCODE=AAAA|SAMPLE=S1 -> False ID> SEQ1|BARCODE=AAAA|SAMPLE=S1 -> False @@ -3155,54 +3191,72 @@ creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12 creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Sequence.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Commandline.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Version.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Defaults.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Applications.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Annotation.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Multiprocessing.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/IO.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/ClusterSets.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/EstimateError.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/AssemblePairs.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/UnifyHeaders.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/CollapseSeq.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/BuildConsensus.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/MaskPrimers.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/ConvertHeaders.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/UnifyHeaders.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/AssemblePairs.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/ClusterSets.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Defaults.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Sequence.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Applications.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Version.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/IO.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Commandline.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Multiprocessing.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Annotation.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/PairSeq.py to PairSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AlignSets.py to AlignSets.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseLog.py to ParseLog.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/EstimateError.py to EstimateError.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-312.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Defaults.py to Defaults.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Sequence.py to Sequence.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Version.py to Version.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Applications.py to Applications.cpython-312.pyc +/usr/lib/python3.12/dist-packages/presto/Applications.py:61: SyntaxWarning: invalid escape sequence '\.' +/usr/lib/python3.12/dist-packages/presto/Applications.py:288: SyntaxWarning: invalid escape sequence '\>' byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/IO.py to IO.cpython-312.pyc /usr/lib/python3.12/dist-packages/presto/IO.py:34: SyntaxWarning: invalid escape sequence '\s' +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Sequence.py to Sequence.cpython-312.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Annotation.py to Annotation.cpython-312.pyc /usr/lib/python3.12/dist-packages/presto/Annotation.py:293: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/presto/Annotation.py:368: SyntaxWarning: invalid escape sequence '\s' @@ -3212,24 +3266,6 @@ byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Commandline.py to Commandline.cpython-312.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Multiprocessing.py to Multiprocessing.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Applications.py to Applications.cpython-312.pyc -/usr/lib/python3.12/dist-packages/presto/Applications.py:61: SyntaxWarning: invalid escape sequence '\.' -/usr/lib/python3.12/dist-packages/presto/Applications.py:288: SyntaxWarning: invalid escape sequence '\>' -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Version.py to Version.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/PairSeq.py to PairSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseLog.py to ParseLog.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/EstimateError.py to EstimateError.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AlignSets.py to AlignSets.cpython-312.pyc running install_egg_info running egg_info creating presto.egg-info @@ -3246,34 +3282,34 @@ Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ConvertHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +copying build/scripts-3.12/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/PairSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AlignSets.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ClusterSets.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ConvertHeaders.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseLog.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/MaskPrimers.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/EstimateError.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AlignSets.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/MaskPrimers.py to 755 I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/presto-0.7.2/debian/python3-presto running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. @@ -3295,73 +3331,73 @@ running install_lib creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11 creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Sequence.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Version.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/IO.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Annotation.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Defaults.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Applications.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Multiprocessing.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Commandline.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/EstimateError.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/UnifyHeaders.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/BuildConsensus.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/CollapseSeq.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/BuildConsensus.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/EstimateError.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/ClusterSets.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/ConvertHeaders.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/AssemblePairs.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/UnifyHeaders.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/MaskPrimers.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/AssemblePairs.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Multiprocessing.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/IO.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Defaults.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Applications.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Sequence.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Annotation.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Commandline.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Version.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/PairSeq.py to PairSeq.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/AlignSets.py to AlignSets.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseLog.py to ParseLog.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/EstimateError.py to EstimateError.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Defaults.py to Defaults.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Sequence.py to Sequence.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Version.py to Version.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Applications.py to Applications.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/IO.py to IO.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Sequence.py to Sequence.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Annotation.py to Annotation.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Commandline.py to Commandline.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Multiprocessing.py to Multiprocessing.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Applications.py to Applications.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Version.py to Version.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/PairSeq.py to PairSeq.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseLog.py to ParseLog.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/EstimateError.py to EstimateError.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/AlignSets.py to AlignSets.cpython-311.pyc running install_egg_info running egg_info writing presto.egg-info/PKG-INFO @@ -3375,34 +3411,34 @@ Copying presto.egg-info to /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto-0.7.2.egg-info Skipping SOURCES.txt running install_scripts -copying build/scripts-3.11/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ConvertHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +copying build/scripts-3.11/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/PairSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AlignSets.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ClusterSets.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ConvertHeaders.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseLog.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/MaskPrimers.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/EstimateError.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AlignSets.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/MaskPrimers.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/presto-0.7.2' dh_install @@ -3443,12 +3479,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3423831/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/463352 and its subdirectories -I: Current time: Thu May 30 09:25:20 -12 2024 -I: pbuilder-time-stamp: 1717104320 +I: removing directory /srv/workspace/pbuilder/3423831 and its subdirectories +I: Current time: Thu Jul 3 17:50:24 +14 2025 +I: pbuilder-time-stamp: 1751514624