Diff of the two buildlogs: -- --- b1/build.log 2024-05-22 18:58:01.780143446 +0000 +++ b2/build.log 2024-05-22 19:00:44.681205933 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed May 22 06:51:44 -12 2024 -I: pbuilder-time-stamp: 1716403904 +I: Current time: Wed Jun 25 15:21:03 +14 2025 +I: pbuilder-time-stamp: 1750814463 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -30,52 +30,84 @@ dpkg-source: info: applying remove-boost.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1529438/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 25 01:21 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='177f6bf7c248431d9d2827d9af66339d' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1529438' - PS1='# ' - PS2='> ' + INVOCATION_ID=2df5f801a43545f5ab11175dec0244e8 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1403035 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JfYd6nb4/pbuilderrc_cl2j --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JfYd6nb4/b1 --logfile b1/build.log libcifpp_5.0.7.1-3.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JfYd6nb4/pbuilderrc_FMhE --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JfYd6nb4/b2 --logfile b2/build.log libcifpp_5.0.7.1-3.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 21 07:43 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1529438/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Jun 23 14:06 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -188,7 +220,7 @@ Get: 65 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-2.1+b1 [342 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libboost-regex-dev amd64 1.83.0.2+b2 [3864 B] Get: 67 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] -Fetched 58.6 MB in 3s (17.2 MB/s) +Fetched 58.6 MB in 0s (118 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19718 files and directories currently installed.) @@ -471,7 +503,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libcifpp-5.0.7.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libcifpp_5.0.7.1-3_source.changes +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libcifpp-5.0.7.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libcifpp_5.0.7.1-3_source.changes dpkg-buildpackage: info: source package libcifpp dpkg-buildpackage: info: source version 5.0.7.1-3 dpkg-buildpackage: info: source distribution unstable @@ -534,7 +570,7 @@ -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found version "1.83.0") --- Configuring done (18.2s) +-- Configuring done (10.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -547,7 +583,7 @@ -- Build files have been written to: /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1' dh_auto_build - cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libcifpp-5.0.7.1 -B/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -559,44 +595,44 @@ make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make -f CMakeFiles/cifpp.dir/build.make CMakeFiles/cifpp.dir/build make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -[ 3%] Building CXX object CMakeFiles/cifpp.dir/src/datablock.cpp.o -[ 6%] Building CXX object CMakeFiles/cifpp.dir/src/condition.cpp.o -[ 9%] Building CXX object CMakeFiles/cifpp.dir/src/row.cpp.o -[ 12%] Building CXX object CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o -[ 18%] Building CXX object CMakeFiles/cifpp.dir/src/parser.cpp.o -[ 18%] Building CXX object CMakeFiles/cifpp.dir/src/item.cpp.o +[ 9%] Building CXX object CMakeFiles/cifpp.dir/src/datablock.cpp.o +[ 9%] Building CXX object CMakeFiles/cifpp.dir/src/category.cpp.o +[ 9%] Building CXX object CMakeFiles/cifpp.dir/src/condition.cpp.o +[ 15%] Building CXX object CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o +[ 15%] Building CXX object CMakeFiles/cifpp.dir/src/file.cpp.o +[ 21%] Building CXX object CMakeFiles/cifpp.dir/src/parser.cpp.o +[ 21%] Building CXX object CMakeFiles/cifpp.dir/src/item.cpp.o +/usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/category.cpp.o -MF CMakeFiles/cifpp.dir/src/category.cpp.o.d -o CMakeFiles/cifpp.dir/src/category.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/category.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/condition.cpp.o -MF CMakeFiles/cifpp.dir/src/condition.cpp.o.d -o CMakeFiles/cifpp.dir/src/condition.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/condition.cpp +[ 24%] Building CXX object CMakeFiles/cifpp.dir/src/row.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/datablock.cpp.o -MF CMakeFiles/cifpp.dir/src/datablock.cpp.o.d -o CMakeFiles/cifpp.dir/src/datablock.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/datablock.cpp -[ 21%] Building CXX object CMakeFiles/cifpp.dir/src/file.cpp.o +[ 30%] Building CXX object CMakeFiles/cifpp.dir/src/text.cpp.o +[ 30%] Building CXX object CMakeFiles/cifpp.dir/src/validate.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o -MF CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o.d -o CMakeFiles/cifpp.dir/src/dictionary_parser.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/dictionary_parser.cpp +[ 33%] Building CXX object CMakeFiles/cifpp.dir/src/utilities.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/file.cpp.o -MF CMakeFiles/cifpp.dir/src/file.cpp.o.d -o CMakeFiles/cifpp.dir/src/file.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/file.cpp +[ 36%] Building CXX object CMakeFiles/cifpp.dir/src/atom_type.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/item.cpp.o -MF CMakeFiles/cifpp.dir/src/item.cpp.o.d -o CMakeFiles/cifpp.dir/src/item.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/item.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/parser.cpp.o -MF CMakeFiles/cifpp.dir/src/parser.cpp.o.d -o CMakeFiles/cifpp.dir/src/parser.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/parser.cpp -[ 27%] Building CXX object CMakeFiles/cifpp.dir/src/text.cpp.o -[ 27%] Building CXX object CMakeFiles/cifpp.dir/src/validate.cpp.o -[ 30%] Building CXX object CMakeFiles/cifpp.dir/src/category.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/row.cpp.o -MF CMakeFiles/cifpp.dir/src/row.cpp.o.d -o CMakeFiles/cifpp.dir/src/row.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/row.cpp +[ 42%] Building CXX object CMakeFiles/cifpp.dir/src/compound.cpp.o +[ 42%] Building CXX object CMakeFiles/cifpp.dir/src/point.cpp.o +[ 45%] Building CXX object CMakeFiles/cifpp.dir/src/symmetry.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/validate.cpp.o -MF CMakeFiles/cifpp.dir/src/validate.cpp.o.d -o CMakeFiles/cifpp.dir/src/validate.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/validate.cpp -[ 33%] Building CXX object CMakeFiles/cifpp.dir/src/utilities.cpp.o -[ 36%] Building CXX object CMakeFiles/cifpp.dir/src/atom_type.cpp.o -[ 39%] Building CXX object CMakeFiles/cifpp.dir/src/compound.cpp.o -/usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/category.cpp.o -MF CMakeFiles/cifpp.dir/src/category.cpp.o.d -o CMakeFiles/cifpp.dir/src/category.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/category.cpp +[ 48%] Building CXX object CMakeFiles/cifpp.dir/src/model.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/text.cpp.o -MF CMakeFiles/cifpp.dir/src/text.cpp.o.d -o CMakeFiles/cifpp.dir/src/text.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/text.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/utilities.cpp.o -MF CMakeFiles/cifpp.dir/src/utilities.cpp.o.d -o CMakeFiles/cifpp.dir/src/utilities.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/utilities.cpp -[ 42%] Building CXX object CMakeFiles/cifpp.dir/src/point.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/atom_type.cpp.o -MF CMakeFiles/cifpp.dir/src/atom_type.cpp.o.d -o CMakeFiles/cifpp.dir/src/atom_type.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/atom_type.cpp +[ 57%] Building CXX object CMakeFiles/cifpp.dir/src/pdb/pdb2cif_remark_3.cpp.o +[ 57%] Building CXX object CMakeFiles/cifpp.dir/src/pdb/cif2pdb.cpp.o +[ 57%] Building CXX object CMakeFiles/cifpp.dir/src/pdb/pdb2cif.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/compound.cpp.o -MF CMakeFiles/cifpp.dir/src/compound.cpp.o.d -o CMakeFiles/cifpp.dir/src/compound.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/compound.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/point.cpp.o -MF CMakeFiles/cifpp.dir/src/point.cpp.o.d -o CMakeFiles/cifpp.dir/src/point.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/point.cpp -[ 45%] Building CXX object CMakeFiles/cifpp.dir/src/symmetry.cpp.o -[ 48%] Building CXX object CMakeFiles/cifpp.dir/src/model.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/symmetry.cpp.o -MF CMakeFiles/cifpp.dir/src/symmetry.cpp.o.d -o CMakeFiles/cifpp.dir/src/symmetry.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/symmetry.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/model.cpp.o -MF CMakeFiles/cifpp.dir/src/model.cpp.o.d -o CMakeFiles/cifpp.dir/src/model.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/model.cpp -[ 51%] Building CXX object CMakeFiles/cifpp.dir/src/pdb/cif2pdb.cpp.o -[ 54%] Building CXX object CMakeFiles/cifpp.dir/src/pdb/pdb2cif.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 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-Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/pdb/pdb2cif.cpp.o -MF CMakeFiles/cifpp.dir/src/pdb/pdb2cif.cpp.o.d -o CMakeFiles/cifpp.dir/src/pdb/pdb2cif.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/pdb/pdb2cif.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/pdb/pdb2cif_remark_3.cpp.o -MF CMakeFiles/cifpp.dir/src/pdb/pdb2cif_remark_3.cpp.o.d -o CMakeFiles/cifpp.dir/src/pdb/pdb2cif_remark_3.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/pdb/pdb2cif_remark_3.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_REGEX_STANDALONE=1 -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_BOOST_REGEX=1 -Dcifpp_EXPORTS -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT CMakeFiles/cifpp.dir/src/pdb/tls.cpp.o -MF CMakeFiles/cifpp.dir/src/pdb/tls.cpp.o.d -o CMakeFiles/cifpp.dir/src/pdb/tls.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/src/pdb/tls.cpp [ 63%] Linking CXX shared library libcifpp.so @@ -613,66 +649,66 @@ cd /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles/unit-v2-test.dir/DependInfo.cmake "--color=" make -f CMakeFiles/rename-compound-test.dir/build.make CMakeFiles/rename-compound-test.dir/depend make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -make -f CMakeFiles/sugar-test.dir/build.make CMakeFiles/sugar-test.dir/depend cd /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles/unit-3d-test.dir/DependInfo.cmake "--color=" +make -f CMakeFiles/sugar-test.dir/build.make CMakeFiles/sugar-test.dir/depend make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles/format-test.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles/model-test.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles/rename-compound-test.dir/DependInfo.cmake "--color=" +make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1 /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles/sugar-test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -make -f CMakeFiles/unit-v2-test.dir/build.make CMakeFiles/unit-v2-test.dir/build -make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make -f CMakeFiles/model-test.dir/build.make CMakeFiles/model-test.dir/build +make -f CMakeFiles/unit-3d-test.dir/build.make CMakeFiles/unit-3d-test.dir/build +make -f CMakeFiles/format-test.dir/build.make CMakeFiles/format-test.dir/build +make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -make -f CMakeFiles/rename-compound-test.dir/build.make CMakeFiles/rename-compound-test.dir/build -make -f CMakeFiles/unit-3d-test.dir/build.make CMakeFiles/unit-3d-test.dir/build make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -make -f CMakeFiles/format-test.dir/build.make CMakeFiles/format-test.dir/build make -f CMakeFiles/sugar-test.dir/build.make CMakeFiles/sugar-test.dir/build make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' +make -f CMakeFiles/unit-v2-test.dir/build.make CMakeFiles/unit-v2-test.dir/build +make -f CMakeFiles/rename-compound-test.dir/build.make CMakeFiles/rename-compound-test.dir/build make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' [ 69%] Building CXX object CMakeFiles/format-test.dir/test/format-test.cpp.o -[ 69%] Building CXX object CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o -[ 75%] Building CXX object CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o -[ 75%] Building CXX object CMakeFiles/model-test.dir/test/model-test.cpp.o -[ 78%] Building CXX object CMakeFiles/sugar-test.dir/test/sugar-test.cpp.o -[ 81%] Building CXX object CMakeFiles/rename-compound-test.dir/test/rename-compound-test.cpp.o +[ 69%] Building CXX object CMakeFiles/model-test.dir/test/model-test.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/format-test.dir/test/format-test.cpp.o -MF CMakeFiles/format-test.dir/test/format-test.cpp.o.d -o CMakeFiles/format-test.dir/test/format-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/format-test.cpp -/usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o -MF CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o.d -o CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/unit-3d-test.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/model-test.dir/test/model-test.cpp.o -MF CMakeFiles/model-test.dir/test/model-test.cpp.o.d -o CMakeFiles/model-test.dir/test/model-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/model-test.cpp -/usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o -MF CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o.d -o CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/unit-v2-test.cpp +[ 72%] Building CXX object CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o +[ 75%] Building CXX object CMakeFiles/sugar-test.dir/test/sugar-test.cpp.o +/usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o -MF CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o.d -o CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/unit-3d-test.cpp +[ 78%] Building CXX object CMakeFiles/rename-compound-test.dir/test/rename-compound-test.cpp.o +[ 81%] Building CXX object CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/sugar-test.dir/test/sugar-test.cpp.o -MF CMakeFiles/sugar-test.dir/test/sugar-test.cpp.o.d -o CMakeFiles/sugar-test.dir/test/sugar-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/sugar-test.cpp /usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/rename-compound-test.dir/test/rename-compound-test.cpp.o -MF CMakeFiles/rename-compound-test.dir/test/rename-compound-test.cpp.o.d -o CMakeFiles/rename-compound-test.dir/test/rename-compound-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/rename-compound-test.cpp +/usr/bin/c++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/libcifpp-5.0.7.1/include -I/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o -MF CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o.d -o CMakeFiles/unit-v2-test.dir/test/unit-v2-test.cpp.o -c /build/reproducible-path/libcifpp-5.0.7.1/test/unit-v2-test.cpp [ 84%] Linking CXX executable rename-compound-test /usr/bin/cmake -E cmake_link_script CMakeFiles/rename-compound-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/rename-compound-test.dir/test/rename-compound-test.cpp.o" -o rename-compound-test -Wl,-rpath,/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu libcifpp.so.5.0.7.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' [ 84%] Built target rename-compound-test -[ 87%] Linking CXX executable sugar-test -/usr/bin/cmake -E cmake_link_script CMakeFiles/sugar-test.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/sugar-test.dir/test/sugar-test.cpp.o" -o sugar-test -Wl,-rpath,/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu libcifpp.so.5.0.7.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 +[ 87%] Linking CXX executable format-test +/usr/bin/cmake -E cmake_link_script CMakeFiles/format-test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/format-test.dir/test/format-test.cpp.o" -o format-test -Wl,-rpath,/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu libcifpp.so.5.0.7.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 +make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' +[ 87%] Built target format-test [ 90%] Linking CXX executable unit-3d-test /usr/bin/cmake -E cmake_link_script CMakeFiles/unit-3d-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/unit-3d-test.dir/test/unit-3d-test.cpp.o" -o unit-3d-test -Wl,-rpath,/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu libcifpp.so.5.0.7.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -[ 90%] Built target sugar-test -make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' [ 90%] Built target unit-3d-test -[ 93%] Linking CXX executable format-test -/usr/bin/cmake -E cmake_link_script CMakeFiles/format-test.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/format-test.dir/test/format-test.cpp.o" -o format-test -Wl,-rpath,/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu libcifpp.so.5.0.7.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 +[ 93%] Linking CXX executable sugar-test +/usr/bin/cmake -E cmake_link_script CMakeFiles/sugar-test.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/sugar-test.dir/test/sugar-test.cpp.o" -o sugar-test -Wl,-rpath,/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu libcifpp.so.5.0.7.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' -[ 93%] Built target format-test +[ 93%] Built target sugar-test [ 96%] Linking CXX executable model-test /usr/bin/cmake -E cmake_link_script CMakeFiles/model-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libcifpp-5.0.7.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/model-test.dir/test/model-test.cpp.o" -o model-test -Wl,-rpath,/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu libcifpp.so.5.0.7.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 @@ -687,10 +723,10 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' dh_auto_test - cd obj-x86_64-linux-gnu && make -j20 test ARGS\+=--verbose ARGS\+=-j20 + cd obj-x86_64-linux-gnu && make -j42 test ARGS\+=--verbose ARGS\+=-j42 make[1]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j20 +/usr/bin/ctest --force-new-ctest-process --verbose -j42 UpdateCTestConfiguration from :/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu @@ -746,8 +782,8 @@ 3: *** No errors detected 3:  4: CCP4 monomers library not found, CLIBD_MON is not defined -1/6 Test #2: unit-3d-test ..................... Passed 0.02 sec -2/6 Test #3: format-test ...................... Passed 0.02 sec +1/6 Test #2: unit-3d-test ..................... Passed 0.01 sec +2/6 Test #3: format-test ...................... Passed 0.01 sec 5: CCP4 monomers library not found, CLIBD_MON is not defined 6: CCP4 monomers library not found, CLIBD_MON is not defined 1: Running 38 test cases... @@ -1416,7 +1452,7 @@ 1: 1: *** No errors detected 1:  -3/6 Test #1: unit-v2-test ..................... Passed 0.04 sec +3/6 Test #1: unit-v2-test ..................... Passed 0.02 sec 5: inconsistent mandatory value for _diffrn_refln.standard_code in dictionary 5: choosing N 4: Running 5 test cases... @@ -3651,10 +3687,6 @@ 5: _entity.pdbx_mutation 5: _entity.pdbx_fragment 5: _entity.details -4: -4: *** No errors detected -4:  -4/6 Test #4: model-test ....................... Passed 0.40 sec 5: 1 polymer man 'CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II' 15581.802 1 ? ? ? ? 5: 3 water nat water 18.015 100 ? ? ? ? 5: 4 non-polymer ? 'RENAMED RETINOIC ACID' 300.435 1 ? ? ? ? @@ -3758,6 +3790,10 @@ 5: WWPDB D_1000172215 5: # 5: Skipping validation of empty category pdbx_branch_scheme +4: +4: *** No errors detected +4:  +4/6 Test #4: model-test ....................... Passed 0.21 sec 5: data_1CBS 5: # 5: _entry.id 1CBS @@ -6087,19 +6123,19 @@ 5: PDB 1CBS 5: WWPDB D_1000172215 5: # -5/6 Test #5: rename-compound-test ............. Passed 0.48 sec +5/6 Test #5: rename-compound-test ............. Passed 0.24 sec 6: Running 2 test cases... 6: Creating new entity 10 for branched sugar 2-acetamido-2-deoxy-beta-D-glucopyranose 6: 6: *** No errors detected 6:  -6/6 Test #6: sugar-test ....................... Passed 4.77 sec +6/6 Test #6: sugar-test ....................... Passed 2.09 sec 100% tests passed, 0 tests failed out of 6 -Total Test time (real) = 4.80 sec +Total Test time (real) = 2.10 sec make[1]: Leaving directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' - rm -fr -- /tmp/dh-xdg-rundir-BmDp9ikd + rm -fr -- /tmp/dh-xdg-rundir-uJYMMl0U create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/libcifpp-dev.substvars debian/libcifpp5.substvars debian/libcifpp-data.substvars @@ -6108,7 +6144,7 @@ install -m0755 -d debian/libcifpp-data/etc/libcifpp/cache-update.d dh_auto_install install -m0755 -d /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp - cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/libcifpp-5.0.7.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/libcifpp-5.0.7.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libcifpp-5.0.7.1 -B/build/reproducible-path/libcifpp-5.0.7.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -6124,32 +6160,32 @@ -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/cifpp/cifppTargets.cmake -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/cifpp/cifppTargets-none.cmake -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++ --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/symmetry.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/point.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/gzio.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/validate.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/tls.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/io.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/pdb2cif.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/cif2pdb.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/pdb2cif_remark_3.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/text.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/utilities.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/atom_type.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/model.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/iterator.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/file.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/category.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/item.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/format.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/row.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/compound.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/datablock.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/forward_decl.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/condition.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/atom_type.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/parser.hpp --- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/item.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/text.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/datablock.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/category.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/symmetry.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/validate.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/file.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/dictionary_parser.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/condition.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/row.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/iterator.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/gzio.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/point.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/forward_decl.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/utilities.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/pdb2cif.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/tls.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/pdb2cif_remark_3.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/cif2pdb.hpp +-- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/pdb/io.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/include/cif++/exports.hpp -- Installing: /build/reproducible-path/libcifpp-5.0.7.1/debian/tmp/usr/share/libcifpp/mmcif_ddl.dic @@ -6190,15 +6226,15 @@ install -m0755 -d debian/libcifpp-data/usr/share/doc/libcifpp-data install -p -m0644 debian/copyright debian/libcifpp-data/usr/share/doc/libcifpp-data/copyright dh_installchangelogs - install -m0755 -d debian/libcifpp5/usr/share/doc/libcifpp5 - install -p -m0644 debian/.debhelper/generated/libcifpp5/dh_installchangelogs.dch.trimmed debian/libcifpp5/usr/share/doc/libcifpp5/changelog.Debian - install -p -m0644 ./changelog debian/libcifpp5/usr/share/doc/libcifpp5/changelog install -m0755 -d debian/libcifpp-dev/usr/share/doc/libcifpp-dev install -p -m0644 debian/.debhelper/generated/libcifpp-dev/dh_installchangelogs.dch.trimmed debian/libcifpp-dev/usr/share/doc/libcifpp-dev/changelog.Debian install -p -m0644 ./changelog debian/libcifpp-dev/usr/share/doc/libcifpp-dev/changelog install -m0755 -d debian/libcifpp-data/usr/share/doc/libcifpp-data install -p -m0644 debian/.debhelper/generated/libcifpp-data/dh_installchangelogs.dch.trimmed debian/libcifpp-data/usr/share/doc/libcifpp-data/changelog.Debian install -p -m0644 ./changelog debian/libcifpp-data/usr/share/doc/libcifpp-data/changelog + install -m0755 -d debian/libcifpp5/usr/share/doc/libcifpp5 + install -p -m0644 debian/.debhelper/generated/libcifpp5/dh_installchangelogs.dch.trimmed debian/libcifpp5/usr/share/doc/libcifpp5/changelog.Debian + install -p -m0644 ./changelog debian/libcifpp5/usr/share/doc/libcifpp5/changelog dh_installexamples install -m0755 -d debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples cp --reflink=auto -a ./examples/1cbs.cif.gz debian/libcifpp-dev/usr/share/doc/libcifpp-dev/examples @@ -6227,30 +6263,30 @@ cd debian/libcifpp-dev cd debian/libcifpp5 cd debian/libcifpp-data - chmod a-x usr/share/doc/libcifpp-data/changelog usr/share/doc/libcifpp-data/changelog.Debian chmod a-x usr/share/doc/libcifpp-dev/changelog usr/share/doc/libcifpp-dev/changelog.Debian + chmod a-x usr/share/doc/libcifpp5/changelog usr/share/doc/libcifpp5/changelog.Debian + chmod a-x usr/share/doc/libcifpp-data/changelog usr/share/doc/libcifpp-data/changelog.Debian gzip -9nf usr/share/doc/libcifpp-dev/changelog usr/share/doc/libcifpp-dev/changelog.Debian + gzip -9nf usr/share/doc/libcifpp5/changelog usr/share/doc/libcifpp5/changelog.Debian gzip -9nf usr/share/doc/libcifpp-data/changelog usr/share/doc/libcifpp-data/changelog.Debian - chmod a-x usr/share/doc/libcifpp5/changelog usr/share/doc/libcifpp5/changelog.Debian cd '/build/reproducible-path/libcifpp-5.0.7.1' - gzip -9nf usr/share/doc/libcifpp5/changelog usr/share/doc/libcifpp5/changelog.Debian cd '/build/reproducible-path/libcifpp-5.0.7.1' cd '/build/reproducible-path/libcifpp-5.0.7.1' dh_fixperms find debian/libcifpp-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcifpp5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcifpp-data ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s + find debian/libcifpp-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-data/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-data/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp5/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libcifpp-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcifpp-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libcifpp-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcifpp-data/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcifpp5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/libcifpp-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/libcifpp-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp-data -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcifpp5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libcifpp-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libcifpp5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcifpp-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libcifpp5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcifpp-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz -a @@ -6289,9 +6325,6 @@ ' | LC_ALL=C sort >> debian/libcifpp-data/DEBIAN/conffiles chmod 0644 -- debian/libcifpp-data/DEBIAN/conffiles dh_gencontrol - install -m0755 -d debian/libcifpp-data/DEBIAN - echo misc:Pre-Depends= >> debian/libcifpp-data.substvars - dpkg-gencontrol -plibcifpp-data -ldebian/changelog -Tdebian/libcifpp-data.substvars -cdebian/control -Pdebian/libcifpp-data install -m0755 -d debian/libcifpp-dev/DEBIAN echo misc:Depends= >> debian/libcifpp-dev.substvars echo misc:Pre-Depends= >> debian/libcifpp-dev.substvars @@ -6301,18 +6334,21 @@ echo misc:Pre-Depends= >> debian/libcifpp5.substvars install -m0755 -d debian/.debhelper/libcifpp5/dbgsym-root/DEBIAN dpkg-gencontrol -plibcifpp5 -ldebian/changelog -Tdebian/libcifpp5.substvars -cdebian/control -Pdebian/.debhelper/libcifpp5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcifpp5-dbgsym "-DDepends=libcifpp5 (= \${binary:Version})" "-DDescription=debug symbols for libcifpp5" -DBuild-Ids=db7d1828ff52f745cf6b2bb5cabfcaa95439f702 -DSection=debug -UReplaces -UBreaks + install -m0755 -d debian/libcifpp-data/DEBIAN + echo misc:Pre-Depends= >> debian/libcifpp-data.substvars + dpkg-gencontrol -plibcifpp-data -ldebian/changelog -Tdebian/libcifpp-data.substvars -cdebian/control -Pdebian/libcifpp-data chmod 0644 -- debian/libcifpp-data/DEBIAN/control - chmod 0644 -- debian/libcifpp-dev/DEBIAN/control chmod 0644 -- debian/.debhelper/libcifpp5/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcifpp5 -ldebian/changelog -Tdebian/libcifpp5.substvars -cdebian/control -Pdebian/libcifpp5 + chmod 0644 -- debian/libcifpp-dev/DEBIAN/control chmod 0644 -- debian/libcifpp5/DEBIAN/control dh_md5sums install -m0755 -d debian/libcifpp-dev/DEBIAN - install -m0755 -d debian/libcifpp5/DEBIAN install -m0755 -d debian/libcifpp-data/DEBIAN + install -m0755 -d debian/libcifpp5/DEBIAN cd debian/libcifpp-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/libcifpp-data >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libcifpp5 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/libcifpp-data >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcifpp-dev/DEBIAN/md5sums chmod 0644 -- debian/libcifpp5/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libcifpp5/dbgsym-root/DEBIAN @@ -6320,14 +6356,14 @@ chmod 0644 -- debian/libcifpp-data/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcifpp5/dbgsym-root/DEBIAN/md5sums dh_builddeb - dpkg-deb --root-owner-group --build debian/libcifpp-data .. + dpkg-deb --root-owner-group --build debian/libcifpp-dev .. dpkg-deb --root-owner-group --build debian/libcifpp5 .. -dpkg-deb: building package 'libcifpp-data' in '../libcifpp-data_5.0.7.1-3_all.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/libcifpp5/dbgsym-root .. - dpkg-deb --root-owner-group --build debian/libcifpp-dev .. + dpkg-deb --root-owner-group --build debian/libcifpp-data .. +dpkg-deb: building package 'libcifpp-dev' in '../libcifpp-dev_5.0.7.1-3_amd64.deb'. dpkg-deb: building package 'libcifpp5' in '../libcifpp5_5.0.7.1-3_amd64.deb'. dpkg-deb: building package 'libcifpp5-dbgsym' in '../libcifpp5-dbgsym_5.0.7.1-3_amd64.deb'. -dpkg-deb: building package 'libcifpp-dev' in '../libcifpp-dev_5.0.7.1-3_amd64.deb'. +dpkg-deb: building package 'libcifpp-data' in '../libcifpp-data_5.0.7.1-3_all.deb'. dpkg-genbuildinfo --build=binary -O../libcifpp_5.0.7.1-3_amd64.buildinfo dpkg-genchanges --build=binary -O../libcifpp_5.0.7.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -6335,12 +6371,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1403035/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1529438 and its subdirectories -I: Current time: Wed May 22 06:58:01 -12 2024 -I: pbuilder-time-stamp: 1716404281 +I: removing directory /srv/workspace/pbuilder/1403035 and its subdirectories +I: Current time: Wed Jun 25 15:23:43 +14 2025 +I: pbuilder-time-stamp: 1750814623