Diff of the two buildlogs: -- --- b1/build.log 2024-05-20 16:51:32.446789447 +0000 +++ b2/build.log 2024-05-20 16:52:50.719459371 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon May 20 04:49:28 -12 2024 -I: pbuilder-time-stamp: 1716223768 +I: Current time: Mon Jun 23 13:14:32 +14 2025 +I: pbuilder-time-stamp: 1750634072 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -30,52 +30,84 @@ dpkg-source: info: applying 0003-Skip-list-example-test.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2747596/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 22 23:14 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='a15318480920417491e72b9fdd37d71a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2747596' - PS1='# ' - PS2='> ' + INVOCATION_ID=f4e5a9497bd344139eea27992c7cfee3 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2734217 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lFd8Zwyk/pbuilderrc_JgwE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lFd8Zwyk/b1 --logfile b1/build.log golang-github-biogo-hts_1.4.4+dfsg1-1.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lFd8Zwyk/pbuilderrc_7Bqd --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lFd8Zwyk/b2 --logfile b2/build.log golang-github-biogo-hts_1.4.4+dfsg1-1.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 19 07:43 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2747596/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Jun 21 14:05 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -175,7 +207,7 @@ Get: 54 http://deb.debian.org/debian unstable/main amd64 golang-github-kr-pretty-dev all 0.3.1-1 [11.9 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 golang-github-ulikunitz-xz-dev all 0.5.6-2 [352 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 golang-gopkg-check.v1-dev all 0.0+git20200902.038fdea-1 [32.1 kB] -Fetched 72.1 MB in 11s (6523 kB/s) +Fetched 72.1 MB in 8s (9536 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19718 files and directories currently installed.) @@ -414,7 +446,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/golang-github-biogo-hts-1.4.4+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-biogo-hts_1.4.4+dfsg1-1_source.changes +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/golang-github-biogo-hts-1.4.4+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-biogo-hts_1.4.4+dfsg1-1_source.changes dpkg-buildpackage: info: source package golang-github-biogo-hts dpkg-buildpackage: info: source version 1.4.4+dfsg1-1 dpkg-buildpackage: info: source distribution unstable @@ -432,30 +468,30 @@ dh_autoreconf -O--buildsystem=golang dh_auto_configure -O--buildsystem=golang dh_auto_build -O--buildsystem=golang - cd obj-x86_64-linux-gnu && go install -trimpath -v -p 20 github.com/biogo/hts/bam github.com/biogo/hts/bgzf github.com/biogo/hts/bgzf/cache github.com/biogo/hts/bgzf/index github.com/biogo/hts/cram github.com/biogo/hts/cram/encoding/itf8 github.com/biogo/hts/cram/encoding/ltf8 github.com/biogo/hts/csi github.com/biogo/hts/fai github.com/biogo/hts/internal github.com/biogo/hts/sam github.com/biogo/hts/tabix -internal/goarch -internal/itoa -cmp + cd obj-x86_64-linux-gnu && go install -trimpath -v -p 42 github.com/biogo/hts/bam github.com/biogo/hts/bgzf github.com/biogo/hts/bgzf/cache github.com/biogo/hts/bgzf/index github.com/biogo/hts/cram github.com/biogo/hts/cram/encoding/itf8 github.com/biogo/hts/cram/encoding/ltf8 github.com/biogo/hts/csi github.com/biogo/hts/fai github.com/biogo/hts/internal github.com/biogo/hts/sam github.com/biogo/hts/tabix +internal/race unicode/utf8 -math/bits -internal/goos +cmp internal/unsafeheader -unicode +internal/itoa +internal/goarch internal/coverage/rtcov +internal/goos +internal/godebugs +math/bits github.com/ulikunitz/xz/internal/hash -sync/atomic internal/goexperiment -internal/godebugs +unicode +sync/atomic internal/cpu runtime/internal/atomic -internal/race runtime/internal/syscall -internal/abi -runtime/internal/sys runtime/internal/math internal/chacha8rand -github.com/biogo/hts/cram/encoding/ltf8 +internal/abi +runtime/internal/sys github.com/biogo/hts/cram/encoding/itf8 +github.com/biogo/hts/cram/encoding/ltf8 slices internal/bytealg math @@ -465,69 +501,69 @@ internal/testlog errors sort -io internal/oserror +internal/safefilepath +io path strconv -internal/safefilepath syscall -container/heap -bytes hash +bytes strings hash/crc32 -bufio +container/heap reflect +bufio compress/bzip2 internal/syscall/execenv internal/syscall/unix time +io/fs +internal/poll internal/fmtsort encoding/binary -internal/poll -io/fs os io/ioutil fmt +github.com/ulikunitz/xz/internal/xlog encoding/hex net/url -github.com/ulikunitz/xz/internal/xlog -compress/flate encoding/csv +compress/flate github.com/biogo/hts/fai github.com/ulikunitz/xz/lzma compress/gzip github.com/biogo/hts/bgzf -github.com/biogo/hts/bgzf/cache github.com/biogo/hts/bgzf/index +github.com/biogo/hts/bgzf/cache github.com/biogo/hts/internal github.com/biogo/hts/csi github.com/biogo/hts/tabix github.com/biogo/hts/sam -github.com/biogo/hts/bam github.com/biogo/hts/cram +github.com/biogo/hts/bam dh_auto_test -O--buildsystem=golang - cd obj-x86_64-linux-gnu && go test -vet=off -v -p 20 github.com/biogo/hts/bam github.com/biogo/hts/bgzf github.com/biogo/hts/bgzf/cache github.com/biogo/hts/bgzf/index github.com/biogo/hts/cram github.com/biogo/hts/cram/encoding/itf8 github.com/biogo/hts/cram/encoding/ltf8 github.com/biogo/hts/csi github.com/biogo/hts/fai github.com/biogo/hts/internal github.com/biogo/hts/sam github.com/biogo/hts/tabix + cd obj-x86_64-linux-gnu && go test -vet=off -v -p 42 github.com/biogo/hts/bam github.com/biogo/hts/bgzf github.com/biogo/hts/bgzf/cache github.com/biogo/hts/bgzf/index github.com/biogo/hts/cram github.com/biogo/hts/cram/encoding/itf8 github.com/biogo/hts/cram/encoding/ltf8 github.com/biogo/hts/csi github.com/biogo/hts/fai github.com/biogo/hts/internal github.com/biogo/hts/sam github.com/biogo/hts/tabix ? github.com/biogo/hts/bgzf/cache [no test files] ? github.com/biogo/hts/cram [no test files] ? github.com/biogo/hts/internal [no test files] === RUN Test OK: 15 passed ---- PASS: Test (0.14s) +--- PASS: Test (0.06s) === RUN TestFuzzCrashers ---- PASS: TestFuzzCrashers (1.69s) +--- PASS: TestFuzzCrashers (1.08s) === RUN TestMerger ---- PASS: TestMerger (0.11s) +--- PASS: TestMerger (0.08s) PASS -ok github.com/biogo/hts/bam 1.955s +ok github.com/biogo/hts/bam 1.235s === RUN TestEmpty --- PASS: TestEmpty (0.00s) === RUN TestEOF ---- PASS: TestEOF (0.01s) +--- PASS: TestEOF (0.00s) === RUN TestRoundTrip ---- PASS: TestRoundTrip (0.01s) +--- PASS: TestRoundTrip (0.00s) === RUN TestRoundTripMulti ---- PASS: TestRoundTripMulti (0.01s) +--- PASS: TestRoundTripMulti (0.00s) === RUN TestHeaderIssue57 --- PASS: TestHeaderIssue57 (0.00s) === RUN TestRoundTripMultiSeek @@ -535,41 +571,41 @@ === RUN TestSeekErrorDeadlock --- PASS: TestSeekErrorDeadlock (0.00s) === RUN TestSeekFast ---- PASS: TestSeekFast (0.07s) +--- PASS: TestSeekFast (0.02s) === RUN TestCache ---- PASS: TestCache (0.47s) +--- PASS: TestCache (0.15s) === RUN TestBlocked ---- PASS: TestBlocked (0.02s) +--- PASS: TestBlocked (0.00s) === RUN TestFuzzCrashers --- PASS: TestFuzzCrashers (0.01s) === RUN TestZeroNonZero ---- PASS: TestZeroNonZero (0.01s) +--- PASS: TestZeroNonZero (0.00s) === RUN TestWriteByteCount --- PASS: TestWriteByteCount (0.00s) === RUN TestSeekCacheReadahead --- PASS: TestSeekCacheReadahead (0.10s) PASS -ok github.com/biogo/hts/bgzf 0.727s +ok github.com/biogo/hts/bgzf 0.298s === RUN Test OK: 3 passed ---- PASS: Test (0.04s) +--- PASS: Test (0.01s) PASS -ok github.com/biogo/hts/bgzf/index 0.053s +ok github.com/biogo/hts/bgzf/index 0.018s === RUN TestRoundTrip --- PASS: TestRoundTrip (0.00s) === RUN TestKnownValues --- PASS: TestKnownValues (0.00s) PASS -ok github.com/biogo/hts/cram/encoding/itf8 0.016s +ok github.com/biogo/hts/cram/encoding/itf8 0.003s === RUN TestInt64RoundTrip --- PASS: TestInt64RoundTrip (0.00s) PASS -ok github.com/biogo/hts/cram/encoding/ltf8 0.012s +ok github.com/biogo/hts/cram/encoding/ltf8 0.003s === RUN Test OK: 3 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.00s) PASS -ok github.com/biogo/hts/csi 0.017s +ok github.com/biogo/hts/csi 0.005s === RUN TestNewIndex --- PASS: TestNewIndex (0.00s) === RUN TestReadFrom @@ -579,21 +615,21 @@ === RUN TestFile --- PASS: TestFile (0.00s) PASS -ok github.com/biogo/hts/fai 0.008s +ok github.com/biogo/hts/fai 0.004s === RUN Test OK: 20 passed ---- PASS: Test (0.03s) +--- PASS: Test (0.01s) === RUN TestSeqAt --- PASS: TestSeqAt (0.00s) === RUN ExampleConsume --- PASS: ExampleConsume (0.00s) PASS -ok github.com/biogo/hts/sam 0.044s +ok github.com/biogo/hts/sam 0.010s === RUN Test OK: 1 passed --- PASS: Test (0.00s) PASS -ok github.com/biogo/hts/tabix 0.011s +ok github.com/biogo/hts/tabix 0.006s create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=golang dh_prep -O--buildsystem=golang @@ -621,12 +657,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2734217/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2747596 and its subdirectories -I: Current time: Mon May 20 04:51:31 -12 2024 -I: pbuilder-time-stamp: 1716223891 +I: removing directory /srv/workspace/pbuilder/2734217 and its subdirectories +I: Current time: Mon Jun 23 13:15:47 +14 2025 +I: pbuilder-time-stamp: 1750634147