Diff of the two buildlogs: -- --- b1/build.log 2024-05-24 14:06:52.884717972 +0000 +++ b2/build.log 2024-05-24 14:10:10.232312196 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jun 26 08:27:44 -12 2025 -I: pbuilder-time-stamp: 1750969664 +I: Current time: Sat May 25 04:06:56 +14 2024 +I: pbuilder-time-stamp: 1716559616 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: unpacking golang-github-biogo-biogo_1.0.4-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3594105/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 24 14:07 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='18a0f13252b64c14b53285bf63bf43b3' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3594105' - PS1='# ' - PS2='> ' + INVOCATION_ID=7f78cc70f1764293afa5c1f9c1f30e41 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3086889 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IYmwMfg3/pbuilderrc_HieH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IYmwMfg3/b1 --logfile b1/build.log golang-github-biogo-biogo_1.0.4-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IYmwMfg3/pbuilderrc_2zZX --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IYmwMfg3/b2 --logfile b2/build.log golang-github-biogo-biogo_1.0.4-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos5-amd64 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Jun 25 14:06 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3594105/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 23 07:43 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -178,7 +210,7 @@ Get: 57 http://deb.debian.org/debian unstable/main amd64 golang-github-biogo-store-dev all 0.0~git20200525.8c94ae1-2 [34.3 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 golang-github-ulikunitz-xz-dev all 0.5.6-2 [352 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 golang-github-biogo-hts-dev all 1.4.4+dfsg1-1 [319 kB] -Fetched 72.5 MB in 6s (12.7 MB/s) +Fetched 72.5 MB in 2s (30.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19718 files and directories currently installed.) @@ -429,7 +461,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/golang-github-biogo-biogo-1.0.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-biogo-biogo_1.0.4-1_source.changes +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/golang-github-biogo-biogo-1.0.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-biogo-biogo_1.0.4-1_source.changes dpkg-buildpackage: info: source package golang-github-biogo-biogo dpkg-buildpackage: info: source version 1.0.4-1 dpkg-buildpackage: info: source distribution unstable @@ -447,32 +483,32 @@ dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -O--builddirectory=_build -O--buildsystem=golang - cd _build && go install -trimpath -v -p 42 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util -internal/unsafeheader -internal/itoa -internal/goos -math/bits + cd _build && go install -trimpath -v -p 20 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util internal/race cmp unicode -github.com/biogo/biogo -runtime/internal/atomic +encoding github.com/biogo/store/llrb -unicode/utf8 log/internal -runtime/internal/syscall -internal/goarch -encoding +internal/unsafeheader +internal/goos +unicode/utf8 +internal/itoa internal/coverage/rtcov +image/color +internal/goarch +internal/godebugs sync/atomic internal/cpu -internal/godebugs -image/color +runtime/internal/atomic +runtime/internal/syscall +github.com/biogo/biogo +math/bits internal/goexperiment -runtime/internal/math +internal/abi internal/chacha8rand +runtime/internal/math runtime/internal/sys -internal/abi slices internal/bytealg math @@ -482,83 +518,83 @@ internal/testlog internal/bisect internal/godebug +math/rand errors sort -internal/oserror -path io +strconv +internal/oserror internal/safefilepath +path github.com/biogo/store/interval -strconv -math/rand syscall container/heap -hash text/tabwriter -internal/saferio +hash strings bytes +internal/saferio hash/adler32 -github.com/biogo/biogo/feat reflect +github.com/biogo/biogo/feat bufio github.com/biogo/biogo/io/featio github.com/biogo/biogo/feat/gene -internal/syscall/execenv internal/syscall/unix +internal/syscall/execenv time -io/fs -internal/poll internal/fmtsort encoding/binary +internal/poll +io/fs os -io/ioutil fmt +io/ioutil github.com/biogo/biogo/alphabet -log +github.com/biogo/biogo/util encoding/csv -github.com/biogo/biogo/errors +encoding/gob +log github.com/biogo/graph compress/flate -github.com/biogo/biogo/util -encoding/gob -github.com/biogo/hts/fai +github.com/biogo/biogo/errors github.com/biogo/biogo/concurrent -github.com/biogo/biogo/io/seqio/fai +github.com/biogo/hts/fai github.com/biogo/biogo/seq github.com/biogo/biogo/align/matrix -compress/zlib -github.com/biogo/biogo/feat/genome -github.com/biogo/biogo/io/seqio +github.com/biogo/biogo/io/seqio/fai +github.com/biogo/biogo/align github.com/biogo/biogo/seq/linear -github.com/biogo/biogo/seq/sequtils +github.com/biogo/biogo/io/seqio +github.com/biogo/biogo/feat/genome github.com/biogo/biogo/io/featio/bed +github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/seq/quality -github.com/biogo/biogo/align github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq -github.com/biogo/biogo/complexity github.com/biogo/biogo/pwm +compress/zlib github.com/biogo/biogo/index/kmerindex -github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/seq/multi +github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/seq/alignment +github.com/biogo/biogo/complexity github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/morass github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals dh_auto_test -O--builddirectory=_build -O--buildsystem=golang - cd _build && go test -vet=off -v -p 42 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util + cd _build && go test -vet=off -v -p 20 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util ? github.com/biogo/biogo [no test files] ? github.com/biogo/biogo/align/matrix [no test files] === RUN Test OK: 2 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.02s) === RUN ExampleFitted_Align --- PASS: ExampleFitted_Align (0.00s) === RUN ExampleFittedAffine_Align @@ -574,125 +610,125 @@ === RUN ExampleSWAffine_Align --- PASS: ExampleSWAffine_Align (0.00s) PASS -ok github.com/biogo/biogo/align 0.007s +ok github.com/biogo/biogo/align 0.105s === RUN Test OK: 5 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.08s) PASS -ok github.com/biogo/biogo/align/pals 0.009s +ok github.com/biogo/biogo/align/pals 0.177s === RUN Test OK: 1 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.02s) PASS -ok github.com/biogo/biogo/align/pals/dp 0.008s +ok github.com/biogo/biogo/align/pals/dp 0.183s === RUN Test OK: 1 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.15s) PASS -ok github.com/biogo/biogo/align/pals/filter 0.009s +ok github.com/biogo/biogo/align/pals/filter 0.328s === RUN Test OK: 10 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.01s) === RUN Example_allValid --- PASS: Example_allValid (0.00s) === RUN Example_complement --- PASS: Example_complement (0.00s) PASS -ok github.com/biogo/biogo/alphabet 0.008s +ok github.com/biogo/biogo/alphabet 0.164s ? github.com/biogo/biogo/feat/genome [no test files] ? github.com/biogo/biogo/feat/genome/cow/bt7 [no test files] ? github.com/biogo/biogo/feat/genome/drosophila/dm3 [no test files] ? github.com/biogo/biogo/feat/genome/human/hg19 [no test files] ? github.com/biogo/biogo/feat/genome/mouse/mm10 [no test files] -? github.com/biogo/biogo/io/seqio/fai [no test files] -? github.com/biogo/biogo/pwm [no test files] === RUN Test OK: 4 passed ---- PASS: Test (0.32s) +--- PASS: Test (1.39s) PASS -ok github.com/biogo/biogo/complexity 0.322s +ok github.com/biogo/biogo/complexity 1.540s === RUN Test OK: 1 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.01s) === RUN ExampleMap --- PASS: ExampleMap (0.00s) === RUN ExamplePromiseMap ---- PASS: ExamplePromiseMap (1.01s) +--- PASS: ExamplePromiseMap (1.03s) === RUN ExampleLazily --- PASS: ExampleLazily (0.00s) PASS -ok github.com/biogo/biogo/concurrent 1.012s +ok github.com/biogo/biogo/concurrent 1.174s === RUN Test OK: 3 passed, 1 skipped ---- PASS: Test (0.00s) +--- PASS: Test (0.05s) PASS -ok github.com/biogo/biogo/errors 0.005s +ok github.com/biogo/biogo/errors 0.172s === RUN Test OK: 6 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.07s) PASS -ok github.com/biogo/biogo/feat 0.007s +ok github.com/biogo/biogo/feat 0.266s === RUN Test OK: 4 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.05s) PASS -ok github.com/biogo/biogo/feat/gene 0.005s +ok github.com/biogo/biogo/feat/gene 0.256s +? github.com/biogo/biogo/io/seqio/fai [no test files] +? github.com/biogo/biogo/pwm [no test files] === RUN Test OK: 5 passed ---- PASS: Test (2.34s) +--- PASS: Test (7.58s) PASS -ok github.com/biogo/biogo/index/kmerindex 2.363s +ok github.com/biogo/biogo/index/kmerindex 7.790s === RUN Test OK: 2 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.04s) PASS -ok github.com/biogo/biogo/io/featio 0.005s +ok github.com/biogo/biogo/io/featio 0.239s === RUN Test OK: 4 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.05s) PASS -ok github.com/biogo/biogo/io/featio/bed 0.007s +ok github.com/biogo/biogo/io/featio/bed 0.075s === RUN Test OK: 5 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.05s) PASS -ok github.com/biogo/biogo/io/featio/gff 0.007s +ok github.com/biogo/biogo/io/featio/gff 0.075s === RUN TestSeqio --- PASS: TestSeqio (0.00s) === RUN Test OK: 3 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.04s) PASS -ok github.com/biogo/biogo/io/seqio 0.007s +ok github.com/biogo/biogo/io/seqio 0.082s === RUN Test OK: 2 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.04s) PASS -ok github.com/biogo/biogo/io/seqio/alignio 0.006s +ok github.com/biogo/biogo/io/seqio/alignio 0.086s === RUN Test OK: 2 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.06s) === RUN ExampleReader --- PASS: ExampleReader (0.00s) PASS -ok github.com/biogo/biogo/io/seqio/fasta 0.007s +ok github.com/biogo/biogo/io/seqio/fasta 0.100s === RUN Test OK: 2 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.06s) PASS -ok github.com/biogo/biogo/io/seqio/fastq 0.007s +ok github.com/biogo/biogo/io/seqio/fastq 0.114s === RUN Test OK: 7 passed ---- PASS: Test (11.88s) +--- PASS: Test (17.61s) PASS -ok github.com/biogo/biogo/morass 11.887s +ok github.com/biogo/biogo/morass 17.675s === RUN TestSeq --- PASS: TestSeq (0.00s) PASS -ok github.com/biogo/biogo/seq 0.004s +ok github.com/biogo/biogo/seq 0.084s === RUN Test OK: 1 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.01s) === RUN ExampleNewSeq --- PASS: ExampleNewSeq (0.00s) === RUN ExampleSeq_Add @@ -730,10 +766,10 @@ === RUN ExampleQSeq_truncate --- PASS: ExampleQSeq_truncate (0.00s) PASS -ok github.com/biogo/biogo/seq/alignment 0.009s +ok github.com/biogo/biogo/seq/alignment 0.058s === RUN Test OK: 1 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.02s) === RUN ExampleNewQSeq --- PASS: ExampleNewQSeq (0.00s) === RUN ExampleQSeq_Validate @@ -757,10 +793,10 @@ === RUN ExampleSeq_compose --- PASS: ExampleSeq_compose (0.00s) PASS -ok github.com/biogo/biogo/seq/linear 0.008s +ok github.com/biogo/biogo/seq/linear 0.252s === RUN Test OK: 1 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.01s) === RUN ExampleNewMulti --- PASS: ExampleNewMulti (0.00s) === RUN ExampleMulti_Add @@ -790,15 +826,15 @@ === RUN ExampleSet_Len --- PASS: ExampleSet_Len (0.00s) PASS -ok github.com/biogo/biogo/seq/multi 0.007s +ok github.com/biogo/biogo/seq/multi 0.044s === RUN Test OK: 1 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.02s) PASS -ok github.com/biogo/biogo/seq/quality 0.006s +ok github.com/biogo/biogo/seq/quality 0.236s === RUN Test OK: 4 passed ---- PASS: Test (0.00s) +--- PASS: Test (0.03s) === RUN ExampleTruncate_a --- PASS: ExampleTruncate_a (0.00s) === RUN ExampleTruncate_b @@ -808,12 +844,12 @@ === RUN ExampleStitch --- PASS: ExampleStitch (0.00s) PASS -ok github.com/biogo/biogo/seq/sequtils 0.007s +ok github.com/biogo/biogo/seq/sequtils 0.260s === RUN Test OK: 11 passed ---- PASS: Test (0.01s) +--- PASS: Test (0.27s) PASS -ok github.com/biogo/biogo/util 0.013s +ok github.com/biogo/biogo/util 0.296s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang @@ -840,12 +876,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3086889/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3594105 and its subdirectories -I: Current time: Thu Jun 26 08:29:52 -12 2025 -I: pbuilder-time-stamp: 1750969792 +I: removing directory /srv/workspace/pbuilder/3086889 and its subdirectories +I: Current time: Sat May 25 04:10:08 +14 2024 +I: pbuilder-time-stamp: 1716559808