Diff of the two buildlogs: -- --- b1/build.log 2021-07-24 15:00:57.469700242 +0000 +++ b2/build.log 2021-07-24 15:06:42.252679583 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jul 24 02:47:35 -12 2021 -I: pbuilder-time-stamp: 1627138055 +I: Current time: Sun Jul 25 05:01:12 +14 2021 +I: pbuilder-time-stamp: 1627138872 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./python-cobra_0.21.0-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.9seQo2FP/trustedkeys.kbx': General error -gpgv: Signature made Mon Feb 8 20:07:59 2021 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.a5UXPaly/trustedkeys.kbx': General error +gpgv: Signature made Tue Feb 9 22:07:59 2021 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -31,135 +31,169 @@ dpkg-source: info: applying xfail_test_show_versions.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/26999/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1507/tmp/hooks/D01_modify_environment starting +debug: Running on virt64a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1507/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1507/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=4' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='f2b5e74d1f98451cb519b862919a1e8b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='26999' - PS1='# ' - PS2='> ' + INVOCATION_ID=f05bcb0818974fe1a4434e4ebbec19a5 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1507 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.qtjbxUSv2m/pbuilderrc_pN64 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.qtjbxUSv2m/b1 --logfile b1/build.log python-cobra_0.21.0-1.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:8000/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.qtjbxUSv2m/pbuilderrc_1mUw --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.qtjbxUSv2m/b2 --logfile b2/build.log --extrapackages usrmerge python-cobra_0.21.0-1.dsc' + SUDO_GID=114 + SUDO_UID=108 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:8000/ I: uname -a - Linux wbq0 5.10.0-8-armmp #1 SMP Debian 5.10.46-2 (2021-07-20) armv7l GNU/Linux + Linux i-capture-the-hostname 5.10.0-8-arm64 #1 SMP Debian 5.10.46-2 (2021-07-20) aarch64 GNU/Linux I: ls -l /bin total 3580 - -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat - -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown - -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp - -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash - -rwxr-xr-x 1 root root 75880 Sep 22 2020 date - -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd - -rwxr-xr-x 1 root root 59912 Sep 22 2020 df - -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir - -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 22496 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt - -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount - -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe - -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip - -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln - -rwxr-xr-x 1 root root 35068 Feb 7 2020 login - -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls - -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk - -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more - -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount - -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint - -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash - -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm - -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jul 20 21:26 sh -> dash - -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty - -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su - -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync - -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar - -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch - -rwxr-xr-x 1 root root 22496 Sep 22 2020 true - -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server - -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount - -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress - -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless - -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew -I: user script /srv/workspace/pbuilder/26999/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 816764 Jun 22 16:26 bash + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 9636 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 26668 Sep 23 2020 cat + -rwxr-xr-x 1 root root 43104 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 38984 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 43112 Sep 23 2020 chown + -rwxr-xr-x 1 root root 92616 Sep 23 2020 cp + -rwxr-xr-x 1 root root 75524 Dec 11 2020 dash + -rwxr-xr-x 1 root root 75880 Sep 23 2020 date + -rwxr-xr-x 1 root root 55436 Sep 23 2020 dd + -rwxr-xr-x 1 root root 59912 Sep 23 2020 df + -rwxr-xr-x 1 root root 96764 Sep 23 2020 dir + -rwxr-xr-x 1 root root 55012 Feb 8 04:38 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 22508 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 22496 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 47492 Feb 8 04:38 findmnt + -rwsr-xr-x 1 root root 26076 Feb 27 06:12 fusermount + -rwxr-xr-x 1 root root 124508 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe + -rwxr-xr-x 1 root root 64212 Mar 3 13:30 gzip + -rwxr-xr-x 1 root root 13784 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 43180 Sep 23 2020 ln + -rwxr-xr-x 1 root root 35068 Feb 8 2020 login + -rwxr-xr-x 1 root root 96764 Sep 23 2020 ls + -rwxr-xr-x 1 root root 99940 Feb 8 04:38 lsblk + -rwxr-xr-x 1 root root 51408 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 43184 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 30780 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 34408 Feb 8 04:38 more + -rwsr-xr-x 1 root root 34400 Feb 8 04:38 mount + -rwxr-xr-x 1 root root 9824 Feb 8 04:38 mountpoint + -rwxr-xr-x 1 root root 88524 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 26652 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Jun 22 16:26 rbash -> bash + -rwxr-xr-x 1 root root 30740 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 43104 Sep 23 2020 rm + -rwxr-xr-x 1 root root 30732 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 14144 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 76012 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 25 05:01 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 23 23:26 sh.distrib -> dash + -rwxr-xr-x 1 root root 22532 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 55360 Sep 23 2020 stty + -rwsr-xr-x 1 root root 46704 Feb 8 04:38 su + -rwxr-xr-x 1 root root 22532 Sep 23 2020 sync + -rwxr-xr-x 1 root root 340872 Feb 17 23:55 tar + -rwxr-xr-x 1 root root 9808 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 67696 Sep 23 2020 touch + -rwxr-xr-x 1 root root 22496 Sep 23 2020 true + -rwxr-xr-x 1 root root 9636 Feb 27 06:12 ulockmgr_server + -rwsr-xr-x 1 root root 22108 Feb 8 04:38 umount + -rwxr-xr-x 1 root root 22520 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress + -rwxr-xr-x 1 root root 96764 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 38512 Feb 8 04:38 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless + -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew +I: user script /srv/workspace/pbuilder/1507/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -424,7 +458,7 @@ Get: 171 http://deb.debian.org/debian bullseye/main armhf python3-sbml5 armhf 5.19.0+dfsg-1 [2963 kB] Get: 172 http://deb.debian.org/debian bullseye/main armhf python3-simplejson armhf 3.17.2-1 [59.5 kB] Get: 173 http://deb.debian.org/debian bullseye/main armhf python3-tabulate all 0.8.7-0.1 [33.8 kB] -Fetched 84.9 MB in 12s (7269 kB/s) +Fetched 84.9 MB in 8s (11.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) @@ -1158,8 +1192,45 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 157 kB of additional disk space will be used. +Get:1 http://deb.debian.org/debian bullseye/main armhf libnumber-compare-perl all 0.03-1.1 [6956 B] +Get:2 http://deb.debian.org/debian bullseye/main armhf libtext-glob-perl all 0.11-1 [8888 B] +Get:3 http://deb.debian.org/debian bullseye/main armhf libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://deb.debian.org/debian bullseye/main armhf usrmerge all 25 [13.0 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (901 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 31353 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1.1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... +Unpacking libtext-glob-perl (0.11-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_25_all.deb ... +Unpacking usrmerge (25) ... +Setting up libtext-glob-perl (0.11-1) ... +Setting up libnumber-compare-perl (0.03-1.1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (25) ... +The system has been successfully converted. +Processing triggers for man-db (2.9.4-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/python-cobra-0.21.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-cobra_0.21.0-1_source.changes +hostname: Name or service not known +I: Running cd /build/python-cobra-0.21.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-cobra_0.21.0-1_source.changes dpkg-buildpackage: info: source package python-cobra dpkg-buildpackage: info: source version 0.21.0-1 dpkg-buildpackage: info: source distribution unstable @@ -1169,7 +1240,7 @@ debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean -make[1]: Entering directory '/build/python-cobra-0.21.0' +make[1]: ingresso nella directory «/build/python-cobra-0.21.0» dh_auto_clean I: pybuild base:232: python3.9 setup.py clean running clean @@ -1178,7 +1249,7 @@ 'build/scripts-3.9' does not exist -- can't clean it rm -f cobra/solvers/cglpk.c rm -rf .pytest_cache -make[1]: Leaving directory '/build/python-cobra-0.21.0' +make[1]: uscita dalla directory «/build/python-cobra-0.21.0» dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary @@ -1195,118 +1266,118 @@ creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra copying src/cobra/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra copying src/cobra/exceptions.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra +creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation +copying src/cobra/manipulation/validate.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation +copying src/cobra/manipulation/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation +copying src/cobra/manipulation/delete.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation +copying src/cobra/manipulation/modify.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation +copying src/cobra/manipulation/annotate.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation +creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/model.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/solution.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/dictlist.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/reaction.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/gene.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/object.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/configuration.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/group.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/singleton.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/formula.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/species.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +copying src/cobra/core/metabolite.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core +creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test +copying src/cobra/test/test_manipulation.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test +copying src/cobra/test/conftest.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test +copying src/cobra/test/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test +copying src/cobra/test/test_medium.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test +creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/geometric.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/reaction.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/room.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/helpers.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/deletion.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/variability.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/moma.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/gapfilling.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis +copying src/cobra/flux_analysis/fastcc.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util -copying src/cobra/util/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util -copying src/cobra/util/solver.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util copying src/cobra/util/util.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util -copying src/cobra/util/context.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util copying src/cobra/util/array.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util +copying src/cobra/util/context.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util +copying src/cobra/util/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util +copying src/cobra/util/solver.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io +copying src/cobra/io/yaml.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io +copying src/cobra/io/json.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io +copying src/cobra/io/dict.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io copying src/cobra/io/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io copying src/cobra/io/sbml.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io -copying src/cobra/io/dict.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io copying src/cobra/io/mat.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io -copying src/cobra/io/yaml.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io -copying src/cobra/io/json.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io -creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/room.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/reaction.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/variability.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/gapfilling.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/geometric.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/moma.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/fastcc.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/helpers.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis -copying src/cobra/flux_analysis/deletion.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary -copying src/cobra/summary/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary copying src/cobra/summary/model_summary.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary +copying src/cobra/summary/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary copying src/cobra/summary/metabolite_summary.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary copying src/cobra/summary/summary.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary copying src/cobra/summary/reaction_summary.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary -creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling -copying src/cobra/sampling/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling -copying src/cobra/sampling/optgp.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling -copying src/cobra/sampling/achr.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling -copying src/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling -copying src/cobra/sampling/sampling.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling -creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test -copying src/cobra/test/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test -copying src/cobra/test/conftest.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test -copying src/cobra/test/test_manipulation.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test -copying src/cobra/test/test_medium.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test -creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation -copying src/cobra/manipulation/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation -copying src/cobra/manipulation/modify.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation -copying src/cobra/manipulation/annotate.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation -copying src/cobra/manipulation/validate.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation -copying src/cobra/manipulation/delete.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation -creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/metabolite.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/reaction.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/group.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/species.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/solution.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/singleton.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/model.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/object.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/dictlist.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/configuration.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/gene.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core -copying src/cobra/core/formula.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium +copying src/cobra/medium/minimal_medium.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium copying src/cobra/medium/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium copying src/cobra/medium/boundary_types.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium copying src/cobra/medium/annotations.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium -copying src/cobra/medium/minimal_medium.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium +creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling +copying src/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling +copying src/cobra/sampling/sampling.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling +copying src/cobra/sampling/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling +copying src/cobra/sampling/optgp.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling +copying src/cobra/sampling/achr.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web -copying src/cobra/io/web/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web -copying src/cobra/io/web/bigg_models_repository.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web -copying src/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web copying src/cobra/io/web/load.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web +copying src/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web +copying src/cobra/io/web/__init__.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web copying src/cobra/io/web/abstract_model_repository.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web +copying src/cobra/io/web/bigg_models_repository.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web copying src/cobra/io/schema_v1.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io creating /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/invalid0.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/annotation.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/validation.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/invalid0.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/example_notes.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/JSON_with_inf_bounds.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/mini_fbc1.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/raven.mat -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/mini.yml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/mini.mat -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/mini_fbc2.xml.bz2 -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/textbook.xml.gz -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/validation.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/mini_cobra.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/valid_annotation_format.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/e_coli_core.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/iJO1366.xml.gz -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/mini.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/salmonella.media -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/mini_fbc2.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/textbook_pfba_fva.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/mini.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/mini_fbc2.xml.gz -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/raven.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/update_pickles.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/fbc_ex2.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/fbc_ex1.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/salmonella.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/iJO1366.xml.gz -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/invalid1.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/valid_annotation_format.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/invalid2.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/invalid_annotation_format.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/salmonella.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/mini.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/valid_annotation_output.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/mini.mat -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/mini_fbc2.xml.bz2 -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/salmonella.genes -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/textbook_solution.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/textbook.xml.gz -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/fbc_ex1.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/fbc_ex2.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/example_notes.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/mini.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/iJO1366.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/update_pickles.py -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/mini_cobra.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/textbook_pfba_fva.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/raven.mat -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/salmonella.genes -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/mini.yml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/valid_annotation_output.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/invalid_annotation_format.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/invalid2.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data copying src/cobra/test/data/textbook_fva.json -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/salmonella.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data -copying src/cobra/test/data/mini_fbc2.xml -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/raven.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data +copying src/cobra/test/data/salmonella.pickle -> /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data dh_auto_test -O--buildsystem=pybuild I: pybuild base:232: cd /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build; python3.9 -m pytest ============================= test session starts ============================== @@ -1361,7 +1432,7 @@ /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/model.py:298: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead logger.warn( -.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py: 27 warnings +.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py: 54 warnings /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/minimal_medium.py:104: DeprecationWarning: The default dtype for empty Series will be 'object' instead of 'float64' in a future version. Specify a dtype explicitly to silence this warning. medium = pd.Series() @@ -1371,17 +1442,17 @@ -- Docs: https://docs.pytest.org/en/stable/warnings.html - Computing stats ... Computing stats ... group 1/1 Computing stats ... group 1/1: min Computing stats ... group 1/1: min (1/2) Computing stats ... group 1/1: min (2/2) Computing stats ... group 1/1: min (1/2) Computing stats ... group 1/1: min (2/2) Computing stats ... group 1/1: max Computing stats ... group 1/1: max (1/2) Computing stats ... group 1/1: max (2/2) Computing stats ... group 1/1: max (1/2) Computing stats ... group 1/1: max (2/2) Computing stats ... group 1/1: mean Computing stats ... group 1/1: mean (1/2) Computing stats ... group 1/1: mean (2/2) Computing stats ... group 1/1: mean (1/2) Computing stats ... group 1/1: mean (2/2) Computing stats ... group 1/1: median Computing stats ... group 1/1: median (1/2) Computing stats ... group 1/1: median (2/2) Computing stats ... group 1/1: median (1/2) Computing stats ... group 1/1: median (2/2) Computing stats ... group 1/1: iqr Computing stats ... group 1/1: iqr (1/2) Computing stats ... group 1/1: iqr (2/2) Computing stats ... group 1/1: iqr (1/2) Computing stats ... group 1/1: iqr (2/2) Computing stats ... group 1/1: stddev Computing stats ... group 1/1: stddev (1/2) Computing stats ... group 1/1: stddev (2/2) Computing stats ... group 1/1: stddev (1/2) Computing stats ... group 1/1: stddev (2/2) Computing stats ... group 1/1: ops Computing stats ... group 1/1: ops (1/2) Computing stats ... group 1/1: ops (2/2) Computing stats ... group 1/1: ops (1/2) Computing stats ... group 1/1: ops (2/2) Computing stats ... group 1/1: ops: outliers Computing stats ... group 1/1: ops: outliers (1/2) Computing stats ... group 1/1: ops: outliers (2/2) Computing stats ... group 1/1: ops: rounds Computing stats ... group 1/1: ops: rounds (1/2) Computing stats ... group 1/1: ops: rounds (2/2) Computing stats ... group 1/1: ops: iterations Computing stats ... group 1/1: ops: iterations (1/2) Computing stats ... group 1/1: ops: iterations (2/2) ---------------------------------------------------------------------------------------- benchmark: 2 tests ---------------------------------------------------------------------------------------- -Name (time in ms) Min Max Mean StdDev Median IQR Outliers OPS Rounds Iterations ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -test_benchmark_medium_mip 162.9577 (1.0) 173.9690 (1.0) 168.2704 (1.0) 4.4896 (1.0) 167.7283 (1.0) 8.5856 (1.0) 3;0 5.9428 (1.0) 6 1 -test_benchmark_medium_linear 171.1383 (1.05) 183.3286 (1.05) 176.1856 (1.05) 5.4456 (1.21) 174.3137 (1.04) 10.6847 (1.24) 2;0 5.6758 (0.96) 6 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + Computing stats ... Computing stats ... group 1/1 Computing stats ... group 1/1: min Computing stats ... group 1/1: min (1/2) Computing stats ... group 1/1: min (2/2) Computing stats ... group 1/1: min (1/2) Computing stats ... group 1/1: min (2/2) Computing stats ... group 1/1: max Computing stats ... group 1/1: max (1/2) Computing stats ... group 1/1: max (2/2) Computing stats ... group 1/1: max (1/2) Computing stats ... group 1/1: max (2/2) Computing stats ... group 1/1: mean Computing stats ... group 1/1: mean (1/2) Computing stats ... group 1/1: mean (2/2) Computing stats ... group 1/1: mean (1/2) Computing stats ... group 1/1: mean (2/2) Computing stats ... group 1/1: median Computing stats ... group 1/1: median (1/2) Computing stats ... group 1/1: median (2/2) Computing stats ... group 1/1: median (1/2) Computing stats ... group 1/1: median (2/2) Computing stats ... group 1/1: iqr Computing stats ... group 1/1: iqr (1/2) Computing stats ... group 1/1: iqr (2/2) Computing stats ... group 1/1: iqr (1/2) Computing stats ... group 1/1: iqr (2/2) Computing stats ... group 1/1: stddev Computing stats ... group 1/1: stddev (1/2) Computing stats ... group 1/1: stddev (2/2) Computing stats ... group 1/1: stddev (1/2) Computing stats ... group 1/1: stddev (2/2) Computing stats ... group 1/1: ops Computing stats ... group 1/1: ops (1/2) Computing stats ... group 1/1: ops (2/2) Computing stats ... group 1/1: ops (1/2) Computing stats ... group 1/1: ops (2/2) Computing stats ... group 1/1: ops: outliers Computing stats ... group 1/1: ops: outliers (1/2) Computing stats ... group 1/1: ops: outliers (2/2) Computing stats ... group 1/1: ops: rounds Computing stats ... group 1/1: ops: rounds (1/2) Computing stats ... group 1/1: ops: rounds (2/2) Computing stats ... group 1/1: ops: iterations Computing stats ... group 1/1: ops: iterations (1/2) Computing stats ... group 1/1: ops: iterations (2/2) ---------------------------------------------------------------------------------------- benchmark: 2 tests --------------------------------------------------------------------------------------- +Name (time in ms) Min Max Mean StdDev Median IQR Outliers OPS Rounds Iterations +--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- +test_benchmark_medium_mip 47.5168 (1.0) 149.8213 (1.0) 65.2890 (1.0) 24.9231 (1.0) 53.8638 (1.0) 20.4791 (1.0) 2;2 15.3165 (1.0) 21 1 +test_benchmark_medium_linear 49.9094 (1.05) 153.2472 (1.02) 72.0276 (1.10) 26.5110 (1.06) 61.4126 (1.14) 27.2066 (1.33) 2;1 13.8836 (0.91) 18 1 +--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Legend: Outliers: 1 Standard Deviation from Mean; 1.5 IQR (InterQuartile Range) from 1st Quartile and 3rd Quartile. OPS: Operations Per Second, computed as 1 / Mean -======================= 28 passed, 45 warnings in 52.61s ======================= +======================= 28 passed, 72 warnings in 27.54s ======================= create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -1396,268 +1467,268 @@ creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9 creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/.benchmarks creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/validate.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/delete.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/modify.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/annotate.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/delete.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/validate.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/modify.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/model.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/solution.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/dictlist.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/reaction.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/gene.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/object.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/configuration.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/group.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/singleton.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/formula.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/species.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/configuration.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/metabolite.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/group.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/solution.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/singleton.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/object.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/formula.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/reaction.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/model.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/gene.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/species.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/dictlist.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/metabolite.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_manipulation.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/annotation.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid0.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/example_notes.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/JSON_with_inf_bounds.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc1.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.mat -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.bz2 -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook.xml.gz -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/validation.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_cobra.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/valid_annotation_format.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/e_coli_core.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.media -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_pfba_fva.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.gz -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/update_pickles.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex2.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex1.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.xml.gz -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid1.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_solution.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/raven.mat -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.genes -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.yml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/valid_annotation_output.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid_annotation_format.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid2.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_fva.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/raven.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/conftest.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/test_medium.cpython-39-pytest-6.0.2.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/conftest.cpython-39-pytest-6.0.2.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/test_manipulation.cpython-39-pytest-6.0.2.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/geometric.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/reaction.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/room.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/helpers.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/deletion.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/variability.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/moma.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/gapfilling.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/variability.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/geometric.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/phenotype_phase_plane.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/parsimonious.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/deletion.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/fastcc.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/util.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/array.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/context.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/solver.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/util.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/context.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/solver.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/array.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/solver.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/util.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/context.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/array.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/exceptions.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/exceptions.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/util.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/context.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__ creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/mat.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/json.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/dict.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/yaml.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/sbml.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/sbml.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/schema_v1.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/load.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/abstract_model_repository.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/bigg_models_repository.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/abstract_model_repository.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/load.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/bigg_models_repository.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/bigg_models_repository.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/biomodels_repository.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/load.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/abstract_model_repository.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/dict.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/mat.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/yaml.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/json.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/room.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/loopless.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/reaction.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/deletion.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/phenotype_phase_plane.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/geometric.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/parsimonious.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/variability.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/variability.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/gapfilling.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/geometric.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/parsimonious.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/moma.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/fastcc.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/helpers.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/deletion.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/dict.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/sbml.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/schema_v1.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/mat.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/json.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/sbml.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/mat.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/yaml.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/dict.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__ creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/model_summary.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/metabolite_summary.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/summary.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/summary.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/metabolite_summary.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/model_summary.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/reaction_summary.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/summary.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/model_summary.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/metabolite_summary.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/summary.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/reaction_summary.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/optgp.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/achr.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/achr.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/optgp.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/sampling.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/sampling.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/test_medium.cpython-39-pytest-6.0.2.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/conftest.cpython-39-pytest-6.0.2.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/test_manipulation.cpython-39-pytest-6.0.2.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__ -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid0.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/annotation.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/validation.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/JSON_with_inf_bounds.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc1.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/raven.mat -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.yml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/e_coli_core.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.xml.gz -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.media -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.gz -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/raven.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid1.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/valid_annotation_format.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid2.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid_annotation_format.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/valid_annotation_output.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.mat -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.bz2 -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.genes -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_solution.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook.xml.gz -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex1.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex2.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/example_notes.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.pickle -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/update_pickles.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_cobra.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_pfba_fva.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_fva.json -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/conftest.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_manipulation.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/modify.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/modify.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/validate.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/delete.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/annotate.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/validate.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/delete.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/metabolite.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/reaction.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/model.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/gene.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/configuration.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/reaction.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/dictlist.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/solution.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/formula.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/singleton.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/metabolite.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/group.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/object.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/species.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/group.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/species.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/solution.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/singleton.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/model.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/object.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/dictlist.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/configuration.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/gene.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/formula.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/exceptions.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/exceptions.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__ creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/minimal_medium.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/boundary_types.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/annotations.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__ copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/minimal_medium.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__ -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/boundary_types.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/annotations.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium -copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/minimal_medium.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/solver.py to solver.cpython-39.pyc +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/hr_sampler.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/sampling.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__init__.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/optgp.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/sampling.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/__init__.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/optgp.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/achr.cpython-39.pyc -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__ +copying /build/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/achr.py -> /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling +creating /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/.benchmarks +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/validate.py to validate.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/delete.py to delete.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/modify.py to modify.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/annotate.py to annotate.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/model.py to model.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/solution.py to solution.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/dictlist.py to dictlist.cpython-39.pyc +/usr/lib/python3.9/dist-packages/cobra/core/dictlist.py:215: SyntaxWarning: "is" with a literal. Did you mean "=="? +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/reaction.py to reaction.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/gene.py to gene.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/object.py to object.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/configuration.py to configuration.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/group.py to group.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/singleton.py to singleton.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/formula.py to formula.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/species.py to species.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/metabolite.py to metabolite.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_manipulation.py to test_manipulation.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data/update_pickles.py to update_pickles.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/conftest.py to conftest.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_medium.py to test_medium.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/geometric.py to geometric.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/reaction.py to reaction.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/room.py to room.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/helpers.py to helpers.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/deletion.py to deletion.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/variability.py to variability.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/loopless.py to loopless.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/fastcc.py to fastcc.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/util.py to util.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/context.py to context.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/array.py to array.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/exceptions.py to exceptions.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/sbml.py to sbml.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/bigg_models_repository.py to bigg_models_repository.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/context.py to context.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/solver.py to solver.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/load.py to load.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/abstract_model_repository.py to abstract_model_repository.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/dict.py to dict.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/mat.py to mat.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/bigg_models_repository.py to bigg_models_repository.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/yaml.py to yaml.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/json.py to json.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/room.py to room.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/loopless.py to loopless.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/reaction.py to reaction.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/variability.py to variability.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/geometric.py to geometric.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/fastcc.py to fastcc.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/helpers.py to helpers.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/deletion.py to deletion.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/dict.py to dict.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/sbml.py to sbml.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/mat.py to mat.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/model_summary.py to model_summary.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/metabolite_summary.py to metabolite_summary.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/summary.py to summary.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/reaction_summary.py to reaction_summary.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/optgp.py to optgp.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/achr.py to achr.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/sampling.py to sampling.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data/update_pickles.py to update_pickles.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/conftest.py to conftest.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_manipulation.py to test_manipulation.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_medium.py to test_medium.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/modify.py to modify.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/annotate.py to annotate.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/validate.py to validate.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/delete.py to delete.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/metabolite.py to metabolite.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/reaction.py to reaction.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/group.py to group.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/species.py to species.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/solution.py to solution.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/singleton.py to singleton.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/model.py to model.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/object.py to object.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/dictlist.py to dictlist.cpython-39.pyc -/usr/lib/python3.9/dist-packages/cobra/core/dictlist.py:215: SyntaxWarning: "is" with a literal. Did you mean "=="? -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/configuration.py to configuration.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/gene.py to gene.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/formula.py to formula.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/exceptions.py to exceptions.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/boundary_types.py to boundary_types.cpython-39.pyc byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/annotations.py to annotations.cpython-39.pyc -byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/sampling.py to sampling.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/optgp.py to optgp.cpython-39.pyc +byte-compiling /build/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/achr.py to achr.cpython-39.pyc running install_egg_info running egg_info creating src/cobra.egg-info @@ -1673,11 +1744,11 @@ Skipping SOURCES.txt running install_scripts debian/rules override_dh_install -make[1]: Entering directory '/build/python-cobra-0.21.0' +make[1]: ingresso nella directory «/build/python-cobra-0.21.0» dh_install -X update_pickles.py --package=python-cobra-data dh_install --remaining-packages find debian -name __pycache__ | xargs rm -rf -make[1]: Leaving directory '/build/python-cobra-0.21.0' +make[1]: uscita dalla directory «/build/python-cobra-0.21.0» dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild @@ -1699,8 +1770,8 @@ dpkg-gencontrol: warning: Depends field of package python3-cobra: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'python-cobra-data' in '../python-cobra-data_0.21.0-1_all.deb'. -dpkg-deb: building package 'python3-cobra' in '../python3-cobra_0.21.0-1_armhf.deb'. +dpkg-deb: generazione del pacchetto "python-cobra-data" in "../python-cobra-data_0.21.0-1_all.deb". +dpkg-deb: generazione del pacchetto "python3-cobra" in "../python3-cobra_0.21.0-1_armhf.deb". dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-cobra_0.21.0-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1708,12 +1779,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1507/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1507/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/26999 and its subdirectories -I: Current time: Sat Jul 24 03:00:53 -12 2021 -I: pbuilder-time-stamp: 1627138853 +I: removing directory /srv/workspace/pbuilder/1507 and its subdirectories +I: Current time: Sun Jul 25 05:06:34 +14 2021 +I: pbuilder-time-stamp: 1627139194