Diff of the two buildlogs: -- --- b1/build.log 2021-08-23 21:19:22.249578722 +0000 +++ b2/build.log 2021-08-23 21:21:51.128018680 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Aug 23 09:17:15 -12 2021 -I: pbuilder-time-stamp: 1629753435 +I: Current time: Tue Aug 24 11:19:37 +14 2021 +I: pbuilder-time-stamp: 1629753577 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./proftmb_1.1.12-9.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.cPO9CUH7/trustedkeys.kbx': General error -gpgv: Signature made Wed Nov 25 19:13:30 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.krFN0XLb/trustedkeys.kbx': General error +gpgv: Signature made Thu Nov 26 21:13:30 2020 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -30,135 +30,169 @@ dpkg-source: info: applying gcc-6.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/30518/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/30190/tmp/hooks/D01_modify_environment starting +debug: Running on virt32b. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/30190/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/30190/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=4' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='c799cdf88f3046059b59a11354343bc8' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='30518' - PS1='# ' - PS2='> ' + INVOCATION_ID=4f04d4393f8140cf86fe2d9ba2bcf8bb + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=30190 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.oowrJ1BrWt/pbuilderrc_a4is --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.oowrJ1BrWt/b1 --logfile b1/build.log proftmb_1.1.12-9.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:8000/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.oowrJ1BrWt/pbuilderrc_Xlfj --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.oowrJ1BrWt/b2 --logfile b2/build.log proftmb_1.1.12-9.dsc' + SUDO_GID=112 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:8000/ I: uname -a - Linux virt64b 5.10.0-8-arm64 #1 SMP Debian 5.10.46-4 (2021-08-03) aarch64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-4 (2021-08-03) armv7l GNU/Linux I: ls -l /bin total 3580 - -rwxr-xr-x 1 root root 816764 Aug 4 08:25 bash - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat - -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown - -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp - -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash - -rwxr-xr-x 1 root root 75880 Sep 22 2020 date - -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd - -rwxr-xr-x 1 root root 59912 Sep 22 2020 df - -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir - -rwxr-xr-x 1 root root 55012 Jul 28 07:09 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 22496 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 47492 Jul 28 07:09 findmnt - -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount - -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe - -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip - -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln - -rwxr-xr-x 1 root root 35068 Feb 7 2020 login - -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls - -rwxr-xr-x 1 root root 99940 Jul 28 07:09 lsblk - -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 34408 Jul 28 07:09 more - -rwsr-xr-x 1 root root 34400 Jul 28 07:09 mount - -rwxr-xr-x 1 root root 9824 Jul 28 07:09 mountpoint - -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash - -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm - -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 20 21:24 sh -> dash - -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty - -rwsr-xr-x 1 root root 46704 Jul 28 07:09 su - -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync - -rwxr-xr-x 1 root root 340872 Feb 16 2021 tar - -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch - -rwxr-xr-x 1 root root 22496 Sep 22 2020 true - -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server - -rwsr-xr-x 1 root root 22108 Jul 28 07:09 umount - -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress - -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 38512 Jul 28 07:09 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless - -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew -I: user script /srv/workspace/pbuilder/30518/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 816764 Aug 5 10:25 bash + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 9636 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 26668 Sep 23 2020 cat + -rwxr-xr-x 1 root root 43104 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 38984 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 43112 Sep 23 2020 chown + -rwxr-xr-x 1 root root 92616 Sep 23 2020 cp + -rwxr-xr-x 1 root root 75524 Dec 11 2020 dash + -rwxr-xr-x 1 root root 75880 Sep 23 2020 date + -rwxr-xr-x 1 root root 55436 Sep 23 2020 dd + -rwxr-xr-x 1 root root 59912 Sep 23 2020 df + -rwxr-xr-x 1 root root 96764 Sep 23 2020 dir + -rwxr-xr-x 1 root root 55012 Jul 29 09:09 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 22508 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 22496 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 47492 Jul 29 09:09 findmnt + -rwsr-xr-x 1 root root 26076 Feb 27 06:12 fusermount + -rwxr-xr-x 1 root root 124508 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe + -rwxr-xr-x 1 root root 64212 Mar 3 13:30 gzip + -rwxr-xr-x 1 root root 13784 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 43180 Sep 23 2020 ln + -rwxr-xr-x 1 root root 35068 Feb 8 2020 login + -rwxr-xr-x 1 root root 96764 Sep 23 2020 ls + -rwxr-xr-x 1 root root 99940 Jul 29 09:09 lsblk + -rwxr-xr-x 1 root root 51408 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 43184 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 30780 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 34408 Jul 29 09:09 more + -rwsr-xr-x 1 root root 34400 Jul 29 09:09 mount + -rwxr-xr-x 1 root root 9824 Jul 29 09:09 mountpoint + -rwxr-xr-x 1 root root 88524 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 26652 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Aug 5 10:25 rbash -> bash + -rwxr-xr-x 1 root root 30740 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 43104 Sep 23 2020 rm + -rwxr-xr-x 1 root root 30732 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 14144 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 76012 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Aug 24 11:19 sh -> bash + lrwxrwxrwx 1 root root 4 Aug 21 23:25 sh.distrib -> dash + -rwxr-xr-x 1 root root 22532 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 55360 Sep 23 2020 stty + -rwsr-xr-x 1 root root 46704 Jul 29 09:09 su + -rwxr-xr-x 1 root root 22532 Sep 23 2020 sync + -rwxr-xr-x 1 root root 340872 Feb 17 2021 tar + -rwxr-xr-x 1 root root 9808 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 67696 Sep 23 2020 touch + -rwxr-xr-x 1 root root 22496 Sep 23 2020 true + -rwxr-xr-x 1 root root 9636 Feb 27 06:12 ulockmgr_server + -rwsr-xr-x 1 root root 22108 Jul 29 09:09 umount + -rwxr-xr-x 1 root root 22520 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress + -rwxr-xr-x 1 root root 96764 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 38512 Jul 29 09:09 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless + -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew +I: user script /srv/workspace/pbuilder/30190/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -237,7 +271,7 @@ Get: 35 http://deb.debian.org/debian bullseye/main armhf libgsl25 armhf 2.6+dfsg-2 [769 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf libgsl-dev armhf 2.6+dfsg-2 [963 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf opt armhf 3.19-1.3+b1 [40.3 kB] -Fetched 19.7 MB in 3s (7822 kB/s) +Fetched 19.7 MB in 2s (10.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) @@ -401,7 +435,8 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/proftmb-1.1.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../proftmb_1.1.12-9_source.changes +hostname: Name or service not known +I: Running cd /build/proftmb-1.1.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../proftmb_1.1.12-9_source.changes dpkg-buildpackage: info: source package proftmb dpkg-buildpackage: info: source version 1.1.12-9 dpkg-buildpackage: info: source distribution unstable @@ -480,7 +515,7 @@ config.status: creating config.h config.status: executing depfiles commands dh_auto_build - make -j3 + make -j4 make[1]: Entering directory '/build/proftmb-1.1.12' make all-recursive make[2]: Entering directory '/build/proftmb-1.1.12' @@ -493,7 +528,8 @@ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o proftmb.o proftmb.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Backward.o Backward.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o BaumWelch.o BaumWelch.cpp -In file included from Backward.cpp:1: +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Eval.o Eval.cpp +In file included from BaumWelch.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -515,7 +551,7 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from BaumWelch.cpp:1: +In file included from Backward.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -531,6 +567,14 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ +In file included from TrainSeq.h:5, + from BaumWelch.cpp:2: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ @@ -542,18 +586,43 @@ Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ +In file included from proftmb.cpp:14: +Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 34 | static void LoadL2L(char*) throw (string&); + | ^~~~~ +Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 35 | static void LoadL2A(char*) throw (string&); + | ^~~~~ +Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | static void LoadA2E(char*) throw (string&); + | ^~~~~ +Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 37 | static void LoadConnect(char*) throw (string&); + | ^~~~~ +Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 40 | vector&) throw (string&); + | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ In file included from TrainSeq.h:5, - from BaumWelch.cpp:2: + from Eval.h:11, + from Eval.cpp:6: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from proftmb.cpp:14: +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); + | ^~~~~ +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ +In file included from TrainSeq.h:6, + from Eval.h:11, + from Eval.cpp:6: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -575,6 +644,10 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ +In file included from Eval.cpp:6: +Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); + | ^~~~~ In file included from TrainSeq.h:5, from proftmb.cpp:15: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] @@ -604,6 +677,9 @@ proftmb.cpp:273:78: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 273 | const char *datfile, double cut, Par& m, const char *name, bool multiQ) throw (string &) { | ^~~~~ +Eval.cpp:654:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 654 | float RelativeEntropy(vector& A, vector& B) throw (char *){ + | ^~~~~ In file included from /usr/include/c++/10/vector:72, from structs.h:5, from Par.h:4, @@ -612,15 +688,14 @@ /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Eval.o Eval.cpp /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpectA.o ExpectA.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpectC.o ExpectC.cpp In file included from TrainSeq.h:5, - from Eval.h:11, - from Eval.cpp:6: + from ExpectA.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ @@ -628,8 +703,7 @@ 194 | static map > > Read(char*) throw (string&); | ^~~~~ In file included from TrainSeq.h:6, - from Eval.h:11, - from Eval.cpp:6: + from ExpectA.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -651,15 +725,8 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from Eval.cpp:6: -Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); - | ^~~~~ -Eval.cpp:654:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 654 | float RelativeEntropy(vector& A, vector& B) throw (char *){ - | ^~~~~ In file included from TrainSeq.h:5, - from ExpectA.cpp:1: + from ExpectC.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ @@ -667,7 +734,7 @@ 194 | static map > > Read(char*) throw (string&); | ^~~~~ In file included from TrainSeq.h:6, - from ExpectA.cpp:1: + from ExpectC.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -689,18 +756,26 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ExpectC.o ExpectC.cpp -In file included from TrainSeq.h:5, - from ExpectC.cpp:1: +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Forward.o Forward.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o GradientDescent.o GradientDescent.cpp +In file included from /usr/include/c++/10/vector:72, + from structs.h:5, + from Eval.h:4, + from Eval.cpp:6: +/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + 426 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 +In file included from Forward.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Forward.o Forward.cpp -In file included from TrainSeq.h:6, - from ExpectC.cpp:1: +In file included from Forward.cpp:2: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -722,17 +797,6 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o GradientDescent.o GradientDescent.cpp -In file included from /usr/include/c++/10/vector:72, - from structs.h:5, - from Eval.h:4, - from Eval.cpp:6: -/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 426 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from structs.h:5, from Eval.h:4, @@ -762,35 +826,6 @@ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from Forward.cpp:1: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -In file included from Forward.cpp:2: -Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 34 | static void LoadL2L(char*) throw (string&); - | ^~~~~ -Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 35 | static void LoadL2A(char*) throw (string&); - | ^~~~~ -Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | static void LoadA2E(char*) throw (string&); - | ^~~~~ -Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 37 | static void LoadConnect(char*) throw (string&); - | ^~~~~ -Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 40 | vector&) throw (string&); - | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); - | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ In file included from GradientDescent.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); @@ -883,6 +918,7 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o HTools.o HTools.cpp In file included from HMMOutput.h:4, from HMMOutput.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] @@ -925,7 +961,7 @@ Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); | ^~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o HTools.o HTools.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Krogh1Best.o Krogh1Best.cpp In file included from HTools.h:4, from HTools.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] @@ -957,7 +993,6 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Krogh1Best.o Krogh1Best.cpp In file included from Krogh1Best.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); @@ -1023,6 +1058,7 @@ 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Par.o Par.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Params.o Params.cpp In file included from Par.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); @@ -1054,6 +1090,28 @@ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ +In file included from Params.cpp:1: +Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 34 | static void LoadL2L(char*) throw (string&); + | ^~~~~ +Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 35 | static void LoadL2A(char*) throw (string&); + | ^~~~~ +Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | static void LoadA2E(char*) throw (string&); + | ^~~~~ +Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 37 | static void LoadConnect(char*) throw (string&); + | ^~~~~ +Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 40 | vector&) throw (string&); + | ^~~~~ +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); + | ^~~~~ +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ In file included from /usr/include/c++/10/vector:72, from structs.h:5, from TrainSeq.h:4, @@ -1063,18 +1121,12 @@ /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ -/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Seq}; _Tp = Seq; _Alloc = std::allocator]': -/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 Par.cpp:263:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 263 | void Par::LoadConnect(char* cf) throw (string&){ | ^~~~~ Par.cpp:348:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 348 | void Par::LoadL2L(char* l2lfile) throw (string&){ | ^~~~~ -/usr/include/c++/10/bits/vector.tcc: In function 'std::vector LoadTestSeqs(char*)': -/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Par.cpp:415:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 415 | void Par::LoadL2A(char* l2afile) throw (string&){ | ^~~~~ @@ -1090,34 +1142,18 @@ Par.cpp:763:37: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 763 | void Par::ReadNullFreq(char *ifile) throw (string&){ | ^~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Params.o Params.cpp +/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Seq}; _Tp = Seq; _Alloc = std::allocator]': +/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 +/usr/include/c++/10/bits/vector.tcc: In function 'std::vector LoadTestSeqs(char*)': +/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In function 'std::vector LoadTrainSeqs(char*, char*)': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from Params.cpp:1: -Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 34 | static void LoadL2L(char*) throw (string&); - | ^~~~~ -Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 35 | static void LoadL2A(char*) throw (string&); - | ^~~~~ -Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | static void LoadA2E(char*) throw (string&); - | ^~~~~ -Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 37 | static void LoadConnect(char*) throw (string&); - | ^~~~~ -Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 40 | vector&) throw (string&); - | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); - | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Posterior.o Posterior.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Regularization.o Regularization.cpp In file included from Posterior.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); @@ -1155,14 +1191,6 @@ /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Regularization.o Regularization.cpp -/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': -/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -/usr/include/c++/10/bits/vector.tcc: In static member function 'static void Par::ReadZCurve(char*)': -/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 - 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from Regularization.cpp:7: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); @@ -1185,17 +1213,15 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from /usr/include/c++/10/vector:67, - from structs.h:5, - from Par.h:4, - from Par.cpp:1: -/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void Par::InitDirichlet(char*)': -/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1198 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1198 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Seq.o Seq.cpp +/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': +/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 +/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 +/usr/include/c++/10/bits/vector.tcc: In static member function 'static void Par::ReadZCurve(char*)': +/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 + 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Sov.o Sov.cpp In file included from /usr/include/c++/10/vector:72, from structs.h:5, from Par.h:4, @@ -1204,17 +1230,7 @@ /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Seq.o Seq.cpp -/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void Par::InitZCalibration(char*)': -/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1198 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1198 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1198 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o structs.o structs.cpp In file included from /usr/include/c++/10/vector:67, from structs.h:5, from Par.h:4, @@ -1231,6 +1247,21 @@ /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ +/usr/include/c++/10/bits/vector.tcc: In function 'void Read2DVector(std::ifstream&, std::vector >&, T, M1, M2) [with T = archpair; M1 = unsigned int; M2 = double]': +/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/10/vector:67, + from structs.h:5, + from Par.h:4, + from Par.cpp:1: +/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void Par::InitDirichlet(char*)': +/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1198 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1198 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from Seq.cpp:2: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); @@ -1260,16 +1291,44 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -/usr/include/c++/10/bits/vector.tcc: In function 'void Read2DVector(std::ifstream&, std::vector >&, T, M1, M2) [with T = archpair; M1 = unsigned int; M2 = double]': -/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from structs.cpp:2: +Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 34 | static void LoadL2L(char*) throw (string&); + | ^~~~~ +Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 35 | static void LoadL2A(char*) throw (string&); + | ^~~~~ +Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | static void LoadA2E(char*) throw (string&); + | ^~~~~ +Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 37 | static void LoadConnect(char*) throw (string&); + | ^~~~~ +Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 40 | vector&) throw (string&); + | ^~~~~ +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); + | ^~~~~ +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ Seq.cpp:99:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 99 | bool Seq::InitLabels(SS& sdat) throw (string&){ | ^~~~~ Seq.cpp:313:39: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 313 | map Seq::Read(char* file) throw (string&){ | ^~~~~ +/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void Par::InitZCalibration(char*)': +/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1198 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1198 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1198 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from structs.h:5, from Par.h:4, @@ -1291,33 +1350,7 @@ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Sov.o Sov.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o structs.o structs.cpp -In file included from structs.cpp:2: -Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 34 | static void LoadL2L(char*) throw (string&); - | ^~~~~ -Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 35 | static void LoadL2A(char*) throw (string&); - | ^~~~~ -Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | static void LoadA2E(char*) throw (string&); - | ^~~~~ -Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 37 | static void LoadConnect(char*) throw (string&); - | ^~~~~ -Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 40 | vector&) throw (string&); - | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); - | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tally.o Tally.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tools.o Tools.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o TrainSeq.o TrainSeq.cpp In file included from TrainSeq.h:5, from Tally.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] @@ -1349,6 +1382,30 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ +In file included from /usr/include/c++/10/vector:72, + from structs.h:5, + from TrainSeq.h:4, + from Tally.cpp:1: +/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {archpair}; _Tp = archpair; _Alloc = std::allocator]': +/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + 426 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +/usr/include/c++/10/bits/vector.tcc: In member function 'void Par::InitArch(double)': +/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tools.o Tools.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o TrainSeq.o TrainSeq.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Viterbi.o Viterbi.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Zscore.o Zscore.cpp +In file included from Zscore.cpp:24: +Zscore.h:9:49: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 9 | Z_Calibrate(set >&,int,double) throw (string&); + | ^~~~~ +Zscore.cpp:36:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | int windowsize,double zmax) throw (string&){ + | ^~~~~ +sed -e 's|__pkgdatadir__|/usr/share/proftmb|g;s|__datadir__|/usr/share|g;s|__PACKAGE__|proftmb|g;' < proftmb_example.txt.raw > proftmb_example.txt In file included from TrainSeq.h:5, from TrainSeq.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] @@ -1380,27 +1437,6 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Viterbi.o Viterbi.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Zscore.o Zscore.cpp -In file included from /usr/include/c++/10/vector:72, - from structs.h:5, - from TrainSeq.h:4, - from Tally.cpp:1: -/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {archpair}; _Tp = archpair; _Alloc = std::allocator]': -/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 426 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -/usr/include/c++/10/bits/vector.tcc: In member function 'void Par::InitArch(double)': -/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from Zscore.cpp:24: -Zscore.h:9:49: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 9 | Z_Calibrate(set >&,int,double) throw (string&); - | ^~~~~ -Zscore.cpp:36:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | int windowsize,double zmax) throw (string&){ - | ^~~~~ In file included from Viterbi.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); @@ -1430,7 +1466,6 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -sed -e 's|__pkgdatadir__|/usr/share/proftmb|g;s|__datadir__|/usr/share|g;s|__PACKAGE__|proftmb|g;' < proftmb_example.txt.raw > proftmb_example.txt In file included from /usr/include/c++/10/vector:72, from Zscore.h:1, from Zscore.cpp:24: @@ -1471,7 +1506,7 @@ make[2]: Leaving directory '/build/proftmb-1.1.12' make[1]: Leaving directory '/build/proftmb-1.1.12' dh_auto_test - make -j3 check VERBOSE=1 + make -j4 check VERBOSE=1 make[1]: Entering directory '/build/proftmb-1.1.12' Making check in examples make[2]: Entering directory '/build/proftmb-1.1.12/examples' @@ -1487,7 +1522,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - make -j3 install DESTDIR=/build/proftmb-1.1.12/debian/proftmb AM_UPDATE_INFO_DIR=no + make -j4 install DESTDIR=/build/proftmb-1.1.12/debian/proftmb AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/proftmb-1.1.12' Making install in examples make[2]: Entering directory '/build/proftmb-1.1.12/examples' @@ -1512,8 +1547,8 @@ mkdir -p "/build/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" /bin/mkdir -p '/build/proftmb-1.1.12/debian/proftmb/usr/share/doc/proftmb' cp "."/input/* "/build/proftmb-1.1.12/debian/proftmb/usr/share/proftmb/" - /usr/bin/install -c -m 644 README '/build/proftmb-1.1.12/debian/proftmb/usr/share/doc/proftmb' rm -rf `find "/build/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" -name .svn` + /usr/bin/install -c -m 644 README '/build/proftmb-1.1.12/debian/proftmb/usr/share/doc/proftmb' find "/build/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" -type d -exec chmod 0755 {} \; find "/build/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" -type f -exec chmod 0644 {} \; make install-data-hook @@ -1544,8 +1579,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'proftmb' in '../proftmb_1.1.12-9_armhf.deb'. dpkg-deb: building package 'proftmb-dbgsym' in '../proftmb-dbgsym_1.1.12-9_armhf.deb'. +dpkg-deb: building package 'proftmb' in '../proftmb_1.1.12-9_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../proftmb_1.1.12-9_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1553,12 +1588,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/30190/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/30190/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/30518 and its subdirectories -I: Current time: Mon Aug 23 09:19:18 -12 2021 -I: pbuilder-time-stamp: 1629753558 +I: removing directory /srv/workspace/pbuilder/30190 and its subdirectories +I: Current time: Tue Aug 24 11:21:45 +14 2021 +I: pbuilder-time-stamp: 1629753705