Diff of the two buildlogs: -- --- b1/build.log 2021-07-09 00:13:46.780651931 +0000 +++ b2/build.log 2021-07-09 00:17:51.931395332 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jul 8 12:10:32 -12 2021 -I: pbuilder-time-stamp: 1625789432 +I: Current time: Thu Aug 11 20:36:49 +14 2022 +I: pbuilder-time-stamp: 1660199809 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./libminc_2.4.03-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.ucAB8nWo/trustedkeys.kbx': General error -gpgv: Signature made Tue Nov 17 21:56:41 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.TsHAS2Xe/trustedkeys.kbx': General error +gpgv: Signature made Wed Nov 18 23:56:41 2020 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -34,135 +34,169 @@ dpkg-source: info: applying disable-dimension-test.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2697/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/10186/tmp/hooks/D01_modify_environment starting +debug: Running on codethink11-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/10186/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/10186/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' - DISTRIBUTION='' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2697' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=10186 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/pbuilderrc_wKMz --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/b1 --logfile b1/build.log libminc_2.4.03-3.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/pbuilderrc_yqMf --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.yHtiFtpmQB/b2 --logfile b2/build.log --extrapackages usrmerge libminc_2.4.03-3.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink16-arm64 4.15.0-147-generic #151-Ubuntu SMP Fri Jun 18 19:18:37 UTC 2021 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-147-generic #151-Ubuntu SMP Fri Jun 18 19:18:37 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 - -rwxr-xr-x 1 root root 1282512 Jun 21 14:26 bash - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat - -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown - -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp - -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash - -rwxr-xr-x 1 root root 101384 Sep 22 2020 date - -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd - -rwxr-xr-x 1 root root 89824 Sep 22 2020 df - -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir - -rwxr-xr-x 1 root root 76152 Feb 7 02:38 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 31512 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 64856 Feb 7 02:38 findmnt - -rwsr-xr-x 1 root root 34824 Feb 26 04:12 fusermount - -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe - -rwxr-xr-x 1 root root 93744 Mar 2 11:30 gzip - -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln - -rwxr-xr-x 1 root root 52720 Feb 7 2020 login - -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls - -rwxr-xr-x 1 root root 161960 Feb 7 02:38 lsblk - -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 51368 Feb 7 02:38 more - -rwsr-xr-x 1 root root 51360 Feb 7 02:38 mount - -rwxr-xr-x 1 root root 14496 Feb 7 02:38 mountpoint - -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash - -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm - -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jul 7 21:24 sh -> dash - -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty - -rwsr-xr-x 1 root root 67776 Feb 7 02:38 su - -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync - -rwxr-xr-x 1 root root 535768 Feb 16 21:55 tar - -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch - -rwxr-xr-x 1 root root 31512 Sep 22 2020 true - -rwxr-xr-x 1 root root 14264 Feb 26 04:12 ulockmgr_server - -rwsr-xr-x 1 root root 30880 Feb 7 02:38 umount - -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress - -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 59584 Feb 7 02:38 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless - -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew -I: user script /srv/workspace/pbuilder/2697/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1282512 Jun 22 2021 bash + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 14264 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 39832 Sep 23 2020 cat + -rwxr-xr-x 1 root root 64512 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 60368 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 64528 Sep 23 2020 chown + -rwxr-xr-x 1 root root 138896 Sep 23 2020 cp + -rwxr-xr-x 1 root root 129544 Dec 11 2020 dash + -rwxr-xr-x 1 root root 101384 Sep 23 2020 date + -rwxr-xr-x 1 root root 80984 Sep 23 2020 dd + -rwxr-xr-x 1 root root 89824 Sep 23 2020 df + -rwxr-xr-x 1 root root 143088 Sep 23 2020 dir + -rwxr-xr-x 1 root root 76152 Feb 8 2021 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 35632 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 31512 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 64856 Feb 8 2021 findmnt + -rwsr-xr-x 1 root root 34824 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 178400 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe + -rwxr-xr-x 1 root root 93744 Mar 3 2021 gzip + -rwxr-xr-x 1 root root 18440 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 68720 Sep 23 2020 ln + -rwxr-xr-x 1 root root 52720 Feb 8 2020 login + -rwxr-xr-x 1 root root 143088 Sep 23 2020 ls + -rwxr-xr-x 1 root root 161960 Feb 8 2021 lsblk + -rwxr-xr-x 1 root root 85200 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 68744 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 43976 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 51368 Feb 8 2021 more + -rwsr-xr-x 1 root root 51360 Feb 8 2021 mount + -rwxr-xr-x 1 root root 14496 Feb 8 2021 mountpoint + -rwxr-xr-x 1 root root 134808 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 35720 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Jun 22 2021 rbash -> bash + -rwxr-xr-x 1 root root 43872 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 68592 Sep 23 2020 rm + -rwxr-xr-x 1 root root 43880 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 19208 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Aug 11 20:36 sh -> bash + lrwxrwxrwx 1 root root 4 Aug 11 05:47 sh.distrib -> dash + -rwxr-xr-x 1 root root 35656 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 72640 Sep 23 2020 stty + -rwsr-xr-x 1 root root 67776 Feb 8 2021 su + -rwxr-xr-x 1 root root 35672 Sep 23 2020 sync + -rwxr-xr-x 1 root root 535768 Feb 17 2021 tar + -rwxr-xr-x 1 root root 10568 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 89120 Sep 23 2020 touch + -rwxr-xr-x 1 root root 31512 Sep 23 2020 true + -rwxr-xr-x 1 root root 14264 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 30880 Feb 8 2021 umount + -rwxr-xr-x 1 root root 35640 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress + -rwxr-xr-x 1 root root 143088 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 59584 Feb 8 2021 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless + -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew +I: user script /srv/workspace/pbuilder/10186/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -290,7 +324,7 @@ Get: 78 http://deb.debian.org/debian bullseye/main arm64 libznz-dev arm64 3.0.1-8 [14.2 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libnifti2-dev arm64 3.0.1-8 [96.8 kB] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libnifti-dev all 3.0.1-8 [12.7 kB] -Fetched 32.8 MB in 1s (31.5 MB/s) +Fetched 32.8 MB in 1s (54.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) @@ -626,8 +660,45 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 157 kB of additional disk space will be used. +Get:1 http://deb.debian.org/debian bullseye/main arm64 libnumber-compare-perl all 0.03-1.1 [6956 B] +Get:2 http://deb.debian.org/debian bullseye/main arm64 libtext-glob-perl all 0.11-1 [8888 B] +Get:3 http://deb.debian.org/debian bullseye/main arm64 libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://deb.debian.org/debian bullseye/main arm64 usrmerge all 25 [13.0 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (2861 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25114 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1.1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... +Unpacking libtext-glob-perl (0.11-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_25_all.deb ... +Unpacking usrmerge (25) ... +Setting up libtext-glob-perl (0.11-1) ... +Setting up libnumber-compare-perl (0.03-1.1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (25) ... +The system has been successfully converted. +Processing triggers for man-db (2.9.4-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libminc_2.4.03-3_source.changes +hostname: Temporary failure in name resolution +I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libminc_2.4.03-3_source.changes dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.03-3 dpkg-buildpackage: info: source distribution unstable @@ -774,8 +845,8 @@ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2_static.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2_static.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/CMakeFiles/minc2_static.dir/depend.internal". Scanning dependencies of target minc2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' @@ -784,188 +855,23 @@ make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 0%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o [ 1%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o +[ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o -[ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c -[ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o -[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c -[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c -[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 528 | buffer = malloc(n * sizeof(double)); - | ^ -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 554 | buffer = malloc(n * sizeof(double)); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': -/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 417 | number_of_dims = volume->number_of_dims; - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 422 | max_dims = array_length; - | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': -/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': -/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1036 | offsets[j] = dimension->start + ( i * dimension->step ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': -/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -[ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 528 | buffer = malloc(n * sizeof(double)); - | ^ -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 554 | buffer = malloc(n * sizeof(double)); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': -/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 417 | number_of_dims = volume->number_of_dims; - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 422 | max_dims = array_length; - | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': -/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': -/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1036 | offsets[j] = dimension->start + ( i * dimension->step ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': -/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': -/build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': -/build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': -/build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 124 | data->frame_ptr->grp_idx ); - | ~~~~~~~~~~~~~~~^~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 157 | data->frame_ptr->grp_idx - 1, - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': -/build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); - | ~~~~^~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': -/build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': -/build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': -/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 906 | slength = strlen ( path ) - ( pch - path ); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 910 | std_name[i] = path[pch - path + 1 + i]; - | ^ -[ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c +[ 3%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o +[ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c +[ 3%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", @@ -1021,70 +927,93 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ -[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': -/build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), - | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), - | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': -/build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 433 | ndims = volume->number_of_dims; - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 496 | slice_ndims = ndims; - | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 507 | for (i = slice_ndims; i < ndims; i++ ) { - | ^~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c -/build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 677 | imap[volume->dim_indices[i]] = i; - | ^ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': +/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 417 | number_of_dims = volume->number_of_dims; + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 422 | max_dims = array_length; + | ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': +/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': +/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1036 | offsets[j] = dimension->start + ( i * dimension->step ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + | ^~ +/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + | ^~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 528 | buffer = malloc(n * sizeof(double)); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': +/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 554 | buffer = malloc(n * sizeof(double)); + | ^ +[ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o +/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 40 | return (tmp); + | ^ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c +/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); + | ^~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 528 | buffer = malloc(n * sizeof(double)); + | ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 554 | buffer = malloc(n * sizeof(double)); + | ^ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': -/build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 922 | ndims = volume->number_of_dims; - | ^~~~~~ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/hyper.c:16: -/build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); - | ^~~~~ -/build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' - 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} - | ^~~ -/build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); - | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 980 | slice_ndims = ndims; - | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': /build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 433 | ndims = volume->number_of_dims; | ^~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 991 | for (i = slice_ndims; i < ndims; i++ ) { - | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ @@ -1097,9 +1026,6 @@ /build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 507 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 1119 | imap[volume->dim_indices[i]] = i; - | ^ /build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 677 | imap[volume->dim_indices[i]] = i; | ^ @@ -1128,85 +1054,11 @@ /build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 991 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ -[ 6%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o /build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c -/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 40 | return (tmp); - | ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); - | ^~~ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 40 | return (tmp); - | ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); - | ^~~ -[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c -[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o +[ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': -/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1491 | x1 = x; - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': -/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': -/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1719 | osize[i] = isize[i] / scale; - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1785 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1800 | start[0] = slice * scale; - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1803 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': -/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': -/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); - | ^ -[ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c -[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c /build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': /build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); @@ -1215,12 +1067,8 @@ /build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ -[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c -/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': -/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c /build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': /build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; @@ -1271,45 +1119,18 @@ /build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 57 | *name = H5Tget_member_name(volume->ftype_id, index); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 91 | offset = index * H5Tget_size(ftype_id); - | ^ -[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c -[ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o -[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o +[ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c -[ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o +[ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c /build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': /build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': -/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); - | ^ -/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 139 | handle->edge_lengths[i] = dims[i]; - | ^~~~ -/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, - | ^ -/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 156 | handle->zlib_level = cd_values[0]; - | ^~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': -/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); - | ^ +[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); @@ -1327,12 +1148,10 @@ /build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ -[ 11%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c -[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c -[ 12%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o +[ 7%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c +[ 8%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); @@ -1347,21 +1166,10 @@ /build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': -/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 634 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 132 | fd = H5Fopen(path, mode, prp_id); - | ^~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': -/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: @@ -1371,9 +1179,6 @@ /build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ -/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); - | ^~~~~ /build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ @@ -1433,108 +1238,19 @@ /build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ -/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': -/build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 634 | hdf_size[i] = create_props->edge_lengths[i]; - | ^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") - | ~~~~~~~~~~~~^~~~~~~~~~~~ -/build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' - 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} - | ^~~ -/build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * - | ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); - | ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); - | ^ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': -/build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1171 | hdim->offsets = malloc(n_points * sizeof(double)); - | ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:1173:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1173 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); - | ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1195 | hdim->widths = malloc(n_points * sizeof(double)); - | ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:1197:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1197 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); - | ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': -/build/libminc-2.4.03/libsrc2/volume.c:1421:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * - | ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:1426:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); - | ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); - | ^ -/build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); - | ^ -/build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); - | ^ -[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c -[ 13%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c -[ 13%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c -[ 13%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o +[ 8%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +[ 9%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o /build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ -/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': -/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 84 | strncpy(buffer, tmp, maxlen); - | ^~~~~~ -[ 14%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c -[ 14%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c -[ 15%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c -[ 16%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c +[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': /build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; @@ -1546,18 +1262,20 @@ /build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 439 | numSpaces = width + 1 - strlen(infoPtr->key); + | ^~~~~ +[ 9%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c +[ 10%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c /build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 439 | numSpaces = width + 1 - strlen(infoPtr->key); - | ^~~~~ /build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ -[ 16%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c /build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] 134 | offset_next = -1; /* Initialize. */ @@ -1574,54 +1292,179 @@ /build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' 204 | BIT_SET(bitmap, offset_next); | ^~~~~~~ -[ 16%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': +/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 417 | number_of_dims = volume->number_of_dims; + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 422 | max_dims = array_length; + | ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': +/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': +/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1036 | offsets[j] = dimension->start + ( i * dimension->step ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + | ^~ +/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + | ^~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': +/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +[ 10%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +[ 10%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c -In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: -/build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] - 14 | #define MI_ROOT_PATH "/minc-2.0" - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' - 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); - | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here - 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", - | ^~ -In file included from /usr/include/stdio.h:867, - from /usr/include/hdf5/serial/H5Epublic.h:20, - from /usr/include/hdf5/serial/hdf5.h:26, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 - 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 37 | __bos (__s), __fmt, __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 17%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o +[ 11%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -[ 18%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -[ 18%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -[ 18%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': +/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 399 | icvp->user_do_range = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 408 | icvp->user_do_norm = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 411 | icvp->user_user_norm = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 420 | icvp->user_do_fillvalue = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 426 | icvp->user_do_dimconv = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 429 | icvp->user_do_scalar = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 432 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 437 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 442 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 447 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 455 | icvp->user_dim_size[0] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 458 | icvp->user_dim_size[1] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 461 | icvp->user_keep_aspect = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 475 | icvp->user_dim_size[idim] = value; + | ^~~~~ +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqdbl': +/build/libminc-2.4.03/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 703 | *value = icvp->user_dim_size[0]; break; + | ^~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 705 | *value = icvp->user_dim_size[1]; break; + | ^~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 728 | *value = icvp->user_dim_size[idim]; + | ^~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': +/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 774 | *value = dvalue; + | ^~~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': +/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 803 | *value = dvalue; + | ^~~~~~ +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/image_conversion.c:173: +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c -In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: -/build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] - 14 | #define MI_ROOT_PATH "/minc-2.0" - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' - 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); - | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here - 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", - | ^~ -In file included from /usr/include/stdio.h:867, - from /usr/include/hdf5/serial/H5Epublic.h:20, - from /usr/include/hdf5/serial/hdf5.h:26, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 - 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 37 | __bos (__s), __fmt, __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + 166 | *((signed char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + 180 | *((signed short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + 194 | *((signed int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + | ^~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': /build/libminc-2.4.03/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; @@ -1771,29 +1614,8 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ -[ 19%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c -/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': -/build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; - | ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 244 | ParseLong(argv[srcIndex], &endPtr); - | ^~~~~~~~~ -/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': -/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 53 | files = malloc(sizeof(*files) * array_size); - | ^ -/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 76 | files = realloc(files, sizeof(*files) * array_size); - | ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 439 | numSpaces = width + 1 - strlen(infoPtr->key); - | ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 439 | numSpaces = width + 1 - strlen(infoPtr->key); - | ^~~~~ +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; @@ -1835,155 +1657,27 @@ /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': -/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 399 | icvp->user_do_range = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 408 | icvp->user_do_norm = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 411 | icvp->user_user_norm = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 420 | icvp->user_do_fillvalue = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 426 | icvp->user_do_dimconv = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 429 | icvp->user_do_scalar = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 432 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 437 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 442 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 447 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 455 | icvp->user_dim_size[0] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 458 | icvp->user_dim_size[1] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 461 | icvp->user_keep_aspect = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 475 | icvp->user_dim_size[idim] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqdbl': -/build/libminc-2.4.03/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 703 | *value = icvp->user_dim_size[0]; break; - | ^~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 705 | *value = icvp->user_dim_size[1]; break; - | ^~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 728 | *value = icvp->user_dim_size[idim]; - | ^~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': -/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 774 | *value = dvalue; - | ^~~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': -/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 803 | *value = dvalue; - | ^~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/image_conversion.c:173: -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - 166 | *((signed char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - 180 | *((signed short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - 194 | *((signed int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - | ^~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -[ 19%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c -[ 19%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c -/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': -/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] - 134 | offset_next = -1; /* Initialize. */ - | ^ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - | ^ -/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' - 150 | BIT_SET(bitmap, offset_start); - | ^~~~~~~ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - | ^ -/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' - 204 | BIT_SET(bitmap, offset_next); - | ^~~~~~~ -[ 20%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: +/build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] + 14 | #define MI_ROOT_PATH "/minc-2.0" + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' + 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); + | ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here + 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", + | ^~ +In file included from /usr/include/stdio.h:867, + from /usr/include/hdf5/serial/H5Epublic.h:20, + from /usr/include/hdf5/serial/hdf5.h:26, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 + 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 37 | __bos (__s), __fmt, __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': @@ -1997,14 +1691,67 @@ /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ -[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c -[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -[ 22%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o +[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': +/build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': +/build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': +/build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 124 | data->frame_ptr->grp_idx ); + | ~~~~~~~~~~~~~~~^~~~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 157 | data->frame_ptr->grp_idx - 1, + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': +/build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); + | ~~~~^~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': +/build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': +/build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': +/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 906 | slength = strlen ( path ) - ( pch - path ); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 910 | std_name[i] = path[pch - path + 1 + i]; + | ^ +[ 14%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c -[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +[ 14%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); @@ -2074,6 +1821,897 @@ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ +[ 15%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c +[ 15%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'get_loop_dim_size': +/build/libminc-2.4.03/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 467 | return dim_length; + | ^~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_variables': +/build/libminc-2.4.03/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 970 | input_vector_length = get_vector_length(inmincid, loop_options); + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1182 | att_length += strlen(arg_string) + 1; + | ^~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); + | ^ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1182 | att_length += strlen(arg_string) + 1; + | ^~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, + from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: +/build/libminc-2.4.03/libsrc/hdf_convenience.c:209:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); + | ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'do_voxel_loop': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1347 | num_output_files, block_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 370 | int typ_size = H5Tget_size(typ_id); + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:371:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] + 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attname': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:455:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 455 | att_id = H5Aopen_idx(loc_id, attnum); + | ^~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:458:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] + 458 | status = H5Aget_name(att_id, MAX_NC_NAME, name); + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attinq': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:578:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 578 | *length_ptr = typ_size; + | ^~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:581:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] + 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:667:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 667 | length = H5Tget_size(typ_id); + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_dimdef': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:958:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 958 | hdf_set_length(var->dset_id, dimnm, length); + | ^~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1714 | num_output_files, block_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_looping': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1800 | input_vector_length = get_vector_length(inmincid, loop_options); + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attput': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1147:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1147 | H5Tset_size(ftyp_id, val_len); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1185:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1185 | hsize_t temp_size = val_len; + | ^~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vardef': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1322:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1322 | dims[i] = length; + | ^~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1369:60: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { + | ^ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); + | ^ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN' + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); + | ^ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN' + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1381:38: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1381 | chkdims[i] = chunk_length; + | ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1386:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1386 | H5Pset_deflate(prp_id, comp_level); + | ^~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1418:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 1418 | hdf_set_length(dst_id, varnm, dim->length); + | ~~~^~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varget': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1534:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1534 | fstart[i] = start_ptr[i]; + | ^~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1535:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1535 | count[i] = length_ptr[i]; + | ^~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varputg': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1633:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); + | ~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1649:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1649 | mystart[idim] = start != NULL ? start[idim] : 0; + | ^~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1658:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1658 | myedges[idim] = edges[idim]; + | ^~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1682:29: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] + 1682 | length[idim] = mymap[idim] * myedges[idim]; + | ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1683:45: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] + 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; + | ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1740:16: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] + 1740 | mystart[idim] += mystride[idim]; + | ^~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1742:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1742 | mystart[idim] = start[idim]; + | ^~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vargetg': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1810:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); + | ~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:39: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; + | ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:22: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] + 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; + | ^~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varput': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1957:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1957 | fstart[i] = start_ptr[i]; + | ^~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1958:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 1958 | count[i] = length_ptr[i]; + | ^~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varsize': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2069:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] + 2069 | size_ptr[i] = dims[i]; + | ^~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_open': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2239:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2239 | file_id = H5Fopen(path, mode, fpid); + | ^~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2249:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; + | ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2271:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 2271 | dims[ndims++] = H5Tget_nmembers(type_id); + | ^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_create': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2331:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); + | ^~~~~ +/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': +/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +[ 16%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': +/build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 258 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), + | ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 296 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), + | ^~~~~ +[ 16%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': +/build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 433 | ndims = volume->number_of_dims; + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 445 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 453 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 496 | slice_ndims = ndims; + | ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 507 | for (i = slice_ndims; i < ndims; i++ ) { + | ^~~~~~~~~~~ +[ 16%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o +/build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 677 | imap[volume->dim_indices[i]] = i; + | ^ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': +/build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 922 | ndims = volume->number_of_dims; + | ^~~~~~ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/hyper.c:16: +/build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 933 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); + | ^~~~~ +/build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' + 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} + | ^~~ +/build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 940 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 980 | slice_ndims = ndims; + | ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 991 | for (i = slice_ndims; i < ndims; i++ ) { + | ^~~~~~~~~~~ +[ 17%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o +/build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 1119 | imap[volume->dim_indices[i]] = i; + | ^ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c +[ 17%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c +/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 40 | return (tmp); + | ^ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); + | ^~~ +[ 18%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c +/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': +/build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 393 | ucount[j++] = dim_len[i]; + | ^~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + | ^~~~~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc.h:172, + from /build/libminc-2.4.03/libsrc/minc_private.h:83, + from /build/libminc-2.4.03/libsrc/minc_simple.c:38: +/build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 67 | #define nctypelen MI2typelen +/build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' + 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + | ^~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * + | ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * + | ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 446 | p_var->var_atts = malloc(p_var->var_natts * + | ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_transform_to_world': +/build/libminc-2.4.03/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 1026 | input[0] = voxel[spatial_axes[0]]; + | ^~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 1027 | input[1] = voxel[spatial_axes[1]]; + | ^~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 1028 | input[2] = voxel[spatial_axes[2]]; + | ^~~~~ +[ 18%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c +[ 19%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c +[ 19%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c +[ 19%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c +[ 19%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': +/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1491 | x1 = x; + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': +/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': +/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1719 | osize[i] = isize[i] / scale; + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1785 | count[0] = scale; + | ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1800 | start[0] = slice * scale; + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1803 | count[0] = scale; + | ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': +/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': +/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); + | ^ +[ 20%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c +[ 20%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c +[ 21%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c +[ 21%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c +[ 22%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c +/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': +/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 184 | volume_filename = alloc_string( string_length(prefix_filename) + + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ + 185 | 100 ); + | ~~~ +[ 22%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c +[ 23%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: +/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' + 532 | start[d] = VIO_FLOOR( pos ); + | ^~~~~~~~~ +[ 23%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c +[ 23%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c +[ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c +[ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c +[ 25%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c +[ 25%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +[ 26%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c +[ 26%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 222 | progress->n_dots_so_far = n_dots; + | ^~~~~~ +[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 40 | str = alloc_string( string_length(initial) ); + | ^~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c +[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1249 | directory = alloc_string( slash_index ); + | ^~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 2445 | *str = alloc_string( length ); + | ^~~~~~ +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' + 238 | i = VIO_FLOOR( x ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' + 239 | j = VIO_FLOOR( y ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' + 240 | k = VIO_FLOOR( z ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] + 257 | coefs[c] = outside_value; + | ^~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] + 305 | out_rgb[i] = c0 + w * dw; + | ^~ +[ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' + 404 | i = VIO_FLOOR( x ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' + 405 | j = VIO_FLOOR( y ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' + 406 | k = VIO_FLOOR( z ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' + 407 | l = VIO_FLOOR( t ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' + 408 | m = VIO_FLOOR( v ); + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' + 1010 | start[d] = VIO_FLOOR( pos ); + | ^~~~~~~~~ +[ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c +/build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': +/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] + 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); + | ^ +/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] + 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); + | ^ +[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c +[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 613 | slab_size *= file->sizes_in_file[d]; + | ^~~~ +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:21: +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' + 616 | slab_size *= MIN( file->sizes_in_file[d], + | ^~~ +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: +/build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' + 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' + 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); + | ^~~~~~~~~ +[ 30%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c +[ 31%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c +/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 57 | *name = H5Tget_member_name(volume->ftype_id, index); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 91 | offset = index * H5Tget_size(ftype_id); + | ^ +[ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c +/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 31%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c +[ 32%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 779 | new_history = alloc_string( old_att_length ); + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1473 | slab_size *= count[d]; + | ^~~~~ +[ 32%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c +[ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': +/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); + | ^ +/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 139 | handle->edge_lengths[i] = dims[i]; + | ^~~~ +/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, + | ^ +/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 156 | handle->zlib_level = cd_values[0]; + | ^~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': +/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); + | ^ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': +/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 132 | fd = H5Fopen(path, mode, prp_id); + | ^~~~ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': +/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 224 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 227 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': +/build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 634 | hdf_size[i] = create_props->edge_lengths[i]; + | ^~~~~~~~~~~~ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 664 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") + | ~~~~~~~~~~~~^~~~~~~~~~~~ +/build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' + 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} + | ^~~ +/build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 896 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * + | ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 900 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); + | ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 988 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); + | ^ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': +/build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1171 | hdim->offsets = malloc(n_points * sizeof(double)); + | ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:1173:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1173 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); + | ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1195 | hdim->widths = malloc(n_points * sizeof(double)); + | ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:1197:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1197 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); + | ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': +/build/libminc-2.4.03/libsrc2/volume.c:1421:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1421 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * + | ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:1426:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1426 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); + | ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1509 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); + | ^ +/build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1510 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); + | ^ +/build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); + | ^ +[ 33%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c +[ 33%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c +[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c +/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': +/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 84 | strncpy(buffer, tmp, maxlen); + | ^~~~~~ +[ 35%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c +[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c +[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c +[ 36%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 2819 | ((signed char *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 2823 | ((unsigned char *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 2829 | ((signed short *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 2833 | ((unsigned short *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 2839 | ((signed int *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 2843 | ((unsigned int *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 2847 | ((float *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); + | ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': +/build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; + | ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 244 | ParseLong(argv[srcIndex], &endPtr); + | ^~~~~~~~~ +/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 439 | numSpaces = width + 1 - strlen(infoPtr->key); + | ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 439 | numSpaces = width + 1 - strlen(infoPtr->key); + | ^~~~~ +[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c +In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: +/build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] + 14 | #define MI_ROOT_PATH "/minc-2.0" + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' + 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); + | ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here + 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", + | ^~ +In file included from /usr/include/stdio.h:867, + from /usr/include/hdf5/serial/H5Epublic.h:20, + from /usr/include/hdf5/serial/hdf5.h:26, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 + 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 37 | __bos (__s), __fmt, __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] + 153 | file->sizes_in_file[d] = dimension_size[d]; + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 179 | slices_count*=dimension_size[d]; + | ^~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 179 | slices_count*=dimension_size[d]; + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); + | ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); + | ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); + | ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 499 | slab_size *= file->sizes_in_file[d]; + | ^~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; + | ^~~~ +[ 37%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c +/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': +/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 53 | files = malloc(sizeof(*files) * array_size); + | ^ +/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 76 | files = realloc(files, sizeof(*files) * array_size); + | ^ +[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c +[ 38%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c +/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': +/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] + 134 | offset_next = -1; /* Initialize. */ + | ^ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + | ^ +/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' + 150 | BIT_SET(bitmap, offset_start); + | ^~~~~~~ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + | ^ +/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' + 204 | BIT_SET(bitmap, offset_next); + | ^~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 875 | long_file_start[file_ind] = (long) file_start[file_ind]; + | ^ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 876 | long_file_count[file_ind] = (long) file_count[file_ind]; + | ^ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1214 | slab_size *= count[d]; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); + | ~~~~^~~~~~~~~~~~~~~~~~~ +[ 39%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +[ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c +[ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; @@ -2165,10 +2803,6 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': -/build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 430 | fval[0] = valid_range[0]; - | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ @@ -2178,9 +2812,6 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 431 | fval[1] = valid_range[1]; - | ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ @@ -2208,42 +2839,6 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': -/build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); - | ^~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miadd_child': -/build/libminc-2.4.03/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ - | ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' - 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) - | ^~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, - from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: -/build/libminc-2.4.03/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); - | ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); - | ^~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); - | ^~ -/build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); - | ^~~~~~ -/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': -/build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); - | ^ -[ 22%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': /build/libminc-2.4.03/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; @@ -2393,57 +2988,72 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'get_loop_dim_size': -/build/libminc-2.4.03/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 467 | return dim_length; - | ^~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_variables': -/build/libminc-2.4.03/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 970 | input_vector_length = get_vector_length(inmincid, loop_options); - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1182 | att_length += strlen(arg_string) + 1; - | ^~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1182 | att_length += strlen(arg_string) + 1; - | ^~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'do_voxel_loop': -/build/libminc-2.4.03/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1347 | num_output_files, block_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1714 | num_output_files, block_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_looping': -/build/libminc-2.4.03/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1800 | input_vector_length = get_vector_length(inmincid, loop_options); - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); - | ^~~~~~~~~~~~~~~~~ -[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c -[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c +[ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': +/build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 430 | fval[0] = valid_range[0]; + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 431 | fval[1] = valid_range[1]; + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': +/build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); + | ^~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miadd_child': +/build/libminc-2.4.03/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ + | ^ +/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' + 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) + | ^~~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, + from /build/libminc-2.4.03/libsrc/minc_convenience.c:152: +/build/libminc-2.4.03/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); + | ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); + | ^~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); + | ^~ +/build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); + | ^~~~~~ +/build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': +/build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); + | ^ +[ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c +[ 41%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c +[ 41%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c +[ 42%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c +[ 42%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: +/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': +/build/libminc-2.4.03/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); + | ^ +/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' + 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) + | ^~~~~~~ +/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': +/build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1033 | strlen(value) + 1, value); + | ~~~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); @@ -2492,7 +3102,6 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1185:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1185 | hsize_t temp_size = val_len; | ^~~~~~~ -[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vardef': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1322:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1322 | dims[i] = length; @@ -2508,7 +3117,6 @@ /build/libminc-2.4.03/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c /build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ @@ -2598,79 +3206,6 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ -[ 24%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c -/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': -/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c -/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': -/build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 393 | ucount[j++] = dim_len[i]; - | ^~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - | ^~~~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc.h:172, - from /build/libminc-2.4.03/libsrc/minc_private.h:83, - from /build/libminc-2.4.03/libsrc/minc_simple.c:38: -/build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 67 | #define nctypelen MI2typelen -/build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' - 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - | ^~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * - | ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * - | ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 446 | p_var->var_atts = malloc(p_var->var_natts * - | ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_transform_to_world': -/build/libminc-2.4.03/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 1026 | input[0] = voxel[spatial_axes[0]]; - | ^~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 1027 | input[1] = voxel[spatial_axes[1]]; - | ^~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 1028 | input[2] = voxel[spatial_axes[2]]; - | ^~~~~ -[ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -[ 25%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c -[ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c -[ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: -/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': -/build/libminc-2.4.03/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); - | ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' - 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) - | ^~~~~~~ -/build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': -/build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1033 | strlen(value) + 1, value); - | ~~~~~~~~~~~~~~^~~ -[ 26%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c -[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); @@ -2740,12 +3275,6 @@ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ -[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c -[ 28%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c -[ 28%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.03/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 467 | return dim_length; @@ -2793,206 +3322,12 @@ /build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ -[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c -[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c -[ 29%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c -[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c -[ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o +[ 43%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c -[ 31%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c -[ 32%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); - | ^ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:89, - from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: -/build/libminc-2.4.03/libsrc/hdf_convenience.c:209:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 209 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); - | ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 370 | int typ_size = H5Tget_size(typ_id); - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:371:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] - 371 | int spc_size = H5Sget_simple_extent_npoints(spc_id); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attname': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:455:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 455 | att_id = H5Aopen_idx(loc_id, attnum); - | ^~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:458:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] - 458 | status = H5Aget_name(att_id, MAX_NC_NAME, name); - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attinq': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:578:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 578 | *length_ptr = typ_size; - | ^~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:581:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] - 581 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:667:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 667 | length = H5Tget_size(typ_id); - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_dimdef': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:958:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 958 | hdf_set_length(var->dset_id, dimnm, length); - | ^~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attput': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1147:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1147 | H5Tset_size(ftyp_id, val_len); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1185:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1185 | hsize_t temp_size = val_len; - | ^~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vardef': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1322:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1322 | dims[i] = length; - | ^~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1369:60: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1369 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { - | ^ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); - | ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN' - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1373:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1373 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); - | ^ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN' - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1381:38: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1381 | chkdims[i] = chunk_length; - | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1386:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1386 | H5Pset_deflate(prp_id, comp_level); - | ^~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1418:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 1418 | hdf_set_length(dst_id, varnm, dim->length); - | ~~~^~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varget': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1534:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1534 | fstart[i] = start_ptr[i]; - | ^~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1535:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1535 | count[i] = length_ptr[i]; - | ^~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varputg': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1633:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1633 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); - | ~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1649:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1649 | mystart[idim] = start != NULL ? start[idim] : 0; - | ^~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1658:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1658 | myedges[idim] = edges[idim]; - | ^~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1682:29: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] - 1682 | length[idim] = mymap[idim] * myedges[idim]; - | ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1683:45: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] - 1683 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; - | ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1740:16: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] - 1740 | mystart[idim] += mystride[idim]; - | ^~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1742:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1742 | mystart[idim] = start[idim]; - | ^~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vargetg': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1810:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1810 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); - | ~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:39: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; - | ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:22: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] - 1837 | myedges[idim] = varp->dims[idim] - mystart[idim]; - | ^~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varput': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1957:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1957 | fstart[i] = start_ptr[i]; - | ^~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1958:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 1958 | count[i] = length_ptr[i]; - | ^~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varsize': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2069:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] - 2069 | size_ptr[i] = dims[i]; - | ^~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 2103 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_open': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 2223 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2239:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2239 | file_id = H5Fopen(path, mode, fpid); - | ^~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2249:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2249 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; - | ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2271:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 2271 | dims[ndims++] = H5Tget_nmembers(type_id); - | ^~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_create': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2331:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 2331 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); - | ^~~~~ -/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': -/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': -/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 184 | volume_filename = alloc_string( string_length(prefix_filename) + - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ - 185 | 100 ); - | ~~~ -[ 32%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c -[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c -[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: -/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' - 532 | start[d] = VIO_FLOOR( pos ); - | ^~~~~~~~~ -[ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o +[ 43%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c -[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c -[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c +[ 44%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; @@ -3033,247 +3368,61 @@ /build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1028 | input[2] = voxel[spatial_axes[2]]; | ^~~~~ -[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c -[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c -[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c -[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1249 | directory = alloc_string( slash_index ); - | ^~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 2445 | *str = alloc_string( length ); - | ^~~~~~ -[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 222 | progress->n_dots_so_far = n_dots; - | ^~~~~~ -[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 40 | str = alloc_string( string_length(initial) ); - | ^~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -[ 38%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c -[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c -/build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': -/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] - 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); - | ^ -/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] - 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); - | ^ -[ 38%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o +/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': +/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o +[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' - 238 | i = VIO_FLOOR( x ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' - 239 | j = VIO_FLOOR( y ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' - 240 | k = VIO_FLOOR( z ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] - 257 | coefs[c] = outside_value; - | ^~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] - 305 | out_rgb[i] = c0 + w * dw; - | ^~ -[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' - 404 | i = VIO_FLOOR( x ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' - 405 | j = VIO_FLOOR( y ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' - 406 | k = VIO_FLOOR( z ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' - 407 | l = VIO_FLOOR( t ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' - 408 | m = VIO_FLOOR( v ); - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' - 1010 | start[d] = VIO_FLOOR( pos ); - | ^~~~~~~~~ -[ 40%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o +[ 44%] Linking C shared library libminc2.so +/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 +[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 613 | slab_size *= file->sizes_in_file[d]; - | ^~~~ -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:21: -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' - 616 | slab_size *= MIN( file->sizes_in_file[d], - | ^~~ -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o +/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o CMakeFiles/minc2.dir/libsrc2/volume.c.o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o CMakeFiles/minc2.dir/libcommon/minc_config.c.o CMakeFiles/minc2.dir/libcommon/minc_error.c.o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o CMakeFiles/minc2.dir/libcommon/restructure.c.o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lnetcdf -lm -ldl -lnetcdf -ldl -lm -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl +[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c -[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c -[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c -[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c -[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c -[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: -/build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' - 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' - 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); - | ^~~~~~~~~ -[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o +[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c -[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 779 | new_history = alloc_string( old_att_length ); - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1473 | slab_size *= count[d]; - | ^~~~~ -[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so +[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c -[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c -[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 48%] Built target minc2 +make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/depend.internal". +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c -[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c +Scanning dependencies of target minc_io +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 48%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o +[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ -[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 2819 | ((signed char *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 2823 | ((unsigned char *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 2829 | ((signed short *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 2833 | ((unsigned short *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 2839 | ((signed int *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 2843 | ((unsigned int *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 2847 | ((float *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); - | ^ -[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c -[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c +[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c +[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: @@ -3284,85 +3433,148 @@ /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' 532 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ -[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] - 153 | file->sizes_in_file[d] = dimension_size[d]; - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 179 | slices_count*=dimension_size[d]; - | ^~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 179 | slices_count*=dimension_size[d]; - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 499 | slab_size *= file->sizes_in_file[d]; - | ^~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; - | ^~~~ -[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c -[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c [ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 875 | long_file_start[file_ind] = (long) file_start[file_ind]; - | ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 876 | long_file_count[file_ind] = (long) file_count[file_ind]; - | ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1214 | slab_size *= count[d]; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); - | ~~~~^~~~~~~~~~~~~~~~~~~ [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c [ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c +In file included from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) + | ~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 189 | return _slice_dimensions; + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 203 | if(j>=0) return _info[j].length; [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:593:51: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 593 | _info[i].start+=_info[i].step*(dimlength-1); + | ~~~~~~~~~~^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:656:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 656 | _slab_len*=_info[_ndims-i-1].length; + | ^~~~~~ [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::open(const char*, const minc_info&, int, nc_type, int)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:712:22: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 712 | _ndims=_info.size(); + | ~~~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:746:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 746 | _slab_len*=_info[_ndims-i-1].length; + | ^~~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c +In file included from /build/libminc-2.4.03/ezminc/minc_1_rw.h:21, + from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_float()': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:842:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 842 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:843:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 843 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:850:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 850 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:851:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 851 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:857:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 857 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:858:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 858 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_double()': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:918:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 918 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:919:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 919 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:926:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 926 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:927:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 927 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:933:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 933 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:934:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 934 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); + | ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' + 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} + | ^~~ [ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::append_history(const char*)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1459:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1459 | att_length += strlen(append_history) + 1; + | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const char*)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1488:76: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1488 | ncattput(_mincid, create_var_id(varname),attname, NC_CHAR, strlen(val) + 1, val); + | ~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1493:74: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1493 | ncattput(_mincid, create_var_id(varname),attname, NC_DOUBLE, val.size(), &val[0]); + | ~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1498:71: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1498 | ncattput(_mincid, create_var_id(varname),attname, NC_INT, val.size(), &val[0]); + | ~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1503:73: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1503 | ncattput(_mincid, create_var_id(varname),attname, NC_SHORT, val.size(), &val[0]); + | ~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': +/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1508:72: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1508 | ncattput(_mincid, create_var_id(varname),attname, NC_BYTE, val.size(), &val[0]); + | ~~~~~~~~^~ [ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c -[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); @@ -3371,18 +3583,26 @@ /build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ -[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o +[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 222 | progress->n_dots_so_far = n_dots; + | ^~~~~~ +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c /build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': /build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); @@ -3390,18 +3610,9 @@ /build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 222 | progress->n_dots_so_far = n_dots; - | ^~~~~~ -[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c -[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c [ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c -[ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c +[ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: @@ -3430,6 +3641,7 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: @@ -3471,6 +3683,21 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' 1010 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ +[ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: +/build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' + 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) + | ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' + 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); + | ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); @@ -3490,22 +3717,6 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' 616 | slab_size *= MIN( file->sizes_in_file[d], | ^~~ -[ 56%] Linking C shared library libminc2.so -/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: -/build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' - 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) - | ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' - 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); - | ^~~~~~~~~ -/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o CMakeFiles/minc2.dir/libsrc2/volume.c.o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o CMakeFiles/minc2.dir/libcommon/minc_config.c.o CMakeFiles/minc2.dir/libcommon/minc_error.c.o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o CMakeFiles/minc2.dir/libcommon/restructure.c.o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lnetcdf -lm -ldl -lnetcdf -ldl -lm -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl [ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c [ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o @@ -3518,22 +3729,8 @@ /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1473 | slab_size *= count[d]; | ^~~~~ -/usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 57%] Built target minc2 -make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/depend.internal". -Scanning dependencies of target minc_io -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 58%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o @@ -3575,150 +3772,8 @@ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ -[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c -In file included from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) - | ~~~~~~~~~~~~~~~~~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 189 | return _slice_dimensions; - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 203 | if(j>=0) return _info[j].length; -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:593:51: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 593 | _info[i].start+=_info[i].step*(dimlength-1); - | ~~~~~~~~~~^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:656:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 656 | _slab_len*=_info[_ndims-i-1].length; - | ^~~~~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::open(const char*, const minc_info&, int, nc_type, int)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:712:22: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 712 | _ndims=_info.size(); - | ~~~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:746:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 746 | _slab_len*=_info[_ndims-i-1].length; - | ^~~~~~ -In file included from /build/libminc-2.4.03/ezminc/minc_1_rw.h:21, - from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_float()': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:842:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 842 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:843:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 843 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:850:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 850 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:851:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 851 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:857:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 857 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:858:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 858 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_double()': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:918:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 918 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:919:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 919 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:926:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 926 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:927:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 927 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:933:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 933 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:934:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 934 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); - | ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' - 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} - | ^~~ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 875 | long_file_start[file_ind] = (long) file_start[file_ind]; - | ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 876 | long_file_count[file_ind] = (long) file_count[file_ind]; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::append_history(const char*)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1459:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1459 | att_length += strlen(append_history) + 1; - | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1214 | slab_size *= count[d]; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const char*)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1488:76: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1488 | ncattput(_mincid, create_var_id(varname),attname, NC_CHAR, strlen(val) + 1, val); - | ~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1493:74: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1493 | ncattput(_mincid, create_var_id(varname),attname, NC_DOUBLE, val.size(), &val[0]); - | ~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1498:71: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1498 | ncattput(_mincid, create_var_id(varname),attname, NC_INT, val.size(), &val[0]); - | ~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1503:73: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1503 | ncattput(_mincid, create_var_id(varname),attname, NC_SHORT, val.size(), &val[0]); - | ~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': -/build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1508:72: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1508 | ncattput(_mincid, create_var_id(varname),attname, NC_BYTE, val.size(), &val[0]); - | ~~~~~~~~^~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); @@ -3760,11 +3815,27 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ +[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 875 | long_file_start[file_ind] = (long) file_start[file_ind]; + | ^ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 876 | long_file_count[file_ind] = (long) file_count[file_ind]; + | ^ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1214 | slab_size *= count[d]; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); + | ~~~~^~~~~~~~~~~~~~~~~~~ +[ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= -[ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". Scanning dependencies of target minc2-leak-test @@ -3773,6 +3844,11 @@ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 60%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.03/testdir/minc2-leak-test.c +make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'check_high_water_mark': /build/libminc-2.4.03/testdir/minc2-leak-test.c:36:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 36 | return usage.ru_maxrss; @@ -3807,6 +3883,7 @@ /build/libminc-2.4.03/testdir/minc2-leak-test.c:235:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 235 | buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); | ^ +Scanning dependencies of target minc2-read-metadata /build/libminc-2.4.03/testdir/minc2-leak-test.c:253:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 253 | start[0] = i; | ^ @@ -3814,67 +3891,52 @@ /build/libminc-2.4.03/testdir/minc2-leak-test.c:306:46: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); | ^~~~~ -make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". -Scanning dependencies of target minc2-read-metadata make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 60%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.03/testdir/minc2-read-metadata.c -[ 61%] Linking C executable minc2-leak-test +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". +Scanning dependencies of target minc2-vector_dimension-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 61%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c +[ 62%] Linking C executable minc2-leak-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 62%] Linking C executable minc2-read-metadata +[ 63%] Linking C executable minc2-read-metadata cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 131 | coords[3] = i; + | ^ +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 166 | coords[0] = i; + | ^ /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= -[ 62%] Built target minc2-leak-test make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". -Scanning dependencies of target minc2-vector_dimension-test Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/depend.internal". -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build Scanning dependencies of target minc2-slice-test -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 63%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c [ 64%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.03/testdir/minc2-slice-test.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 64%] Built target minc2-read-metadata +[ 64%] Built target minc2-leak-test make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". -Scanning dependencies of target minc2-record-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 131 | coords[3] = i; - | ^ -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 166 | coords[0] = i; - | ^ -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend +[ 64%] Linking C executable minc2-vector_dimension-test /build/libminc-2.4.03/testdir/minc2-slice-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 29 | coords[0] = i; /*Z*/ @@ -3885,10 +3947,17 @@ /build/libminc-2.4.03/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 31 | coords[2] = rand()%CY; /*Y*/ | ^~~~ +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". +Scanning dependencies of target minc2-record-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 64%] Built target minc2-read-metadata +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:18, from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp:18: @@ -3896,6 +3965,8 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; @@ -3904,28 +3975,18 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; [ 65%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.03/testdir/minc2-record-test.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/depend.internal". -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.03/testdir/minc2-record-test.c -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/depend.internal". Scanning dependencies of target test_mconv make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 65%] Linking C executable minc2-slice-test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build -Scanning dependencies of target minc_types -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 66%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c -[ 66%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c -[ 66%] Linking C executable minc2-slice-test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 -[ 66%] Linking C executable minc2-vector_dimension-test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-record-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 85 | coords[0] = i; @@ -3945,109 +4006,94 @@ /build/libminc-2.4.03/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 107 | coords[2] = k; | ^ -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 66%] Linking C executable minc2-record-test +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_types.dir/depend.internal". +Scanning dependencies of target minc_types +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 67%] Linking C static library libminc2_static.a +/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake +[ 67%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c +[ 67%] Linking C executable minc2-record-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 -[ 66%] Linking C executable test_mconv -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 67%] Linking C executable minc_types -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 +/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 +/usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/usr/bin/ranlib libminc2_static.a +[ 67%] Built target minc2-vector_dimension-test make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 67%] Linking C executable test_mconv +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/depend.internal". -[ 67%] Built target minc2-slice-test Scanning dependencies of target icv_dim make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build -[ 67%] Built target minc2-vector_dimension-test make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 67%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c +[ 67%] Built target minc2_static make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend +[ 67%] Built target minc2-slice-test make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/depend.internal". -[ 67%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/depend.internal". -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/depend.internal". Scanning dependencies of target minc2-volprops-test +Scanning dependencies of target minc2-datatype-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build -Scanning dependencies of target minc2-datatype-test -[ 68%] Linking C static library libminc2_static.a +Scanning dependencies of target minc_conversion make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 68%] Linking C executable minc_types +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build -/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 68%] Built target minc2-record-test -/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= -/usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o [ 68%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.03/testdir/minc2-volprops-test.c -/usr/bin/ranlib libminc2_static.a +[ 68%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c [ 68%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.03/testdir/minc2-datatype-test.c -[ 68%] Built target test_mconv +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 68%] Built target minc2-record-test make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/depend.internal". make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -Scanning dependencies of target minc_conversion -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 68%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/depend.internal". Scanning dependencies of target minc2-read-rgb make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build -[ 68%] Built target minc2_static -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= -[ 68%] Built target minc_types -make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". [ 68%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.03/testdir/minc2-read-rgb.c -Scanning dependencies of target minc_long_attr -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/depend.internal". -Scanning dependencies of target mincapi -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 68%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c -[ 69%] Linking C executable minc2-datatype-test /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test2': /build/libminc-2.4.03/testdir/minc_conversion.c:156:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; @@ -4062,8 +4108,6 @@ /build/libminc-2.4.03/testdir/minc_conversion.c:192:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 192 | total *= dims[i].length; | ^~ -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 -[ 69%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o /build/libminc-2.4.03/testdir/minc_conversion.c:263:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ @@ -4074,7 +4118,6 @@ 263 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test4': -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.03/testdir/mincapi.c /build/libminc-2.4.03/testdir/minc_conversion.c:368:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] 368 | float tmp = (i * 10000) + (j * 100) + k; | ^ @@ -4082,6 +4125,7 @@ /build/libminc-2.4.03/testdir/minc_conversion.c:414:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 414 | return (errors); | ^ +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'calculate_mean_f': /build/libminc-2.4.03/testdir/minc2-read-rgb.c:23:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 23 | return avg/length; @@ -4113,10 +4157,40 @@ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:134:53: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 134 | r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step); | ^~~~ +[ 68%] Built target test_mconv +make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". +Scanning dependencies of target minc_long_attr +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 69%] Linking C executable icv_dim +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 +[ 69%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 70%] Linking C executable minc2-volprops-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 71%] Linking C executable minc2-datatype-test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 71%] Built target minc_types +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/mincapi.dir/depend.internal". +Scanning dependencies of target mincapi +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 71%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.03/testdir/mincapi.c /build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test1': /build/libminc-2.4.03/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 125 | ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); @@ -4134,13 +4208,13 @@ /build/libminc-2.4.03/testdir/minc_long_attr.c:262:37: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 262 | if(memcmp(att,ip->large_attribute,att_length)!=0) | ^~~~~~~~~~ -[ 71%] Linking C executable icv_dim /build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'main': /build/libminc-2.4.03/testdir/minc_long_attr.c:298:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 298 | return (errors); | ^ -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 71%] Linking CXX shared library libminc_io.so +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/mincapi.c: In function 'test3': /build/libminc-2.4.03/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 209 | total *= dims[i].length; @@ -4170,72 +4244,52 @@ /build/libminc-2.4.03/testdir/mincapi.c:799:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 799 | return (errors); | ^ -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 71%] Built target icv_dim make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= -[ 71%] Built target minc2-datatype-test +[ 71%] Built target minc2-volprops-test make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend -[ 72%] Linking C executable minc_long_attr -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= -[ 73%] Linking C executable minc_conversion -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/depend.internal". Scanning dependencies of target test_xfm -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_range.dir/depend.internal". -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build Scanning dependencies of target icv_range +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 74%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c -[ 75%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 72%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /build/libminc-2.4.03/testdir/icv_range.c -[ 75%] Built target minc2-volprops-test +[ 73%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o +[ 73%] Built target minc2-datatype-test make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c +[ 74%] Linking C executable minc_conversion +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/depend.internal". Scanning dependencies of target icv_vec make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 76%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o +[ 75%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.03/testdir/icv_vec.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 76%] Built target minc_long_attr -make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend -[ 76%] Linking C executable test_xfm -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 -[ 76%] Built target minc_conversion -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". -Scanning dependencies of target icv_fillvalue -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". +[ 76%] Linking C executable minc_long_attr +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/icv_vec.c: In function 'test_icv_vector': /build/libminc-2.4.03/testdir/icv_vec.c:65:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 65 | short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); @@ -4249,169 +4303,186 @@ /build/libminc-2.4.03/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL' 126 | ivalue[c] = TVAL(i, j, k, v); | ^~~~ -Scanning dependencies of target minc2-grpattr-test [ 76%] Linking C executable icv_range -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 76%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.03/testdir/icv_fillvalue.c +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 76%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c -[ 76%] Linking C executable minc2-read-rgb -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 77%] Linking C executable mincapi -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 77%] Linking CXX shared library libminc_io.so -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 76%] Linking C executable test_xfm +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 +[ 76%] Built target minc_io +make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 77%] Linking C executable icv_vec -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 -[ 77%] Linking C executable icv_fillvalue -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 -[ 77%] Built target test_xfm +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 76%] Built target minc_conversion +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= +[ 76%] Built target minc_long_attr make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend +Scanning dependencies of target icv_fillvalue make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". Scanning dependencies of target minc_tst make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +Scanning dependencies of target minc2-grpattr-test +[ 76%] Linking C executable minc2-read-rgb +[ 76%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.03/testdir/icv_fillvalue.c +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 77%] Built target icv_range +[ 76%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c +[ 76%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/build/libminc-2.4.03/testdir/minc.c: In function 'main': +/build/libminc-2.4.03/testdir/minc.c:60:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 60 | ioff=(j*count[1]+i)*count[2]; + | ^ +[ 76%] Built target icv_range make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= -[ 77%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c -[ 77%] Built target minc2-read-rgb -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so +[ 76%] Built target test_xfm Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/depend.internal". +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend Scanning dependencies of target multidim_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/depend.internal". Scanning dependencies of target minc2-label-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build +[ 76%] Linking C executable icv_fillvalue +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 76%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 77%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c +[ 78%] Linking C executable minc_tst +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 79%] Linking C executable mincapi +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 +[ 79%] Linking C executable icv_vec +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 77%] Built target mincapi -/build/libminc-2.4.03/testdir/minc.c: In function 'main': -/build/libminc-2.4.03/testdir/minc.c:60:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 60 | ioff=(j*count[1]+i)*count[2]; - | ^ +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 79%] Built target minc2-read-rgb make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend -[ 78%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -[ 78%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c -[ 78%] Linking C executable minc2-grpattr-test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= -[ 78%] Built target icv_vec -[ 78%] Built target minc_io -make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c +/build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': +/build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 110 | coords[0] = i; + | ^ +/build/libminc-2.4.03/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 111 | coords[1] = j; + | ^ +/build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 112 | coords[2] = k; + | ^ Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". Scanning dependencies of target create_grid_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 79%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o +[ 80%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 79%] Built target icv_fillvalue -make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 80%] Built target minc_tst +make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/depend.internal". Scanning dependencies of target icv make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -Scanning dependencies of target verify_xfm make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 80%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 80%] Built target icv_fillvalue +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= +[ 80%] Built target icv_vec +make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 79%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c -[ 79%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -[ 80%] Linking C executable minc_tst -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/depend.internal". +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +Scanning dependencies of target verify_xfm +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/depend.internal". -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target icv_dim1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build -/build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': -/build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 110 | coords[0] = i; - | ^ -/build/libminc-2.4.03/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 111 | coords[1] = j; - | ^ -/build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 112 | coords[2] = k; - | ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 80%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o +[ 80%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c +[ 81%] Linking C executable icv +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 +[ 81%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.03/testdir/icv_dim1.c -[ 80%] Linking C executable create_grid_xfm -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -[ 80%] Built target minc2-grpattr-test +[ 81%] Built target mincapi make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 81%] Linking C executable minc2-label-test make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/depend.internal". -[ 81%] Linking C executable icv -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Scanning dependencies of target minc2-convert-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 82%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.03/testdir/minc2-convert-test.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 82%] Built target minc_tst -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= -[ 83%] Linking C executable icv_dim1 +[ 82%] Linking C executable create_grid_xfm +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 83%] Linking C executable verify_xfm +[ 83%] Linking C executable minc2-grpattr-test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-convert-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 97 | coords[0] = i; @@ -4431,33 +4502,32 @@ /build/libminc-2.4.03/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 103 | voxel[2] = coords[2]; | ^~~~~~ -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 -[ 84%] Linking C executable verify_xfm -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -Scanning dependencies of target minc2-multires-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build +[ 83%] Built target icv +make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -[ 84%] Built target create_grid_xfm +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= +[ 83%] Built target minc2-label-test make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". +Scanning dependencies of target minc2-multires-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 84%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c -[ 84%] Linking C executable minc2-label-test +make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/depend.internal". -[ 84%] Built target icv -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target minc2-create-test-images-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 83%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c +[ 83%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c /build/libminc-2.4.03/testdir/minc2-multires-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 79 | coords[0] = i; @@ -4471,45 +4541,8 @@ /build/libminc-2.4.03/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 83 | voxel = i*10000 + j*100 + k; | ^ -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". -Scanning dependencies of target minc2-create-test-images -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 84%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c -[ 84%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 84%] Linking C executable minc2-convert-test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 -[ 84%] Built target icv_dim1 -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_3D_image': -/build/libminc-2.4.03/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 137 | start[0] = i; - | ^ -/build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_4D_image': -/build/libminc-2.4.03/testdir/minc2-create-test-images.c:210:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 210 | start[0] = i; - | ^ -/build/libminc-2.4.03/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 212 | start[1] = j; - | ^ -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". -Scanning dependencies of target test_arg_parse -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build +[ 84%] Linking C executable icv_dim1 +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 78 | start[0] = i; @@ -4521,50 +4554,77 @@ /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 154 | start[0] = i; | ^ +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 84%] Built target create_grid_xfm +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 84%] Built target minc2-grpattr-test +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= [ 85%] Linking C executable minc2-multires-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 86%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c -[ 86%] Built target verify_xfm +[ 85%] Linking C executable minc2-convert-test +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". +[ 85%] Built target verify_xfm +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". +Scanning dependencies of target minc2-create-test-images make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 87%] Linking C executable minc2-create-test-images -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +Scanning dependencies of target test_arg_parse +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 85%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". Scanning dependencies of target minc2-large-attribute make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build -[ 87%] Built target minc2-label-test +[ 86%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 87%] Linking C executable minc2-create-test-images-2 +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 88%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c +/build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_3D_image': +/build/libminc-2.4.03/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 137 | start[0] = i; + | ^ +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_4D_image': +/build/libminc-2.4.03/testdir/minc2-create-test-images.c:210:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 210 | start[0] = i; + | ^ +/build/libminc-2.4.03/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 212 | start[1] = j; + | ^ +[ 88%] Built target icv_dim1 make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= -[ 88%] Linking C executable minc2-create-test-images-2 -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 -[ 89%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/depend.internal". -[ 89%] Linking C executable test_arg_parse -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target minc2-valid-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 89%] Built target minc2-convert-test -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-large-attribute.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | start[0] = i; @@ -4578,36 +4638,54 @@ /build/libminc-2.4.03/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 94 | miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); | ^~~~~~~~~~~~~~ +[ 89%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.03/testdir/minc2-valid-test.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 90%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o +[ 89%] Built target minc2-convert-test +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend +[ 90%] Linking C executable minc2-create-test-images +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= +[ 90%] Linking C executable test_arg_parse +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.03/testdir/minc2-valid-test.c Scanning dependencies of target minc2-full-test +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 90%] Built target minc2-multires-test +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' [ 90%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o +[ 90%] Built target minc2-create-test-images-2 cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.03/testdir/minc2-full-test.c -[ 90%] Linking C executable minc2-large-attribute -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/volume_test.dir/depend.internal". +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= +[ 90%] Linking C executable minc2-large-attribute +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 Scanning dependencies of target volume_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/depend.internal". /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 90%] Built target minc2-create-test-images -make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= +Scanning dependencies of target copy_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 90%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c /build/libminc-2.4.03/testdir/minc2-full-test.c: In function 'test1': /build/libminc-2.4.03/testdir/minc2-full-test.c:111:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 111 | coords[0] = i; @@ -4643,77 +4721,49 @@ /build/libminc-2.4.03/testdir/minc2-full-test.c:251:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 251 | coords[2] = k; | ^ -[ 90%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/depend.internal". -[ 90%] Built target minc2-create-test-images-2 -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend -Scanning dependencies of target copy_xfm -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 90%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c [ 90%] Linking C executable minc2-valid-test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". -Scanning dependencies of target minc2-hyper-test-2 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 91%] Linking C executable minc2-full-test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 91%] Built target minc2-create-test-images +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 90%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c -[ 90%] Linking C executable multidim_test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 -[ 91%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 91%] Built target test_arg_parse +[ 91%] Built target minc2-valid-test make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 72 | start[0] = i; - | ^ -[ 92%] Linking C executable minc2-full-test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/depend.internal". Scanning dependencies of target minc2-hyper-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build +Scanning dependencies of target minc2-hyper-test-2 make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 92%] Built target minc2-large-attribute -make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= -[ 93%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test.c -[ 93%] Linking C executable minc2-hyper-test-2 -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 -Scanning dependencies of target create_grid_file make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 92%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test.c +[ 93%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 94%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp -[ 94%] Linking C executable copy_xfm +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 72 | start[0] = i; + | ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'create_and_test_image': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:89:26: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] 89 | stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); | ^ -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/minc2-hyper-test.c:261:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | start[0] = i; | ^ @@ -4736,61 +4786,82 @@ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:458:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] 458 | short t = stmp2[i][j][k]; | ^~~~~ -[ 94%] Built target multidim_test +[ 93%] Built target test_arg_parse +make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'test3': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 814 | start[0] = i; | ^ -make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend /build/libminc-2.4.03/testdir/minc2-hyper-test.c:815:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 815 | start[1] = j; | ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 816 | start[2] = k; | ^ +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -Scanning dependencies of target volume_msq_dist +[ 93%] Linking C executable multidim_test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". +[ 93%] Built target minc2-full-test +make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend +Scanning dependencies of target create_grid_file make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build +[ 93%] Linking C executable copy_xfm make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 94%] Built target minc2-valid-test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= +make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build +[ 93%] Built target minc2-large-attribute +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= -[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". +Scanning dependencies of target volume_msq_dist +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-aarch64-linux-gnu /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/depend.internal". +make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build +[ 94%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target volume_avg make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build -[ 94%] Built target minc2-full-test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp +[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp +[ 94%] Linking C executable minc2-hyper-test-2 +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 94%] Built target minc2-hyper-test-2 make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' cd /build/libminc-2.4.03/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= -[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp +[ 95%] Linking C executable volume_test Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target trilinear_resample make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 95%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 96%] Linking C executable volume_test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 96%] Built target minc2-hyper-test-2 +[ 96%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o +[ 96%] Built target multidim_test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend [ 96%] Built target copy_xfm make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' @@ -4803,18 +4874,22 @@ Scanning dependencies of target ezminc_rw_test2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend.internal". +make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' Scanning dependencies of target ezminc_rw_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 96%] Linking C executable minc2-hyper-test +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 +[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-aarch64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp -In file included from /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:15: +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, + from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:5: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4826,8 +4901,20 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, - from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:5: +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 97%] Built target minc2-hyper-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:15: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4839,7 +4926,29 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 97%] Built target volume_test +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, + from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:11: +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::vect minc::simple_volume::voxel_to_world(const idx&) const [with T = minc::fixed_vec<3, float>; minc::simple_volume::vect = minc::fixed_vec<3, double>; minc::simple_volume::idx = minc::fixed_vec<3, long unsigned int>]': +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:112:69: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:35: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'long unsigned int' to 'double' may change value [-Wconversion] + 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + | ~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:71: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + | ^ In file included from /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:17: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:70:49: required from here @@ -4873,39 +4982,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]' /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:72:55: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] -[ 97%] Built target volume_test -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:11: -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::vect minc::simple_volume::voxel_to_world(const idx&) const [with T = minc::fixed_vec<3, float>; minc::simple_volume::vect = minc::fixed_vec<3, double>; minc::simple_volume::idx = minc::fixed_vec<3, long unsigned int>]': -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:112:69: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:35: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'long unsigned int' to 'double' may change value [-Wconversion] - 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - | ~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:71: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - | ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = minc::fixed_vec<3, float>]': /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:160:9: required from 'minc::simple_volume::simple_volume(size_t, size_t, size_t) [with T = minc::fixed_vec<3, float>; size_t = long unsigned int]' /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:103:45: required from here @@ -4958,18 +5034,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ -In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:15: -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) - | ~~~~~~~~~~~~~~~~~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 189 | return _slice_dimensions; - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:15: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -4982,152 +5046,6 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); - | ~~~~^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - | ~^~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - | ~^~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - | ~^~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:80:26: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 185 | _size[i]=0; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 186 | _step[i]=0.0; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 187 | _start[i]=0.0; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 190 | _direction_cosines[i][i]=1.0; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:71: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 327 | size_t x=floor(_x); - | ~~~~~^~~~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 328 | size_t y=floor(_y); - | ~~~~~^~~~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 329 | size_t z=floor(_z); - | ~~~~~^~~~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 331 | float dx=_x-x; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 332 | float dy=_y-y; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 333 | float dz=_z-z; - | ^ -In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 215 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 216 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 217 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 215 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 216 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 217 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 238 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 239 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 240 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 238 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 239 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 240 | str*=rw.ndim(i); - | ^ -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:31:15: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 53 | _stride[i]=_size[i-1]*_stride[i-1]; - | ^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 53 | _stride[i]=_size[i-1]*_stride[i-1]; - | ~^~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 53 | _stride[i]=_size[i-1]*_stride[i-1]; - | ~^~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 54 | total*=_size[i]; - | ^ -In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] - 66 | if(_cur[i](_rw->dim(i).length)) - | ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] -[ 97%] Linking C executable minc2-hyper-test -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:1: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -5251,6 +5169,10 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 27 | vol(x,y,z)=x+y+z; + | ~~~^~ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' @@ -5263,51 +5185,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] -In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:7: -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) - | ~~~~~~~~~~~~~~~~~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 189 | return _slice_dimensions; - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 203 | if(j>=0) return _info[j].length; -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 97%] Built target minc2-hyper-test -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 27 | vol(x,y,z)=x+y+z; - | ~~~^~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 36 | volume*=info[i].length; - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, unsigned char>::value_type' {aka 'unsigned char'} may change value [-Wfloat-conversion] - 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; - | ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - 59 | short_attr[i]=i; - | ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 36 | volume*=info[i].length; - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} may change value [-Wfloat-conversion] - 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; - | ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - 59 | short_attr[i]=i; - | ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 36 | volume*=info[i].length; - | ~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:19:26: required from here @@ -5338,20 +5215,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:264:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 264 | str*=rw.ndim(dimorder[i]); | ~~~~~~~~~~^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] - 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; - | ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - 59 | short_attr[i]=i; - | ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 36 | volume*=info[i].length; - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - 59 | short_attr[i]=i; - | ^ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'size_t minc::simple_volume::dim(size_t) const [with T = float; size_t = long unsigned int]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:23:31: required from here @@ -5396,6 +5259,214 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ +In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:15: +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) + | ~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 189 | return _slice_dimensions; + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 203 | if(j>=0) return _info[j].length; +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); + | ~~~~^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + | ~^~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + | ~^~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + | ~^~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, + from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:80:26: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 185 | _size[i]=0; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 186 | _step[i]=0.0; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 187 | _start[i]=0.0; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 190 | _direction_cosines[i][i]=1.0; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:71: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 327 | size_t x=floor(_x); + | ~~~~~^~~~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 328 | size_t y=floor(_y); + | ~~~~~^~~~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 329 | size_t z=floor(_z); + | ~~~~~^~~~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 331 | float dx=_x-x; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 332 | float dy=_y-y; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 333 | float dz=_z-z; + | ^ +In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 215 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 216 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 217 | str*=rw.ndim(i); + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 215 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 216 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 217 | str*=rw.ndim(i); + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 238 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 239 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 240 | str*=rw.ndim(i); + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 238 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 239 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 240 | str*=rw.ndim(i); + | ^ +In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:7: +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) + | ~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 189 | return _slice_dimensions; + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 203 | if(j>=0) return _info[j].length; +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, + from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:31:15: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 53 | _stride[i]=_size[i-1]*_stride[i-1]; + | ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 53 | _stride[i]=_size[i-1]*_stride[i-1]; + | ~^~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 53 | _stride[i]=_size[i-1]*_stride[i-1]; + | ~^~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 54 | total*=_size[i]; + | ^ +In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] + 66 | if(_cur[i](_rw->dim(i).length)) + | ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 36 | volume*=info[i].length; + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, unsigned char>::value_type' {aka 'unsigned char'} may change value [-Wfloat-conversion] + 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; + | ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + 59 | short_attr[i]=i; + | ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 36 | volume*=info[i].length; + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} may change value [-Wfloat-conversion] + 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; + | ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + 59 | short_attr[i]=i; + | ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 36 | volume*=info[i].length; + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] + 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; + | ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + 59 | short_attr[i]=i; + | ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 36 | volume*=info[i].length; + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + 59 | short_attr[i]=i; + | ^ In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:8: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = unsigned char]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' @@ -5518,27 +5589,27 @@ [ 98%] Linking CXX executable volume_msq_dist cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[ 98%] Built target volume_msq_dist [ 99%] Linking CXX executable ezminc_rw_test2 cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 99%] Built target volume_msq_dist +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 99%] Linking CXX executable create_grid_file +cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 +[ 99%] Built target ezminc_rw_test2 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[ 99%] Built target create_grid_file [100%] Linking CXX executable volume_avg cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf -[100%] Linking CXX executable create_grid_file -cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' +[100%] Built target volume_avg [100%] Linking CXX executable trilinear_resample cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[100%] Built target ezminc_rw_test2 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[100%] Built target volume_avg -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' -[100%] Built target create_grid_file [100%] Built target trilinear_resample [100%] Linking CXX executable ezminc_rw_test cd /build/libminc-2.4.03/obj-aarch64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 @@ -5557,15 +5628,15 @@ /usr/bin/ctest --force-new-ctest-process -j1 Test project /build/libminc-2.4.03/obj-aarch64-linux-gnu Start 1: ezminc_rw_test - 1/52 Test #1: ezminc_rw_test ................... Passed 0.05 sec + 1/52 Test #1: ezminc_rw_test ................... Passed 0.04 sec Start 2: minc_types-1 - 2/52 Test #2: minc_types-1 ..................... Passed 0.04 sec + 2/52 Test #2: minc_types-1 ..................... Passed 0.03 sec Start 3: minc_types-2 - 3/52 Test #3: minc_types-2 ..................... Passed 0.33 sec + 3/52 Test #3: minc_types-2 ..................... Passed 0.26 sec Start 4: icv_dim1-1 4/52 Test #4: icv_dim1-1 ....................... Passed 0.02 sec Start 5: icv_dim1-2 - 5/52 Test #5: icv_dim1-2 ....................... Passed 0.03 sec + 5/52 Test #5: icv_dim1-2 ....................... Passed 0.04 sec Start 6: icv_dim-1 6/52 Test #6: icv_dim-1 ........................ Passed 0.02 sec Start 7: icv_dim-2 @@ -5573,13 +5644,13 @@ Start 8: icv_fillvalue-1 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.02 sec Start 9: icv_fillvalue-2 - 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.02 sec + 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.03 sec Start 10: icv_range-1 10/52 Test #10: icv_range-1 ...................... Passed 0.03 sec Start 11: icv_range-2 -11/52 Test #11: icv_range-2 ...................... Passed 0.17 sec +11/52 Test #11: icv_range-2 ...................... Passed 0.15 sec Start 12: arg_parse -12/52 Test #12: arg_parse ........................ Passed 0.33 sec +12/52 Test #12: arg_parse ........................ Passed 0.36 sec Start 13: icv 13/52 Test #13: icv .............................. Passed 0.02 sec Start 14: icv_vec @@ -5591,17 +5662,17 @@ Start 17: test_mconv 17/52 Test #17: test_mconv ....................... Passed 0.02 sec Start 18: minc_long_attr_10k -18/52 Test #18: minc_long_attr_10k ............... Passed 0.10 sec +18/52 Test #18: minc_long_attr_10k ............... Passed 0.09 sec Start 19: minc_long_attr_100k -19/52 Test #19: minc_long_attr_100k .............. Passed 0.10 sec +19/52 Test #19: minc_long_attr_100k .............. Passed 0.09 sec Start 20: minc_long_attr_1m 20/52 Test #20: minc_long_attr_1m ................ Passed 0.10 sec Start 21: minc_conversion -21/52 Test #21: minc_conversion .................. Passed 0.12 sec +21/52 Test #21: minc_conversion .................. Passed 0.11 sec Start 22: volume_test-1 -22/52 Test #22: volume_test-1 .................... Passed 3.12 sec +22/52 Test #22: volume_test-1 .................... Passed 3.11 sec Start 23: volume_multidim_test -23/52 Test #23: volume_multidim_test ............. Passed 2.43 sec +23/52 Test #23: volume_multidim_test ............. Passed 2.42 sec Start 24: test_xfm_1 24/52 Test #24: test_xfm_1 ....................... Passed 0.02 sec Start 25: test_xfm_2 @@ -5613,57 +5684,57 @@ Start 28: verify_xfm_1 28/52 Test #28: verify_xfm_1 ..................... Passed 0.03 sec Start 29: verify_xfm_float -29/52 Test #29: verify_xfm_float ................. Passed 0.04 sec +29/52 Test #29: verify_xfm_float ................. Passed 0.02 sec Start 30: verify_xfm_short -30/52 Test #30: verify_xfm_short ................. Passed 0.04 sec +30/52 Test #30: verify_xfm_short ................. Passed 0.03 sec Start 31: verify_xfm_byte -31/52 Test #31: verify_xfm_byte .................. Passed 0.04 sec +31/52 Test #31: verify_xfm_byte .................. Passed 0.03 sec Start 32: verify_xfm_2 32/52 Test #32: verify_xfm_2 ..................... Passed 0.03 sec Start 33: test_arg_parse 33/52 Test #33: test_arg_parse ................... Passed 0.01 sec Start 34: minc2-convert-test -34/52 Test #34: minc2-convert-test ............... Passed 28.35 sec +34/52 Test #34: minc2-convert-test ............... Passed 29.94 sec Start 35: minc2-create-test-images -35/52 Test #35: minc2-create-test-images ......... Passed 0.15 sec +35/52 Test #35: minc2-create-test-images ......... Passed 0.17 sec Start 36: minc2-create-test-images-2 -36/52 Test #36: minc2-create-test-images-2 ....... Passed 0.16 sec +36/52 Test #36: minc2-create-test-images-2 ....... Passed 0.17 sec Start 37: minc2-large-attribute-10k -37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.04 sec +37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.05 sec Start 38: minc2-large-attribute-100k -38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.04 sec +38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.05 sec Start 39: minc2-large-attribute-1m -39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.04 sec +39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.06 sec Start 40: minc2-datatype-test -40/52 Test #40: minc2-datatype-test .............. Passed 5.52 sec +40/52 Test #40: minc2-datatype-test .............. Passed 6.30 sec Start 41: minc2-full-test -41/52 Test #41: minc2-full-test .................. Passed 2.60 sec +41/52 Test #41: minc2-full-test .................. Passed 3.05 sec Start 42: minc2-grpattr-test -42/52 Test #42: minc2-grpattr-test ............... Passed 0.03 sec +42/52 Test #42: minc2-grpattr-test ............... Passed 0.04 sec Start 43: minc2-hyper-test-2 -43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.19 sec +43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.20 sec Start 44: minc2-hyper-test -44/52 Test #44: minc2-hyper-test ................. Passed 0.07 sec +44/52 Test #44: minc2-hyper-test ................. Passed 0.08 sec Start 45: minc2-label-test -45/52 Test #45: minc2-label-test ................. Passed 0.03 sec +45/52 Test #45: minc2-label-test ................. Passed 0.04 sec Start 46: minc2-multires-test -46/52 Test #46: minc2-multires-test .............. Passed 6.90 sec +46/52 Test #46: minc2-multires-test .............. Passed 8.93 sec Start 47: minc2-record-test -47/52 Test #47: minc2-record-test ................ Passed 0.06 sec +47/52 Test #47: minc2-record-test ................ Passed 0.09 sec Start 48: minc2-slice-test -48/52 Test #48: minc2-slice-test ................. Passed 0.04 sec +48/52 Test #48: minc2-slice-test ................. Passed 0.06 sec Start 49: minc2-valid-test -49/52 Test #49: minc2-valid-test ................. Passed 0.04 sec +49/52 Test #49: minc2-valid-test ................. Passed 0.05 sec Start 50: minc2-vector_dimension-test -50/52 Test #50: minc2-vector_dimension-test ...... Passed 1.09 sec +50/52 Test #50: minc2-vector_dimension-test ...... Passed 1.14 sec Start 51: minc2-volprops-test -51/52 Test #51: minc2-volprops-test .............. Passed 0.01 sec +51/52 Test #51: minc2-volprops-test .............. Passed 0.02 sec Start 52: minc2-leak-test -52/52 Test #52: minc2-leak-test .................. Passed 44.91 sec +52/52 Test #52: minc2-leak-test .................. Passed 54.81 sec 100% tests passed, 0 tests failed out of 52 -Total Test time (real) = 97.87 sec +Total Test time (real) = 112.71 sec make[2]: Leaving directory '/build/libminc-2.4.03/obj-aarch64-linux-gnu' make[1]: Leaving directory '/build/libminc-2.4.03' create-stamp debian/debhelper-build-stamp @@ -5758,12 +5829,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/10186/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/10186/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2697 and its subdirectories -I: Current time: Thu Jul 8 12:13:45 -12 2021 -I: pbuilder-time-stamp: 1625789625 +I: removing directory /srv/workspace/pbuilder/10186 and its subdirectories +I: Current time: Thu Aug 11 20:40:50 +14 2022 +I: pbuilder-time-stamp: 1660200050