Diff of the two buildlogs: -- --- b1/build.log 2024-01-07 09:49:21.240972568 +0000 +++ b2/build.log 2024-01-07 09:56:37.494578728 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jan 6 20:52:30 -12 2024 -I: pbuilder-time-stamp: 1704617550 +I: Current time: Sun Feb 9 06:12:29 +14 2025 +I: pbuilder-time-stamp: 1739031149 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./liggghts_3.8.0+repack1-7.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.oP56bHbd/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.YcRwCha7/trustedkeys.kbx': General error gpgv: Signature made Fri Jun 26 21:26:37 2020 gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key @@ -29,49 +29,80 @@ dpkg-source: info: applying 01_add_cmake_files.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/313120/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 8 16:12 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='1685f5a6a1a84e088164af22d0dd3708' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='313120' - PS1='# ' - PS2='> ' + INVOCATION_ID=bec0ad9652244a3abc0e649d580ecf8f + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1367843 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1Ntk6w6V/pbuilderrc_IHxn --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1Ntk6w6V/b1 --logfile b1/build.log liggghts_3.8.0+repack1-7.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1Ntk6w6V/pbuilderrc_jWvw --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1Ntk6w6V/b2 --logfile b2/build.log liggghts_3.8.0+repack1-7.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos1-amd64 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.5.0-0.deb12.4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.5.10-1~bpo12+1 (2023-11-23) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash @@ -131,7 +162,7 @@ -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Dec 7 09:24 sh -> dash + lrwxrwxrwx 1 root root 9 Feb 8 16:12 sh -> /bin/bash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jan 20 2022 su @@ -157,7 +188,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/313120/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -622,7 +653,7 @@ Get: 413 http://deb.debian.org/debian bullseye/main amd64 libxt-dev amd64 1:1.2.0-1 [407 kB] Get: 414 http://deb.debian.org/debian bullseye/main amd64 libvtk6-dev amd64 6.3.0+dfsg2-8.1 [1873 kB] Get: 415 http://deb.debian.org/debian bullseye/main amd64 mpi-default-bin amd64 1.13 [4672 B] -Fetched 253 MB in 1min 59s (2125 kB/s) +Fetched 253 MB in 3s (95.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17743 files and directories currently installed.) @@ -2318,7 +2349,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-7_source.changes +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-7_source.changes dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-7 dpkg-buildpackage: info: source distribution unstable @@ -2459,7 +2494,7 @@ -- Build files have been written to: /build/reproducible-path/liggghts-3.8.0+repack1/debian/build dh_auto_build -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 + cd debian/build && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/reproducible-path/liggghts-3.8.0+repack1/debian/build//CMakeFiles/progress.marks @@ -2491,44 +2526,38 @@ make[3]: Leaving directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_ellipsoid.cpp -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o +[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_line.cpp -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o +[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o +[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp +[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC 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-DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread 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-D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_full.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_line.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp -[ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp -[ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/bond.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/bond.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond.cpp -[ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_tri.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2539,34 +2568,26 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:375:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 375 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp +[ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_tri.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o +[ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" 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/build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:360:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 360 | if (me == 0) fread(&n,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp -[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp -[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/citeme.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 200 | fread(&k[1],sizeof(double),atom->nbondtypes,fp); @@ -2574,6 +2595,20 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 201 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp +[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/citeme.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:360:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 360 | if (me == 0) fread(&n,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o @@ -2598,18 +2633,18 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_contact_atom_gran.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_coord_atom.cpp -[ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_displace_atom.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_erotate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate.cpp +[ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_displace_atom.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_asphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_erotate_asphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_asphere.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_erotate_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_multisphere.cpp +[ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_sphere.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_sphere_atom.cpp -[ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_sphere.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_superquadric.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o @@ -2645,14 +2680,14 @@ [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_local.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rdf.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rigid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rigid.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_slice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_slice.cpp @@ -2686,6 +2721,14 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp +[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp +[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp +[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp +[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2696,14 +2739,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 364 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp -[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp -[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp -[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_euler_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_image.cpp.o @@ -2748,42 +2783,42 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_euler.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp +[ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 848 | ftruncate(fileno(fp),fileend); + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 520 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -[ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 848 | ftruncate(fileno(fp),fileend); - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 670 | ftruncate(fileno(fp),fileend); - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp -[ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_box_relax.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp: In member function 'virtual void LAMMPS_NS::FixAveSpatial::end_of_step()': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 917 | ftruncate(fileno(fp),fileend); - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_impl.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp: In member function 'virtual void LAMMPS_NS::FixAveSpatial::end_of_step()': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 917 | ftruncate(fileno(fp),fileend); + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 670 | ftruncate(fileno(fp),fileend); + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o @@ -2792,6 +2827,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_gran.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp +[ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63: warning: "BIG" redefined 63 | #define BIG 1000000. | @@ -2805,8 +2842,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition 60 | #define BIG 1.0e20 | -[ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o @@ -2819,8 +2854,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform_check.cpp -[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_diam_max.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor 'LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:40: warning: 'Source' directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 75 | sprintf(sourceName_, "%sSource",speciesName_); @@ -2906,6 +2939,8 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_diam_max.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_drag.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_drag.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_drag.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_dt_reset.cpp.o @@ -2990,10 +3025,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_particledistribution_discrete.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_planeforce.cpp -[ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_atom.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_print.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_print.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_print.cpp +[ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_atom.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_atom_region_tracer.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o @@ -3022,10 +3057,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph_density_corr.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph_density_summation.cpp -[ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_spring.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_spring.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_pressure.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_sph_pressure.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph_pressure.cpp +[ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_spring.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_spring.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring_rg.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_spring_rg.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_spring_rg.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring_self.cpp.o @@ -3040,15 +3075,15 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_template_multiplespheres.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_template_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_template_multisphere.cpp +[ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_superquadric.cpp.o [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_sphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_template_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_template_sphere.cpp -[ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_template_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_template_superquadric.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_template_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_template_sphere.cpp [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_viscous.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_viscous.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_viscous.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall.cpp.o -[ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_wall.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_wall.cpp +[ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_wall_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_wall_gran.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_region.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_wall_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_wall_region.cpp @@ -3080,26 +3115,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 349 | if (me == 0) fread(&n,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 352 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp -[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp -[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lammps.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/lammps.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:569:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 569 | if (me == 0) fread(&ngroup,sizeof(int),1,fp); @@ -3110,12 +3127,22 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:585:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 585 | if (me == 0) fread(names[i],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/lattice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lattice.cpp -[ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/library.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/library.cpp -[ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/library_cfd_coupling.cpp +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp +[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 349 | if (me == 0) fread(&n,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 352 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp: In member function 'void LAMMPS_NS::Input::shell()': /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1124 | chdir(arg[1]); @@ -3123,10 +3150,18 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1170 | if (me == 0) system(work); | ~~~~~~^~~~~~ -[ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/math_extra.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/math_extra.cpp +[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lammps.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/lammps.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp +[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/lattice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lattice.cpp +[ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/library.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/library.cpp +[ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/library_cfd_coupling.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o +[ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/math_extra_liggghts_nonspherical.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/math_extra.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/math_extra.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/math_extra_liggghts_superquadric.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/memory.cpp.o @@ -3137,8 +3172,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_liquidtransfer.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress.cpp -[ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_mover_rotation.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o @@ -3157,6 +3190,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition 60 | #define BIG 1.0e20 | +[ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_mover_rotation.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/min.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/min.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/min.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_cg.cpp.o @@ -3173,6 +3208,35 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modify_liggghts.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere.cpp +[ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere_parallel.cpp +[ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_bond.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_bond.cpp +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_derive.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_derive.cpp +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_dummy.cpp +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_full.cpp +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_gran.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_multi.cpp +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_nsq.cpp +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 80 | posix_memalign(&ptr, alignment, sizeof(T)); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] +[ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_list.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_list.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1197 | if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); @@ -3213,35 +3277,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1264 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ -[ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere_parallel.cpp -[ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_bond.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_derive.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_full.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_dummy.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_gran.cpp -[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp -[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_nsq.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_multi.cpp -[ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_list.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_list.cpp -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 80 | posix_memalign(&ptr, alignment, sizeof(T)); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_request.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_request.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o @@ -3258,15 +3293,11 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp +[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_line_lj.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp @@ -3274,14 +3305,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:660:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 660 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3292,25 +3315,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:677:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 677 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 99 | fread(&selected, sizeof(int64_t), 1, fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 300 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart_settings(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 322 | fread(&artVisc_flag,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 323 | fread(&tensCorr_flag,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/property_registry.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 282 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); @@ -3328,6 +3332,37 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | fread(&mix_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 300 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart_settings(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 322 | fread(&artVisc_flag,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 323 | fread(&tensCorr_flag,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 99 | fread(&selected, sizeof(int64_t), 1, fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/property_registry.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/random.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/random.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_mars.cpp.o @@ -3429,11 +3464,11 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:89:14: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 89 | write(STDOUT_FILENO, warning.c_str(), len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function 'void LAMMPS_NS::SignalHandler::usr1_handler(int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:108:10: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 108 | write(STDOUT_FILENO, warning.c_str(), len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/superquadric.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tet_mesh.cpp @@ -3450,8 +3485,8 @@ [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/update.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/update.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/update.cpp [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/variable.cpp.o -[ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/velocity.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/variable.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/variable.cpp +[ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/velocity.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/velocity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/velocity.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/verlet.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/verlet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/verlet.cpp @@ -3495,14 +3530,14 @@ mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; mpirun -np 2 --allow-run-as-root --oversubscribe /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-07-09:03:50 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-08-16:13:34 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 2 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Sun Jan 7 09:34:45 2024 +Setting up run at Sat Feb 8 16:17:18 2025 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -3512,36 +3547,36 @@ insertion: proc 1 at 0 % insertion: proc 1 at 10 % insertion: proc 1 at 20 % -insertion: proc 1 at 30 % -insertion: proc 1 at 40 % -insertion: proc 1 at 50 % insertion: proc 0 at 0 % insertion: proc 0 at 10 % insertion: proc 0 at 20 % insertion: proc 0 at 30 % insertion: proc 0 at 40 % +insertion: proc 1 at 30 % +insertion: proc 1 at 40 % insertion: proc 0 at 50 % +insertion: proc 1 at 50 % insertion: proc 0 at 60 % -insertion: proc 0 at 70 % -insertion: proc 0 at 80 % -insertion: proc 0 at 90 % insertion: proc 1 at 60 % insertion: proc 1 at 70 % -insertion: proc 0 at 100 % +insertion: proc 0 at 70 % insertion: proc 1 at 80 % +insertion: proc 0 at 80 % insertion: proc 1 at 90 % +insertion: proc 0 at 90 % insertion: proc 1 at 100 % +insertion: proc 0 at 100 % INFO: Particle insertion ins: inserted 889 particle templates (mass 1.906603e+00) at step 1 - a total of 889 particle templates (mass 1.906603e+00) inserted so far. 1 889 0.0858673 0 5719.8098 0.0015 -Loop time of 0.259402 on 2 procs for 1 steps with 889 atoms, finish time Sun Jan 7 09:34:46 2024 +Loop time of 0.0182658 on 2 procs for 1 steps with 889 atoms, finish time Sat Feb 8 16:17:18 2025 -Pair time (%) = 0.000139397 (0.0537378) -Neigh time (%) = 0.0045209 (1.74282) -Comm time (%) = 0.0212452 (8.19008) -Outpt time (%) = 0.000285172 (0.109934) -Other time (%) = 0.233211 (89.9034) +Pair time (%) = 3.20805e-05 (0.175631) +Neigh time (%) = 0.000587749 (3.21775) +Comm time (%) = 0.000217088 (1.18849) +Outpt time (%) = 3.85685e-05 (0.211151) +Other time (%) = 0.0173903 (95.207) Nlocal: 444.5 ave 446 max 443 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3554,7 +3589,7 @@ Ave neighs/atom = 1.52418 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Sun Jan 7 09:34:46 2024 +Setting up run at Sat Feb 8 16:17:18 2025 Memory usage per processor = 8.42521 Mbytes Step Atoms KinEng rke heattran Volume @@ -3579,14 +3614,14 @@ 18000 889 1.9134527e-05 9.6788056e-06 5719.8098 0.0015 19000 889 4.4217855e-06 3.7107113e-06 5719.8098 0.0015 20000 889 2.3496863e-06 2.5381488e-06 5719.8098 0.0015 -Loop time of 68.4669 on 2 procs for 19999 steps with 889 atoms, finish time Sun Jan 7 09:35:54 2024 +Loop time of 15.887 on 2 procs for 19999 steps with 889 atoms, finish time Sat Feb 8 16:17:34 2025 -Pair time (%) = 10.5087 (15.3486) -Neigh time (%) = 0.29913 (0.436898) -Comm time (%) = 23.8155 (34.784) -Outpt time (%) = 0.449158 (0.656022) -Other time (%) = 33.3944 (48.7745) +Pair time (%) = 4.86148 (30.6004) +Neigh time (%) = 0.0888463 (0.559239) +Comm time (%) = 1.35866 (8.55201) +Outpt time (%) = 0.178644 (1.12446) +Other time (%) = 9.39938 (59.1639) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3601,7 +3636,7 @@ Dangerous builds = 0 Setting atom values ... 440 settings made for property/atom -Setting up run at Sun Jan 7 09:35:54 2024 +Setting up run at Sat Feb 8 16:17:34 2025 Memory usage per processor = 8.72219 Mbytes Step Atoms KinEng rke heattran Volume @@ -3636,14 +3671,14 @@ 48000 889 4.1028794e-09 1.8257014e-08 10438.063 0.0015 49000 889 4.1101685e-09 1.8256258e-08 10438.063 0.0015 50000 889 2.8053107e-09 1.4643392e-08 10438.063 0.0015 -Loop time of 76.417 on 2 procs for 30000 steps with 889 atoms, finish time Sun Jan 7 09:37:11 2024 +Loop time of 28.5605 on 2 procs for 30000 steps with 889 atoms, finish time Sat Feb 8 16:18:03 2025 -Pair time (%) = 18.1755 (23.7847) -Neigh time (%) = 0.00138146 (0.00180779) -Comm time (%) = 0.252746 (0.330746) -Outpt time (%) = 0.665521 (0.870907) -Other time (%) = 57.3218 (75.0119) +Pair time (%) = 8.91839 (31.2263) +Neigh time (%) = 0.00108765 (0.00380823) +Comm time (%) = 0.0208244 (0.0729132) +Outpt time (%) = 0.283176 (0.991497) +Other time (%) = 19.337 (67.7054) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3660,14 +3695,14 @@ mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-07-09:03:50 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-08-16:13:34 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 1 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Sun Jan 7 09:37:14 2024 +Setting up run at Sat Feb 8 16:18:03 2025 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -3687,14 +3722,14 @@ INFO: Particle insertion ins: inserted 890 particle templates (mass 1.908748e+00) at step 1 - a total of 890 particle templates (mass 1.908748e+00) inserted so far. 1 890 0.085963889 0 5726.2438 0.0015 -Loop time of 0.0492571 on 1 procs for 1 steps with 890 atoms, finish time Sun Jan 7 09:37:14 2024 +Loop time of 0.0196475 on 1 procs for 1 steps with 890 atoms, finish time Sat Feb 8 16:18:03 2025 -Pair time (%) = 7.2464e-05 (0.147114) -Neigh time (%) = 0.00117412 (2.38365) -Comm time (%) = 1.5318e-05 (0.031098) -Outpt time (%) = 4.6685e-05 (0.0947781) -Other time (%) = 0.0479486 (97.3434) +Pair time (%) = 5.9838e-05 (0.304558) +Neigh time (%) = 0.000878296 (4.47027) +Comm time (%) = 0.000135022 (0.687222) +Outpt time (%) = 3.2367e-05 (0.164739) +Other time (%) = 0.018542 (94.3732) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3707,7 +3742,7 @@ Ave neighs/atom = 1.54719 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Sun Jan 7 09:37:14 2024 +Setting up run at Sat Feb 8 16:18:03 2025 Memory usage per processor = 8.46413 Mbytes Step Atoms KinEng rke heattran Volume @@ -3732,14 +3767,14 @@ 18000 890 1.4676598e-05 7.0850812e-06 5726.2438 0.0015 19000 890 3.7770954e-06 4.6853468e-06 5726.2438 0.0015 20000 890 5.3031725e-07 1.3357401e-06 5726.2438 0.0015 -Loop time of 135.844 on 1 procs for 19999 steps with 890 atoms, finish time Sun Jan 7 09:39:30 2024 +Loop time of 15.2892 on 1 procs for 19999 steps with 890 atoms, finish time Sat Feb 8 16:18:19 2025 -Pair time (%) = 83.0471 (61.1341) -Neigh time (%) = 1.93573 (1.42497) -Comm time (%) = 0.171558 (0.12629) -Outpt time (%) = 2.39348 (1.76193) -Other time (%) = 48.2963 (35.5527) +Pair time (%) = 9.21252 (60.2552) +Neigh time (%) = 0.14961 (0.978537) +Comm time (%) = 0.0120773 (0.0789925) +Outpt time (%) = 0.2106 (1.37744) +Other time (%) = 5.70437 (37.3099) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3754,7 +3789,7 @@ Dangerous builds = 0 Setting atom values ... 445 settings made for property/atom -Setting up run at Sun Jan 7 09:39:30 2024 +Setting up run at Sat Feb 8 16:18:19 2025 Memory usage per processor = 8.75284 Mbytes Step Atoms KinEng rke heattran Volume @@ -3789,14 +3824,14 @@ 48000 890 9.0915381e-09 2.6785102e-08 10498.114 0.0015 49000 890 8.3490816e-10 2.0441102e-08 10498.114 0.0015 50000 890 5.7112432e-09 2.069405e-08 10498.114 0.0015 -Loop time of 177.885 on 1 procs for 30000 steps with 890 atoms, finish time Sun Jan 7 09:42:27 2024 +Loop time of 26.9719 on 1 procs for 30000 steps with 890 atoms, finish time Sat Feb 8 16:18:46 2025 -Pair time (%) = 114.51 (64.3732) -Neigh time (%) = 0.0168649 (0.0094808) -Comm time (%) = 0.173703 (0.0976487) -Outpt time (%) = 2.69646 (1.51585) -Other time (%) = 60.4877 (34.0038) +Pair time (%) = 16.6565 (61.755) +Neigh time (%) = 0.00097732 (0.00362347) +Comm time (%) = 0.0115534 (0.042835) +Outpt time (%) = 0.321072 (1.19039) +Other time (%) = 9.98181 (37.0081) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3815,7 +3850,7 @@ dh_testroot -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_prep -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_auto_install -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j15 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd debian/build && make -j16 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/reproducible-path/liggghts-3.8.0+repack1/debian/build//CMakeFiles/progress.marks @@ -4348,12 +4383,12 @@ dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_builddeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-7_amd64.deb'. dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-7_amd64.deb'. +dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-7_amd64.deb'. dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-7_amd64.deb'. dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-7_amd64.deb'. -dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-7_all.deb'. dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-7_amd64.deb'. +dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-7_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../liggghts_3.8.0+repack1-7_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -4361,12 +4396,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1367843/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/313120 and its subdirectories -I: Current time: Sat Jan 6 21:49:19 -12 2024 -I: pbuilder-time-stamp: 1704620959 +I: removing directory /srv/workspace/pbuilder/1367843 and its subdirectories +I: Current time: Sun Feb 9 06:19:40 +14 2025 +I: pbuilder-time-stamp: 1739031580