Diff of the two buildlogs: -- --- b1/build.log 2021-12-27 14:47:17.311181907 +0000 +++ b2/build.log 2021-12-27 16:10:31.199066271 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Dec 27 01:55:41 -12 2021 -I: pbuilder-time-stamp: 1640613341 +I: Current time: Mon Jan 30 11:10:32 +14 2023 +I: pbuilder-time-stamp: 1675026632 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./dolfin_2019.2.0~git20201207.b495043-5.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig._4vwYjci/trustedkeys.kbx': General error -gpgv: Signature made Wed Jun 9 00:53:12 2021 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.WVscGKMS/trustedkeys.kbx': General error +gpgv: Signature made Thu Jun 10 02:53:12 2021 +14 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./dolfin_2019.2.0~git20201207.b495043-5.dsc @@ -38,135 +38,169 @@ dpkg-source: info: applying test_relax_tolerance.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4132282/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/177655/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/177655/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/177655/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='e9bf52440b1342c1b5a92f688eef6996' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4132282' - PS1='# ' - PS2='> ' + INVOCATION_ID=13696f26ec7b488784194f8a0b816a22 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=177655 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.826gSVDY3D/pbuilderrc_7Kbr --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.826gSVDY3D/b1 --logfile b1/build.log dolfin_2019.2.0~git20201207.b495043-5.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.826gSVDY3D/pbuilderrc_czvc --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.826gSVDY3D/b2 --logfile b2/build.log dolfin_2019.2.0~git20201207.b495043-5.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos1-amd64 5.10.0-10-amd64 #1 SMP Debian 5.10.84-1 (2021-12-08) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Aug 4 08:25 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Jul 28 07:09 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 69032 Jul 28 07:09 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe - -rwxr-xr-x 1 root root 98048 Mar 2 2021 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Jul 28 07:09 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Jul 28 07:09 more - -rwsr-xr-x 1 root root 55528 Jul 28 07:09 mount - -rwxr-xr-x 1 root root 18664 Jul 28 07:09 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Dec 20 21:25 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Jul 28 07:09 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Jul 28 07:09 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Jul 28 07:09 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless - -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew -I: user script /srv/workspace/pbuilder/4132282/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Aug 5 2021 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Jul 29 2021 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 69032 Jul 29 2021 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe + -rwxr-xr-x 1 root root 98048 Mar 3 2021 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Jul 29 2021 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Jul 29 2021 more + -rwsr-xr-x 1 root root 55528 Jul 29 2021 mount + -rwxr-xr-x 1 root root 18664 Jul 29 2021 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Aug 5 2021 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jan 30 11:11 sh -> bash + lrwxrwxrwx 1 root root 4 Jan 24 05:47 sh.distrib -> dash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Jul 29 2021 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Jul 29 2021 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Jul 29 2021 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless + -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew +I: user script /srv/workspace/pbuilder/177655/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -662,7 +696,7 @@ Get: 364 http://deb.debian.org/debian bullseye/main amd64 python3-sphinx-rtd-theme all 0.5.1+dfsg-1 [20.9 kB] Get: 365 http://deb.debian.org/debian bullseye/main amd64 slepc-dev all 3.14.2+dfsg1-1 [19.9 kB] Get: 366 http://deb.debian.org/debian bullseye/main amd64 slepc64-dev all 3.14.2+dfsg1-1 [17.5 kB] -Fetched 264 MB in 5s (51.0 MB/s) +Fetched 264 MB in 14s (18.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) @@ -2209,7 +2243,8 @@ fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/dolfin-2019.2.0~git20201207.b495043/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dolfin_2019.2.0~git20201207.b495043-5_source.changes +hostname: Name or service not known +I: Running cd /build/dolfin-2019.2.0~git20201207.b495043/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dolfin_2019.2.0~git20201207.b495043-5_source.changes dpkg-buildpackage: info: source package dolfin dpkg-buildpackage: info: source version 2019.2.0~git20201207.b495043-5 dpkg-buildpackage: info: source distribution unstable @@ -4854,7 +4889,7 @@ make[1]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043' py3versions: no X-Python3-Version in control file, using supported versions PETSC_DIR=/usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real dh_auto_build --builddir=obj-x86_64-linux-gnu - cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' /usr/bin/cmake -S"/build/dolfin-2019.2.0~git20201207.b495043" -B"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu//CMakeFiles/progress.marks" @@ -4886,31 +4921,31 @@ make[4]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[4]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp" [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/adapt.cpp" +[ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp" +[ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" 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"/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/GenericAdaptiveVariationalSolver.cpp" -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. 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-DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/marking.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/TimeSeries.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/ALE.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/ALE.cpp" -[ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/HarmonicSmoothing.cpp" [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/HarmonicSmoothing.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/MeshDisplacement.cpp" [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -DDOLFIN_GIT_COMMIT_HASH=\"unknown\" -DUFC_SIGNATURE=\"411b4c5905b07ea84079bbe90b13639837005335\" -o CMakeFiles/dolfin.dir/common/defines.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/common/defines.cpp" @@ -5062,18 +5097,18 @@ cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/IntersectionConstruction.cpp" [ 38%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/MeshPointIntersection.cpp" -[ 38%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/predicates.cpp" [ 38%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/Point.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/Point.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/Point.cpp" +[ 38%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/predicates.cpp" [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/SimplexQuadrature.cpp" [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/graph/BoostGraphOrdering.cpp" +[ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/graph/GraphBuilder.cpp" [ 41%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -[ 41%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/graph/GraphColoring.cpp" -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/graph/GraphBuilder.cpp" [ 41%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/graph/ParMETIS.cpp" [ 41%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o @@ -5352,7 +5387,7 @@ /usr/bin/cmake -E cmake_progress_start "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles" 0 make[2]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' PETSC_DIR=/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real dh_auto_build --builddir=obj-x86_64-linux-gnu-64 - cd obj-x86_64-linux-gnu-64 && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu-64 && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' /usr/bin/cmake -S"/build/dolfin-2019.2.0~git20201207.b495043" -B"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/CMakeFiles" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64//CMakeFiles/progress.marks" @@ -5367,12 +5402,12 @@ make[4]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[4]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 0%] Compiling form Poisson3D.ufl [ 0%] Compiling form Poisson1D.ufl -[ 0%] Compiling form Poisson2D.ufl cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin/ale" && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 /build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/Poisson1D.ufl -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin/ale" && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 /build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/Poisson3D.ufl +[ 0%] Compiling form Poisson2D.ufl cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin/ale" && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 /build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/Poisson2D.ufl +[ 0%] Compiling form Poisson3D.ufl +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin/ale" && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 /build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/Poisson3D.ufl make[4]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 0%] Built target compile_ale_forms make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend @@ -5386,35 +5421,35 @@ make[4]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/adapt.cpp" -[ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -[ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -[ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o -[ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o -[ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/adapt.cpp" +[ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp" -[ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/ErrorControl.cpp" -[ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -[ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/ALE.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC 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-fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/adaptivity/GenericAdaptiveVariationalSolver.cpp" -[ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o +[ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem 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CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. 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4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/HarmonicSmoothing.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/ale/MeshDisplacement.cpp" +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -DDOLFIN_GIT_COMMIT_HASH=\"unknown\" -DUFC_SIGNATURE=\"411b4c5905b07ea84079bbe90b13639837005335\" -o CMakeFiles/dolfin.dir/common/defines.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/common/defines.cpp" [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/MPI.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/init.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/common/init.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/MPI.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/common/MPI.cpp" [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/common/SubSystemsManager.cpp" @@ -5504,10 +5539,10 @@ cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Constant.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/function/Constant.cpp" [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Expression.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Expression.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/function/Expression.cpp" +[ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/function/FunctionAssigner.cpp" [ 27%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/function/FunctionAXPY.cpp" -[ 27%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/function/FunctionAssigner.cpp" [ 27%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Function.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Function.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/function/Function.cpp" [ 27%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o @@ -5565,8 +5600,8 @@ [ 38%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/predicates.cpp" [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -[ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/geometry/SimplexQuadrature.cpp" +[ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/graph/BoostGraphOrdering.cpp" [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/graph/GraphBuilder.cpp" @@ -5770,10 +5805,10 @@ cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/mesh/MeshFunction.cpp" [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/mesh/MeshGeometry.cpp" -[ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/mesh/MeshHierarchy.cpp" [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/mesh/MeshOrdering.cpp" +[ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/mesh/MeshHierarchy.cpp" [ 86%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/dolfin" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/dolfin/mesh/MeshPartitioning.cpp" [ 86%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o @@ -5858,8 +5893,8 @@ *) set -e; \ cp -ra obj-x86_64-linux-gnu installation-build; \ cd obj-x86_64-linux-gnu; \ - make -j15 unittests VERBOSE=1; \ - make -j15 demos VERBOSE=1; \ + make -j16 unittests VERBOSE=1; \ + make -j16 demos VERBOSE=1; \ case " i386 mipsel ppc64el ia64 " in \ *\ amd64\ *) IGNORE_MPI_TESTS="demo_hyperelasticity_mpi demo_elastodynamics_mpi demo_cahn-hilliard_mpi demo_navier-stokes_mpi demo_elasticity_mpi ";; \ *) IGNORE_MPI_TESTS="demo_hyperelasticity_mpi demo_elastodynamics_mpi ";; \ @@ -5868,11 +5903,11 @@ echo "Run C++ unit tests (serial)"; \ LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -R unittests; \ echo "Run C++ regressions tests (serial)"; \ - LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j15 -R demo -R serial; \ + LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j16 -R demo -R serial; \ echo "Run C++ regression tests (MPI)"; \ case " armel armhf i386 hppa m68k powerpc " in \ *\ amd64\ *) echo "MPI tests have been disabled on amd64";; \ - *) LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j5 -R demo -R mpi;; \ + *) LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j6 -R demo -R mpi;; \ esac; \ cd ..; \ mv obj-x86_64-linux-gnu build-tests; \ @@ -5916,24 +5951,24 @@ [ 92%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/main.cpp" [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/common/SubSystemsManager.cpp" [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/function/Expression.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/common/SubSystemsManager.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/function/Expression.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/function/Expression.cpp" [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/ConvexTriangulation.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/geometry/ConvexTriangulation.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/geometry/ConvexTriangulation.cpp" [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/IntersectionConstruction.cpp.o -[ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshData.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/geometry/IntersectionConstruction.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/geometry/IntersectionConstruction.cpp" -[ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshValueCollection.cpp.o +[ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshData.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/io/XMLMeshData.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/io/XMLMeshData.cpp" +[ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshValueCollection.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/io/XMLMeshValueCollection.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/io/XMLMeshValueCollection.cpp" [ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/la/LinearOperator.cpp.o -[ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/la/Vector.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/la/LinearOperator.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/la/LinearOperator.cpp" +[ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/la/Vector.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/la/Vector.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/la/Vector.cpp" [ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/Mesh.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/mesh/Mesh.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/mesh/Mesh.cpp" [ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/MeshColoring.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/mesh/Mesh.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/mesh/Mesh.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/mesh/MeshColoring.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/mesh/MeshColoring.cpp" [ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/MeshFunction.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/mesh/MeshFunction.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/mesh/MeshFunction.cpp" @@ -5961,9 +5996,9 @@ make -f CMakeFiles/Makefile2 CMakeFiles/demos.dir/all make[4]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f CMakeFiles/demos_source.dir/build.make CMakeFiles/demos_source.dir/depend +make -f CMakeFiles/copy_data_test_demo.dir/build.make CMakeFiles/copy_data_test_demo.dir/depend make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/demos_source.dir/DependInfo.cmake" --color= -make -f CMakeFiles/copy_data_test_demo.dir/build.make CMakeFiles/copy_data_test_demo.dir/depend make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/copy_data_test_demo.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/demos_source.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/demos_source.dir/depend.internal". @@ -5971,13 +6006,13 @@ Scanning dependencies of target demos_source make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f CMakeFiles/demos_source.dir/build.make CMakeFiles/demos_source.dir/build -make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make[5]: Nothing to be done for 'CMakeFiles/demos_source.dir/build'. -make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/copy_data_test_demo.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/copy_data_test_demo.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles/copy_data_test_demo.dir/depend.internal". Scanning dependencies of target copy_data_test_demo make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make[5]: Nothing to be done for 'CMakeFiles/demos_source.dir/build'. +make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f CMakeFiles/copy_data_test_demo.dir/build.make CMakeFiles/copy_data_test_demo.dir/build make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' /usr/bin/python3 -B -u /build/dolfin-2019.2.0~git20201207.b495043/cmake/scripts/copy-test-demo-data.py /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu @@ -6024,164 +6059,175 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/bcs/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/DependInfo.cmake" --color= make -f demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build.make demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/depend +make -f demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build.make demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/biharmonic/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake" --color= -make -f demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build.make demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/depend.internal". -Dependee 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/DependInfo.cmake" --color= make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/DependInfo.cmake" --color= make -f 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"/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/eigenvalue/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/DependInfo.cmake" --color= make -f demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build.make demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/depend.internal". -Dependee 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/hyperelasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake" --color= make -f demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/build.make 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Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/built-in-meshes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/depend.internal". -make -f demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/build.make demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/DependInfo.cmake" --color= make -f demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/build.make demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/depend.internal". +Dependee 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/neumann-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/DependInfo.cmake" --color= make -f demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build.make demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/nonlinear-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/DependInfo.cmake" --color= make -f demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build.make demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend.internal". +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" 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Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/navier-stokes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/depend.internal". -make -f demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/build.make demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/periodic/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/periodic/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/DependInfo.cmake" --color= make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/DependInfo.cmake" --color= -Scanning dependencies of target demo_auto-adaptive-poisson make -f demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/build.make demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/depend -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/singular-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/DependInfo.cmake" --color= -make -f demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/build.make demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/build -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/singular-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/DependInfo.cmake" --color= +make -f demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build.make demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/depend.internal". 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demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build Scanning dependencies of target demo_eigenvalue +make -f demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build.make demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build.make demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -Scanning dependencies of target demo_built-in-meshes +Scanning dependencies of target demo_neumann-poisson make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +Scanning dependencies of target demo_bcs +make -f demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/build.make demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/build make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build.make demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build +Scanning dependencies of target demo_periodic make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build.make demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build [ 68%] Building CXX object demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/main.cpp.o -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -Scanning dependencies of target demo_mixed-poisson -cd 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"/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/auto-adaptive-poisson/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/build.make demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 68%] Building CXX object demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem 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/usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/biharmonic/cpp/main.cpp" make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build -Scanning dependencies of target demo_neumann-poisson +make -f demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build.make demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD 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directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/built-in-meshes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_built-in-meshes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/built-in-meshes/cpp/main.cpp" +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/build.make demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/build -[ 70%] Building CXX object demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/main.cpp.o -make -f demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/build.make demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/build +make -f demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/build.make demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/build +[ 69%] Building CXX object demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_eigenvalue.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/eigenvalue/cpp/main.cpp" make[8]: Entering 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/usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_bcs.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/bcs/cpp/main.cpp" +make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 70%] Building CXX object demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/built-in-meshes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" 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'/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 70%] Building CXX object demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/nonlinear-poisson/cpp/main.cpp" +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +Scanning dependencies of target demo_nonmatching-interpolation Scanning dependencies of target demo_hyperelasticity -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/CahnHilliard2D.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 70%] Building CXX object demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/main.cpp.o +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +Scanning dependencies of target demo_stokes-iterative +make -f demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build.make demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build.make demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build [ 71%] Building CXX object demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/main.cpp.o -make -f demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/build.make demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/build -[ 71%] Building CXX object demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/main.cpp.o +Scanning dependencies of target demo_singular-poisson +[ 72%] Building CXX object demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/main.cpp.o make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/mixed-poisson/cpp" && /usr/bin/c++ 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/usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_navier-stokes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/navier-stokes/cpp/main.cpp" -make -f demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build.make demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build +Scanning dependencies of target demo_poisson make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build.make demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/periodic/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD 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-Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/mixed-poisson/cpp/main.cpp" +make -f demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/build.make demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/build +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/CahnHilliard2D.cpp" make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -Scanning dependencies of target demo_periodic -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/build.make demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/build -Scanning dependencies of target demo_nonmatching-interpolation make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 71%] Building CXX object demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/main.cpp.o -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/poisson/cpp/main.cpp" -make -f demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build.make demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build -[ 71%] Building CXX object demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_singular-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/singular-poisson/cpp/main.cpp" +[ 73%] Building CXX object demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 72%] Building CXX object demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/hyperelasticity/cpp/main.cpp" -[ 72%] Building CXX object demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/nonlinear-poisson/cpp/main.cpp" -[ 73%] Building CXX object demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/periodic/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_periodic.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/periodic/cpp/main.cpp" -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 73%] Building CXX object demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/main.cpp.o [ 73%] Building CXX object demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/poisson/cpp/main.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonmatching-interpolation/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/nonmatching-interpolation/cpp/main.cpp" +[ 73%] Building CXX object demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" 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-I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-iterative/cpp/main.cpp" [ 73%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/CahnHilliard3D.cpp" [ 73%] Linking CXX executable demo_built-in-meshes @@ -6189,22 +6235,6 @@ /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_built-in-meshes.dir/main.cpp.o -o demo_built-in-meshes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 73%] Built target demo_built-in-meshes -make -f demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build.make demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-iterative/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend.internal". -Scanning dependencies of target demo_stokes-iterative -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build.make demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 73%] Building CXX object demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-iterative/cpp/main.cpp" -[ 74%] Linking CXX executable demo_neumann-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_neumann-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_neumann-poisson.dir/main.cpp.o -o demo_neumann-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 74%] Built target demo_neumann-poisson make -f demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/build.make demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-taylor-hood/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-taylor-hood/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/DependInfo.cmake" --color= @@ -6214,175 +6244,173 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/build.make demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 75%] Building CXX object demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o +[ 74%] Building CXX object demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-taylor-hood/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-taylor-hood/cpp/main.cpp" -[ 75%] Linking CXX executable demo_singular-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_singular-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_neumann-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson.dir/main.cpp.o -o demo_poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 76%] Linking CXX executable demo_nonlinear-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonlinear-poisson.dir/link.txt --verbose=1 -[ 77%] Linking CXX executable demo_nonmatching-interpolation -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonmatching-interpolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-interpolation.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -o demo_nonlinear-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o -o demo_nonmatching-interpolation ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 77%] Linking CXX executable demo_eigenvalue -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_eigenvalue.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_eigenvalue.dir/main.cpp.o -o demo_eigenvalue ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_neumann-poisson.dir/main.cpp.o -o demo_neumann-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 77%] Built target demo_singular-poisson +[ 76%] Built target demo_neumann-poisson make -f demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build.make demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/subdomains/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/DependInfo.cmake" --color= -[ 77%] Built target demo_poisson -make -f demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build.make demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". +Scanning dependencies of target demo_subdomains +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build.make demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 76%] Built target demo_poisson +[ 76%] Building CXX object demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_subdomains.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/subdomains/cpp/main.cpp" +make -f demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build.make demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/DependInfo.cmake" --color= -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". -[ 77%] Built target demo_nonmatching-interpolation -make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend.internal". +Scanning dependencies of target demo_advection-diffusion +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build.make demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 77%] Building CXX object demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/advection-diffusion/cpp/main.cpp" +[ 77%] Linking CXX executable demo_periodic +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/periodic/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_periodic.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_periodic.dir/main.cpp.o -o demo_periodic ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 77%] Linking CXX executable demo_nonlinear-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonlinear-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -o demo_nonlinear-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 77%] Built target demo_periodic +make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/ale/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend.internal". +Scanning dependencies of target demo_ale +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 77%] Building CXX object demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_ale.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/ale/cpp/main.cpp" +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 77%] Built target demo_nonlinear-poisson make -f demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/build.make demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/auto-adaptive-navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/DependInfo.cmake" --color= -Scanning dependencies of target demo_subdomains -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build.make demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build -Scanning dependencies of target demo_advection-diffusion -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build.make demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/depend.internal". -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 77%] Building CXX object demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" 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-I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/advection-diffusion/cpp/main.cpp" -Scanning dependencies of target demo_ale -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 78%] Linking CXX executable demo_bcs -make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_bcs.dir/link.txt --verbose=1 -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_bcs.dir/main.cpp.o -o demo_bcs ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 77%] Linking CXX executable demo_eigenvalue +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/eigenvalue/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_eigenvalue.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_eigenvalue.dir/main.cpp.o -o demo_eigenvalue ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Scanning dependencies of target demo_auto-adaptive-navier-stokes make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/build.make demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Building CXX object demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -[ 80%] Building CXX object demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/main.cpp.o +[ 78%] Building CXX object demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/auto-adaptive-navier-stokes/cpp/main.cpp" -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_ale.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/ale/cpp/main.cpp" +[ 78%] Linking CXX executable demo_singular-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_singular-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_singular-poisson.dir/main.cpp.o -o demo_singular-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 78%] Linking CXX executable demo_bcs +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/bcs/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_bcs.dir/link.txt --verbose=1 +[ 78%] Linking CXX executable demo_mixed-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/mixed-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_mixed-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_bcs.dir/main.cpp.o -o demo_bcs ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -o demo_mixed-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Built target demo_eigenvalue +[ 78%] Built target demo_eigenvalue make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/block-matrix/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend.internal". -Scanning dependencies of target demo_block-matrix -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Building CXX object demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_block-matrix.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/block-matrix/cpp/main.cpp" -[ 80%] Linking CXX executable demo_periodic -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/periodic/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_periodic.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_periodic.dir/main.cpp.o -o demo_periodic ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Built target demo_bcs +[ 78%] Built target demo_singular-poisson make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend +[ 80%] Linking CXX executable demo_nonmatching-interpolation +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/nonmatching-interpolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-interpolation.dir/link.txt --verbose=1 make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/conditional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/DependInfo.cmake" --color= +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o -o demo_nonmatching-interpolation ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend.internal". -Scanning dependencies of target demo_conditional +Scanning dependencies of target demo_block-matrix make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build +make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build +[ 81%] Linking CXX executable demo_biharmonic make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Building CXX object demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_conditional.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/conditional/cpp/main.cpp" +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 +[ 81%] Building CXX object demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_block-matrix.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/block-matrix/cpp/main.cpp" +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_biharmonic.dir/main.cpp.o -o demo_biharmonic ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Linking CXX executable demo_mixed-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/mixed-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_mixed-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -o demo_mixed-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 80%] Built target demo_periodic +[ 81%] Built target demo_bcs make -f demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/build.make demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-snes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/DependInfo.cmake" --color= +Scanning dependencies of target demo_conditional Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/depend.internal". +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 81%] Building CXX object demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_conditional.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/conditional/cpp/main.cpp" Scanning dependencies of target demo_contact-vi-snes make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/build.make demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Building CXX object demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o +[ 81%] Building CXX object demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-snes/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Built target demo_mixed-poisson +[ 81%] Built target demo_nonmatching-interpolation make -f demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build.make demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-tao/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/depend.internal". -Scanning dependencies of target demo_contact-vi-tao make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build.make demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 80%] Building CXX object demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-tao/cpp/main.cpp" -[ 80%] Linking CXX executable demo_hyperelasticity -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -o demo_hyperelasticity ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 81%] Linking CXX executable demo_biharmonic -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_biharmonic.dir/main.cpp.o -o demo_biharmonic ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 81%] Built target demo_hyperelasticity +[ 81%] Built target demo_mixed-poisson make -f demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build.make demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/depend +[ 81%] Built target demo_biharmonic make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/curl-curl/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/depend.internal". -Scanning dependencies of target demo_curl-curl -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build.make demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 81%] Building CXX object demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_curl-curl.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/curl-curl/cpp/main.cpp" -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 81%] Built target demo_biharmonic make -f demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build.make demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/depend.internal". +Scanning dependencies of target demo_contact-vi-tao +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build.make demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 81%] Building CXX object demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-tao/cpp/main.cpp" Scanning dependencies of target demo_dg-advection-diffusion make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build.make demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 82%] Building CXX object demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o +Scanning dependencies of target demo_curl-curl +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-advection-diffusion/cpp/main.cpp" -[ 83%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/main.cpp" -[ 83%] Linking CXX executable demo_ale -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_ale.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_ale.dir/main.cpp.o -o demo_ale ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make -f demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build.make demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 82%] Building CXX object demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_curl-curl.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/curl-curl/cpp/main.cpp" +[ 82%] Linking CXX executable demo_hyperelasticity +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -o demo_hyperelasticity ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 83%] Built target demo_ale +[ 82%] Built target demo_hyperelasticity make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/DependInfo.cmake" --color= @@ -6392,16 +6420,24 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 83%] Building CXX object demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/main.cpp.o +[ 82%] Building CXX object demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_dg-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-poisson/cpp/main.cpp" +[ 83%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/main.cpp" +[ 83%] Linking CXX executable demo_ale +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_ale.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_ale.dir/main.cpp.o -o demo_ale ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [ 84%] Linking CXX executable demo_subdomains cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_subdomains.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_subdomains.dir/main.cpp.o -o demo_subdomains ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 84%] Built target demo_subdomains +[ 84%] Built target demo_ale make -f demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/build.make demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/DependInfo.cmake" --color= +[ 84%] Linking CXX executable demo_stokes-iterative +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-iterative.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -o demo_stokes-iterative ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/depend.internal". Scanning dependencies of target demo_elasticity @@ -6410,14 +6446,8 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 84%] Building CXX object demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_elasticity.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elasticity/cpp/main.cpp" -[ 85%] Linking CXX executable demo_auto-adaptive-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/auto-adaptive-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_auto-adaptive-poisson.dir/main.cpp.o -o demo_auto-adaptive-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 85%] Linking CXX executable demo_block-matrix -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_block-matrix.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_block-matrix.dir/main.cpp.o -o demo_block-matrix ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 85%] Built target demo_auto-adaptive-poisson +[ 84%] Built target demo_subdomains make -f demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/build.make demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elastodynamics/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/DependInfo.cmake" --color= @@ -6426,11 +6456,11 @@ Scanning dependencies of target demo_elastodynamics make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/build.make demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/build -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 85%] Building CXX object demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/main.cpp.o -[ 85%] Built target demo_block-matrix +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 84%] Building CXX object demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_elastodynamics.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elastodynamics/cpp/main.cpp" +[ 84%] Built target demo_stokes-iterative make -f demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/build.make demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/eval/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/eval/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/DependInfo.cmake" --color= @@ -6440,45 +6470,45 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/build.make demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 85%] Building CXX object demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/main.cpp.o +[ 84%] Building CXX object demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/eval/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_eval.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/eval/cpp/main.cpp" -[ 86%] Linking CXX executable demo_contact-vi-tao -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-tao.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -o demo_contact-vi-tao ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 86%] Linking CXX executable demo_contact-vi-snes -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-snes.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o -o demo_contact-vi-snes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 87%] Linking CXX executable demo_conditional -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_conditional.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_conditional.dir/main.cpp.o -o demo_conditional ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 85%] Linking CXX executable demo_auto-adaptive-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/auto-adaptive-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_auto-adaptive-poisson.dir/main.cpp.o -o demo_auto-adaptive-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 87%] Built target demo_contact-vi-tao +[ 85%] Built target demo_auto-adaptive-poisson make -f demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/build.make demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/extrapolation/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/DependInfo.cmake" --color= -[ 87%] Built target demo_contact-vi-snes -make -f demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build.make demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/functional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/depend.internal". 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Scanning dependencies of target demo_extrapolation make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/build.make demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -Scanning dependencies of target demo_functional -[ 87%] Building CXX object demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/main.cpp.o +[ 85%] Building CXX object demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_extrapolation.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/extrapolation/cpp/main.cpp" +[ 85%] Linking CXX executable demo_stokes-taylor-hood +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-taylor-hood/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-taylor-hood.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG 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'/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/functional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/DependInfo.cmake" --color= +[ 85%] Linking CXX executable demo_block-matrix +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_block-matrix.dir/link.txt --verbose=1 +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/depend.internal". +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_block-matrix.dir/main.cpp.o -o demo_block-matrix ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +Scanning dependencies of target demo_functional make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build.make demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 88%] Building CXX object demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/main.cpp.o +[ 86%] Building CXX object demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_functional.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/functional/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 88%] Built target demo_conditional +[ 86%] Built target demo_block-matrix make -f demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build.make demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/gmg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/DependInfo.cmake" --color= @@ -6488,13 +6518,19 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build.make demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 88%] Building CXX object demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/main.cpp.o +[ 86%] Building CXX object demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/gmg-poisson/cpp/main.cpp" -[ 88%] Linking CXX executable demo_cahn-hilliard -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_cahn-hilliard.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o 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../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_contact-vi-tao +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-tao.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -o demo_contact-vi-tao ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_contact-vi-snes +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-snes.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o -o demo_contact-vi-snes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 88%] Built target demo_cahn-hilliard +[ 88%] Built target demo_contact-vi-tao make -f demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/build.make demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/lift-drag/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/lift-drag/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/DependInfo.cmake" --color= @@ -6504,31 +6540,25 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/build.make demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 88%] Building CXX object demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/lift-drag/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_lift-drag.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/lift-drag/cpp/main.cpp" -[ 88%] Linking CXX executable demo_stokes-taylor-hood -[ 88%] Linking CXX executable demo_navier-stokes -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-taylor-hood/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-taylor-hood.dir/link.txt --verbose=1 -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/navier-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_navier-stokes.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -o demo_stokes-taylor-hood ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_navier-stokes.dir/main.cpp.o -o demo_navier-stokes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 88%] Built target demo_navier-stokes +[ 88%] Built target demo_conditional make -f demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/build.make demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/mesh-quality/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/depend.internal". make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 88%] Built target demo_stokes-taylor-hood +[ 88%] Built target demo_contact-vi-snes make -f demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/build.make demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/meshfunction-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/DependInfo.cmake" --color= +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend.internal". Scanning dependencies of target demo_mesh-quality make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/build.make demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/build -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 88%] Building CXX object demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_mesh-quality.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/mesh-quality/cpp/main.cpp" @@ -6538,11 +6568,14 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 88%] Building CXX object demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/meshfunction-refinement/cpp/main.cpp" -[ 88%] Linking CXX executable demo_stokes-iterative -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-iterative.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -o demo_stokes-iterative ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_cahn-hilliard +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_cahn-hilliard.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -o demo_cahn-hilliard ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_dg-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_dg-poisson.dir/main.cpp.o -o demo_dg-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 88%] Built target demo_stokes-iterative +[ 88%] Built target demo_cahn-hilliard make -f demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/build.make demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/multimesh-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/DependInfo.cmake" --color= @@ -6554,9 +6587,6 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 89%] Building CXX object demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/multimesh-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-poisson/cpp/main.cpp" -[ 89%] Linking CXX executable demo_dg-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_dg-poisson.dir/main.cpp.o -o demo_dg-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 89%] Built target demo_dg-poisson make -f demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build.make demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/depend @@ -6570,11 +6600,14 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 89%] Building CXX object demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/multimesh-stokes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-stokes/cpp/main.cpp" +[ 89%] Linking CXX executable demo_navier-stokes +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/documented/navier-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_navier-stokes.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_navier-stokes.dir/main.cpp.o -o demo_navier-stokes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [ 89%] Linking CXX executable demo_advection-diffusion cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_advection-diffusion.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -o demo_advection-diffusion ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 89%] Built target demo_advection-diffusion +[ 89%] Built target demo_navier-stokes make -f demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/build.make demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/nonmatching-projection/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/nonmatching-projection/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/DependInfo.cmake" --color= @@ -6586,11 +6619,8 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 89%] Building CXX object demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/nonmatching-projection/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/nonmatching-projection/cpp/main.cpp" -[ 89%] Linking CXX executable demo_extrapolation -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_extrapolation.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_extrapolation.dir/main.cpp.o -o demo_extrapolation ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 89%] Built target demo_extrapolation +[ 89%] Built target demo_advection-diffusion make -f demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/build.make demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/parallel-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parallel-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/DependInfo.cmake" --color= @@ -6602,17 +6632,11 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 90%] Building CXX object demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parallel-refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_parallel-refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/parallel-refinement/cpp/main.cpp" -[ 90%] Linking CXX executable demo_functional -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_functional.dir/link.txt --verbose=1 [ 90%] Linking CXX executable demo_mesh-quality cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_mesh-quality.dir/link.txt --verbose=1 -[ 91%] Linking CXX executable demo_elasticity -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elasticity.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_functional.dir/main.cpp.o -o demo_functional ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_mesh-quality.dir/main.cpp.o -o demo_mesh-quality ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elasticity.dir/main.cpp.o -o demo_elasticity ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 91%] Built target demo_mesh-quality +[ 90%] Built target demo_mesh-quality make -f demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/build.make demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/parameters/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/DependInfo.cmake" --color= @@ -6622,161 +6646,172 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/build.make demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 92%] Linking CXX executable demo_meshfunction-refinement -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_meshfunction-refinement.dir/link.txt --verbose=1 -[ 92%] Building CXX object demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/main.cpp.o +[ 90%] Building CXX object demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_parameters.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/parameters/cpp/main.cpp" -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -o demo_meshfunction-refinement ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 90%] Linking CXX executable demo_extrapolation +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_extrapolation.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_extrapolation.dir/main.cpp.o -o demo_extrapolation ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 92%] Built target demo_functional +[ 90%] Built target demo_extrapolation make -f demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/build.make demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/DependInfo.cmake" --color= -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/depend.internal". -[ 92%] Built target demo_elasticity -make -f demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/build.make demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D-in-2D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/depend.internal". Scanning dependencies of target demo_poisson1D make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/build.make demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 92%] Building CXX object demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/main.cpp.o +[ 90%] Building CXX object demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson1D.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D/cpp/main.cpp" -Scanning dependencies of target demo_poisson1D-in-2D +[ 91%] Linking CXX executable demo_eval +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/eval/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_eval.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_eval.dir/main.cpp.o -o demo_eval ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 92%] Linking CXX executable demo_elasticity +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elasticity.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elasticity.dir/main.cpp.o -o demo_elasticity ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make -f demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/build.make demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/build +[ 92%] Built target demo_eval +make -f demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/build.make demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 92%] Building CXX object demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D-in-2D/cpp/main.cpp" +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D-in-2D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/DependInfo.cmake" --color= make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 92%] Built target demo_meshfunction-refinement +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/depend.internal". +[ 92%] Built target demo_elasticity make -f demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/build.make demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson-disc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/DependInfo.cmake" --color= -[ 93%] Linking CXX executable demo_lift-drag -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/lift-drag/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_lift-drag.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_lift-drag.dir/main.cpp.o -o demo_lift-drag ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/depend.internal". +[ 92%] Linking CXX executable demo_dg-advection-diffusion +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-advection-diffusion.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o -o demo_dg-advection-diffusion ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +Scanning dependencies of target demo_poisson1D-in-2D +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +make -f demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/build.make demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 92%] Building CXX object demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D-in-2D/cpp/main.cpp" Scanning dependencies of target demo_poisson-disc make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/build.make demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 93%] Building CXX object demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/main.cpp.o +[ 92%] Building CXX object demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson-disc.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson-disc/cpp/main.cpp" -[ 93%] Linking CXX executable demo_elastodynamics -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elastodynamics.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elastodynamics.dir/main.cpp.o -o demo_elastodynamics ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 94%] Linking CXX executable demo_eval -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/eval/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_eval.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_eval.dir/main.cpp.o -o demo_eval ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 94%] Built target demo_lift-drag +[ 92%] Built target demo_dg-advection-diffusion make -f demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build.make demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/depend.internal". -[ 94%] Linking CXX executable demo_gmg-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_gmg-poisson.dir/link.txt --verbose=1 Scanning dependencies of target demo_refinement make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build.make demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -o demo_gmg-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 93%] Building CXX object demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/refinement/cpp/main.cpp" +[ 94%] Linking CXX executable demo_meshfunction-refinement +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_meshfunction-refinement.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -o demo_meshfunction-refinement ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 94%] Linking CXX executable demo_elastodynamics +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elastodynamics.dir/link.txt --verbose=1 make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 95%] Building CXX object demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/main.cpp.o -[ 95%] Built target demo_elastodynamics +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elastodynamics.dir/main.cpp.o -o demo_elastodynamics ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 94%] Built target demo_meshfunction-refinement make -f demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build.make demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/depend -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/refinement/cpp/main.cpp" make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/spatial-coordinates/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/depend.internal". +[ 94%] Linking CXX executable demo_functional Scanning dependencies of target demo_spatial-coordinates make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_functional.dir/link.txt --verbose=1 make -f demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build.make demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_functional.dir/main.cpp.o -o demo_functional ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 96%] Building CXX object demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o +[ 95%] Building CXX object demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/spatial-coordinates/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 96%] Built target demo_gmg-poisson +[ 95%] Built target demo_elastodynamics make -f demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build.make demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/depend -[ 96%] Built target demo_eval -make -f demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build.make demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/submesh/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/DependInfo.cmake" --color= -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/sym-dirichlet-bc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend.internal". +[ 96%] Linking CXX executable demo_lift-drag +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/lift-drag/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_lift-drag.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_lift-drag.dir/main.cpp.o -o demo_lift-drag ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Scanning dependencies of target demo_submesh make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build.make demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 96%] Building CXX object demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_submesh.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/submesh/cpp/main.cpp" +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 96%] Built target demo_functional +make -f demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build.make demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/sym-dirichlet-bc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/DependInfo.cmake" --color= +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend.internal". Scanning dependencies of target demo_sym-dirichlet-bc make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build.make demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build -[ 96%] Building CXX object demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_submesh.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/submesh/cpp/main.cpp" make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 96%] Building CXX object demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/sym-dirichlet-bc/cpp/main.cpp" -[ 96%] Linking CXX executable demo_curl-curl -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_curl-curl.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_curl-curl.dir/main.cpp.o -o demo_curl-curl ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 96%] Linking CXX executable demo_dg-advection-diffusion -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-advection-diffusion.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o -o demo_dg-advection-diffusion ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 96%] Linking CXX executable demo_gmg-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_gmg-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -o demo_gmg-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 96%] Built target demo_curl-curl +[ 96%] Built target demo_lift-drag make -f demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build.make demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/time-series/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/DependInfo.cmake" --color= +[ 96%] Linking CXX executable demo_curl-curl +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_curl-curl.dir/link.txt --verbose=1 Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend.internal". +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_curl-curl.dir/main.cpp.o -o demo_curl-curl ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Scanning dependencies of target demo_time-series make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build.make demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 96%] Building CXX object demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_time-series.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/time-series/cpp/main.cpp" -[ 96%] Built target demo_dg-advection-diffusion +[ 96%] Linking CXX executable demo_parallel-refinement +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parallel-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_parallel-refinement.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_parallel-refinement.dir/main.cpp.o -o demo_parallel-refinement ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 96%] Built target demo_gmg-poisson make -f demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/build.make demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/waveguide/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/depend.internal". +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 96%] Built target demo_parallel-refinement Scanning dependencies of target demo_waveguide make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' make -f demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/build.make demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 97%] Building CXX object demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_waveguide.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/waveguide/cpp/main.cpp" -[ 97%] Linking CXX executable demo_multimesh-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/multimesh-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -o demo_multimesh-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 97%] Built target demo_multimesh-poisson -[ 97%] Linking CXX executable demo_parallel-refinement -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parallel-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_parallel-refinement.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_parallel-refinement.dir/main.cpp.o -o demo_parallel-refinement ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 97%] Built target demo_parallel-refinement +[ 97%] Built target demo_curl-curl [ 97%] Linking CXX executable demo_parameters cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_parameters.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_parameters.dir/main.cpp.o -o demo_parameters ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 97%] Built target demo_parameters +[ 97%] Linking CXX executable demo_multimesh-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/multimesh-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -o demo_multimesh-poisson ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 97%] Built target demo_multimesh-poisson [ 97%] Linking CXX executable demo_refinement cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_refinement.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_refinement.dir/main.cpp.o -o demo_refinement ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so @@ -6785,18 +6820,14 @@ [ 98%] Linking CXX executable demo_poisson1D cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson1D.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson1D.dir/main.cpp.o -o demo_poisson1D ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 98%] Built target demo_poisson1D [ 98%] Linking CXX executable demo_submesh cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_submesh.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_submesh.dir/main.cpp.o -o demo_submesh ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 98%] Built target demo_poisson1D [ 98%] Linking CXX executable demo_poisson1D-in-2D cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson1D-in-2D.dir/link.txt --verbose=1 -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -o demo_poisson1D-in-2D ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 98%] Built target demo_submesh -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 98%] Built target demo_poisson1D-in-2D [ 98%] Linking CXX executable demo_nonmatching-projection cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/nonmatching-projection/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-projection.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o -o demo_nonmatching-projection ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so @@ -6804,39 +6835,43 @@ cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_time-series.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_time-series.dir/main.cpp.o -o demo_time-series ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 98%] Built target demo_submesh +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[ 98%] Built target demo_poisson1D-in-2D +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 98%] Built target demo_nonmatching-projection make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 98%] Built target demo_time-series -[ 98%] Linking CXX executable demo_spatial-coordinates -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_spatial-coordinates.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o -o demo_spatial-coordinates ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [ 98%] Linking CXX executable demo_poisson-disc cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson-disc.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson-disc.dir/main.cpp.o -o demo_poisson-disc ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[ 98%] Built target demo_spatial-coordinates -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [ 98%] Built target demo_poisson-disc +[ 98%] Linking CXX executable demo_spatial-coordinates +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_spatial-coordinates.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o -o demo_spatial-coordinates ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [100%] Linking CXX executable demo_sym-dirichlet-bc cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_sym-dirichlet-bc.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -o demo_sym-dirichlet-bc ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[100%] Built target demo_spatial-coordinates +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [100%] Built target demo_sym-dirichlet-bc [100%] Linking CXX executable demo_multimesh-stokes cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/multimesh-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-stokes.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -o demo_multimesh-stokes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [100%] Built target demo_multimesh-stokes -[100%] Linking CXX executable demo_auto-adaptive-navier-stokes -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-navier-stokes.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -o demo_auto-adaptive-navier-stokes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' -[100%] Built target demo_auto-adaptive-navier-stokes [100%] Linking CXX executable demo_waveguide cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_waveguide.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_waveguide.dir/main.cpp.o -o demo_waveguide ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' [100%] Built target demo_waveguide +[100%] Linking CXX executable demo_auto-adaptive-navier-stokes +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo/undocumented/auto-adaptive-navier-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-navier-stokes.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -o demo_auto-adaptive-navier-stokes ../../../../dolfin/libdolfin.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' +[100%] Built target demo_auto-adaptive-navier-stokes make[7]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/CMakeFiles" 0 make[6]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu/demo' @@ -6849,11 +6884,11 @@ Run C++ unit tests (serial) Test project /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu Start 1: unittests -1/1 Test #1: unittests ........................ Passed 2.71 sec +1/1 Test #1: unittests ........................ Passed 6.65 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 2.72 sec +Total Test time (real) = 6.84 sec Run C++ regressions tests (serial) Test project /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu Start 3: demo_auto-adaptive-poisson_serial @@ -6871,93 +6906,93 @@ Start 28: demo_singular-poisson_serial Start 30: demo_stokes-iterative_serial Start 32: demo_stokes-taylor-hood_serial - 1/49 Test #9: demo_built-in-meshes_serial ............... Passed 0.83 sec Start 34: demo_subdomains_serial - 2/49 Test #20: demo_nonlinear-poisson_serial ............. Passed 0.95 sec + 1/49 Test #20: demo_nonlinear-poisson_serial ............. Passed 0.98 sec Start 36: demo_advection-diffusion_serial - 3/49 Test #24: demo_periodic_serial ...................... Passed 0.96 sec + 2/49 Test #24: demo_periodic_serial ...................... Passed 1.04 sec Start 38: demo_ale_serial - 4/49 Test #14: demo_mixed-poisson_serial ................. Passed 1.02 sec + 3/49 Test #26: demo_poisson_serial ....................... Passed 1.07 sec Start 40: demo_auto-adaptive-navier-stokes_serial - 5/49 Test #18: demo_neumann-poisson_serial ............... Passed 1.03 sec + 4/49 Test #7: demo_biharmonic_serial .................... Passed 1.14 sec Start 42: demo_block-matrix_serial - 6/49 Test #26: demo_poisson_serial ....................... Passed 1.02 sec + 5/49 Test #34: demo_subdomains_serial .................... Passed 1.09 sec Start 44: demo_conditional_serial - 7/49 Test #22: demo_nonmatching-interpolation_serial ..... Passed 1.12 sec + 6/49 Test #38: demo_ale_serial ........................... Passed 0.63 sec Start 46: demo_contact-vi-snes_serial - 8/49 Test #7: demo_biharmonic_serial .................... Passed 1.15 sec + 7/49 Test #5: demo_bcs_serial ........................... Passed 1.74 sec Start 48: demo_contact-vi-tao_serial - 9/49 Test #12: demo_eigenvalue_serial .................... Passed 1.30 sec + 8/49 Test #42: demo_block-matrix_serial .................. Passed 0.62 sec Start 50: demo_curl-curl_serial -10/49 Test #28: demo_singular-poisson_serial .............. Passed 1.30 sec + 9/49 Test #22: demo_nonmatching-interpolation_serial ..... Passed 1.90 sec Start 52: demo_dg-advection-diffusion_serial -11/49 Test #5: demo_bcs_serial ........................... Passed 1.59 sec +10/49 Test #18: demo_neumann-poisson_serial ............... Passed 1.91 sec Start 54: demo_dg-poisson_serial -12/49 Test #34: demo_subdomains_serial .................... Passed 0.79 sec +11/49 Test #28: demo_singular-poisson_serial .............. Passed 1.87 sec Start 56: demo_elasticity_serial -13/49 Test #38: demo_ale_serial ........................... Passed 0.71 sec +12/49 Test #14: demo_mixed-poisson_serial ................. Passed 1.94 sec Start 57: demo_elastodynamics_serial -14/49 Test #42: demo_block-matrix_serial .................. Passed 0.75 sec +13/49 Test #12: demo_eigenvalue_serial .................... Passed 1.95 sec Start 59: demo_eval_serial -15/49 Test #48: demo_contact-vi-tao_serial ................ Passed 1.01 sec +14/49 Test #9: demo_built-in-meshes_serial ............... Passed 1.97 sec Start 61: demo_extrapolation_serial -16/49 Test #44: demo_conditional_serial ................... Passed 1.13 sec +15/49 Test #44: demo_conditional_serial ................... Passed 0.94 sec Start 63: demo_functional_serial -17/49 Test #54: demo_dg-poisson_serial .................... Passed 0.82 sec +16/49 Test #32: demo_stokes-taylor-hood_serial ............ Passed 2.33 sec Start 65: demo_gmg-poisson_serial -18/49 Test #32: demo_stokes-taylor-hood_serial ............ Passed 2.44 sec +17/49 Test #54: demo_dg-poisson_serial .................... Passed 0.74 sec Start 67: demo_lift-drag_serial -19/49 Test #46: demo_contact-vi-snes_serial ............... Passed 1.39 sec +18/49 Test #61: demo_extrapolation_serial ................. Passed 0.74 sec Start 69: demo_mesh-quality_serial -20/49 Test #52: demo_dg-advection-diffusion_serial ........ Passed 1.34 sec +19/49 Test #63: demo_functional_serial .................... Passed 0.76 sec Start 71: demo_meshfunction-refinement_serial -21/49 Test #61: demo_extrapolation_serial ................. Passed 0.75 sec +20/49 Test #36: demo_advection-diffusion_serial ........... Passed 1.92 sec Start 73: demo_multimesh-poisson_serial -22/49 Test #36: demo_advection-diffusion_serial ........... Passed 2.00 sec +21/49 Test #48: demo_contact-vi-tao_serial ................ Passed 1.41 sec Start 75: demo_multimesh-stokes_serial -23/49 Test #63: demo_functional_serial .................... Passed 0.85 sec +22/49 Test #65: demo_gmg-poisson_serial ................... Passed 0.92 sec Start 77: demo_nonmatching-projection_serial -24/49 Test #67: demo_lift-drag_serial ..................... Passed 0.77 sec +23/49 Test #52: demo_dg-advection-diffusion_serial ........ Passed 1.54 sec Start 79: demo_parallel-refinement_serial -25/49 Test #69: demo_mesh-quality_serial .................. Passed 0.81 sec +24/49 Test #59: demo_eval_serial .......................... Passed 1.55 sec Start 81: demo_parameters_serial -26/49 Test #59: demo_eval_serial .......................... Passed 1.57 sec +25/49 Test #69: demo_mesh-quality_serial .................. Passed 0.83 sec Start 83: demo_poisson1D_serial -27/49 Test #65: demo_gmg-poisson_serial ................... Passed 0.97 sec +26/49 Test #67: demo_lift-drag_serial ..................... Passed 0.97 sec Start 85: demo_poisson1D-in-2D_serial -28/49 Test #71: demo_meshfunction-refinement_serial ....... Passed 0.73 sec +27/49 Test #71: demo_meshfunction-refinement_serial ....... Passed 0.98 sec Start 87: demo_poisson-disc_serial -29/49 Test #16: demo_navier-stokes_serial ................. Passed 4.03 sec +28/49 Test #46: demo_contact-vi-snes_serial ............... Passed 2.33 sec Start 89: demo_refinement_serial -30/49 Test #81: demo_parameters_serial .................... Passed 0.74 sec +29/49 Test #79: demo_parallel-refinement_serial ........... Passed 0.74 sec Start 91: demo_spatial-coordinates_serial -31/49 Test #79: demo_parallel-refinement_serial ........... Passed 0.79 sec +30/49 Test #81: demo_parameters_serial .................... Passed 0.86 sec Start 93: demo_submesh_serial -32/49 Test #85: demo_poisson1D-in-2D_serial ............... Passed 0.72 sec +31/49 Test #83: demo_poisson1D_serial ..................... Passed 0.89 sec Start 95: demo_sym-dirichlet-bc_serial -33/49 Test #83: demo_poisson1D_serial ..................... Passed 0.83 sec +32/49 Test #16: demo_navier-stokes_serial ................. Passed 4.52 sec Start 97: demo_time-series_serial -34/49 Test #75: demo_multimesh-stokes_serial .............. Passed 1.28 sec +33/49 Test #77: demo_nonmatching-projection_serial ........ Passed 1.22 sec Start 99: demo_waveguide_serial -35/49 Test #77: demo_nonmatching-projection_serial ........ Passed 1.22 sec -36/49 Test #87: demo_poisson-disc_serial .................. Passed 0.97 sec -37/49 Test #93: demo_submesh_serial ....................... Passed 0.80 sec -38/49 Test #91: demo_spatial-coordinates_serial ........... Passed 0.84 sec -39/49 Test #97: demo_time-series_serial ................... Passed 0.73 sec -40/49 Test #89: demo_refinement_serial .................... Passed 0.90 sec -41/49 Test #99: demo_waveguide_serial ..................... Passed 0.92 sec -42/49 Test #73: demo_multimesh-poisson_serial ............. Passed 2.85 sec -43/49 Test #3: demo_auto-adaptive-poisson_serial ......... Passed 7.32 sec -44/49 Test #95: demo_sym-dirichlet-bc_serial .............. Passed 4.02 sec -45/49 Test #50: demo_curl-curl_serial ..................... Passed 7.71 sec -46/49 Test #56: demo_elasticity_serial .................... Passed 7.67 sec -47/49 Test #40: demo_auto-adaptive-navier-stokes_serial ... Passed 22.85 sec -48/49 Test #57: demo_elastodynamics_serial ................ Passed 23.48 sec -49/49 Test #30: demo_stokes-iterative_serial .............. Passed 56.53 sec +34/49 Test #85: demo_poisson1D-in-2D_serial ............... Passed 1.00 sec +35/49 Test #75: demo_multimesh-stokes_serial .............. Passed 1.50 sec +36/49 Test #89: demo_refinement_serial .................... Passed 0.98 sec +37/49 Test #87: demo_poisson-disc_serial .................. Passed 1.16 sec +38/49 Test #93: demo_submesh_serial ....................... Passed 0.75 sec +39/49 Test #91: demo_spatial-coordinates_serial ........... Passed 1.03 sec +40/49 Test #97: demo_time-series_serial ................... Passed 0.85 sec +41/49 Test #99: demo_waveguide_serial ..................... Passed 0.88 sec +42/49 Test #73: demo_multimesh-poisson_serial ............. Passed 3.04 sec +43/49 Test #3: demo_auto-adaptive-poisson_serial ......... Passed 7.25 sec +44/49 Test #95: demo_sym-dirichlet-bc_serial .............. Passed 4.42 sec +45/49 Test #50: demo_curl-curl_serial ..................... Passed 7.67 sec +46/49 Test #56: demo_elasticity_serial .................... Passed 7.55 sec +47/49 Test #40: demo_auto-adaptive-navier-stokes_serial ... Passed 23.27 sec +48/49 Test #57: demo_elastodynamics_serial ................ Passed 23.98 sec +49/49 Test #30: demo_stokes-iterative_serial .............. Passed 43.21 sec 100% tests passed, 0 tests failed out of 49 -Total Test time (real) = 56.60 sec +Total Test time (real) = 43.29 sec Run C++ regression tests (MPI) Test project /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu Start 2: demo_auto-adaptive-poisson_mpi @@ -6965,110 +7000,110 @@ Start 6: demo_biharmonic_mpi Start 8: demo_built-in-meshes_mpi Start 10: demo_cahn-hilliard_mpi - 1/49 Test #2: demo_auto-adaptive-poisson_mpi ......... Passed 1.26 sec Start 11: demo_eigenvalue_mpi - 2/49 Test #6: demo_biharmonic_mpi .................... Passed 2.18 sec + 1/49 Test #2: demo_auto-adaptive-poisson_mpi ......... Passed 0.72 sec Start 13: demo_mixed-poisson_mpi - 3/49 Test #8: demo_built-in-meshes_mpi ............... Passed 3.16 sec + 2/49 Test #6: demo_biharmonic_mpi .................... Passed 1.35 sec Start 15: demo_navier-stokes_mpi - 4/49 Test #11: demo_eigenvalue_mpi .................... Passed 2.20 sec + 3/49 Test #8: demo_built-in-meshes_mpi ............... Passed 1.50 sec Start 17: demo_neumann-poisson_mpi - 5/49 Test #13: demo_mixed-poisson_mpi ................. Passed 2.40 sec + 4/49 Test #11: demo_eigenvalue_mpi .................... Passed 1.52 sec Start 19: demo_nonlinear-poisson_mpi - 6/49 Test #4: demo_bcs_mpi ........................... Passed 4.78 sec + 5/49 Test #13: demo_mixed-poisson_mpi ................. Passed 0.90 sec Start 21: demo_nonmatching-interpolation_mpi - 7/49 Test #17: demo_neumann-poisson_mpi ............... Passed 2.30 sec + 6/49 Test #4: demo_bcs_mpi ........................... Passed 1.62 sec Start 23: demo_periodic_mpi - 8/49 Test #21: demo_nonmatching-interpolation_mpi ..... Passed 1.25 sec + 7/49 Test #19: demo_nonlinear-poisson_mpi ............. Passed 0.58 sec Start 25: demo_poisson_mpi - 9/49 Test #19: demo_nonlinear-poisson_mpi ............. Passed 1.67 sec + 8/49 Test #21: demo_nonmatching-interpolation_mpi ..... Passed 0.60 sec Start 27: demo_singular-poisson_mpi -10/49 Test #23: demo_periodic_mpi ...................... Passed 1.76 sec + 9/49 Test #17: demo_neumann-poisson_mpi ............... Passed 0.74 sec Start 29: demo_stokes-iterative_mpi -11/49 Test #25: demo_poisson_mpi ....................... Passed 2.09 sec +10/49 Test #23: demo_periodic_mpi ...................... Passed 0.65 sec Start 31: demo_stokes-taylor-hood_mpi -12/49 Test #27: demo_singular-poisson_mpi .............. Passed 4.76 sec +11/49 Test #25: demo_poisson_mpi ....................... Passed 0.60 sec Start 33: demo_subdomains_mpi -13/49 Test #33: demo_subdomains_mpi .................... Passed 1.30 sec +12/49 Test #33: demo_subdomains_mpi .................... Passed 0.77 sec Start 35: demo_advection-diffusion_mpi -14/49 Test #31: demo_stokes-taylor-hood_mpi ............ Passed 5.15 sec +13/49 Test #31: demo_stokes-taylor-hood_mpi ............ Passed 1.88 sec Start 37: demo_ale_mpi -15/49 Test #37: demo_ale_mpi ........................... Passed 2.26 sec +14/49 Test #27: demo_singular-poisson_mpi .............. Passed 2.11 sec Start 39: demo_auto-adaptive-navier-stokes_mpi -16/49 Test #39: demo_auto-adaptive-navier-stokes_mpi ... Passed 1.32 sec +15/49 Test #37: demo_ale_mpi ........................... Passed 1.03 sec Start 41: demo_block-matrix_mpi -17/49 Test #41: demo_block-matrix_mpi .................. Passed 1.25 sec +16/49 Test #39: demo_auto-adaptive-navier-stokes_mpi ... Passed 0.91 sec Start 43: demo_conditional_mpi -18/49 Test #35: demo_advection-diffusion_mpi ........... Passed 6.16 sec +17/49 Test #35: demo_advection-diffusion_mpi ........... Passed 2.11 sec Start 45: demo_contact-vi-snes_mpi -19/49 Test #43: demo_conditional_mpi ................... Passed 2.34 sec +18/49 Test #15: demo_navier-stokes_mpi ................. Passed 4.59 sec Start 47: demo_contact-vi-tao_mpi -20/49 Test #45: demo_contact-vi-snes_mpi ............... Passed 4.07 sec +19/49 Test #41: demo_block-matrix_mpi .................. Passed 1.03 sec Start 49: demo_curl-curl_mpi -21/49 Test #47: demo_contact-vi-tao_mpi ................ Passed 3.91 sec +20/49 Test #43: demo_conditional_mpi ................... Passed 1.31 sec Start 51: demo_dg-advection-diffusion_mpi -22/49 Test #51: demo_dg-advection-diffusion_mpi ........ Passed 3.96 sec +21/49 Test #47: demo_contact-vi-tao_mpi ................ Passed 1.07 sec Start 53: demo_dg-poisson_mpi -23/49 Test #53: demo_dg-poisson_mpi .................... Passed 2.27 sec +22/49 Test #45: demo_contact-vi-snes_mpi ............... Passed 1.43 sec Start 55: demo_elasticity_mpi -24/49 Test #49: demo_curl-curl_mpi ..................... Passed 12.74 sec +23/49 Test #53: demo_dg-poisson_mpi .................... Passed 1.28 sec Start 58: demo_eval_mpi -25/49 Test #58: demo_eval_mpi .......................... Passed 1.19 sec +24/49 Test #51: demo_dg-advection-diffusion_mpi ........ Passed 1.76 sec Start 60: demo_extrapolation_mpi -26/49 Test #60: demo_extrapolation_mpi ................. Passed 1.22 sec +25/49 Test #58: demo_eval_mpi .......................... Passed 0.96 sec Start 62: demo_functional_mpi -27/49 Test #62: demo_functional_mpi .................... Passed 2.06 sec +26/49 Test #60: demo_extrapolation_mpi ................. Passed 0.99 sec Start 64: demo_gmg-poisson_mpi -28/49 Test #64: demo_gmg-poisson_mpi ................... Passed 2.74 sec +27/49 Test #62: demo_functional_mpi .................... Passed 1.09 sec Start 66: demo_lift-drag_mpi -29/49 Test #55: demo_elasticity_mpi .................... Passed 12.94 sec +28/49 Test #64: demo_gmg-poisson_mpi ................... Passed 1.86 sec Start 68: demo_mesh-quality_mpi -30/49 Test #66: demo_lift-drag_mpi ..................... Passed 2.35 sec +29/49 Test #49: demo_curl-curl_mpi ..................... Passed 5.38 sec Start 70: demo_meshfunction-refinement_mpi -31/49 Test #68: demo_mesh-quality_mpi .................. Passed 1.38 sec +30/49 Test #66: demo_lift-drag_mpi ..................... Passed 1.26 sec Start 72: demo_multimesh-poisson_mpi -32/49 Test #15: demo_navier-stokes_mpi ................. Passed 41.86 sec +31/49 Test #55: demo_elasticity_mpi .................... Passed 5.16 sec Start 74: demo_multimesh-stokes_mpi -33/49 Test #70: demo_meshfunction-refinement_mpi ....... Passed 1.17 sec +32/49 Test #68: demo_mesh-quality_mpi .................. Passed 1.04 sec Start 76: demo_nonmatching-projection_mpi -34/49 Test #72: demo_multimesh-poisson_mpi ............. Passed 1.13 sec +33/49 Test #70: demo_meshfunction-refinement_mpi ....... Passed 0.89 sec Start 78: demo_parallel-refinement_mpi -35/49 Test #74: demo_multimesh-stokes_mpi .............. Passed 1.17 sec +34/49 Test #72: demo_multimesh-poisson_mpi ............. Passed 0.91 sec Start 80: demo_parameters_mpi -36/49 Test #76: demo_nonmatching-projection_mpi ........ Passed 1.16 sec +35/49 Test #76: demo_nonmatching-projection_mpi ........ Passed 0.67 sec Start 82: demo_poisson1D_mpi -37/49 Test #80: demo_parameters_mpi .................... Passed 1.39 sec +36/49 Test #74: demo_multimesh-stokes_mpi .............. Passed 0.69 sec Start 84: demo_poisson1D-in-2D_mpi -38/49 Test #78: demo_parallel-refinement_mpi ........... Passed 1.71 sec +37/49 Test #80: demo_parameters_mpi .................... Passed 0.66 sec Start 86: demo_poisson-disc_mpi -39/49 Test #82: demo_poisson1D_mpi ..................... Passed 1.31 sec +38/49 Test #78: demo_parallel-refinement_mpi ........... Passed 0.73 sec Start 88: demo_refinement_mpi -40/49 Test #84: demo_poisson1D-in-2D_mpi ............... Passed 1.19 sec +39/49 Test #84: demo_poisson1D-in-2D_mpi ............... Passed 0.60 sec Start 90: demo_spatial-coordinates_mpi -41/49 Test #86: demo_poisson-disc_mpi .................. Passed 1.24 sec +40/49 Test #82: demo_poisson1D_mpi ..................... Passed 0.65 sec Start 92: demo_submesh_mpi -42/49 Test #92: demo_submesh_mpi ....................... Passed 1.16 sec +41/49 Test #86: demo_poisson-disc_mpi .................. Passed 0.65 sec Start 94: demo_sym-dirichlet-bc_mpi -43/49 Test #90: demo_spatial-coordinates_mpi ........... Passed 1.46 sec +42/49 Test #88: demo_refinement_mpi .................... Passed 0.84 sec Start 96: demo_time-series_mpi -44/49 Test #88: demo_refinement_mpi .................... Passed 1.84 sec +43/49 Test #90: demo_spatial-coordinates_mpi ........... Passed 0.67 sec Start 98: demo_waveguide_mpi -45/49 Test #96: demo_time-series_mpi ................... Passed 1.09 sec -46/49 Test #98: demo_waveguide_mpi ..................... Passed 1.53 sec -47/49 Test #94: demo_sym-dirichlet-bc_mpi .............. Passed 7.50 sec -48/49 Test #29: demo_stokes-iterative_mpi .............. Passed 53.67 sec -49/49 Test #10: demo_cahn-hilliard_mpi ................. Passed 99.31 sec +44/49 Test #92: demo_submesh_mpi ....................... Passed 0.63 sec +45/49 Test #96: demo_time-series_mpi ................... Passed 0.60 sec +46/49 Test #98: demo_waveguide_mpi ..................... Passed 0.89 sec +47/49 Test #94: demo_sym-dirichlet-bc_mpi .............. Passed 3.40 sec +48/49 Test #29: demo_stokes-iterative_mpi .............. Passed 23.61 sec +49/49 Test #10: demo_cahn-hilliard_mpi ................. Passed 57.38 sec 100% tests passed, 0 tests failed out of 49 -Total Test time (real) = 99.38 sec +Total Test time (real) = 57.41 sec case " mips64el hurd-i386 m68k sh4 " in \ *\ amd64\ *) echo "ALL 64-bit tests have been disabled on amd64";; \ *) set -e; \ cp -ra obj-x86_64-linux-gnu-64 installation-build-64; \ cd obj-x86_64-linux-gnu-64; \ - make -j15 unittests VERBOSE=1; \ - make -j15 demos VERBOSE=1; \ + make -j16 unittests VERBOSE=1; \ + make -j16 demos VERBOSE=1; \ case " i386 mipsel ppc64el ia64 " in \ *\ amd64\ *) IGNORE_MPI_TESTS="demo_hyperelasticity_mpi demo_elastodynamics_mpi demo_cahn-hilliard_mpi demo_navier-stokes_mpi demo_elasticity_mpi ";; \ *) IGNORE_MPI_TESTS="demo_hyperelasticity_mpi demo_elastodynamics_mpi ";; \ @@ -7077,11 +7112,11 @@ echo "Run C++ 64-bit unit tests (serial)"; \ LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -R unittests; \ echo "Run C++ 64-bit regressions tests (serial)"; \ - LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j15 -R demo -R serial; \ + LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j16 -R demo -R serial; \ echo "Run C++ 64-bit regression tests (MPI)"; \ case " armel armhf i386 hppa m68k powerpc " in \ *\ amd64\ *) echo "MPI 64-bit tests have been disabled on amd64";; \ - *) LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j5 -R demo -R mpi || /bin/true;; \ + *) LD_LIBRARY_PATH=/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin:${LD_LIBRARY_PATH} ctest --output-on-failure -j6 -R demo -R mpi || /bin/true;; \ esac; \ cd ..; \ mv obj-x86_64-linux-gnu-64 build-tests-64; \ @@ -7124,33 +7159,33 @@ make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 92%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/main.cpp.o [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o -[ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/ConvexTriangulation.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/main.cpp" +[ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/IntersectionConstruction.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/common/SubSystemsManager.cpp" +[ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/ConvexTriangulation.cpp.o [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/function/Expression.cpp.o [ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshData.cpp.o -[ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/IntersectionConstruction.cpp.o -[ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshValueCollection.cpp.o [ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/la/LinearOperator.cpp.o +[ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshValueCollection.cpp.o [ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/la/Vector.cpp.o -[ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/Mesh.cpp.o -[ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/parameter/Parameters.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/common/SubSystemsManager.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/function/Expression.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/function/Expression.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/geometry/ConvexTriangulation.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/geometry/ConvexTriangulation.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/geometry/IntersectionConstruction.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/geometry/IntersectionConstruction.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI 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test/unit/cpp/CMakeFiles/unittests.dir/mesh/MeshValueCollection.cpp.o -[ 98%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/MeshFunction.cpp.o -[ 98%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/MeshColoring.cpp.o -[ 98%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/MultiMesh.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/mesh/MeshValueCollection.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/mesh/MeshValueCollection.cpp" +[ 98%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/MultiMesh.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/mesh/MultiMesh.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/mesh/MultiMesh.cpp" +[ 98%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/parameter/Parameters.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/test/unit/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -I"/build/dolfin-2019.2.0~git20201207.b495043/test/unit/cpp/catch" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem 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Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/CMakeFiles/demos_source.dir/depend.internal". Scanning dependencies of target demos_source make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +make -f CMakeFiles/demos_source.dir/build.make CMakeFiles/demos_source.dir/build Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/CMakeFiles/copy_data_test_demo.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/CMakeFiles/copy_data_test_demo.dir/depend.internal". 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Scanning dependencies of target copy_data_test_demo -make -f CMakeFiles/demos_source.dir/build.make CMakeFiles/demos_source.dir/build -make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make[5]: Nothing to be done for 'CMakeFiles/demos_source.dir/build'. make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +make[5]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f CMakeFiles/copy_data_test_demo.dir/build.make CMakeFiles/copy_data_test_demo.dir/build make[5]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' /usr/bin/python3 -B -u /build/dolfin-2019.2.0~git20201207.b495043/cmake/scripts/copy-test-demo-data.py /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 @@ -7227,170 +7262,181 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 68%] Built target dolfin make -f demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/build.make demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/depend +make -f demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/build.make demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/depend +make -f demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build.make demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/depend +make -f demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build.make demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/depend +make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/auto-adaptive-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/DependInfo.cmake" --color= -make -f demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/build.make demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/depend +make -f demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build.make demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend +make -f demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build.make demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/bcs/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/DependInfo.cmake" --color= -make -f demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build.make demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +make -f demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/build.make demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/depend cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/biharmonic/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake" --color= -make -f demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build.make demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/depend -make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/built-in-meshes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/built-in-meshes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/DependInfo.cmake" --color= -make -f demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build.make demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/DependInfo.cmake" --color= -make -f demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build.make demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/DependInfo.cmake" --color= cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/eigenvalue/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/hyperelasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake" --color= -make -f demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/build.make demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/depend.internal". make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/mixed-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/DependInfo.cmake" --color= make -f demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/build.make demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/depend.internal". make -f demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/build.make demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend +make -f demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build.make demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/depend +make -f demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build.make demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/depend +make -f demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/build.make demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/DependInfo.cmake" --color= -make -f demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build.make demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/neumann-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/built-in-meshes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/depend.internal". +make -f demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/build.make demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/nonlinear-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/DependInfo.cmake" --color= -make -f demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build.make demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/depend -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend.internal". -make -f demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/build.make demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/nonmatching-interpolation/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/depend.internal". -Dependee 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend.internal". -make -f demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/build.make demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/DependInfo.cmake" --color= +make -f demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/build.make demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/singular-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/singular-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/depend.internal". +make -f demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build.make demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend +Dependee 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+Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/demo_auto-adaptive-poisson.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/DependInfo.cmake" is newer than depender 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Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/depend.internal". 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Scanning dependencies of target demo_biharmonic -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/depend.internal". -Scanning dependencies of target demo_bcs make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build.make demo/documented/biharmonic/cpp/CMakeFiles/demo_biharmonic.dir/build +Scanning dependencies of target 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demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build.make demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build -Scanning dependencies of target demo_built-in-meshes +Scanning dependencies of target demo_nonmatching-interpolation make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build.make demo/documented/built-in-meshes/cpp/CMakeFiles/demo_built-in-meshes.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +Scanning dependencies of target demo_bcs +Scanning dependencies of target demo_periodic Scanning dependencies of target demo_auto-adaptive-poisson -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/biharmonic/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/build.make demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/build +make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_neumann-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/neumann-poisson/cpp/main.cpp" make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build.make demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build -[ 70%] Building CXX object demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -make -f demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build.make demo/documented/nonmatching-interpolation/cpp/CMakeFiles/demo_nonmatching-interpolation.dir/build -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/mixed-poisson/cpp/main.cpp" -[ 71%] Building CXX object demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o +[ 68%] Building CXX object demo/documented/bcs/cpp/CMakeFiles/demo_bcs.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem 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/usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/nonmatching-interpolation/cpp/main.cpp" +[ 69%] Building CXX object demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/main.cpp.o make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/hyperelasticity/cpp/main.cpp" +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_eigenvalue.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/eigenvalue/cpp/main.cpp" make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 69%] Building CXX object demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/mixed-poisson/cpp/main.cpp" +[ 70%] Building CXX object demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o 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demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/build +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/periodic/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_periodic.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/periodic/cpp/main.cpp" cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/CahnHilliard2D.cpp" -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 71%] Building CXX object demo/documented/neumann-poisson/cpp/CMakeFiles/demo_neumann-poisson.dir/main.cpp.o -[ 72%] Building CXX object demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem 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demo/documented/nonlinear-poisson/cpp/CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o 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demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/build.make demo/documented/singular-poisson/cpp/CMakeFiles/demo_singular-poisson.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/build.make demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 73%] Building CXX object demo/documented/periodic/cpp/CMakeFiles/demo_periodic.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/periodic/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/poisson/cpp/main.cpp" +[ 73%] Building CXX object demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_navier-stokes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/navier-stokes/cpp/main.cpp" [ 73%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/CahnHilliard3D.cpp" [ 73%] Linking CXX executable demo_built-in-meshes @@ -7398,137 +7444,118 @@ /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_built-in-meshes.dir/main.cpp.o -o demo_built-in-meshes ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 73%] Built target demo_built-in-meshes -make -f demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build.make demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-iterative/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/depend.internal". -Scanning dependencies of target demo_stokes-iterative -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build.make demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 73%] Building CXX object demo/documented/stokes-iterative/cpp/CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-iterative/cpp/main.cpp" -[ 74%] Linking CXX executable demo_neumann-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_neumann-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_neumann-poisson.dir/main.cpp.o -o demo_neumann-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 75%] Linking CXX executable demo_nonmatching-interpolation -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-interpolation.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o -o demo_nonmatching-interpolation ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 75%] Built target demo_neumann-poisson make -f demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/build.make demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-taylor-hood/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/depend.internal". +Scanning dependencies of target demo_stokes-taylor-hood make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 75%] Linking CXX executable demo_nonlinear-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonlinear-poisson.dir/link.txt --verbose=1 -[ 75%] Built target demo_nonmatching-interpolation -make -f demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build.make demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend -/usr/bin/c++ -Wno-comment 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"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/subdomains/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". -[ 76%] Linking CXX executable demo_poisson +[ 74%] Building CXX object demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-taylor-hood/cpp/main.cpp" +[ 75%] Linking CXX executable demo_poisson cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson.dir/main.cpp.o -o demo_poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -Scanning dependencies of target demo_stokes-taylor-hood +[ 76%] Linking CXX executable demo_neumann-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/neumann-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_neumann-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_neumann-poisson.dir/main.cpp.o -o demo_neumann-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/build.make demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/build +[ 76%] Built target demo_poisson +make -f demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build.make demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/subdomains/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/DependInfo.cmake" --color= +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/depend.internal". Scanning dependencies of target demo_subdomains make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build.make demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/build -[ 77%] Building CXX object demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/stokes-taylor-hood/cpp/main.cpp" make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 77%] Building CXX object demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/main.cpp.o +[ 76%] Building CXX object demo/documented/subdomains/cpp/CMakeFiles/demo_subdomains.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/subdomains/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_subdomains.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/subdomains/cpp/main.cpp" -[ 77%] Linking CXX executable demo_eigenvalue -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_eigenvalue.dir/link.txt --verbose=1 -[ 77%] Linking CXX executable demo_periodic -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/periodic/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_periodic.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_eigenvalue.dir/main.cpp.o -o demo_eigenvalue ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_periodic.dir/main.cpp.o -o demo_periodic ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 77%] Linking CXX executable demo_singular-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/singular-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_singular-poisson.dir/link.txt --verbose=1 -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_singular-poisson.dir/main.cpp.o -o demo_singular-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 77%] Built target demo_poisson +[ 76%] Linking CXX executable demo_periodic +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/periodic/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_periodic.dir/link.txt --verbose=1 +[ 76%] Built target demo_neumann-poisson make -f demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build.make demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/DependInfo.cmake" --color= -[ 77%] Built target demo_nonlinear-poisson -make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/ale/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/DependInfo.cmake" --color= +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_periodic.dir/main.cpp.o -o demo_periodic ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend.internal". Scanning dependencies of target demo_advection-diffusion make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build.make demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 77%] Building CXX object demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/advection-diffusion/cpp/main.cpp" +[ 77%] Linking CXX executable demo_nonlinear-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonlinear-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonlinear-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -o demo_nonlinear-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 77%] Built target demo_periodic +make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/ale/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/DependInfo.cmake" --color= +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/depend.internal". Scanning dependencies of target demo_ale make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build +[ 78%] Linking CXX executable demo_nonmatching-interpolation make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 78%] Building CXX object demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/advection-diffusion/cpp/main.cpp" +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/nonmatching-interpolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-interpolation.dir/link.txt --verbose=1 [ 78%] Building CXX object demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/ale/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_ale.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/ale/cpp/main.cpp" +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o -o demo_nonmatching-interpolation ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 78%] Built target demo_eigenvalue +[ 78%] Built target demo_nonlinear-poisson make -f demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/build.make demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/auto-adaptive-navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/DependInfo.cmake" --color= -[ 78%] Built target demo_periodic -make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/block-matrix/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/DependInfo.cmake" --color= +[ 78%] Linking CXX executable demo_singular-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/singular-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_singular-poisson.dir/link.txt --verbose=1 Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend.internal". +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_singular-poisson.dir/main.cpp.o -o demo_singular-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Scanning dependencies of target demo_auto-adaptive-navier-stokes make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/build.make demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/build -Scanning dependencies of target demo_block-matrix -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 80%] Building CXX object demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/auto-adaptive-navier-stokes/cpp/main.cpp" -[ 80%] Built target demo_singular-poisson -make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend +[ 80%] Built target demo_nonmatching-interpolation +make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/conditional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/DependInfo.cmake" --color= -[ 80%] Building CXX object demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_block-matrix.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/block-matrix/cpp/main.cpp" -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend.internal". -Scanning dependencies of target demo_conditional +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/block-matrix/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/DependInfo.cmake" --color= +[ 80%] Linking CXX executable demo_eigenvalue +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/eigenvalue/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_eigenvalue.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_eigenvalue.dir/main.cpp.o -o demo_eigenvalue ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend.internal". +Scanning dependencies of target demo_block-matrix make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build +make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 80%] Building CXX object demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_block-matrix.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/block-matrix/cpp/main.cpp" [ 80%] Linking CXX executable demo_bcs cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/bcs/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_bcs.dir/link.txt --verbose=1 -[ 80%] Building CXX object demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_conditional.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/conditional/cpp/main.cpp" /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_bcs.dir/main.cpp.o -o demo_bcs ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 80%] Built target demo_bcs +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 80%] Built target demo_eigenvalue +make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend +[ 80%] Built target demo_singular-poisson +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/conditional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/DependInfo.cmake" --color= make -f demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/build.make demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-snes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/DependInfo.cmake" --color= +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/depend.internal". Scanning dependencies of target demo_contact-vi-snes @@ -7537,14 +7564,14 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 80%] Building CXX object demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-snes/cpp/main.cpp" -[ 80%] Linking CXX executable demo_hyperelasticity -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -o demo_hyperelasticity ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 80%] Linking CXX executable demo_mixed-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_mixed-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -o demo_mixed-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +Scanning dependencies of target demo_conditional make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 80%] Built target demo_hyperelasticity +make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 80%] Building CXX object demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_conditional.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/conditional/cpp/main.cpp" +[ 80%] Built target demo_bcs make -f demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build.make demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-tao/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-tao/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/DependInfo.cmake" --color= @@ -7554,10 +7581,13 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build.make demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 80%] Building CXX object demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-tao/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/contact-vi-tao/cpp/main.cpp" -[ 80%] Built target demo_mixed-poisson +[ 80%] Linking CXX executable demo_hyperelasticity +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/hyperelasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -o demo_hyperelasticity ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 80%] Built target demo_hyperelasticity make -f demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build.make demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/curl-curl/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/curl-curl/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/DependInfo.cmake" --color= @@ -7572,6 +7602,9 @@ [ 81%] Linking CXX executable demo_biharmonic cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/biharmonic/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_biharmonic.dir/main.cpp.o -o demo_biharmonic ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 81%] Linking CXX executable demo_mixed-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/mixed-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_mixed-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_mixed-poisson.dir/main.cpp.o -o demo_mixed-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 81%] Built target demo_biharmonic make -f demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build.make demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/depend @@ -7579,12 +7612,25 @@ cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/depend.internal". +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 81%] Built target demo_mixed-poisson +make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/DependInfo.cmake" --color= +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend.internal". Scanning dependencies of target demo_dg-advection-diffusion make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build.make demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 82%] Building CXX object demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-advection-diffusion/cpp/main.cpp" +Scanning dependencies of target demo_dg-poisson +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 82%] Building CXX object demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_dg-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-poisson/cpp/main.cpp" [ 83%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/documented/cahn-hilliard/cpp/main.cpp" [ 83%] Linking CXX executable demo_ale @@ -7595,19 +7641,6 @@ /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_subdomains.dir/main.cpp.o -o demo_subdomains ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 84%] Built target demo_ale -make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/DependInfo.cmake" --color= -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend.internal". -Scanning dependencies of target demo_dg-poisson -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 84%] Building CXX object demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_dg-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/dg-poisson/cpp/main.cpp" -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 84%] Built target demo_subdomains make -f demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/build.make demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elasticity/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/DependInfo.cmake" --color= @@ -7619,27 +7652,24 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 84%] Building CXX object demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elasticity/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_elasticity.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elasticity/cpp/main.cpp" -[ 84%] Linking CXX executable demo_curl-curl -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/curl-curl/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_curl-curl.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_curl-curl.dir/main.cpp.o -o demo_curl-curl ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 84%] Built target demo_curl-curl +[ 84%] Built target demo_subdomains make -f demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/build.make demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elastodynamics/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/DependInfo.cmake" --color= +[ 84%] Linking CXX executable demo_stokes-iterative Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/depend.internal". +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-iterative.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -o demo_stokes-iterative ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Scanning dependencies of target demo_elastodynamics make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/build.make demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 84%] Building CXX object demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_elastodynamics.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/elastodynamics/cpp/main.cpp" -[ 85%] Linking CXX executable demo_auto-adaptive-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_auto-adaptive-poisson.dir/main.cpp.o -o demo_auto-adaptive-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 85%] Built target demo_auto-adaptive-poisson +[ 84%] Built target demo_stokes-iterative make -f demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/build.make demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/eval/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/eval/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/DependInfo.cmake" --color= @@ -7649,13 +7679,16 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/build.make demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 85%] Building CXX object demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/main.cpp.o +[ 84%] Building CXX object demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/eval/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_eval.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/eval/cpp/main.cpp" -[ 85%] Linking CXX executable demo_block-matrix -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_block-matrix.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_block-matrix.dir/main.cpp.o -o demo_block-matrix ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 84%] Linking CXX executable demo_curl-curl +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/curl-curl/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_curl-curl.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_curl-curl.dir/main.cpp.o -o demo_curl-curl ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 85%] Linking CXX executable demo_auto-adaptive-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/auto-adaptive-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_auto-adaptive-poisson.dir/main.cpp.o -o demo_auto-adaptive-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 85%] Built target demo_block-matrix +[ 85%] Built target demo_curl-curl make -f demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/build.make demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/extrapolation/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/extrapolation/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/DependInfo.cmake" --color= @@ -7667,14 +7700,11 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 85%] Building CXX object demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/extrapolation/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_extrapolation.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/extrapolation/cpp/main.cpp" -[ 86%] Linking CXX executable demo_conditional -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_conditional.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_conditional.dir/main.cpp.o -o demo_conditional ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 87%] Linking CXX executable demo_contact-vi-tao -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-tao/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-tao.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -o demo_contact-vi-tao ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 85%] Linking CXX executable demo_block-matrix +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/block-matrix/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_block-matrix.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_block-matrix.dir/main.cpp.o -o demo_block-matrix ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 87%] Built target demo_conditional +[ 85%] Built target demo_auto-adaptive-poisson make -f demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build.make demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/functional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/functional/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/DependInfo.cmake" --color= @@ -7684,10 +7714,10 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build.make demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 87%] Built target demo_contact-vi-tao -[ 88%] Building CXX object demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/main.cpp.o +[ 86%] Building CXX object demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/functional/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_functional.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/functional/cpp/main.cpp" +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 86%] Built target demo_block-matrix make -f demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build.make demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/gmg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/gmg-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/DependInfo.cmake" --color= @@ -7697,11 +7727,17 @@ make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build.make demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 88%] Building CXX object demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/main.cpp.o +[ 86%] Building CXX object demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/gmg-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/gmg-poisson/cpp/main.cpp" -[ 88%] Linking CXX executable demo_contact-vi-snes +[ 86%] Linking CXX executable demo_contact-vi-snes cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-snes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-snes.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o -o demo_contact-vi-snes ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 87%] Linking CXX executable demo_conditional +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/conditional/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_conditional.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_conditional.dir/main.cpp.o -o demo_conditional ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_contact-vi-tao +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/contact-vi-tao/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-tao.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -o demo_contact-vi-tao ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 88%] Built target demo_contact-vi-snes make -f demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/build.make demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/depend @@ -7715,11 +7751,8 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 88%] Building CXX object demo/undocumented/lift-drag/cpp/CMakeFiles/demo_lift-drag.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/lift-drag/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_lift-drag.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/lift-drag/cpp/main.cpp" -[ 88%] Linking CXX executable demo_cahn-hilliard -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_cahn-hilliard.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -o demo_cahn-hilliard ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 88%] Built target demo_cahn-hilliard +[ 88%] Built target demo_conditional make -f demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/build.make demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/mesh-quality/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/mesh-quality/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/DependInfo.cmake" --color= @@ -7731,75 +7764,72 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 88%] Building CXX object demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/mesh-quality/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_mesh-quality.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/mesh-quality/cpp/main.cpp" -[ 88%] Linking CXX executable demo_stokes-iterative -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-iterative/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-iterative.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -o demo_stokes-iterative ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 88%] Built target demo_stokes-iterative +[ 88%] Built target demo_contact-vi-tao make -f demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/build.make demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/meshfunction-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/DependInfo.cmake" --color= -[ 88%] Linking CXX executable demo_stokes-taylor-hood -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-taylor-hood.dir/link.txt --verbose=1 Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend.internal". -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -o demo_stokes-taylor-hood ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Scanning dependencies of target demo_meshfunction-refinement make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/build.make demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 88%] Building CXX object demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/meshfunction-refinement/cpp/main.cpp" -[ 88%] Linking CXX executable demo_navier-stokes -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_navier-stokes.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_navier-stokes.dir/main.cpp.o -o demo_navier-stokes ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_cahn-hilliard +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/cahn-hilliard/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_cahn-hilliard.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -o demo_cahn-hilliard ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_dg-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_dg-poisson.dir/main.cpp.o -o demo_dg-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 88%] Linking CXX executable demo_stokes-taylor-hood +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/stokes-taylor-hood/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-taylor-hood.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -o demo_stokes-taylor-hood ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 88%] Built target demo_stokes-taylor-hood +[ 88%] Built target demo_cahn-hilliard make -f demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/build.make demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/depend.internal". +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 88%] Built target demo_dg-poisson +make -f demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build.make demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/depend +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/DependInfo.cmake" --color= Scanning dependencies of target demo_multimesh-poisson make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/build.make demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 89%] Building CXX object demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-poisson/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 89%] Built target demo_navier-stokes -make -f demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build.make demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/depend.internal". -Scanning dependencies of target demo_multimesh-stokes -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build.make demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 89%] Building CXX object demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-stokes/cpp/main.cpp" -[ 89%] Linking CXX executable demo_advection-diffusion -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_advection-diffusion.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -o demo_advection-diffusion ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 89%] Built target demo_advection-diffusion +[ 88%] Built target demo_stokes-taylor-hood make -f demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/build.make demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/nonmatching-projection/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/DependInfo.cmake" --color= +[ 89%] Building CXX object demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-poisson/cpp/main.cpp" Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/depend.internal". Scanning dependencies of target demo_nonmatching-projection make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/build.make demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +Scanning dependencies of target demo_multimesh-stokes [ 89%] Building CXX object demo/undocumented/nonmatching-projection/cpp/CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/nonmatching-projection/cpp/main.cpp" -[ 89%] Linking CXX executable demo_dg-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_dg-poisson.dir/main.cpp.o -o demo_dg-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 89%] Built target demo_dg-poisson +make -f demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build.make demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 89%] Building CXX object demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/multimesh-stokes/cpp/main.cpp" +[ 89%] Linking CXX executable demo_navier-stokes +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/documented/navier-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_navier-stokes.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_navier-stokes.dir/main.cpp.o -o demo_navier-stokes ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 89%] Built target demo_navier-stokes make -f demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/build.make demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/parallel-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parallel-refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/DependInfo.cmake" --color= @@ -7811,11 +7841,11 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 90%] Building CXX object demo/undocumented/parallel-refinement/cpp/CMakeFiles/demo_parallel-refinement.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parallel-refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_parallel-refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/parallel-refinement/cpp/main.cpp" -[ 90%] Linking CXX executable demo_extrapolation -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/extrapolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_extrapolation.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_extrapolation.dir/main.cpp.o -o demo_extrapolation ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 90%] Linking CXX executable demo_advection-diffusion +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/advection-diffusion/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_advection-diffusion.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -o demo_advection-diffusion ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 90%] Built target demo_extrapolation +[ 90%] Built target demo_advection-diffusion make -f demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/build.make demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/parameters/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parameters/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/DependInfo.cmake" --color= @@ -7843,14 +7873,14 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 90%] Building CXX object demo/undocumented/poisson1D/cpp/CMakeFiles/demo_poisson1D.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson1D/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson1D.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D/cpp/main.cpp" -[ 91%] Linking CXX executable demo_lift-drag -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/lift-drag/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_lift-drag.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_lift-drag.dir/main.cpp.o -o demo_lift-drag ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 91%] Linking CXX executable demo_functional -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/functional/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_functional.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_functional.dir/main.cpp.o -o demo_functional ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 91%] Linking CXX executable demo_meshfunction-refinement +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_meshfunction-refinement.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -o demo_meshfunction-refinement ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 91%] Linking CXX executable demo_extrapolation +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/extrapolation/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_extrapolation.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_extrapolation.dir/main.cpp.o -o demo_extrapolation ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 91%] Built target demo_lift-drag +[ 91%] Built target demo_meshfunction-refinement make -f demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/build.make demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D-in-2D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson1D-in-2D/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/DependInfo.cmake" --color= @@ -7863,7 +7893,7 @@ [ 91%] Building CXX object demo/undocumented/poisson1D-in-2D/cpp/CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson1D-in-2D/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson1D-in-2D/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 91%] Built target demo_functional +[ 91%] Built target demo_extrapolation make -f demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/build.make demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson-disc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson-disc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/DependInfo.cmake" --color= @@ -7875,91 +7905,97 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 91%] Building CXX object demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson-disc/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson-disc.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/poisson-disc/cpp/main.cpp" -[ 91%] Linking CXX executable demo_gmg-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/gmg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_gmg-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -o demo_gmg-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 92%] Linking CXX executable demo_elasticity -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elasticity.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elasticity.dir/main.cpp.o -o demo_elasticity ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 93%] Linking CXX executable demo_eval +[ 92%] Linking CXX executable demo_eval cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/eval/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_eval.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_eval.dir/main.cpp.o -o demo_eval ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 94%] Linking CXX executable demo_meshfunction-refinement -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/meshfunction-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_meshfunction-refinement.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -o demo_meshfunction-refinement ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 92%] Linking CXX executable demo_functional +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/functional/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_functional.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_functional.dir/main.cpp.o -o demo_functional ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 94%] Built target demo_gmg-poisson +[ 92%] Built target demo_eval make -f demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build.make demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/DependInfo.cmake" --color= -[ 94%] Linking CXX executable demo_elastodynamics -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elastodynamics.dir/link.txt --verbose=1 Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/depend.internal". -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elastodynamics.dir/main.cpp.o -o demo_elastodynamics ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +Scanning dependencies of target demo_refinement +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +make -f demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build.make demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 93%] Building CXX object demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/refinement/cpp/main.cpp" make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 94%] Built target demo_elasticity +[ 93%] Built target demo_functional make -f demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build.make demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/spatial-coordinates/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/depend.internal". -Scanning dependencies of target demo_refinement -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build.make demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 95%] Building CXX object demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_refinement.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/refinement/cpp/main.cpp" Scanning dependencies of target demo_spatial-coordinates make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build.make demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 96%] Building CXX object demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o +[ 94%] Building CXX object demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/spatial-coordinates/cpp/main.cpp" +[ 94%] Linking CXX executable demo_gmg-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/gmg-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_gmg-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -o demo_gmg-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 95%] Linking CXX executable demo_elasticity +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elasticity/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elasticity.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elasticity.dir/main.cpp.o -o demo_elasticity ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 96%] Built target demo_elastodynamics +[ 95%] Built target demo_gmg-poisson make -f demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build.make demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/submesh/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/DependInfo.cmake" --color= -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/depend.internal". +Scanning dependencies of target demo_submesh make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 96%] Built target demo_meshfunction-refinement +make -f demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build.make demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 95%] Building CXX object demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_submesh.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/submesh/cpp/main.cpp" +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 95%] Built target demo_elasticity make -f demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build.make demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend -[ 96%] Built target demo_eval make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/sym-dirichlet-bc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/DependInfo.cmake" --color= -make -f demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build.make demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/time-series/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/DependInfo.cmake" --color= Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend.internal". Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend.internal". -Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend.internal". -Scanning dependencies of target demo_submesh -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -make -f demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build.make demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build -make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 96%] Building CXX object demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_submesh.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/submesh/cpp/main.cpp" +[ 96%] Linking CXX executable demo_lift-drag +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/lift-drag/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_lift-drag.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_lift-drag.dir/main.cpp.o -o demo_lift-drag ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so Scanning dependencies of target demo_sym-dirichlet-bc make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build.make demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 96%] Building CXX object demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/sym-dirichlet-bc/cpp/main.cpp" +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 96%] Built target demo_lift-drag +make -f demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build.make demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend +make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/time-series/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/DependInfo.cmake" --color= +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/DependInfo.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend.internal". +Dependee "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend.internal". Scanning dependencies of target demo_time-series make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make -f demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build.make demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 96%] Building CXX object demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/sym-dirichlet-bc/cpp/main.cpp" [ 96%] Building CXX object demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_time-series.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/time-series/cpp/main.cpp" +[ 96%] Linking CXX executable demo_elastodynamics +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/elastodynamics/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elastodynamics.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_elastodynamics.dir/main.cpp.o -o demo_elastodynamics ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 96%] Linking CXX executable demo_parallel-refinement +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parallel-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_parallel-refinement.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_parallel-refinement.dir/main.cpp.o -o demo_parallel-refinement ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [ 96%] Linking CXX executable demo_dg-advection-diffusion cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/dg-advection-diffusion/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-advection-diffusion.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o -o demo_dg-advection-diffusion ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 96%] Built target demo_dg-advection-diffusion +[ 96%] Built target demo_elastodynamics make -f demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/build.make demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/depend make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/dolfin-2019.2.0~git20201207.b495043" "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/waveguide/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/waveguide/cpp" "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/DependInfo.cmake" --color= @@ -7971,71 +8007,70 @@ make[8]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 97%] Building CXX object demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/main.cpp.o cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/waveguide/cpp" && /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -I"/build/dolfin-2019.2.0~git20201207.b495043" -I"/build/dolfin-2019.2.0~git20201207.b495043/dolfin" -I"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_waveguide.dir/main.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/demo/undocumented/waveguide/cpp/main.cpp" -[ 97%] Linking CXX executable demo_multimesh-poisson -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-poisson.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -o demo_multimesh-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 97%] Built target demo_multimesh-poisson -[ 97%] Linking CXX executable demo_parallel-refinement -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parallel-refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_parallel-refinement.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_parallel-refinement.dir/main.cpp.o -o demo_parallel-refinement ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 97%] Built target demo_parallel-refinement +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 97%] Built target demo_dg-advection-diffusion [ 97%] Linking CXX executable demo_parameters cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/parameters/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_parameters.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_parameters.dir/main.cpp.o -o demo_parameters ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 97%] Built target demo_parameters +[ 97%] Linking CXX executable demo_multimesh-poisson +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-poisson/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-poisson.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -o demo_multimesh-poisson ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 97%] Built target demo_multimesh-poisson [ 98%] Linking CXX executable demo_poisson1D cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson1D/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson1D.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson1D.dir/main.cpp.o -o demo_poisson1D ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 98%] Linking CXX executable demo_submesh -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_submesh.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_submesh.dir/main.cpp.o -o demo_submesh ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 98%] Built target demo_poisson1D -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 98%] Built target demo_submesh +[ 98%] Linking CXX executable demo_nonmatching-projection +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-projection.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o -o demo_nonmatching-projection ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [ 98%] Linking CXX executable demo_poisson1D-in-2D cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson1D-in-2D/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson1D-in-2D.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -o demo_poisson1D-in-2D ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [ 98%] Linking CXX executable demo_refinement cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/refinement/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_refinement.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_refinement.dir/main.cpp.o -o demo_refinement ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -[ 98%] Linking CXX executable demo_time-series -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_time-series.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_time-series.dir/main.cpp.o -o demo_time-series ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 98%] Built target demo_refinement +[ 98%] Built target demo_nonmatching-projection +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 98%] Built target demo_poisson1D-in-2D +[ 98%] Built target demo_refinement +[ 98%] Linking CXX executable demo_submesh +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/submesh/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_submesh.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_submesh.dir/main.cpp.o -o demo_submesh ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 98%] Built target demo_time-series -[ 98%] Linking CXX executable demo_nonmatching-projection -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/nonmatching-projection/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-projection.dir/link.txt --verbose=1 -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o -o demo_nonmatching-projection ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +[ 98%] Built target demo_submesh +[ 98%] Linking CXX executable demo_time-series +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/time-series/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_time-series.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_time-series.dir/main.cpp.o -o demo_time-series ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 98%] Built target demo_nonmatching-projection +[ 98%] Built target demo_time-series [ 98%] Linking CXX executable demo_poisson-disc cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/poisson-disc/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson-disc.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_poisson-disc.dir/main.cpp.o -o demo_poisson-disc ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[ 98%] Built target demo_poisson-disc [ 98%] Linking CXX executable demo_spatial-coordinates cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/spatial-coordinates/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_spatial-coordinates.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o -o demo_spatial-coordinates ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[ 98%] Built target demo_poisson-disc -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [ 98%] Built target demo_spatial-coordinates +[ 98%] Linking CXX executable demo_multimesh-stokes +cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-stokes.dir/link.txt --verbose=1 +/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -o demo_multimesh-stokes ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [100%] Linking CXX executable demo_sym-dirichlet-bc cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/sym-dirichlet-bc/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_sym-dirichlet-bc.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -o demo_sym-dirichlet-bc ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' -[100%] Linking CXX executable demo_multimesh-stokes -cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/multimesh-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-stokes.dir/link.txt --verbose=1 -[100%] Built target demo_sym-dirichlet-bc -/usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -o demo_multimesh-stokes ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' [100%] Built target demo_multimesh-stokes +make[8]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' +[100%] Built target demo_sym-dirichlet-bc [100%] Linking CXX executable demo_auto-adaptive-navier-stokes cd "/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64/demo/undocumented/auto-adaptive-navier-stokes/cpp" && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-navier-stokes.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-z,relro CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -o demo_auto-adaptive-navier-stokes ../../../../dolfin/libdolfin64.so.2019.2.0.dev0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/lib/libslepc64_real.so /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/libpetsc64_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so @@ -8058,11 +8093,11 @@ Run C++ 64-bit unit tests (serial) Test project /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 Start 1: unittests -1/1 Test #1: unittests ........................ Passed 3.91 sec +1/1 Test #1: unittests ........................ Passed 4.05 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 3.92 sec +Total Test time (real) = 4.06 sec Run C++ 64-bit regressions tests (serial) Test project /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 Start 3: demo_auto-adaptive-poisson_serial @@ -8080,89 +8115,89 @@ Start 28: demo_singular-poisson_serial Start 31: demo_stokes-taylor-hood_serial Start 33: demo_subdomains_serial - 1/47 Test #9: demo_built-in-meshes_serial ............... Passed 1.15 sec Start 35: demo_advection-diffusion_serial - 2/47 Test #26: demo_poisson_serial ....................... Passed 1.17 sec + 1/47 Test #9: demo_built-in-meshes_serial ............... Passed 1.41 sec Start 37: demo_ale_serial - 3/47 Test #24: demo_periodic_serial ...................... Passed 1.21 sec + 2/47 Test #20: demo_nonlinear-poisson_serial ............. Passed 1.37 sec Start 39: demo_auto-adaptive-navier-stokes_serial - 4/47 Test #20: demo_nonlinear-poisson_serial ............. Passed 1.31 sec + 3/47 Test #26: demo_poisson_serial ....................... Passed 1.48 sec Start 41: demo_block-matrix_serial - 5/47 Test #7: demo_biharmonic_serial .................... Passed 1.48 sec + 4/47 Test #24: demo_periodic_serial ...................... Passed 1.51 sec Start 43: demo_conditional_serial - 6/47 Test #22: demo_nonmatching-interpolation_serial ..... Passed 1.44 sec + 5/47 Test #22: demo_nonmatching-interpolation_serial ..... Passed 1.54 sec Start 45: demo_contact-vi-snes_serial - 7/47 Test #18: demo_neumann-poisson_serial ............... Passed 1.48 sec + 6/47 Test #18: demo_neumann-poisson_serial ............... Passed 1.60 sec Start 47: demo_contact-vi-tao_serial - 8/47 Test #14: demo_mixed-poisson_serial ................. Passed 1.52 sec + 7/47 Test #14: demo_mixed-poisson_serial ................. Passed 1.68 sec Start 50: demo_dg-advection-diffusion_serial - 9/47 Test #33: demo_subdomains_serial .................... Passed 1.42 sec + 8/47 Test #7: demo_biharmonic_serial .................... Passed 1.81 sec Start 52: demo_dg-poisson_serial -10/47 Test #28: demo_singular-poisson_serial .............. Passed 1.86 sec + 9/47 Test #33: demo_subdomains_serial .................... Passed 1.74 sec Start 54: demo_elasticity_serial -11/47 Test #12: demo_eigenvalue_serial .................... Passed 2.03 sec +10/47 Test #37: demo_ale_serial ........................... Passed 1.20 sec Start 55: demo_elastodynamics_serial -12/47 Test #37: demo_ale_serial ........................... Passed 1.17 sec +11/47 Test #12: demo_eigenvalue_serial .................... Passed 2.66 sec Start 57: demo_eval_serial -13/47 Test #41: demo_block-matrix_serial .................. Passed 1.12 sec +12/47 Test #28: demo_singular-poisson_serial .............. Passed 2.60 sec Start 59: demo_extrapolation_serial -14/47 Test #52: demo_dg-poisson_serial .................... Passed 1.11 sec +13/47 Test #41: demo_block-matrix_serial .................. Passed 1.14 sec Start 61: demo_functional_serial -15/47 Test #5: demo_bcs_serial ........................... Passed 2.71 sec +14/47 Test #5: demo_bcs_serial ........................... Passed 2.82 sec Start 63: demo_gmg-poisson_serial -16/47 Test #31: demo_stokes-taylor-hood_serial ............ Passed 3.11 sec +15/47 Test #52: demo_dg-poisson_serial .................... Passed 1.09 sec Start 65: demo_lift-drag_serial -17/47 Test #43: demo_conditional_serial ................... Passed 2.02 sec +16/47 Test #43: demo_conditional_serial ................... Passed 1.86 sec Start 67: demo_mesh-quality_serial -18/47 Test #47: demo_contact-vi-tao_serial ................ Passed 2.00 sec +17/47 Test #31: demo_stokes-taylor-hood_serial ............ Passed 3.36 sec Start 69: demo_meshfunction-refinement_serial -19/47 Test #59: demo_extrapolation_serial ................. Passed 1.15 sec +18/47 Test #50: demo_dg-advection-diffusion_serial ........ Passed 2.01 sec Start 71: demo_multimesh-poisson_serial -20/47 Test #45: demo_contact-vi-snes_serial ............... Passed 2.14 sec +19/47 Test #35: demo_advection-diffusion_serial ........... Passed 3.69 sec Start 73: demo_multimesh-stokes_serial -21/47 Test #61: demo_functional_serial .................... Passed 1.12 sec +20/47 Test #47: demo_contact-vi-tao_serial ................ Passed 2.23 sec Start 75: demo_nonmatching-projection_serial -22/47 Test #35: demo_advection-diffusion_serial ........... Passed 2.71 sec +21/47 Test #59: demo_extrapolation_serial ................. Passed 1.21 sec Start 77: demo_parallel-refinement_serial -23/47 Test #63: demo_gmg-poisson_serial ................... Passed 1.38 sec +22/47 Test #61: demo_functional_serial .................... Passed 1.24 sec Start 79: demo_parameters_serial -24/47 Test #50: demo_dg-advection-diffusion_serial ........ Passed 2.54 sec +23/47 Test #65: demo_lift-drag_serial ..................... Passed 1.32 sec Start 81: demo_poisson1D_serial -25/47 Test #65: demo_lift-drag_serial ..................... Passed 1.31 sec +24/47 Test #63: demo_gmg-poisson_serial ................... Passed 1.53 sec Start 83: demo_poisson1D-in-2D_serial -26/47 Test #57: demo_eval_serial .......................... Passed 2.22 sec +25/47 Test #67: demo_mesh-quality_serial .................. Passed 1.17 sec Start 85: demo_poisson-disc_serial -27/47 Test #67: demo_mesh-quality_serial .................. Passed 1.22 sec +26/47 Test #69: demo_meshfunction-refinement_serial ....... Passed 1.22 sec Start 87: demo_refinement_serial -28/47 Test #69: demo_meshfunction-refinement_serial ....... Passed 1.28 sec +27/47 Test #45: demo_contact-vi-snes_serial ............... Passed 3.26 sec Start 89: demo_spatial-coordinates_serial -29/47 Test #77: demo_parallel-refinement_serial ........... Passed 1.20 sec +28/47 Test #16: demo_navier-stokes_serial ................. Passed 5.02 sec Start 91: demo_submesh_serial -30/47 Test #79: demo_parameters_serial .................... Passed 1.17 sec +29/47 Test #57: demo_eval_serial .......................... Passed 2.43 sec Start 93: demo_sym-dirichlet-bc_serial -31/47 Test #81: demo_poisson1D_serial ..................... Passed 1.22 sec +30/47 Test #79: demo_parameters_serial .................... Passed 1.18 sec Start 95: demo_time-series_serial -32/47 Test #83: demo_poisson1D-in-2D_serial ............... Passed 1.27 sec +31/47 Test #77: demo_parallel-refinement_serial ........... Passed 1.25 sec Start 97: demo_waveguide_serial -33/47 Test #73: demo_multimesh-stokes_serial .............. Passed 2.20 sec -34/47 Test #87: demo_refinement_serial .................... Passed 1.19 sec -35/47 Test #89: demo_spatial-coordinates_serial ........... Passed 1.16 sec -36/47 Test #75: demo_nonmatching-projection_serial ........ Passed 2.19 sec -37/47 Test #91: demo_submesh_serial ....................... Passed 0.98 sec -38/47 Test #16: demo_navier-stokes_serial ................. Passed 6.21 sec -39/47 Test #85: demo_poisson-disc_serial .................. Passed 1.62 sec -40/47 Test #95: demo_time-series_serial ................... Passed 1.21 sec -41/47 Test #97: demo_waveguide_serial ..................... Passed 1.48 sec -42/47 Test #71: demo_multimesh-poisson_serial ............. Passed 5.21 sec -43/47 Test #93: demo_sym-dirichlet-bc_serial .............. Passed 5.04 sec -44/47 Test #3: demo_auto-adaptive-poisson_serial ......... Passed 10.44 sec -45/47 Test #54: demo_elasticity_serial .................... Passed 11.25 sec -46/47 Test #39: demo_auto-adaptive-navier-stokes_serial ... Passed 27.59 sec -47/47 Test #55: demo_elastodynamics_serial ................ Passed 29.38 sec +32/47 Test #81: demo_poisson1D_serial ..................... Passed 1.12 sec +33/47 Test #83: demo_poisson1D-in-2D_serial ............... Passed 1.10 sec +34/47 Test #87: demo_refinement_serial .................... Passed 1.05 sec +35/47 Test #89: demo_spatial-coordinates_serial ........... Passed 1.00 sec +36/47 Test #73: demo_multimesh-stokes_serial .............. Passed 2.07 sec +37/47 Test #75: demo_nonmatching-projection_serial ........ Passed 2.06 sec +38/47 Test #91: demo_submesh_serial ....................... Passed 1.06 sec +39/47 Test #85: demo_poisson-disc_serial .................. Passed 1.56 sec +40/47 Test #95: demo_time-series_serial ................... Passed 1.22 sec +41/47 Test #97: demo_waveguide_serial ..................... Passed 1.47 sec +42/47 Test #71: demo_multimesh-poisson_serial ............. Passed 3.96 sec +43/47 Test #3: demo_auto-adaptive-poisson_serial ......... Passed 9.50 sec +44/47 Test #93: demo_sym-dirichlet-bc_serial .............. Passed 4.91 sec +45/47 Test #54: demo_elasticity_serial .................... Passed 10.58 sec +46/47 Test #39: demo_auto-adaptive-navier-stokes_serial ... Passed 25.13 sec +47/47 Test #55: demo_elastodynamics_serial ................ Passed 26.57 sec 100% tests passed, 0 tests failed out of 47 -Total Test time (real) = 31.48 sec +Total Test time (real) = 29.23 sec Run C++ 64-bit regression tests (MPI) Test project /build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64 Start 2: demo_auto-adaptive-poisson_mpi @@ -8170,15 +8205,20 @@ Start 6: demo_biharmonic_mpi Start 8: demo_built-in-meshes_mpi Start 10: demo_cahn-hilliard_mpi - 1/49 Test #6: demo_biharmonic_mpi ....................***Failed 0.56 sec -Process 0: Solving linear variational problem. + Start 11: demo_eigenvalue_mpi + 1/49 Test #2: demo_auto-adaptive-poisson_mpi ......... Passed 0.70 sec + Start 13: demo_mixed-poisson_mpi + 2/49 Test #8: demo_built-in-meshes_mpi ............... Passed 0.86 sec + Start 15: demo_navier-stokes_mpi + 3/49 Test #11: demo_eigenvalue_mpi .................... Passed 1.12 sec + Start 17: demo_neumann-poisson_mpi + 4/49 Test #4: demo_bcs_mpi ...........................***Failed 1.24 sec Process 1: Solving linear variational problem. Process 2: Solving linear variational problem. - Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 0: Solving linear variational problem. Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -terminate called after throwing an instance of 'std::runtime_error' -terminate called after throwing an instance of 'std::runtime_error' + Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -8195,12 +8235,16 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 1 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- +[i-capture-the-hostname:451874] *** Process received signal *** +[i-capture-the-hostname:451874] Signal: Aborted (6) +[i-capture-the-hostname:451874] Signal code: (-6) +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -8216,12 +8260,16 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- +[i-capture-the-hostname:451908] *** Process received signal *** +[i-capture-the-hostname:451908] Signal: Aborted (6) +[i-capture-the-hostname:451908] Signal code: (-6) +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -8237,92 +8285,79 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 1 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65589] *** Process received signal *** -[ionos1-amd64:65590] *** Process received signal *** -[ionos1-amd64:65585] *** Process received signal *** -[ionos1-amd64:65589] Signal: Aborted (6) -[ionos1-amd64:65589] Signal code: (-6) -[ionos1-amd64:65585] Signal: Aborted (6) -[ionos1-amd64:65585] Signal code: (-6) -[ionos1-amd64:65590] Signal: Aborted (6) -[ionos1-amd64:65590] Signal code: (-6) -[ionos1-amd64:65589] [ 0] [ionos1-amd64:65585] [ 0] [ionos1-amd64:65590] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fe015df3d60] -[ionos1-amd64:65585] [ 1] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fbbf5f0bd60] -[ionos1-amd64:65589] [ 1] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fb3a6dbbd60] -[ionos1-amd64:65590] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fb3a6dbbce1] -[ionos1-amd64:65590] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fbbf5f0bce1] -[ionos1-amd64:65589] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fe015df3ce1] -[ionos1-amd64:65585] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fbbf5ef5537] -[ionos1-amd64:65589] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fe015ddd537] -[ionos1-amd64:65585] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fb3a6da5537] -[ionos1-amd64:65590] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fe0161827ec] -[ionos1-amd64:65585] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fbbf629a7ec] -[ionos1-amd64:65589] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fb3a714a7ec] -[ionos1-amd64:65590] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fbbf62a5966] -[ionos1-amd64:65589] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fe01618d966] -[ionos1-amd64:65585] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fb3a7155966] -[ionos1-amd64:65590] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fb3a71559d1] -[ionos1-amd64:65590] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fe01618d9d1] -[ionos1-amd64:65585] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fbbf62a59d1] -[ionos1-amd64:65589] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fb3a7155c65] -[ionos1-amd64:65590] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fe01618dc65] -[ionos1-amd64:65585] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fbbf62a5c65] -[ionos1-amd64:65589] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fbbf6682813] -[ionos1-amd64:65589] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fe01656a813] -[ionos1-amd64:65585] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fb3a7532813] -[ionos1-amd64:65590] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fbbf69b59fe] -[ionos1-amd64:65589] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fe01689d9fe] -[ionos1-amd64:65585] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fb3a78659fe] -[ionos1-amd64:65590] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fe0168819cf] -[ionos1-amd64:65585] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fbbf69999cf] -[ionos1-amd64:65589] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fb3a78499cf] -[ionos1-amd64:65590] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fbbf69860b7] -[ionos1-amd64:65589] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fe01686e0b7] -[ionos1-amd64:65585] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fb3a78360b7] -[ionos1-amd64:65590] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fbbf697c132] -[ionos1-amd64:65589] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fb3a782c132] -[ionos1-amd64:65590] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fe016864132] -[ionos1-amd64:65585] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fe016633fa9] -[ionos1-amd64:65585] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fb3a75fbfa9] -[ionos1-amd64:65590] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fbbf674bfa9] -[ionos1-amd64:65589] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fe016681bb2] -[ionos1-amd64:65585] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fb3a7649bb2] -[ionos1-amd64:65590] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fbbf6799bb2] -[ionos1-amd64:65589] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fb3a764b790] -[ionos1-amd64:65590] [15] ./demo_biharmonic(+0x8a39)[0x556f046bea39] -[ionos1-amd64:65590] [16] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fe016683790] -[ionos1-amd64:65585] [15] ./demo_biharmonic(+0x8a39)[0x5634867d8a39] -[ionos1-amd64:65585] [16] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fbbf679b790] -[ionos1-amd64:65589] [15] ./demo_biharmonic(+0x8a39)[0x5631100f3a39] -[ionos1-amd64:65589] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fe015dded0a] -[ionos1-amd64:65585] [17] ./demo_biharmonic(+0x8c4a)[0x5634867d8c4a] -[ionos1-amd64:65585] *** End of error message *** -/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fb3a6da6d0a] -[ionos1-amd64:65590] [17] ./demo_biharmonic(+0x8c4a)[0x556f046bec4a] -[ionos1-amd64:65590] *** End of error message *** -/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fbbf5ef6d0a] -[ionos1-amd64:65589] [17] ./demo_biharmonic(+0x8c4a)[0x5631100f3c4a] -[ionos1-amd64:65589] *** End of error message *** +[i-capture-the-hostname:451893] *** Process received signal *** +[i-capture-the-hostname:451893] Signal: Aborted (6) +[i-capture-the-hostname:451893] Signal code: (-6) +[i-capture-the-hostname:451893] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7efe86f0bd60] +[i-capture-the-hostname:451893] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7efe86f0bce1] +[i-capture-the-hostname:451893] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7efe86ef5537] +[i-capture-the-hostname:451893] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7efe8729a7ec] +[i-capture-the-hostname:451893] [ 4] [i-capture-the-hostname:451874] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7efe872a5966] +[i-capture-the-hostname:451893] [ 5] [i-capture-the-hostname:451908] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f963c12bd60] +[i-capture-the-hostname:451874] [ 1] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f9e6d683d60] +[i-capture-the-hostname:451908] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f9e6d683ce1] +[i-capture-the-hostname:451908] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7efe872a59d1] +[i-capture-the-hostname:451893] [ 6] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f963c12bce1] +[i-capture-the-hostname:451874] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f963c115537] +[i-capture-the-hostname:451874] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7efe872a5c65] +[i-capture-the-hostname:451893] [ 7] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f9e6d66d537] +[i-capture-the-hostname:451908] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f9e6da127ec] +[i-capture-the-hostname:451908] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f9e6da1d966] +[i-capture-the-hostname:451908] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f9e6da1d9d1] +[i-capture-the-hostname:451908] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f9e6da1dc65] +[i-capture-the-hostname:451908] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f963c4ba7ec] +[i-capture-the-hostname:451874] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f963c4c5966] +[i-capture-the-hostname:451874] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f963c4c59d1] +[i-capture-the-hostname:451874] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f963c4c5c65] +[i-capture-the-hostname:451874] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7efe87552813] +[i-capture-the-hostname:451893] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7efe878859fe] +[i-capture-the-hostname:451893] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f963c772813] +[i-capture-the-hostname:451874] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f9e6dcca813] +[i-capture-the-hostname:451908] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7efe878699cf] +[i-capture-the-hostname:451893] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f963caa59fe] +[i-capture-the-hostname:451874] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f9e6dffd9fe] +[i-capture-the-hostname:451908] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f9e6dfe19cf] +[i-capture-the-hostname:451908] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7efe878560b7] +[i-capture-the-hostname:451893] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7efe8784c132] +[i-capture-the-hostname:451893] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f963ca899cf] +[i-capture-the-hostname:451874] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7efe8761bfa9] +[i-capture-the-hostname:451893] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f9e6dfce0b7] +[i-capture-the-hostname:451908] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7efe87669bb2] +[i-capture-the-hostname:451893] [14] ./demo_bcs(+0x6da9)[0x561462301da9] +[i-capture-the-hostname:451893] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f9e6dfc4132] +[i-capture-the-hostname:451908] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f963ca760b7] +[i-capture-the-hostname:451874] [11] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7efe86ef6d0a] +[i-capture-the-hostname:451893] [16] ./demo_bcs(+0x706a)[0x56146230206a] +[i-capture-the-hostname:451893] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f9e6dd93fa9] +[i-capture-the-hostname:451908] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f963ca6c132] +[i-capture-the-hostname:451874] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f9e6dde1bb2] +[i-capture-the-hostname:451908] [14] ./demo_bcs(+0x6da9)[0x558535e05da9] +[i-capture-the-hostname:451908] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f963c83bfa9] +[i-capture-the-hostname:451874] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f9e6d66ed0a] +[i-capture-the-hostname:451908] [16] ./demo_bcs(+0x706a)[0x558535e0606a] +[i-capture-the-hostname:451908] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f963c889bb2] +[i-capture-the-hostname:451874] [14] ./demo_bcs(+0x6da9)[0x5579a67d8da9] +[i-capture-the-hostname:451874] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f963c116d0a] +[i-capture-the-hostname:451874] [16] ./demo_bcs(+0x706a)[0x5579a67d906a] +[i-capture-the-hostname:451874] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 1 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 11: demo_eigenvalue_mpi - 2/49 Test #2: demo_auto-adaptive-poisson_mpi ......... Passed 0.60 sec - Start 13: demo_mixed-poisson_mpi - 3/49 Test #8: demo_built-in-meshes_mpi ............... Passed 0.68 sec - Start 15: demo_navier-stokes_mpi - 4/49 Test #13: demo_mixed-poisson_mpi .................***Failed 0.52 sec + Start 19: demo_nonlinear-poisson_mpi + 5/49 Test #13: demo_mixed-poisson_mpi .................***Failed 0.55 sec Process 0: Solving linear variational problem. Process 1: Solving linear variational problem. Process 2: Solving linear variational problem. @@ -8342,25 +8377,16 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65638] *** Process received signal *** -[ionos1-amd64:65638] Signal: Aborted (6) -[ionos1-amd64:65638] Signal code: (-6) -[ionos1-amd64:65638] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f03f686bd60] -[ionos1-amd64:65638] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f03f686bce1] -[ionos1-amd64:65638] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f03f6855537] -[ionos1-amd64:65638] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f03f6bfa7ec] -[ionos1-amd64:65638] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f03f6c05966] -[ionos1-amd64:65638] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f03f6c059d1] -[ionos1-amd64:65638] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f03f6c05c65] -[ionos1-amd64:65638] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f03f6fe2813] -[ionos1-amd64:65638] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f03f73159fe] -[ionos1-amd64:65638] [ 9] terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453166] *** Process received signal *** +[i-capture-the-hostname:453166] Signal: Aborted (6) +[i-capture-the-hostname:453166] Signal code: (-6) +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -8376,25 +8402,38 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 1 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65636] *** Process received signal *** -[ionos1-amd64:65636] Signal: Aborted (6) -[ionos1-amd64:65636] Signal code: (-6) -[ionos1-amd64:65636] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f0b873e3d60] -[ionos1-amd64:65636] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f0b873e3ce1] -[ionos1-amd64:65636] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f0b873cd537] -[ionos1-amd64:65636] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f0b877727ec] -[ionos1-amd64:65636] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f0b8777d966] -[ionos1-amd64:65636] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f0b8777d9d1] -[ionos1-amd64:65636] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f0b8777dc65] -[ionos1-amd64:65636] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f0b87b5a813] -[ionos1-amd64:65636] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f0b87e8d9fe] -[ionos1-amd64:65636] [ 9] terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453167] *** Process received signal *** +[i-capture-the-hostname:453167] Signal: Aborted (6) +[i-capture-the-hostname:453167] Signal code: (-6) + Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +[i-capture-the-hostname:453167] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f4380773d60] +[i-capture-the-hostname:453167] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f4380773ce1] +[i-capture-the-hostname:453167] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f438075d537] +[i-capture-the-hostname:453167] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f4380b027ec] +[i-capture-the-hostname:453167] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f4380b0d966] +[i-capture-the-hostname:453167] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f4380b0d9d1] +[i-capture-the-hostname:453167] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f4380b0dc65] +[i-capture-the-hostname:453167] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f4380eea813] +[i-capture-the-hostname:453167] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f438121d9fe] +[i-capture-the-hostname:453167] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f43812019cf] +[i-capture-the-hostname:453167] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f43811ee0b7] +[i-capture-the-hostname:453167] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f43811e4132] +[i-capture-the-hostname:453167] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f4380fb3fa9] +[i-capture-the-hostname:453167] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f4381001bb2] +[i-capture-the-hostname:453167] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f4381003790] +[i-capture-the-hostname:453167] [15] ./demo_mixed-poisson(+0x8a85)[0x5586b6dc7a85] +[i-capture-the-hostname:453167] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f438075ed0a] +[i-capture-the-hostname:453167] [17] ./demo_mixed-poisson(+0x8caa)[0x5586b6dc7caa] +[i-capture-the-hostname:453167] *** End of error message *** +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -8410,73 +8449,69 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 1 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65637] *** Process received signal *** -[ionos1-amd64:65637] Signal: Aborted (6) -[ionos1-amd64:65637] Signal code: (-6) -[ionos1-amd64:65637] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f68ed8abd60] -[ionos1-amd64:65637] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f68ed8abce1] -[ionos1-amd64:65637] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f68ed895537] -[ionos1-amd64:65637] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f68edc3a7ec] -[ionos1-amd64:65637] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f68edc45966] -[ionos1-amd64:65637] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f68edc459d1] -[ionos1-amd64:65637] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f68edc45c65] -[ionos1-amd64:65637] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f68ee022813] -[ionos1-amd64:65637] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f68ee3559fe] -[ionos1-amd64:65637] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f68ee3399cf] -[ionos1-amd64:65637] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f68ee3260b7] -[ionos1-amd64:65637] [11] Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f03f72f99cf] -[ionos1-amd64:65638] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f0b87e719cf] -[ionos1-amd64:65636] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f03f72e60b7] -[ionos1-amd64:65638] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f03f72dc132] -[ionos1-amd64:65638] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f03f70abfa9] -[ionos1-amd64:65638] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f03f70f9bb2] -[ionos1-amd64:65638] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f03f70fb790] -[ionos1-amd64:65638] [15] ./demo_mixed-poisson(+0x8a85)[0x55b110f10a85] -[ionos1-amd64:65638] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f03f6856d0a] -[ionos1-amd64:65638] [17] ./demo_mixed-poisson(+0x8caa)[0x55b110f10caa] -[ionos1-amd64:65638] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f68ee31c132] -[ionos1-amd64:65637] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f68ee0ebfa9] -[ionos1-amd64:65637] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f68ee139bb2] -[ionos1-amd64:65637] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f68ee13b790] -[ionos1-amd64:65637] [15] ./demo_mixed-poisson(+0x8a85)[0x5565bb08fa85] -[ionos1-amd64:65637] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f68ed896d0a] -[ionos1-amd64:65637] [17] ./demo_mixed-poisson(+0x8caa)[0x5565bb08fcaa] -[ionos1-amd64:65637] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f0b87e5e0b7] -[ionos1-amd64:65636] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f0b87e54132] -[ionos1-amd64:65636] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f0b87c23fa9] -[ionos1-amd64:65636] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f0b87c71bb2] -[ionos1-amd64:65636] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f0b87c73790] -[ionos1-amd64:65636] [15] ./demo_mixed-poisson(+0x8a85)[0x55d2bc0f7a85] -[ionos1-amd64:65636] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f0b873ced0a] -[ionos1-amd64:65636] [17] ./demo_mixed-poisson(+0x8caa)[0x55d2bc0f7caa] -[ionos1-amd64:65636] *** End of error message *** +[i-capture-the-hostname:453168] *** Process received signal *** +[i-capture-the-hostname:453168] Signal: Aborted (6) +[i-capture-the-hostname:453168] Signal code: (-6) +[i-capture-the-hostname:453168] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fb96e853d60] +[i-capture-the-hostname:453168] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fb96e853ce1] +[i-capture-the-hostname:453168] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fb96e83d537] +[i-capture-the-hostname:453168] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fb96ebe27ec] +[i-capture-the-hostname:453168] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fb96ebed966] +[i-capture-the-hostname:453168] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fb96ebed9d1] +[i-capture-the-hostname:453168] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fb96ebedc65] +[i-capture-the-hostname:453168] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fb96efca813] +[i-capture-the-hostname:453168] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fb96f2fd9fe] +[i-capture-the-hostname:453168] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fb96f2e19cf] +[i-capture-the-hostname:453168] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fb96f2ce0b7] +[i-capture-the-hostname:453168] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fb96f2c4132] +[i-capture-the-hostname:453168] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fb96f093fa9] +[i-capture-the-hostname:453168] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fb96f0e1bb2] +[i-capture-the-hostname:453168] [14] [i-capture-the-hostname:453166] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fad8c023d60] +[i-capture-the-hostname:453166] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fad8c023ce1] +[i-capture-the-hostname:453166] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fad8c00d537] +[i-capture-the-hostname:453166] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fad8c3b27ec] +[i-capture-the-hostname:453166] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fad8c3bd966] +[i-capture-the-hostname:453166] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fad8c3bd9d1] +[i-capture-the-hostname:453166] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fad8c3bdc65] +[i-capture-the-hostname:453166] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fad8c79a813] +[i-capture-the-hostname:453166] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fad8cacd9fe] +[i-capture-the-hostname:453166] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fad8cab19cf] +[i-capture-the-hostname:453166] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fad8ca9e0b7] +[i-capture-the-hostname:453166] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fad8ca94132] +[i-capture-the-hostname:453166] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fad8c863fa9] +[i-capture-the-hostname:453166] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fad8c8b1bb2] +[i-capture-the-hostname:453166] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fad8c8b3790] +[i-capture-the-hostname:453166] [15] ./demo_mixed-poisson(+0x8a85)[0x562e4922ea85] +[i-capture-the-hostname:453166] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fad8c00ed0a] +[i-capture-the-hostname:453166] [17] ./demo_mixed-poisson(+0x8caa)[0x562e4922ecaa] +[i-capture-the-hostname:453166] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fb96f0e3790] +[i-capture-the-hostname:453168] [15] ./demo_mixed-poisson(+0x8a85)[0x5627b0f85a85] +[i-capture-the-hostname:453168] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fb96e83ed0a] +[i-capture-the-hostname:453168] [17] ./demo_mixed-poisson(+0x8caa)[0x5627b0f85caa] +[i-capture-the-hostname:453168] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 0 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 0 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 17: demo_neumann-poisson_mpi - 5/49 Test #4: demo_bcs_mpi ...........................***Failed 1.16 sec -Process 2: Solving linear variational problem. + Start 21: demo_nonmatching-interpolation_mpi + 6/49 Test #17: demo_neumann-poisson_mpi ...............***Failed 0.47 sec Process 0: Solving linear variational problem. Process 1: Solving linear variational problem. - Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 2: Solving linear variational problem. Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -8499,11 +8534,13 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65586] *** Process received signal *** -[ionos1-amd64:65586] Signal: Aborted (6) -[ionos1-amd64:65586] Signal code: (-6) -terminate called after throwing an instance of 'std::runtime_error' -[ionos1-amd64:65586] [ 0] what(): +[i-capture-the-hostname:453207] *** Process received signal *** +[i-capture-the-hostname:453207] Signal: Aborted (6) +[i-capture-the-hostname:453207] Signal code: (-6) +[i-capture-the-hostname:453207] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f0a19463d60] +[i-capture-the-hostname:453207] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f0a19463ce1] +[i-capture-the-hostname:453207] [ 2] terminate called after throwing an instance of 'std::runtime_error' + what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -8518,17 +8555,14 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- - -terminate called after throwing an instance of '/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fddb2d4bd60] -[ionos1-amd64:65586] [ 1] std::runtime_error' -[ionos1-amd64:65583] *** Process received signal *** -[ionos1-amd64:65583] Signal: Aborted (6) -[ionos1-amd64:65583] Signal code: (-6) +/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f0a1944d537] +[i-capture-the-hostname:453207] [ 3] +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -8544,83 +8578,84 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- - -/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fddb2d4bce1] -[ionos1-amd64:65586] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fddb2d35537] -[ionos1-amd64:65586] [ 3] [ionos1-amd64:65588] *** Process received signal *** -[ionos1-amd64:65588] Signal: Aborted (6) -[ionos1-amd64:65588] Signal code: (-6) -[ionos1-amd64:65583] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fddb30da7ec] -[ionos1-amd64:65586] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f3574fdbd60] -[ionos1-amd64:65583] [ 1] [ionos1-amd64:65588] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fddb30e5966] -[ionos1-amd64:65586] [ 5] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f3574fdbce1] -[ionos1-amd64:65583] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f3b8abdbd60] -[ionos1-amd64:65588] [ 1] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f3574fc5537] -[ionos1-amd64:65583] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fddb30e59d1] -[ionos1-amd64:65586] [ 6] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f3b8abdbce1] -[ionos1-amd64:65588] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fddb30e5c65] -[ionos1-amd64:65586] [ 7] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f3b8abc5537] -[ionos1-amd64:65588] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f357536a7ec] -[ionos1-amd64:65583] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f3b8af6a7ec] -[ionos1-amd64:65588] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f3575375966] -[ionos1-amd64:65583] [ 5] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fddb3392813] -[ionos1-amd64:65586] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f3b8af75966] -[ionos1-amd64:65588] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f35753759d1] -[ionos1-amd64:65583] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f3b8af759d1] -[ionos1-amd64:65588] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f3575375c65] -[ionos1-amd64:65583] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fddb36c59fe] -[ionos1-amd64:65586] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f3b8af75c65] -[ionos1-amd64:65588] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f3575622813] -[ionos1-amd64:65583] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f3b8b222813] -[ionos1-amd64:65588] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fddb36a99cf] -[ionos1-amd64:65586] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f35759559fe] -[ionos1-amd64:65583] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f3b8b5559fe] -[ionos1-amd64:65588] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fddb36960b7] -[ionos1-amd64:65586] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f35759399cf] -[ionos1-amd64:65583] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fddb368c132] -[ionos1-amd64:65586] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f3b8b5399cf] -[ionos1-amd64:65588] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f35759260b7] -[ionos1-amd64:65583] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fddb345bfa9] -[ionos1-amd64:65586] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f3b8b5260b7] -[ionos1-amd64:65588] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fddb34a9bb2] -[ionos1-amd64:65586] [14] ./demo_bcs(+0x6da9)[0x5563c89b7da9] -[ionos1-amd64:65586] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f357591c132] -[ionos1-amd64:65583] [12] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fddb2d36d0a] -[ionos1-amd64:65586] [16] ./demo_bcs(+0x706a)[0x5563c89b806a] -[ionos1-amd64:65586] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f3b8b51c132] -[ionos1-amd64:65588] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f35756ebfa9] -[ionos1-amd64:65583] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f3b8b2ebfa9] -[ionos1-amd64:65588] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f3575739bb2] -[ionos1-amd64:65583] [14] ./demo_bcs(+0x6da9)[0x55cb135ffda9] -[ionos1-amd64:65583] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f3574fc6d0a] -[ionos1-amd64:65583] [16] ./demo_bcs(+0x706a)[0x55cb1360006a] -[ionos1-amd64:65583] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f3b8b339bb2] -[ionos1-amd64:65588] [14] ./demo_bcs(+0x6da9)[0x55f1bd719da9] -[ionos1-amd64:65588] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f3b8abc6d0a] -[ionos1-amd64:65588] [16] ./demo_bcs(+0x706a)[0x55f1bd71a06a] -[ionos1-amd64:65588] *** End of error message *** +[i-capture-the-hostname:453208] *** Process received signal *** +[i-capture-the-hostname:453208] Signal: Aborted (6) +[i-capture-the-hostname:453208] Signal code: (-6) + +/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f0a197f27ec] +[i-capture-the-hostname:453207] [ 4] [i-capture-the-hostname:453206] *** Process received signal *** +[i-capture-the-hostname:453206] Signal: Aborted (6) +[i-capture-the-hostname:453206] Signal code: (-6) +/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f0a197fd966] +[i-capture-the-hostname:453207] [ 5] [i-capture-the-hostname:453208] [ 0] [i-capture-the-hostname:453206] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fc0eaacbd60] +[i-capture-the-hostname:453208] [ 1] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f0a197fd9d1] +[i-capture-the-hostname:453207] [ 6] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f288fcdbd60] +[i-capture-the-hostname:453206] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fc0eaacbce1] +[i-capture-the-hostname:453208] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fc0eaab5537] +[i-capture-the-hostname:453208] [ 3] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f288fcdbce1] +[i-capture-the-hostname:453206] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f0a197fdc65] +[i-capture-the-hostname:453207] [ 7] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f288fcc5537] +[i-capture-the-hostname:453206] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fc0eae5a7ec] +[i-capture-the-hostname:453208] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f289006a7ec] +[i-capture-the-hostname:453206] [ 4] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f0a19bda813] +[i-capture-the-hostname:453207] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fc0eae65966] +[i-capture-the-hostname:453208] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f2890075966] +[i-capture-the-hostname:453206] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f28900759d1] +[i-capture-the-hostname:453206] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fc0eae659d1] +[i-capture-the-hostname:453208] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fc0eae65c65] +[i-capture-the-hostname:453208] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f2890075c65] +[i-capture-the-hostname:453206] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f0a19f0d9fe] +[i-capture-the-hostname:453207] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fc0eb242813] +[i-capture-the-hostname:453208] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f2890452813] +[i-capture-the-hostname:453206] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f0a19ef19cf] +[i-capture-the-hostname:453207] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f28907859fe] +[i-capture-the-hostname:453206] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fc0eb5759fe] +[i-capture-the-hostname:453208] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f0a19ede0b7] +[i-capture-the-hostname:453207] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fc0eb5599cf] +[i-capture-the-hostname:453208] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f28907699cf] +[i-capture-the-hostname:453206] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f0a19ed4132] +[i-capture-the-hostname:453207] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f28907560b7] +[i-capture-the-hostname:453206] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fc0eb5460b7] +[i-capture-the-hostname:453208] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f0a19ca3fa9] +[i-capture-the-hostname:453207] [13] ./demo_neumann-poisson(+0x9264)[0x55589cc00264] +[i-capture-the-hostname:453207] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f0a1944ed0a] +[i-capture-the-hostname:453207] [15] ./demo_neumann-poisson(+0x95ea)[0x55589cc005ea] +[i-capture-the-hostname:453207] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f289074c132] +[i-capture-the-hostname:453206] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f289051bfa9] +[i-capture-the-hostname:453206] [13] ./demo_neumann-poisson(+0x9264)[0x563ccec62264] +[i-capture-the-hostname:453206] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f288fcc6d0a] +[i-capture-the-hostname:453206] [15] ./demo_neumann-poisson(+0x95ea)[0x563ccec625ea] +[i-capture-the-hostname:453206] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fc0eb53c132] +[i-capture-the-hostname:453208] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fc0eb30bfa9] +[i-capture-the-hostname:453208] [13] ./demo_neumann-poisson(+0x9264)[0x5615523e7264] +[i-capture-the-hostname:453208] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fc0eaab6d0a] +[i-capture-the-hostname:453208] [15] ./demo_neumann-poisson(+0x95ea)[0x5615523e75ea] +[i-capture-the-hostname:453208] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 1 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 19: demo_nonlinear-poisson_mpi - 6/49 Test #11: demo_eigenvalue_mpi .................... Passed 0.86 sec - Start 21: demo_nonmatching-interpolation_mpi - 7/49 Test #10: demo_cahn-hilliard_mpi .................***Failed 1.66 sec -Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Start 23: demo_periodic_mpi + 7/49 Test #21: demo_nonmatching-interpolation_mpi ..... Passed 0.50 sec + Start 25: demo_poisson_mpi + 8/49 Test #23: demo_periodic_mpi ......................***Failed 0.45 sec +Process 1: Solving linear variational problem. +Process 2: Solving linear variational problem. +Process 0: Solving linear variational problem. + Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -8643,28 +8678,14 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65577] *** Process received signal *** -[ionos1-amd64:65577] Signal: Aborted (6) -[ionos1-amd64:65577] Signal code: (-6) -[ionos1-amd64:65577] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f58837dbd60] -[ionos1-amd64:65577] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f58837dbce1] -[ionos1-amd64:65577] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f58837c5537] -[ionos1-amd64:65577] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f5883b6a7ec] -[ionos1-amd64:65577] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f5883b75966] -[ionos1-amd64:65577] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f5883b759d1] -[ionos1-amd64:65577] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f5883b75c65] -[ionos1-amd64:65577] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f5883f72813] -[ionos1-amd64:65577] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f58842a59fe] -[ionos1-amd64:65577] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f58842899cf] -[ionos1-amd64:65577] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f58842760b7] -[ionos1-amd64:65577] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f588426c04b] -[ionos1-amd64:65577] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7f588435d860] -[ionos1-amd64:65577] [13] ./demo_cahn-hilliard(+0x15fb4)[0x5640e4d45fb4] -[ionos1-amd64:65577] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f58837c6d0a] -[ionos1-amd64:65577] [15] ./demo_cahn-hilliard(+0x167aa)[0x5640e4d467aa] -[ionos1-amd64:65577] *** End of error message *** -terminate called after throwing an instance of 'std::runtime_error' - what(): +[i-capture-the-hostname:453249] *** Process received signal *** +[i-capture-the-hostname:453249] Signal: Aborted (6) +[i-capture-the-hostname:453249] Signal code: (-6) +[i-capture-the-hostname:453249] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f163b1cbd60] +[i-capture-the-hostname:453249] [ 1] terminate called after throwing an instance of '/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f163b1cbce1] +[i-capture-the-hostname:453249] [ 2] std::runtime_error' +/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f163b1b5537] +[i-capture-the-hostname:453249] [ 3] what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -8685,28 +8706,13 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65580] *** Process received signal *** -[ionos1-amd64:65580] Signal: Aborted (6) -[ionos1-amd64:65580] Signal code: (-6) -[ionos1-amd64:65580] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f75d43dbd60] -[ionos1-amd64:65580] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f75d43dbce1] -[ionos1-amd64:65580] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f75d43c5537] -[ionos1-amd64:65580] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f75d476a7ec] -[ionos1-amd64:65580] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f75d4775966] -[ionos1-amd64:65580] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f75d47759d1] -[ionos1-amd64:65580] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f75d4775c65] -[ionos1-amd64:65580] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f75d4b72813] -[ionos1-amd64:65580] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f75d4ea59fe] -[ionos1-amd64:65580] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f75d4e899cf] -[ionos1-amd64:65580] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f75d4e760b7] -[ionos1-amd64:65580] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f75d4e6c04b] -[ionos1-amd64:65580] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7f75d4f5d860] -[ionos1-amd64:65580] [13] ./demo_cahn-hilliard(+0x15fb4)[0x559f62d35fb4] -[ionos1-amd64:65580] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f75d43c6d0a] -[ionos1-amd64:65580] [15] ./demo_cahn-hilliard(+0x167aa)[0x559f62d367aa] -[ionos1-amd64:65580] *** End of error message *** -terminate called after throwing an instance of 'std::runtime_error' - what(): +[i-capture-the-hostname:453250] *** Process received signal *** +[i-capture-the-hostname:453250] Signal: Aborted (6) +[i-capture-the-hostname:453250] Signal code: (-6) +/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f163b55a7ec] +[i-capture-the-hostname:453249] [ 4] terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453250] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f163b565966] +[i-capture-the-hostname:453249] [ 5] what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -8727,44 +8733,74 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65573] *** Process received signal *** -[ionos1-amd64:65573] Signal: Aborted (6) -[ionos1-amd64:65573] Signal code: (-6) -[ionos1-amd64:65573] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f062610bd60] -[ionos1-amd64:65573] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f062610bce1] -[ionos1-amd64:65573] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f06260f5537] -[ionos1-amd64:65573] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f062649a7ec] -[ionos1-amd64:65573] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f06264a5966] -[ionos1-amd64:65573] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f06264a59d1] -[ionos1-amd64:65573] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f06264a5c65] -[ionos1-amd64:65573] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f06268a2813] -[ionos1-amd64:65573] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f0626bd59fe] -[ionos1-amd64:65573] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f0626bb99cf] -[ionos1-amd64:65573] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f0626ba60b7] -[ionos1-amd64:65573] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f0626b9c04b] -[ionos1-amd64:65573] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7f0626c8d860] -[ionos1-amd64:65573] [13] ./demo_cahn-hilliard(+0x15fb4)[0x556d9e6d2fb4] -[ionos1-amd64:65573] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f06260f6d0a] -[ionos1-amd64:65573] [15] ./demo_cahn-hilliard(+0x167aa)[0x556d9e6d37aa] -[ionos1-amd64:65573] *** End of error message *** +/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f4300f83d60] +[i-capture-the-hostname:453250] [ 1] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f163b5659d1] +[i-capture-the-hostname:453249] [ 6] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f4300f83ce1] +[i-capture-the-hostname:453250] [ 2] [i-capture-the-hostname:453248] *** Process received signal *** +[i-capture-the-hostname:453248] Signal: Aborted (6) +[i-capture-the-hostname:453248] Signal code: (-6) +/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f4300f6d537] +[i-capture-the-hostname:453250] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f163b565c65] +[i-capture-the-hostname:453249] [ 7] [i-capture-the-hostname:453248] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f43013127ec] +[i-capture-the-hostname:453250] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f4d1aa2bd60] +[i-capture-the-hostname:453248] [ 1] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f163b942813] +[i-capture-the-hostname:453249] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f430131d966] +[i-capture-the-hostname:453250] [ 5] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f4d1aa2bce1] +[i-capture-the-hostname:453248] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f4d1aa15537] +[i-capture-the-hostname:453248] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f430131d9d1] +[i-capture-the-hostname:453250] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f4d1adba7ec] +[i-capture-the-hostname:453248] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f430131dc65] +[i-capture-the-hostname:453250] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f163bc759fe] +[i-capture-the-hostname:453249] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f4d1adc5966] +[i-capture-the-hostname:453248] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f4d1adc59d1] +[i-capture-the-hostname:453248] [ 6] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f43016fa813] +[i-capture-the-hostname:453250] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f163bc599cf] +[i-capture-the-hostname:453249] [10] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f4d1adc5c65] +[i-capture-the-hostname:453248] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f4301a2d9fe] +[i-capture-the-hostname:453250] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f163bc460b7] +[i-capture-the-hostname:453249] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f4d1b1a2813] +[i-capture-the-hostname:453248] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f163bc3c132] +[i-capture-the-hostname:453249] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f4301a119cf] +[i-capture-the-hostname:453250] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f4d1b4d59fe] +[i-capture-the-hostname:453248] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f163ba0bfa9] +[i-capture-the-hostname:453249] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f43019fe0b7] +[i-capture-the-hostname:453250] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f4d1b4b99cf] +[i-capture-the-hostname:453248] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f163ba59bb2] +[i-capture-the-hostname:453249] [14] ./demo_periodic(+0x7aed)[0x55b7e2af7aed] +[i-capture-the-hostname:453249] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f163b1b6d0a] +[i-capture-the-hostname:453249] [16] ./demo_periodic(+0x7d1a)[0x55b7e2af7d1a] +[i-capture-the-hostname:453249] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f4d1b4a60b7] +[i-capture-the-hostname:453248] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f43019f4132] +[i-capture-the-hostname:453250] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f4d1b49c132] +[i-capture-the-hostname:453248] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f43017c3fa9] +[i-capture-the-hostname:453250] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f4d1b26bfa9] +[i-capture-the-hostname:453248] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f4301811bb2] +[i-capture-the-hostname:453250] [14] ./demo_periodic(+0x7aed)[0x55e962e92aed] +[i-capture-the-hostname:453250] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f4300f6ed0a] +[i-capture-the-hostname:453250] [16] ./demo_periodic(+0x7d1a)[0x55e962e92d1a] +[i-capture-the-hostname:453250] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f4d1b2b9bb2] +[i-capture-the-hostname:453248] [14] ./demo_periodic(+0x7aed)[0x55d567509aed] +[i-capture-the-hostname:453248] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f4d1aa16d0a] +[i-capture-the-hostname:453248] [16] ./demo_periodic(+0x7d1a)[0x55d567509d1a] +[i-capture-the-hostname:453248] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 2 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 23: demo_periodic_mpi - 8/49 Test #21: demo_nonmatching-interpolation_mpi ..... Passed 0.47 sec - Start 25: demo_poisson_mpi - 9/49 Test #17: demo_neumann-poisson_mpi ...............***Failed 1.53 sec -Process 2: Solving linear variational problem. + Start 27: demo_singular-poisson_mpi + 9/49 Test #25: demo_poisson_mpi .......................***Failed 0.47 sec Process 0: Solving linear variational problem. Process 1: Solving linear variational problem. - Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 2: Solving linear variational problem. Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -8787,28 +8823,12 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65672] *** Process received signal *** -[ionos1-amd64:65672] Signal: Aborted (6) -[ionos1-amd64:65672] Signal code: (-6) -[ionos1-amd64:65672] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7efe44f5bd60] -[ionos1-amd64:65672] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7efe44f5bce1] -[ionos1-amd64:65672] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7efe44f45537] -[ionos1-amd64:65672] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7efe452ea7ec] -[ionos1-amd64:65672] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7efe452f5966] -[ionos1-amd64:65672] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7efe452f59d1] -[ionos1-amd64:65672] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7efe452f5c65] -[ionos1-amd64:65672] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7efe456d2813] -[ionos1-amd64:65672] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7efe45a059fe] -[ionos1-amd64:65672] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7efe459e99cf] -[ionos1-amd64:65672] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7efe459d60b7] -[ionos1-amd64:65672] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7efe459cc132] -[ionos1-amd64:65672] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7efe4579bfa9] -[ionos1-amd64:65672] [13] ./demo_neumann-poisson(+0x9264)[0x55bee3189264] -[ionos1-amd64:65672] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7efe44f46d0a] -[ionos1-amd64:65672] [15] ./demo_neumann-poisson(+0x95ea)[0x55bee31895ea] -[ionos1-amd64:65672] *** End of error message *** -terminate called after throwing an instance of 'std::runtime_error' - what(): +[i-capture-the-hostname:453265] *** Process received signal *** +[i-capture-the-hostname:453265] Signal: Aborted (6) +[i-capture-the-hostname:453265] Signal code: (-6) +[i-capture-the-hostname:453265] [ 0] terminate called after throwing an instance of 'std::runtime_error' +/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fdf05df3d60] +[i-capture-the-hostname:453265] [ 1] what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -8829,16 +8849,9 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65673] *** Process received signal *** -[ionos1-amd64:65673] Signal: Aborted (6) -[ionos1-amd64:65673] Signal code: (-6) -[ionos1-amd64:65673] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f5e58693d60] -[ionos1-amd64:65673] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f5e58693ce1] -[ionos1-amd64:65673] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f5e5867d537] -[ionos1-amd64:65673] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f5e58a227ec] -[ionos1-amd64:65673] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f5e58a2d966] -[ionos1-amd64:65673] [ 5] terminate called after throwing an instance of 'std::runtime_error' - what(): +terminate called after throwing an instance of 'std::runtime_error' +/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fdf05df3ce1] +[i-capture-the-hostname:453265] [ 2] what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -8859,82 +8872,84 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65671] *** Process received signal *** -[ionos1-amd64:65671] Signal: Aborted (6) -[ionos1-amd64:65671] Signal code: (-6) -[ionos1-amd64:65671] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f1ef7903d60] -[ionos1-amd64:65671] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f1ef7903ce1] -[ionos1-amd64:65671] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f1ef78ed537] -[ionos1-amd64:65671] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f1ef7c927ec] -[ionos1-amd64:65671] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f1ef7c9d966] -[ionos1-amd64:65671] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f1ef7c9d9d1] -[ionos1-amd64:65671] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f1ef7c9dc65] -[ionos1-amd64:65671] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f1ef807a813] -[ionos1-amd64:65671] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f1ef83ad9fe] -[ionos1-amd64:65671] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f1ef83919cf] -[ionos1-amd64:65671] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f1ef837e0b7] -[ionos1-amd64:65671] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f1ef8374132] -[ionos1-amd64:65671] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f1ef8143fa9] -[ionos1-amd64:65671] [13] ./demo_neumann-poisson(+0x9264)[0x5646b2658264] -[ionos1-amd64:65671] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f1ef78eed0a] -[ionos1-amd64:65671] [15] ./demo_neumann-poisson(+0x95ea)[0x5646b26585ea] -[ionos1-amd64:65671] *** End of error message *** -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f5e58a2d9d1] -[ionos1-amd64:65673] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f5e58a2dc65] -[ionos1-amd64:65673] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f5e58e0a813] -[ionos1-amd64:65673] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f5e5913d9fe] -[ionos1-amd64:65673] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f5e591219cf] -[ionos1-amd64:65673] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f5e5910e0b7] -[ionos1-amd64:65673] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f5e59104132] -[ionos1-amd64:65673] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f5e58ed3fa9] -[ionos1-amd64:65673] [13] ./demo_neumann-poisson(+0x9264)[0x55d61115b264] -[ionos1-amd64:65673] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f5e5867ed0a] -[ionos1-amd64:65673] [15] ./demo_neumann-poisson(+0x95ea)[0x55d61115b5ea] -[ionos1-amd64:65673] *** End of error message *** +/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fdf05ddd537] +[i-capture-the-hostname:453265] [ 3] [i-capture-the-hostname:453266] *** Process received signal *** +[i-capture-the-hostname:453264] *** Process received signal *** +[i-capture-the-hostname:453266] Signal: Aborted (6) +[i-capture-the-hostname:453266] Signal code: (-6) +[i-capture-the-hostname:453264] Signal: Aborted (6) +[i-capture-the-hostname:453264] Signal code: (-6) +/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fdf061827ec] +[i-capture-the-hostname:453265] [ 4] [i-capture-the-hostname:453266] [ 0] [i-capture-the-hostname:453264] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fdf0618d966] +[i-capture-the-hostname:453265] [ 5] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f14f5423d60] +[i-capture-the-hostname:453264] [ 1] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f184a76bd60] +[i-capture-the-hostname:453266] [ 1] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fdf0618d9d1] +[i-capture-the-hostname:453265] [ 6] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f184a76bce1] +[i-capture-the-hostname:453266] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f14f5423ce1] +[i-capture-the-hostname:453264] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fdf0618dc65] +[i-capture-the-hostname:453265] [ 7] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f184a755537] +[i-capture-the-hostname:453266] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f14f540d537] +[i-capture-the-hostname:453264] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f184aafa7ec] +[i-capture-the-hostname:453266] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f14f57b27ec] +[i-capture-the-hostname:453264] [ 4] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fdf0656a813] +[i-capture-the-hostname:453265] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f14f57bd966] +[i-capture-the-hostname:453264] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f184ab05966] +[i-capture-the-hostname:453266] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f14f57bd9d1] +[i-capture-the-hostname:453264] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f184ab059d1] +[i-capture-the-hostname:453266] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f14f57bdc65] +[i-capture-the-hostname:453264] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fdf0689d9fe] +[i-capture-the-hostname:453265] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f184ab05c65] +[i-capture-the-hostname:453266] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fdf068819cf] +[i-capture-the-hostname:453265] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f14f5b9a813] +[i-capture-the-hostname:453264] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f184aee2813] +[i-capture-the-hostname:453266] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f14f5ecd9fe] +[i-capture-the-hostname:453264] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fdf0686e0b7] +[i-capture-the-hostname:453265] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f184b2159fe] +[i-capture-the-hostname:453266] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fdf06864132] +[i-capture-the-hostname:453265] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f184b1f99cf] +[i-capture-the-hostname:453266] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f14f5eb19cf] +[i-capture-the-hostname:453264] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fdf06633fa9] +[i-capture-the-hostname:453265] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f14f5e9e0b7] +[i-capture-the-hostname:453264] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f184b1e60b7] +[i-capture-the-hostname:453266] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fdf06681bb2] +[i-capture-the-hostname:453265] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f184b1dc132] +[i-capture-the-hostname:453266] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f14f5e94132] +[i-capture-the-hostname:453264] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fdf06683790] +[i-capture-the-hostname:453265] [15] ./demo_poisson(+0x7c59)[0x559cd5232c59] +[i-capture-the-hostname:453265] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fdf05dded0a] +[i-capture-the-hostname:453265] [17] ./demo_poisson(+0x7e9a)[0x559cd5232e9a] +[i-capture-the-hostname:453265] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f14f5c63fa9] +[i-capture-the-hostname:453264] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f184afabfa9] +[i-capture-the-hostname:453266] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f184aff9bb2] +[i-capture-the-hostname:453266] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f14f5cb1bb2] +[i-capture-the-hostname:453264] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f14f5cb3790] +[i-capture-the-hostname:453264] [15] ./demo_poisson(+0x7c59)[0x557119aa0c59] +[i-capture-the-hostname:453264] [16] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f184affb790] +[i-capture-the-hostname:453266] [15] ./demo_poisson(+0x7c59)[0x558283465c59] +[i-capture-the-hostname:453266] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f14f540ed0a] +[i-capture-the-hostname:453264] [17] ./demo_poisson(+0x7e9a)[0x557119aa0e9a] +[i-capture-the-hostname:453264] *** End of error message *** +/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f184a756d0a] +[i-capture-the-hostname:453266] [17] ./demo_poisson(+0x7e9a)[0x558283465e9a] +[i-capture-the-hostname:453266] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 0 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 27: demo_singular-poisson_mpi -10/49 Test #15: demo_navier-stokes_mpi ................. Passed 2.14 sec Start 29: demo_stokes-iterative_mpi -11/49 Test #29: demo_stokes-iterative_mpi ..............***Failed 0.11 sec -*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. -*** This is disallowed by the MPI standard. -*** Your MPI job will now abort. -[ionos1-amd64:65746] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! --------------------------------------------------------------------------- -Primary job terminated normally, but 1 process returned -a non-zero exit code. Per user-direction, the job has been aborted. --------------------------------------------------------------------------- -*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. -*** This is disallowed by the MPI standard. -*** Your MPI job will now abort. -[ionos1-amd64:65748] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! -*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. -*** This is disallowed by the MPI standard. -*** Your MPI job will now abort. -[ionos1-amd64:65747] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! --------------------------------------------------------------------------- -mpirun detected that one or more processes exited with non-zero status, thus causing -the job to be terminated. The first process to do so was: - - Process name: [[48176,1],0] - Exit code: 1 --------------------------------------------------------------------------- - - Start 30: demo_stokes-taylor-hood_mpi -12/49 Test #23: demo_periodic_mpi ......................***Failed 1.49 sec -Process 0: Solving linear variational problem. -Process 1: Solving linear variational problem. -Process 2: Solving linear variational problem. +10/49 Test #19: demo_nonlinear-poisson_mpi .............***Failed 1.47 sec +Process 0: Solving nonlinear variational problem. +Process 1: Solving nonlinear variational problem. +Process 2: Solving nonlinear variational problem. Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 0: Newton iteration 0: r (abs) = 1.247e+01 (tol = 1.000e-10) r (rel) = 1.000e+00 (tol = 1.000e-06) terminate called after throwing an instance of 'std::runtime_error' what(): @@ -8956,15 +8971,8 @@ *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- - -[ionos1-amd64:65707] *** Process received signal *** -[ionos1-amd64:65707] Signal: Aborted (6) -[ionos1-amd64:65707] Signal code: (-6) -[ionos1-amd64:65707] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f06764b3d60] -[ionos1-amd64:65707] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f06764b3ce1] -[ionos1-amd64:65707] [ 2] terminate called after throwing an instance of 'std::runtime_error' -/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f067649d537] -[ionos1-amd64:65707] [ 3] what(): +terminate called after throwing an instance of 'std::runtime_error' + what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -8985,12 +8993,12 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65708] *** Process received signal *** -[ionos1-amd64:65708] Signal: Aborted (6) -[ionos1-amd64:65708] Signal code: (-6) terminate called after throwing an instance of 'std::runtime_error' -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f06768427ec] -[ionos1-amd64:65707] [ 4] what(): + +[i-capture-the-hostname:453224] *** Process received signal *** +[i-capture-the-hostname:453224] Signal: Aborted (6) +[i-capture-the-hostname:453224] Signal code: (-6) + what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -9011,72 +9019,87 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65709] *** Process received signal *** -[ionos1-amd64:65709] Signal: Aborted (6) -[ionos1-amd64:65709] Signal code: (-6) -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f067684d966] -[ionos1-amd64:65707] [ 5] [ionos1-amd64:65708] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f067684d9d1] -[ionos1-amd64:65707] [ 6] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fb27dcc3d60] -[ionos1-amd64:65708] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fb27dcc3ce1] -[ionos1-amd64:65708] [ 2] [ionos1-amd64:65709] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f067684dc65] -[ionos1-amd64:65707] [ 7] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fb27dcad537] -[ionos1-amd64:65708] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f9902a03d60] -[ionos1-amd64:65709] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f9902a03ce1] -[ionos1-amd64:65709] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fb27e0527ec] -[ionos1-amd64:65708] [ 4] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f99029ed537] -[ionos1-amd64:65709] [ 3] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f0676c2a813] -[ionos1-amd64:65707] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fb27e05d966] -[ionos1-amd64:65708] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f9902d927ec] -[ionos1-amd64:65709] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fb27e05d9d1] -[ionos1-amd64:65708] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f9902d9d966] -[ionos1-amd64:65709] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fb27e05dc65] -[ionos1-amd64:65708] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f0676f5d9fe] -[ionos1-amd64:65707] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f9902d9d9d1] -[ionos1-amd64:65709] [ 6] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fb27e43a813] -[ionos1-amd64:65708] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f9902d9dc65] -[ionos1-amd64:65709] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f0676f419cf] -[ionos1-amd64:65707] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f990317a813] -[ionos1-amd64:65709] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f0676f2e0b7] -[ionos1-amd64:65707] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fb27e76d9fe] -[ionos1-amd64:65708] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fb27e7519cf] -[ionos1-amd64:65708] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f0676f24132] -[ionos1-amd64:65707] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f99034ad9fe] -[ionos1-amd64:65709] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f0676cf3fa9] -[ionos1-amd64:65707] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f99034919cf] -[ionos1-amd64:65709] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fb27e73e0b7] -[ionos1-amd64:65708] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f0676d41bb2] -[ionos1-amd64:65707] [14] ./demo_periodic(+0x7aed)[0x562b9e563aed] -[ionos1-amd64:65707] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f067649ed0a] -[ionos1-amd64:65707] [16] ./demo_periodic(+0x7d1a)[0x562b9e563d1a] -[ionos1-amd64:65707] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f990347e0b7] -[ionos1-amd64:65709] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fb27e734132] -[ionos1-amd64:65708] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f9903474132] -[ionos1-amd64:65709] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fb27e503fa9] -[ionos1-amd64:65708] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f9903243fa9] -[ionos1-amd64:65709] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fb27e551bb2] -[ionos1-amd64:65708] [14] ./demo_periodic(+0x7aed)[0x557c6f7b7aed] -[ionos1-amd64:65708] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fb27dcaed0a] -[ionos1-amd64:65708] [16] ./demo_periodic(+0x7d1a)[0x557c6f7b7d1a] -[ionos1-amd64:65708] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f9903291bb2] -[ionos1-amd64:65709] [14] ./demo_periodic(+0x7aed)[0x5601a2312aed] -[ionos1-amd64:65709] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f99029eed0a] -[ionos1-amd64:65709] [16] ./demo_periodic(+0x7d1a)[0x5601a2312d1a] -[ionos1-amd64:65709] *** End of error message *** +[i-capture-the-hostname:453222] *** Process received signal *** +[i-capture-the-hostname:453222] Signal: Aborted (6) +[i-capture-the-hostname:453222] Signal code: (-6) +[i-capture-the-hostname:453226] *** Process received signal *** +[i-capture-the-hostname:453226] Signal: Aborted (6) +[i-capture-the-hostname:453226] Signal code: (-6) +[i-capture-the-hostname:453224] [ 0] [i-capture-the-hostname:453222] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fde2a393d60] +[i-capture-the-hostname:453222] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fde2a393ce1] +[i-capture-the-hostname:453222] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fde2a37d537] +[i-capture-the-hostname:453222] [ 3] [i-capture-the-hostname:453226] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f8fd4c33d60] +[i-capture-the-hostname:453226] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f8fd4c33ce1] +[i-capture-the-hostname:453226] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f8fd4c1d537] +[i-capture-the-hostname:453226] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fb45c87bd60] +[i-capture-the-hostname:453224] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fb45c87bce1] +[i-capture-the-hostname:453224] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fb45c865537] +[i-capture-the-hostname:453224] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fb45cc0a7ec] +[i-capture-the-hostname:453224] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fde2a7227ec] +[i-capture-the-hostname:453222] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fb45cc15966] +[i-capture-the-hostname:453224] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f8fd4fc27ec] +[i-capture-the-hostname:453226] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fde2a72d966] +[i-capture-the-hostname:453222] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fb45cc159d1] +[i-capture-the-hostname:453224] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f8fd4fcd966] +[i-capture-the-hostname:453226] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fb45cc15c65] +[i-capture-the-hostname:453224] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fde2a72d9d1] +[i-capture-the-hostname:453222] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f8fd4fcd9d1] +[i-capture-the-hostname:453226] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fde2a72dc65] +[i-capture-the-hostname:453222] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fb45cff2813] +[i-capture-the-hostname:453224] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f8fd4fcdc65] +[i-capture-the-hostname:453226] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fde2ab0a813] +[i-capture-the-hostname:453222] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f8fd53aa813] +[i-capture-the-hostname:453226] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fb45d3259fe] +[i-capture-the-hostname:453224] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fde2ae3d9fe] +[i-capture-the-hostname:453222] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fb45d3099cf] +[i-capture-the-hostname:453224] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f8fd56dd9fe] +[i-capture-the-hostname:453226] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fde2ae219cf] +[i-capture-the-hostname:453222] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fb45d2f60b7] +[i-capture-the-hostname:453224] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f8fd56c19cf] +[i-capture-the-hostname:453226] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fde2ae0e0b7] +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f8fd56ae0b7] +[i-capture-the-hostname:453226] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7fb45d2ec04b] +[i-capture-the-hostname:453224] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f8fd56a404b] +[i-capture-the-hostname:453226] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7fb45d3dd860] +[i-capture-the-hostname:453224] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin26NonlinearVariationalSolver5solveEv+0x439)[0x7fb45d0ed9f9] +[i-capture-the-hostname:453224] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7f8fd5795860] +[i-capture-the-hostname:453226] [13] [i-capture-the-hostname:453222] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EERKNS_4FormENS_10ParametersE+0x4b6)[0x7fb45d10aef6] +[i-capture-the-hostname:453224] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin26NonlinearVariationalSolver5solveEv+0x439)[0x7f8fd54a59f9] +[i-capture-the-hostname:453226] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7fde2ae0404b] +[i-capture-the-hostname:453222] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCERKNS_4FormENS_10ParametersE+0x85)[0x7fb45d10b915] +[i-capture-the-hostname:453224] [16] ./demo_nonlinear-poisson(+0x7aca)[0x562f1ed99aca] +[i-capture-the-hostname:453224] [17] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EERKNS_4FormENS_10ParametersE+0x4b6)[0x7f8fd54c2ef6] +[i-capture-the-hostname:453226] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fb45c866d0a] +[i-capture-the-hostname:453224] [18] ./demo_nonlinear-poisson(+0x7cfa)[0x562f1ed99cfa] +[i-capture-the-hostname:453224] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7fde2aef5860] +[i-capture-the-hostname:453222] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCERKNS_4FormENS_10ParametersE+0x85)[0x7f8fd54c3915] +[i-capture-the-hostname:453226] [16] ./demo_nonlinear-poisson(+0x7aca)[0x5584f41bbaca] +[i-capture-the-hostname:453226] [17] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f8fd4c1ed0a] +[i-capture-the-hostname:453226] [18] ./demo_nonlinear-poisson(+0x7cfa)[0x5584f41bbcfa] +[i-capture-the-hostname:453226] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin26NonlinearVariationalSolver5solveEv+0x439)[0x7fde2ac059f9] +[i-capture-the-hostname:453222] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EERKNS_4FormENS_10ParametersE+0x4b6)[0x7fde2ac22ef6] +[i-capture-the-hostname:453222] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCERKNS_4FormENS_10ParametersE+0x85)[0x7fde2ac23915] +[i-capture-the-hostname:453222] [16] ./demo_nonlinear-poisson(+0x7aca)[0x55f82ef2eaca] +[i-capture-the-hostname:453222] [17] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fde2a37ed0a] +[i-capture-the-hostname:453222] [18] ./demo_nonlinear-poisson(+0x7cfa)[0x55f82ef2ecfa] +[i-capture-the-hostname:453222] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 0 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 0 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 32: demo_subdomains_mpi -13/49 Test #25: demo_poisson_mpi .......................***Failed 1.45 sec -Process 2: Solving linear variational problem. -Process 1: Solving linear variational problem. -Process 0: Solving linear variational problem. + Start 30: demo_stokes-taylor-hood_mpi +11/49 Test #10: demo_cahn-hilliard_mpi .................***Failed 2.80 sec +Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +terminate called after throwing an instance of 'std::runtime_error' +terminate called after throwing an instance of 'std::runtime_error' terminate called after throwing an instance of 'std::runtime_error' what(): @@ -9099,29 +9122,9 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65721] *** Process received signal *** -[ionos1-amd64:65721] Signal: Aborted (6) -[ionos1-amd64:65721] Signal code: (-6) -[ionos1-amd64:65721] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f0b219a3d60] -[ionos1-amd64:65721] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f0b219a3ce1] -[ionos1-amd64:65721] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f0b2198d537] -[ionos1-amd64:65721] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f0b21d327ec] -[ionos1-amd64:65721] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f0b21d3d966] -[ionos1-amd64:65721] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f0b21d3d9d1] -[ionos1-amd64:65721] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f0b21d3dc65] -[ionos1-amd64:65721] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f0b2211a813] -[ionos1-amd64:65721] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f0b2244d9fe] -[ionos1-amd64:65721] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f0b224319cf] -[ionos1-amd64:65721] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f0b2241e0b7] -[ionos1-amd64:65721] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f0b22414132] -[ionos1-amd64:65721] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f0b221e3fa9] -[ionos1-amd64:65721] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f0b22231bb2] -[ionos1-amd64:65721] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f0b22233790] -[ionos1-amd64:65721] [15] ./demo_poisson(+0x7c59)[0x55e872f24c59] -[ionos1-amd64:65721] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f0b2198ed0a] -[ionos1-amd64:65721] [17] ./demo_poisson(+0x7e9a)[0x55e872f24e9a] -[ionos1-amd64:65721] *** End of error message *** -terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:451920] *** Process received signal *** +[i-capture-the-hostname:451920] Signal: Aborted (6) +[i-capture-the-hostname:451920] Signal code: (-6) what(): *** ------------------------------------------------------------------------- @@ -9137,35 +9140,15 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65722] *** Process received signal *** -[ionos1-amd64:65722] Signal: Aborted (6) -[ionos1-amd64:65722] Signal code: (-6) -[ionos1-amd64:65722] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f4c70ba3d60] -[ionos1-amd64:65722] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f4c70ba3ce1] -[ionos1-amd64:65722] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f4c70b8d537] -[ionos1-amd64:65722] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f4c70f327ec] -[ionos1-amd64:65722] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f4c70f3d966] -[ionos1-amd64:65722] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f4c70f3d9d1] -[ionos1-amd64:65722] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f4c70f3dc65] -[ionos1-amd64:65722] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f4c7131a813] -[ionos1-amd64:65722] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f4c7164d9fe] -[ionos1-amd64:65722] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f4c716319cf] -[ionos1-amd64:65722] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f4c7161e0b7] -[ionos1-amd64:65722] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f4c71614132] -[ionos1-amd64:65722] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f4c713e3fa9] -[ionos1-amd64:65722] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f4c71431bb2] -[ionos1-amd64:65722] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f4c71433790] -[ionos1-amd64:65722] [15] ./demo_poisson(+0x7c59)[0x561eed637c59] -[ionos1-amd64:65722] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f4c70b8ed0a] -[ionos1-amd64:65722] [17] ./demo_poisson(+0x7e9a)[0x561eed637e9a] -[ionos1-amd64:65722] *** End of error message *** -terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:451904] *** Process received signal *** +[i-capture-the-hostname:451904] Signal: Aborted (6) +[i-capture-the-hostname:451904] Signal code: (-6) what(): *** ------------------------------------------------------------------------- @@ -9181,57 +9164,83 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65720] *** Process received signal *** -[ionos1-amd64:65720] Signal: Aborted (6) -[ionos1-amd64:65720] Signal code: (-6) -[ionos1-amd64:65720] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f0549d7bd60] -[ionos1-amd64:65720] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f0549d7bce1] -[ionos1-amd64:65720] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f0549d65537] -[ionos1-amd64:65720] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f054a10a7ec] -[ionos1-amd64:65720] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f054a115966] -[ionos1-amd64:65720] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f054a1159d1] -[ionos1-amd64:65720] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f054a115c65] -[ionos1-amd64:65720] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f054a4f2813] -[ionos1-amd64:65720] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f054a8259fe] -[ionos1-amd64:65720] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f054a8099cf] -[ionos1-amd64:65720] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f054a7f60b7] -[ionos1-amd64:65720] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f054a7ec132] -[ionos1-amd64:65720] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f054a5bbfa9] -[ionos1-amd64:65720] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f054a609bb2] -[ionos1-amd64:65720] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f054a60b790] -[ionos1-amd64:65720] [15] Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -./demo_poisson(+0x7c59)[0x55c6acec3c59] -[ionos1-amd64:65720] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f0549d66d0a] -[ionos1-amd64:65720] [17] ./demo_poisson(+0x7e9a)[0x55c6acec3e9a] -[ionos1-amd64:65720] *** End of error message *** +[i-capture-the-hostname:451948] *** Process received signal *** +[i-capture-the-hostname:451948] Signal: Aborted (6) +[i-capture-the-hostname:451948] Signal code: (-6) +[i-capture-the-hostname:451948] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fef5c10bd60] +[i-capture-the-hostname:451948] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fef5c10bce1] +[i-capture-the-hostname:451948] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fef5c0f5537] +[i-capture-the-hostname:451948] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fef5c49a7ec] +[i-capture-the-hostname:451948] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fef5c4a5966] +[i-capture-the-hostname:451948] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fef5c4a59d1] +[i-capture-the-hostname:451948] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fef5c4a5c65] +[i-capture-the-hostname:451948] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fef5c8a2813] +[i-capture-the-hostname:451948] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fef5cbd59fe] +[i-capture-the-hostname:451948] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fef5cbb99cf] +[i-capture-the-hostname:451948] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fef5cba60b7] +[i-capture-the-hostname:451948] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7fef5cb9c04b] +[i-capture-the-hostname:451948] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7fef5cc8d860] +[i-capture-the-hostname:451948] [13] ./demo_cahn-hilliard(+0x15fb4)[0x55aa5764bfb4] +[i-capture-the-hostname:451948] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fef5c0f6d0a] +[i-capture-the-hostname:451948] [15] ./demo_cahn-hilliard(+0x167aa)[0x55aa5764c7aa] +[i-capture-the-hostname:451948] *** End of error message *** +[i-capture-the-hostname:451904] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f6328cf3d60] +[i-capture-the-hostname:451904] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f6328cf3ce1] +[i-capture-the-hostname:451904] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f6328cdd537] +[i-capture-the-hostname:451904] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f63290827ec] +[i-capture-the-hostname:451904] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f632908d966] +[i-capture-the-hostname:451904] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f632908d9d1] +[i-capture-the-hostname:451904] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f632908dc65] +[i-capture-the-hostname:451904] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f632948a813] +[i-capture-the-hostname:451904] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f63297bd9fe] +[i-capture-the-hostname:451904] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f63297a19cf] +[i-capture-the-hostname:451904] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f632978e0b7] +[i-capture-the-hostname:451904] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f632978404b] +[i-capture-the-hostname:451904] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7f6329875860] +[i-capture-the-hostname:451904] [13] ./demo_cahn-hilliard(+0x15fb4)[0x55b7434e1fb4] +[i-capture-the-hostname:451904] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f6328cded0a] +[i-capture-the-hostname:451904] [15] ./demo_cahn-hilliard(+0x167aa)[0x55b7434e27aa] +[i-capture-the-hostname:451904] *** End of error message *** +[i-capture-the-hostname:451920] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fc4fa3b3d60] +[i-capture-the-hostname:451920] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fc4fa3b3ce1] +[i-capture-the-hostname:451920] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fc4fa39d537] +[i-capture-the-hostname:451920] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fc4fa7427ec] +[i-capture-the-hostname:451920] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fc4fa74d966] +[i-capture-the-hostname:451920] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fc4fa74d9d1] +[i-capture-the-hostname:451920] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fc4fa74dc65] +[i-capture-the-hostname:451920] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fc4fab4a813] +[i-capture-the-hostname:451920] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fc4fae7d9fe] +[i-capture-the-hostname:451920] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fc4fae619cf] +[i-capture-the-hostname:451920] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fc4fae4e0b7] +[i-capture-the-hostname:451920] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7fc4fae4404b] +[i-capture-the-hostname:451920] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7fc4faf35860] +[i-capture-the-hostname:451920] [13] ./demo_cahn-hilliard(+0x15fb4)[0x55dd00c1ffb4] +[i-capture-the-hostname:451920] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fc4fa39ed0a] +[i-capture-the-hostname:451920] [15] ./demo_cahn-hilliard(+0x167aa)[0x55dd00c207aa] +[i-capture-the-hostname:451920] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 1 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 2 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 34: demo_advection-diffusion_mpi -14/49 Test #27: demo_singular-poisson_mpi .............. Passed 0.74 sec - Start 36: demo_ale_mpi -15/49 Test #30: demo_stokes-taylor-hood_mpi ............***Failed 0.65 sec -Process 0: Solving linear variational problem. + Start 32: demo_subdomains_mpi +12/49 Test #6: demo_biharmonic_mpi ....................***Failed 2.82 sec Process 1: Solving linear variational problem. Process 2: Solving linear variational problem. - Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 0: Solving linear variational problem. Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' -terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9247,12 +9256,30 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- +[i-capture-the-hostname:451808] *** Process received signal *** +[i-capture-the-hostname:451808] Signal: Aborted (6) +[i-capture-the-hostname:451808] Signal code: (-6) +[i-capture-the-hostname:451808] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7feab437bd60] +[i-capture-the-hostname:451808] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7feab437bce1] +[i-capture-the-hostname:451808] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7feab4365537] +[i-capture-the-hostname:451808] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7feab470a7ec] +[i-capture-the-hostname:451808] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7feab4715966] +[i-capture-the-hostname:451808] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7feab47159d1] +[i-capture-the-hostname:451808] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7feab4715c65] +[i-capture-the-hostname:451808] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7feab4af2813] +[i-capture-the-hostname:451808] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7feab4e259fe] +[i-capture-the-hostname:451808] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7feab4e099cf] +[i-capture-the-hostname:451808] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7feab4df60b7] +[i-capture-the-hostname:451808] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7feab4dec132] +[i-capture-the-hostname:451808] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7feab4bbbfa9] +[i-capture-the-hostname:451808] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7feab4c09bb2] +[i-capture-the-hostname:451808] [14] terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9268,19 +9295,26 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 1 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65755] *** Process received signal *** -[ionos1-amd64:65755] Signal: Aborted (6) -[ionos1-amd64:65755] Signal code: (-6) -[ionos1-amd64:65754] *** Process received signal *** -[ionos1-amd64:65754] Signal: Aborted (6) -[ionos1-amd64:65754] Signal code: (-6) -terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:451852] *** Process received signal *** +[i-capture-the-hostname:451852] Signal: Aborted (6) +[i-capture-the-hostname:451852] Signal code: (-6) +[i-capture-the-hostname:451852] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fe56048bd60] +[i-capture-the-hostname:451852] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fe56048bce1] +[i-capture-the-hostname:451852] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fe560475537] +[i-capture-the-hostname:451852] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fe56081a7ec] +[i-capture-the-hostname:451852] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fe560825966] +[i-capture-the-hostname:451852] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fe5608259d1] +[i-capture-the-hostname:451852] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fe560825c65] +[i-capture-the-hostname:451852] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fe560c02813] +[i-capture-the-hostname:451852] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fe560f359fe] +[i-capture-the-hostname:451852] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fe560f199cf] +[i-capture-the-hostname:451852] [10] terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9296,86 +9330,94 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 1 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65753] *** Process received signal *** -[ionos1-amd64:65753] Signal: Aborted (6) -[ionos1-amd64:65753] Signal code: (-6) -[ionos1-amd64:65755] [ 0] [ionos1-amd64:65754] [ 0] [ionos1-amd64:65753] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f9587753d60] -/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fd6f5aebd60] -[ionos1-amd64:65754] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fd6f5aebce1] -[ionos1-amd64:65754] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fd6f5ad5537] -[ionos1-amd64:65754] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f63883b3d60] -[ionos1-amd64:65755] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f63883b3ce1] -[ionos1-amd64:65755] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f638839d537] -[ionos1-amd64:65755] [ 3] [ionos1-amd64:65753] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f9587753ce1] -[ionos1-amd64:65753] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f63887427ec] -[ionos1-amd64:65755] [ 4] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f958773d537] -[ionos1-amd64:65753] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fd6f5e7a7ec] -[ionos1-amd64:65754] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f9587ae27ec] -[ionos1-amd64:65753] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f638874d966] -[ionos1-amd64:65755] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fd6f5e85966] -[ionos1-amd64:65754] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f638874d9d1] -[ionos1-amd64:65755] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f9587aed966] -[ionos1-amd64:65753] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fd6f5e859d1] -[ionos1-amd64:65754] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f9587aed9d1] -[ionos1-amd64:65753] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f638874dc65] -[ionos1-amd64:65755] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fd6f5e85c65] -[ionos1-amd64:65754] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f9587aedc65] -[ionos1-amd64:65753] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f63889fa813] -[ionos1-amd64:65755] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fd6f6132813] -[ionos1-amd64:65754] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f9587d9a813] -[ionos1-amd64:65753] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f6388d2d9fe] -[ionos1-amd64:65755] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fd6f64659fe] -[ionos1-amd64:65754] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f95880cd9fe] -[ionos1-amd64:65753] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f6388d119cf] -[ionos1-amd64:65755] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fd6f64499cf] -[ionos1-amd64:65754] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f95880b19cf] -[ionos1-amd64:65753] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fd6f64360b7] -[ionos1-amd64:65754] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f6388cfe0b7] -[ionos1-amd64:65755] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f958809e0b7] -[ionos1-amd64:65753] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f6388cf4132] -[ionos1-amd64:65755] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fd6f642c132] -[ionos1-amd64:65754] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f9588094132] -[ionos1-amd64:65753] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fd6f61fbfa9] -[ionos1-amd64:65754] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f6388ac3fa9] -[ionos1-amd64:65755] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f9587e63fa9] -[ionos1-amd64:65753] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f6388b11bb2] -[ionos1-amd64:65755] [14] ./demo_stokes-taylor-hood(+0x9e87)[0x556142822e87] -[ionos1-amd64:65755] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fd6f6249bb2] -[ionos1-amd64:65754] [14] ./demo_stokes-taylor-hood(+0x9e87)[0x5640d26b8e87] -[ionos1-amd64:65754] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f638839ed0a] -[ionos1-amd64:65755] [16] ./demo_stokes-taylor-hood(+0xa2aa)[0x5561428232aa] -/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fd6f5ad6d0a] -[ionos1-amd64:65754] [16] ./demo_stokes-taylor-hood(+0xa2aa)[0x5640d26b92aa] -[ionos1-amd64:65754] *** End of error message *** -[ionos1-amd64:65755] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f9587eb1bb2] -[ionos1-amd64:65753] [14] ./demo_stokes-taylor-hood(+0x9e87)[0x5600d92fbe87] -[ionos1-amd64:65753] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f958773ed0a] -[ionos1-amd64:65753] [16] ./demo_stokes-taylor-hood(+0xa2aa)[0x5600d92fc2aa] -[ionos1-amd64:65753] *** End of error message *** +[i-capture-the-hostname:451828] *** Process received signal *** +[i-capture-the-hostname:451828] Signal: Aborted (6) +[i-capture-the-hostname:451828] Signal code: (-6) +[i-capture-the-hostname:451828] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f62c8383d60] +[i-capture-the-hostname:451828] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f62c8383ce1] +[i-capture-the-hostname:451828] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f62c836d537] +[i-capture-the-hostname:451828] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f62c87127ec] +[i-capture-the-hostname:451828] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f62c871d966] +[i-capture-the-hostname:451828] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f62c871d9d1] +[i-capture-the-hostname:451828] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f62c871dc65] +[i-capture-the-hostname:451828] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f62c8afa813] +[i-capture-the-hostname:451828] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f62c8e2d9fe] +[i-capture-the-hostname:451828] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f62c8e119cf] +[i-capture-the-hostname:451828] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f62c8dfe0b7] +[i-capture-the-hostname:451828] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f62c8df4132] +[i-capture-the-hostname:451828] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f62c8bc3fa9] +[i-capture-the-hostname:451828] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f62c8c11bb2] +[i-capture-the-hostname:451828] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f62c8c13790] +[i-capture-the-hostname:451828] [15] ./demo_biharmonic(+0x8a39)[0x56383a4e0a39] +[i-capture-the-hostname:451828] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f62c836ed0a] +[i-capture-the-hostname:451828] [17] ./demo_biharmonic(+0x8c4a)[0x56383a4e0c4a] +[i-capture-the-hostname:451828] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7feab4c0b790] +[i-capture-the-hostname:451808] [15] ./demo_biharmonic(+0x8a39)[0x55d3b338ca39] +[i-capture-the-hostname:451808] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7feab4366d0a] +[i-capture-the-hostname:451808] [17] ./demo_biharmonic(+0x8c4a)[0x55d3b338cc4a] +[i-capture-the-hostname:451808] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fe560f060b7] +[i-capture-the-hostname:451852] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fe560efc132] +[i-capture-the-hostname:451852] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fe560ccbfa9] +[i-capture-the-hostname:451852] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fe560d19bb2] +[i-capture-the-hostname:451852] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fe560d1b790] +[i-capture-the-hostname:451852] [15] ./demo_biharmonic(+0x8a39)[0x561f0f0fca39] +[i-capture-the-hostname:451852] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fe560476d0a] +[i-capture-the-hostname:451852] [17] ./demo_biharmonic(+0x8c4a)[0x561f0f0fcc4a] +[i-capture-the-hostname:451852] *** End of error message *** -------------------------------------------------------------------------- -mpirun noticed that process rank 2 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- + Start 34: demo_advection-diffusion_mpi +13/49 Test #27: demo_singular-poisson_mpi .............. Passed 0.90 sec + Start 36: demo_ale_mpi +14/49 Test #15: demo_navier-stokes_mpi ................. Passed 2.50 sec Start 38: demo_auto-adaptive-navier-stokes_mpi -16/49 Test #19: demo_nonlinear-poisson_mpi .............***Failed 2.49 sec -Process 0: Solving nonlinear variational problem. -Process 1: Solving nonlinear variational problem. -Process 2: Solving nonlinear variational problem. - Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 0: Newton iteration 0: r (abs) = 1.247e+01 (tol = 1.000e-10) r (rel) = 1.000e+00 (tol = 1.000e-06) +15/49 Test #32: demo_subdomains_mpi .................... Passed 0.55 sec + Start 40: demo_block-matrix_mpi +16/49 Test #29: demo_stokes-iterative_mpi ..............***Failed 1.17 sec +*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. +*** This is disallowed by the MPI standard. +*** Your MPI job will now abort. +[i-capture-the-hostname:453304] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! +*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. +*** This is disallowed by the MPI standard. +*** Your MPI job will now abort. +[i-capture-the-hostname:453306] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! +*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. +*** This is disallowed by the MPI standard. +*** Your MPI job will now abort. +[i-capture-the-hostname:453305] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! +-------------------------------------------------------------------------- +Primary job terminated normally, but 1 process returned +a non-zero exit code. Per user-direction, the job has been aborted. +-------------------------------------------------------------------------- +-------------------------------------------------------------------------- +mpirun detected that one or more processes exited with non-zero status, thus causing +the job to be terminated. The first process to do so was: + + Process name: [[26618,1],0] + Exit code: 1 +-------------------------------------------------------------------------- + + Start 42: demo_conditional_mpi +17/49 Test #34: demo_advection-diffusion_mpi ...........***Failed 0.61 sec +Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +terminate called after throwing an instance of 'std::runtime_error' terminate called after throwing an instance of 'std::runtime_error' what(): @@ -9398,19 +9440,7 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65677] *** Process received signal *** -[ionos1-amd64:65677] Signal: Aborted (6) -[ionos1-amd64:65677] Signal code: (-6) -[ionos1-amd64:65677] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fe0eb003d60] -[ionos1-amd64:65677] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fe0eb003ce1] -[ionos1-amd64:65677] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fe0eafed537] -[ionos1-amd64:65677] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fe0eb3927ec] -[ionos1-amd64:65677] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fe0eb39d966] -[ionos1-amd64:65677] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fe0eb39d9d1] -[ionos1-amd64:65677] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fe0eb39dc65] -[ionos1-amd64:65677] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fe0eb77a813] -[ionos1-amd64:65677] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fe0ebaad9fe] -[ionos1-amd64:65677] [ 9] terminate called after throwing an instance of 'std::runtime_error' +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9426,25 +9456,12 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 1 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65674] *** Process received signal *** -[ionos1-amd64:65674] Signal: Aborted (6) -[ionos1-amd64:65674] Signal code: (-6) -[ionos1-amd64:65674] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f3cb894bd60] -[ionos1-amd64:65674] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f3cb894bce1] -[ionos1-amd64:65674] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f3cb8935537] -[ionos1-amd64:65674] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f3cb8cda7ec] -[ionos1-amd64:65674] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f3cb8ce5966] -[ionos1-amd64:65674] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f3cb8ce59d1] -[ionos1-amd64:65674] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f3cb8ce5c65] -[ionos1-amd64:65674] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f3cb90c2813] -[ionos1-amd64:65674] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f3cb93f59fe] -[ionos1-amd64:65674] [ 9] terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9460,104 +9477,91 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 1 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65675] *** Process received signal *** -[ionos1-amd64:65675] Signal: Aborted (6) -[ionos1-amd64:65675] Signal code: (-6) -[ionos1-amd64:65675] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f4d91323d60] -[ionos1-amd64:65675] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f4d91323ce1] -[ionos1-amd64:65675] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f4d9130d537] -[ionos1-amd64:65675] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f4d916b27ec] -[ionos1-amd64:65675] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f4d916bd966] -[ionos1-amd64:65675] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f4d916bd9d1] -[ionos1-amd64:65675] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f4d916bdc65] -[ionos1-amd64:65675] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f4d91a9a813] -[ionos1-amd64:65675] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f4d91dcd9fe] -[ionos1-amd64:65675] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f4d91db19cf] -[ionos1-amd64:65675] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f4d91d9e0b7] -[ionos1-amd64:65675] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f4d91d9404b] -[ionos1-amd64:65675] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7f4d91e85860] -[ionos1-amd64:65675] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin26NonlinearVariationalSolver5solveEv+0x439)[0x7f4d91b959f9] -[ionos1-amd64:65675] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EERKNS_4FormENS_10ParametersE+0x4b6)[0x7f4d91bb2ef6] -[ionos1-amd64:65675] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCERKNS_4FormENS_10ParametersE+0x85)[0x7f4d91bb3915] -[ionos1-amd64:65675] [16] ./demo_nonlinear-poisson(+0x7aca)[0x556c53c92aca] -[ionos1-amd64:65675] [17] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f4d9130ed0a] -[ionos1-amd64:65675] [18] ./demo_nonlinear-poisson(+0x7cfa)[0x556c53c92cfa] -[ionos1-amd64:65675] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fe0eba919cf] -[ionos1-amd64:65677] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fe0eba7e0b7] -[ionos1-amd64:65677] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7fe0eba7404b] -[ionos1-amd64:65677] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7fe0ebb65860] -[ionos1-amd64:65677] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin26NonlinearVariationalSolver5solveEv+0x439)[0x7fe0eb8759f9] -[ionos1-amd64:65677] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EERKNS_4FormENS_10ParametersE+0x4b6)[0x7fe0eb892ef6] -[ionos1-amd64:65677] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f3cb93d99cf] -[ionos1-amd64:65674] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f3cb93c60b7] -[ionos1-amd64:65674] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f3cb93bc04b] -[ionos1-amd64:65674] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12NewtonSolver5solveERNS_16NonlinearProblemERNS_13GenericVectorE+0x7f0)[0x7f3cb94ad860] -[ionos1-amd64:65674] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin26NonlinearVariationalSolver5solveEv+0x439)[0x7f3cb91bd9f9] -[ionos1-amd64:65674] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EERKNS_4FormENS_10ParametersE+0x4b6)[0x7f3cb91daef6] -[ionos1-amd64:65674] [15] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCERKNS_4FormENS_10ParametersE+0x85)[0x7f3cb91db915] -[ionos1-amd64:65674] [16] ./demo_nonlinear-poisson(+0x7aca)[0x55bd8989eaca] -[ionos1-amd64:65674] [17] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f3cb8936d0a] -[ionos1-amd64:65674] [18] ./demo_nonlinear-poisson(+0x7cfa)[0x55bd8989ecfa] -[ionos1-amd64:65674] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCERKNS_4FormENS_10ParametersE+0x85)[0x7fe0eb893915] -[ionos1-amd64:65677] [16] ./demo_nonlinear-poisson(+0x7aca)[0x5564ed8bdaca] -[ionos1-amd64:65677] [17] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fe0eafeed0a] -[ionos1-amd64:65677] [18] ./demo_nonlinear-poisson(+0x7cfa)[0x5564ed8bdcfa] -[ionos1-amd64:65677] *** End of error message *** +[i-capture-the-hostname:453342] *** Process received signal *** +[i-capture-the-hostname:453342] Signal: Aborted (6) +[i-capture-the-hostname:453342] Signal code: (-6) +[i-capture-the-hostname:453340] *** Process received signal *** +[i-capture-the-hostname:453340] Signal: Aborted (6) +[i-capture-the-hostname:453340] Signal code: (-6) +[i-capture-the-hostname:453339] *** Process received signal *** +[i-capture-the-hostname:453339] Signal: Aborted (6) +[i-capture-the-hostname:453339] Signal code: (-6) +[i-capture-the-hostname:453342] [ 0] [i-capture-the-hostname:453340] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f48dfbc3d60] +[i-capture-the-hostname:453342] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f075ab3bd60] +[i-capture-the-hostname:453340] [ 1] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f075ab3bce1] +[i-capture-the-hostname:453340] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f48dfbc3ce1] +[i-capture-the-hostname:453342] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f48dfbad537] +[i-capture-the-hostname:453342] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f075ab25537] +[i-capture-the-hostname:453340] [ 3] [i-capture-the-hostname:453339] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f2a525e3d60] +[i-capture-the-hostname:453339] [ 1] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f075aeca7ec] +[i-capture-the-hostname:453340] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f48dff527ec] +[i-capture-the-hostname:453342] [ 4] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f2a525e3ce1] +[i-capture-the-hostname:453339] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f48dff5d966] +[i-capture-the-hostname:453342] [ 5] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f2a525cd537] +[i-capture-the-hostname:453339] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f075aed5966] +[i-capture-the-hostname:453340] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f48dff5d9d1] +[i-capture-the-hostname:453342] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f2a529727ec] +[i-capture-the-hostname:453339] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f075aed59d1] +[i-capture-the-hostname:453340] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f48dff5dc65] +[i-capture-the-hostname:453342] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f2a5297d966] +[i-capture-the-hostname:453339] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f075aed5c65] +[i-capture-the-hostname:453340] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f2a5297d9d1] +[i-capture-the-hostname:453339] [ 6] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f48e033a813] +[i-capture-the-hostname:453342] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f2a5297dc65] +[i-capture-the-hostname:453339] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f075b2b2813] +[i-capture-the-hostname:453340] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f48e066d9fe] +[i-capture-the-hostname:453342] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f2a52d5a813] +[i-capture-the-hostname:453339] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f075b5e59fe] +[i-capture-the-hostname:453340] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f2a5308d9fe] +[i-capture-the-hostname:453339] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f48e06519cf] +[i-capture-the-hostname:453342] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f075b5c99cf] +[i-capture-the-hostname:453340] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f48e063e0b7] +[i-capture-the-hostname:453342] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f2a530719cf] +[i-capture-the-hostname:453339] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f075b5b60b7] +[i-capture-the-hostname:453340] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f48e063404b] +[i-capture-the-hostname:453342] [12] ./demo_advection-diffusion(+0x10246)[0x563ace7c3246] +[i-capture-the-hostname:453342] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f48dfbaed0a] +[i-capture-the-hostname:453342] [14] ./demo_advection-diffusion(+0x1055a)[0x563ace7c355a] +[i-capture-the-hostname:453342] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f2a5305e0b7] +[i-capture-the-hostname:453339] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f075b5ac04b] +[i-capture-the-hostname:453340] [12] ./demo_advection-diffusion(+0x10246)[0x55774d0e6246] +[i-capture-the-hostname:453340] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f075ab26d0a] +[i-capture-the-hostname:453340] [14] ./demo_advection-diffusion(+0x1055a)[0x55774d0e655a] +[i-capture-the-hostname:453340] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f2a5305404b] +[i-capture-the-hostname:453339] [12] ./demo_advection-diffusion(+0x10246)[0x55fa99ef7246] +[i-capture-the-hostname:453339] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f2a525ced0a] +[i-capture-the-hostname:453339] [14] ./demo_advection-diffusion(+0x1055a)[0x55fa99ef755a] +[i-capture-the-hostname:453339] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 2 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 2 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 40: demo_block-matrix_mpi -17/49 Test #32: demo_subdomains_mpi .................... Passed 0.49 sec - Start 42: demo_conditional_mpi -18/49 Test #36: demo_ale_mpi ........................... Passed 0.53 sec Start 44: demo_contact-vi-snes_mpi -19/49 Test #38: demo_auto-adaptive-navier-stokes_mpi ... Passed 0.43 sec +18/49 Test #36: demo_ale_mpi ........................... Passed 0.51 sec Start 46: demo_contact-vi-tao_mpi -20/49 Test #40: demo_block-matrix_mpi .................. Passed 0.57 sec +19/49 Test #38: demo_auto-adaptive-navier-stokes_mpi ... Passed 0.52 sec Start 48: demo_curl-curl_mpi -21/49 Test #48: demo_curl-curl_mpi .....................***Failed 0.11 sec -*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. -*** This is disallowed by the MPI standard. -*** Your MPI job will now abort. -[ionos1-amd64:65881] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! --------------------------------------------------------------------------- -Primary job terminated normally, but 1 process returned -a non-zero exit code. Per user-direction, the job has been aborted. --------------------------------------------------------------------------- -*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. -*** This is disallowed by the MPI standard. -*** Your MPI job will now abort. -[ionos1-amd64:65882] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! --------------------------------------------------------------------------- -mpirun detected that one or more processes exited with non-zero status, thus causing -the job to be terminated. The first process to do so was: - - Process name: [[48557,1],0] - Exit code: 1 --------------------------------------------------------------------------- - +20/49 Test #40: demo_block-matrix_mpi .................. Passed 0.53 sec Start 49: demo_dg-advection-diffusion_mpi -22/49 Test #44: demo_contact-vi-snes_mpi ............... Passed 0.77 sec - Start 51: demo_dg-poisson_mpi -23/49 Test #46: demo_contact-vi-tao_mpi ................ Passed 0.71 sec - Start 53: demo_elasticity_mpi -24/49 Test #34: demo_advection-diffusion_mpi ...........***Failed 1.62 sec -Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +21/49 Test #42: demo_conditional_mpi ...................***Failed 0.55 sec +Process 0: Solving linear variational problem. +Process 1: Solving linear variational problem. +Process 2: Solving linear variational problem. + Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -9580,25 +9584,28 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65782] *** Process received signal *** -[ionos1-amd64:65782] Signal: Aborted (6) -[ionos1-amd64:65782] Signal code: (-6) -[ionos1-amd64:65782] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fe846293d60] -[ionos1-amd64:65782] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fe846293ce1] -[ionos1-amd64:65782] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fe84627d537] -[ionos1-amd64:65782] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fe8466227ec] -[ionos1-amd64:65782] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fe84662d966] -[ionos1-amd64:65782] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fe84662d9d1] -[ionos1-amd64:65782] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fe84662dc65] -[ionos1-amd64:65782] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fe846a0a813] -[ionos1-amd64:65782] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fe846d3d9fe] -[ionos1-amd64:65782] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fe846d219cf] -[ionos1-amd64:65782] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fe846d0e0b7] -[ionos1-amd64:65782] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7fe846d0404b] -[ionos1-amd64:65782] [12] ./demo_advection-diffusion(+0x10246)[0x55680932f246] -[ionos1-amd64:65782] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fe84627ed0a] -[ionos1-amd64:65782] [14] ./demo_advection-diffusion(+0x1055a)[0x55680932f55a] -[ionos1-amd64:65782] *** End of error message *** +[i-capture-the-hostname:453411] *** Process received signal *** +[i-capture-the-hostname:453411] Signal: Aborted (6) +[i-capture-the-hostname:453411] Signal code: (-6) +[i-capture-the-hostname:453411] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f849c323d60] +[i-capture-the-hostname:453411] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f849c323ce1] +[i-capture-the-hostname:453411] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f849c30d537] +[i-capture-the-hostname:453411] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f849c6b27ec] +[i-capture-the-hostname:453411] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f849c6bd966] +[i-capture-the-hostname:453411] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f849c6bd9d1] +[i-capture-the-hostname:453411] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f849c6bdc65] +[i-capture-the-hostname:453411] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f849ca9a813] +[i-capture-the-hostname:453411] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f849cdcd9fe] +[i-capture-the-hostname:453411] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f849cdb19cf] +[i-capture-the-hostname:453411] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f849cd9e0b7] +[i-capture-the-hostname:453411] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f849cd94132] +[i-capture-the-hostname:453411] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f849cb63fa9] +[i-capture-the-hostname:453411] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f849cbb1bb2] +[i-capture-the-hostname:453411] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f849cbb3790] +[i-capture-the-hostname:453411] [15] ./demo_conditional(+0x6876)[0x55ebf555d876] +[i-capture-the-hostname:453411] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f849c30ed0a] +[i-capture-the-hostname:453411] [17] ./demo_conditional(+0x6a5a)[0x55ebf555da5a] +[i-capture-the-hostname:453411] *** End of error message *** terminate called after throwing an instance of 'std::runtime_error' what(): @@ -9621,25 +9628,28 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65783] *** Process received signal *** -[ionos1-amd64:65783] Signal: Aborted (6) -[ionos1-amd64:65783] Signal code: (-6) -[ionos1-amd64:65783] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7faba55b3d60] -[ionos1-amd64:65783] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7faba55b3ce1] -[ionos1-amd64:65783] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7faba559d537] -[ionos1-amd64:65783] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7faba59427ec] -[ionos1-amd64:65783] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7faba594d966] -[ionos1-amd64:65783] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7faba594d9d1] -[ionos1-amd64:65783] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7faba594dc65] -[ionos1-amd64:65783] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7faba5d2a813] -[ionos1-amd64:65783] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7faba605d9fe] -[ionos1-amd64:65783] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7faba60419cf] -[ionos1-amd64:65783] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7faba602e0b7] -[ionos1-amd64:65783] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7faba602404b] -[ionos1-amd64:65783] [12] ./demo_advection-diffusion(+0x10246)[0x5573abbf7246] -[ionos1-amd64:65783] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7faba559ed0a] -[ionos1-amd64:65783] [14] ./demo_advection-diffusion(+0x1055a)[0x5573abbf755a] -[ionos1-amd64:65783] *** End of error message *** +[i-capture-the-hostname:453413] *** Process received signal *** +[i-capture-the-hostname:453413] Signal: Aborted (6) +[i-capture-the-hostname:453413] Signal code: (-6) +[i-capture-the-hostname:453413] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fe5d402bd60] +[i-capture-the-hostname:453413] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fe5d402bce1] +[i-capture-the-hostname:453413] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fe5d4015537] +[i-capture-the-hostname:453413] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fe5d43ba7ec] +[i-capture-the-hostname:453413] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fe5d43c5966] +[i-capture-the-hostname:453413] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fe5d43c59d1] +[i-capture-the-hostname:453413] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fe5d43c5c65] +[i-capture-the-hostname:453413] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fe5d47a2813] +[i-capture-the-hostname:453413] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fe5d4ad59fe] +[i-capture-the-hostname:453413] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fe5d4ab99cf] +[i-capture-the-hostname:453413] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fe5d4aa60b7] +[i-capture-the-hostname:453413] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fe5d4a9c132] +[i-capture-the-hostname:453413] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fe5d486bfa9] +[i-capture-the-hostname:453413] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fe5d48b9bb2] +[i-capture-the-hostname:453413] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fe5d48bb790] +[i-capture-the-hostname:453413] [15] ./demo_conditional(+0x6876)[0x55c42d161876] +[i-capture-the-hostname:453413] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fe5d4016d0a] +[i-capture-the-hostname:453413] [17] ./demo_conditional(+0x6a5a)[0x55c42d161a5a] +[i-capture-the-hostname:453413] *** End of error message *** terminate called after throwing an instance of 'std::runtime_error' what(): @@ -9662,41 +9672,46 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65781] *** Process received signal *** -[ionos1-amd64:65781] Signal: Aborted (6) -[ionos1-amd64:65781] Signal code: (-6) -[ionos1-amd64:65781] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f011bdebd60] -[ionos1-amd64:65781] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f011bdebce1] -[ionos1-amd64:65781] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f011bdd5537] -[ionos1-amd64:65781] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f011c17a7ec] -[ionos1-amd64:65781] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f011c185966] -[ionos1-amd64:65781] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f011c1859d1] -[ionos1-amd64:65781] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f011c185c65] -[ionos1-amd64:65781] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f011c562813] -[ionos1-amd64:65781] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f011c8959fe] -[ionos1-amd64:65781] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f011c8799cf] -[ionos1-amd64:65781] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f011c8660b7] -[ionos1-amd64:65781] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERNS_13GenericVectorERKS1_+0x8b)[0x7f011c85c04b] -[ionos1-amd64:65781] [12] ./demo_advection-diffusion(+0x10246)[0x56448d953246] -[ionos1-amd64:65781] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f011bdd6d0a] -[ionos1-amd64:65781] [14] ./demo_advection-diffusion(+0x1055a)[0x56448d95355a] -[ionos1-amd64:65781] *** End of error message *** +[i-capture-the-hostname:453409] *** Process received signal *** +[i-capture-the-hostname:453409] Signal: Aborted (6) +[i-capture-the-hostname:453409] Signal code: (-6) +[i-capture-the-hostname:453409] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f74b1683d60] +[i-capture-the-hostname:453409] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f74b1683ce1] +[i-capture-the-hostname:453409] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f74b166d537] +[i-capture-the-hostname:453409] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f74b1a127ec] +[i-capture-the-hostname:453409] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f74b1a1d966] +[i-capture-the-hostname:453409] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f74b1a1d9d1] +[i-capture-the-hostname:453409] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f74b1a1dc65] +[i-capture-the-hostname:453409] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f74b1dfa813] +[i-capture-the-hostname:453409] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f74b212d9fe] +[i-capture-the-hostname:453409] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f74b21119cf] +[i-capture-the-hostname:453409] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f74b20fe0b7] +[i-capture-the-hostname:453409] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f74b20f4132] +[i-capture-the-hostname:453409] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f74b1ec3fa9] +[i-capture-the-hostname:453409] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f74b1f11bb2] +[i-capture-the-hostname:453409] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f74b1f13790] +[i-capture-the-hostname:453409] [15] ./demo_conditional(+0x6876)[0x5583658d1876] +[i-capture-the-hostname:453409] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f74b166ed0a] +[i-capture-the-hostname:453409] [17] ./demo_conditional(+0x6a5a)[0x5583658d1a5a] +[i-capture-the-hostname:453409] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 2 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 56: demo_eval_mpi -25/49 Test #51: demo_dg-poisson_mpi ....................***Failed 0.46 sec + Start 51: demo_dg-poisson_mpi +22/49 Test #46: demo_contact-vi-tao_mpi ................ Passed 0.68 sec + Start 53: demo_elasticity_mpi +23/49 Test #30: demo_stokes-taylor-hood_mpi ............***Failed 1.65 sec +Process 2: Solving linear variational problem. Process 0: Solving linear variational problem. Process 1: Solving linear variational problem. -Process 2: Solving linear variational problem. - Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -9713,35 +9728,16 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 1 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65903] *** Process received signal *** -[ionos1-amd64:65903] Signal: Aborted (6) -[ionos1-amd64:65903] Signal code: (-6) -[ionos1-amd64:65903] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f375136bd60] -[ionos1-amd64:65903] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f375136bce1] -[ionos1-amd64:65903] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f3751355537] -[ionos1-amd64:65903] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f37516fa7ec] -[ionos1-amd64:65903] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f3751705966] -[ionos1-amd64:65903] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f37517059d1] -[ionos1-amd64:65903] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f3751705c65] -[ionos1-amd64:65903] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f3751ae2813] -[ionos1-amd64:65903] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f3751e159fe] -[ionos1-amd64:65903] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f3751df99cf] -[ionos1-amd64:65903] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f3751de60b7] -[ionos1-amd64:65903] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f3751ddc132] -[ionos1-amd64:65903] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f3751babfa9] -[ionos1-amd64:65903] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f3751bf9bb2] -[ionos1-amd64:65903] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionENS_10ParametersE+0x5a)[0x7f3751bfb6ca] -[ionos1-amd64:65903] [15] ./demo_dg-poisson(+0x9b6b)[0x55cec0417b6b] -[ionos1-amd64:65903] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f3751356d0a] -[ionos1-amd64:65903] [17] ./demo_dg-poisson(+0x9dba)[0x55cec0417dba] -[ionos1-amd64:65903] *** End of error message *** +[i-capture-the-hostname:453319] *** Process received signal *** terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453319] Signal: Aborted (6) +[i-capture-the-hostname:453319] Signal code: (-6) what(): *** ------------------------------------------------------------------------- @@ -9757,29 +9753,18 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 1 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65904] *** Process received signal *** -[ionos1-amd64:65904] Signal: Aborted (6) -[ionos1-amd64:65904] Signal code: (-6) -[ionos1-amd64:65904] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f68145d3d60] -[ionos1-amd64:65904] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f68145d3ce1] -[ionos1-amd64:65904] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f68145bd537] -[ionos1-amd64:65904] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f68149627ec] -[ionos1-amd64:65904] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f681496d966] -[ionos1-amd64:65904] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f681496d9d1] -[ionos1-amd64:65904] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f681496dc65] -[ionos1-amd64:65904] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f6814d4a813] -[ionos1-amd64:65904] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f681507d9fe] -[ionos1-amd64:65904] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f68150619cf] -[ionos1-amd64:65904] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f681504e0b7] -[ionos1-amd64:65904] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f6815044132] -[ionos1-amd64:65904] [12] terminate called after throwing an instance of 'std::runtime_error' - what(): +[i-capture-the-hostname:453320] *** Process received signal *** +[i-capture-the-hostname:453319] [ 0] [i-capture-the-hostname:453320] Signal: Aborted (6) +[i-capture-the-hostname:453320] Signal code: (-6) +terminate called after throwing an instance of 'std::runtime_error' +/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fa71ae2bd60] +[i-capture-the-hostname:453319] [ 1] what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -9794,59 +9779,119 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65905] *** Process received signal *** -[ionos1-amd64:65905] Signal: Aborted (6) -[ionos1-amd64:65905] Signal code: (-6) -[ionos1-amd64:65905] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f1fd8b83d60] -[ionos1-amd64:65905] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f1fd8b83ce1] -[ionos1-amd64:65905] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f1fd8b6d537] -[ionos1-amd64:65905] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f1fd8f127ec] -[ionos1-amd64:65905] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f1fd8f1d966] -[ionos1-amd64:65905] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f1fd8f1d9d1] -[ionos1-amd64:65905] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f1fd8f1dc65] -[ionos1-amd64:65905] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f1fd92fa813] -[ionos1-amd64:65905] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f1fd962d9fe] -[ionos1-amd64:65905] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f1fd96119cf] -[ionos1-amd64:65905] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f1fd95fe0b7] -[ionos1-amd64:65905] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f1fd95f4132] -[ionos1-amd64:65905] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f1fd93c3fa9] -[ionos1-amd64:65905] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f1fd9411bb2] -[ionos1-amd64:65905] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionENS_10ParametersE+0x5a)[0x7f1fd94136ca] -[ionos1-amd64:65905] [15] ./demo_dg-poisson(+0x9b6b)[0x564553459b6b] -[ionos1-amd64:65905] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f1fd8b6ed0a] -[ionos1-amd64:65905] [17] ./demo_dg-poisson(+0x9dba)[0x564553459dba] -[ionos1-amd64:65905] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f6814e13fa9] -[ionos1-amd64:65904] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f6814e61bb2] -[ionos1-amd64:65904] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionENS_10ParametersE+0x5a)[0x7f6814e636ca] -[ionos1-amd64:65904] [15] ./demo_dg-poisson(+0x9b6b)[0x560d9e903b6b] -[ionos1-amd64:65904] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f68145bed0a] -[ionos1-amd64:65904] [17] ./demo_dg-poisson(+0x9dba)[0x560d9e903dba] -[ionos1-amd64:65904] *** End of error message *** +/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fa71ae2bce1] +[i-capture-the-hostname:453319] [ 2] [i-capture-the-hostname:453320] [ 0] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fa71ae15537] +[i-capture-the-hostname:453319] [ 3] [i-capture-the-hostname:453318] *** Process received signal *** +[i-capture-the-hostname:453318] Signal: Aborted (6) +[i-capture-the-hostname:453318] Signal code: (-6) +/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fbca4f5bd60] +[i-capture-the-hostname:453320] [ 1] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fa71b1ba7ec] +[i-capture-the-hostname:453319] [ 4] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fbca4f5bce1] +[i-capture-the-hostname:453320] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fbca4f45537] +[i-capture-the-hostname:453320] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fa71b1c5966] +[i-capture-the-hostname:453319] [ 5] [i-capture-the-hostname:453318] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fbca52ea7ec] +[i-capture-the-hostname:453320] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f145a503d60] +[i-capture-the-hostname:453318] [ 1] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fa71b1c59d1] +[i-capture-the-hostname:453319] [ 6] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f145a503ce1] +[i-capture-the-hostname:453318] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fa71b1c5c65] +[i-capture-the-hostname:453319] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fbca52f5966] +[i-capture-the-hostname:453320] [ 5] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f145a4ed537] +[i-capture-the-hostname:453318] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fbca52f59d1] +[i-capture-the-hostname:453320] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f145a8927ec] +[i-capture-the-hostname:453318] [ 4] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fa71b472813] +[i-capture-the-hostname:453319] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f145a89d966] +[i-capture-the-hostname:453318] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fbca52f5c65] +[i-capture-the-hostname:453320] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f145a89d9d1] +[i-capture-the-hostname:453318] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f145a89dc65] +[i-capture-the-hostname:453318] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fbca55a2813] +[i-capture-the-hostname:453320] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fa71b7a59fe] +[i-capture-the-hostname:453319] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f145ab4a813] +[i-capture-the-hostname:453318] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fa71b7899cf] +[i-capture-the-hostname:453319] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fbca58d59fe] +[i-capture-the-hostname:453320] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f145ae7d9fe] +[i-capture-the-hostname:453318] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fa71b7760b7] +[i-capture-the-hostname:453319] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fbca58b99cf] +[i-capture-the-hostname:453320] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fa71b76c132] +[i-capture-the-hostname:453319] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f145ae619cf] +[i-capture-the-hostname:453318] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fbca58a60b7] +[i-capture-the-hostname:453320] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fa71b53bfa9] +[i-capture-the-hostname:453319] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f145ae4e0b7] +[i-capture-the-hostname:453318] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fbca589c132] +[i-capture-the-hostname:453320] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fa71b589bb2] +[i-capture-the-hostname:453319] [14] ./demo_stokes-taylor-hood(+0x9e87)[0x557d1c970e87] +[i-capture-the-hostname:453319] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fa71ae16d0a] +[i-capture-the-hostname:453319] [16] ./demo_stokes-taylor-hood(+0xa2aa)[0x557d1c9712aa] +[i-capture-the-hostname:453319] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fbca566bfa9] +[i-capture-the-hostname:453320] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f145ae44132] +[i-capture-the-hostname:453318] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f145ac13fa9] +[i-capture-the-hostname:453318] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fbca56b9bb2] +[i-capture-the-hostname:453320] [14] ./demo_stokes-taylor-hood(+0x9e87)[0x561a46ae5e87] +[i-capture-the-hostname:453320] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fbca4f46d0a] +[i-capture-the-hostname:453320] [16] ./demo_stokes-taylor-hood(+0xa2aa)[0x561a46ae62aa] +[i-capture-the-hostname:453320] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f145ac61bb2] +[i-capture-the-hostname:453318] [14] ./demo_stokes-taylor-hood(+0x9e87)[0x5604bb241e87] +[i-capture-the-hostname:453318] [15] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f145a4eed0a] +[i-capture-the-hostname:453318] [16] ./demo_stokes-taylor-hood(+0xa2aa)[0x5604bb2422aa] +[i-capture-the-hostname:453318] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 0 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 2 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- + Start 56: demo_eval_mpi +24/49 Test #44: demo_contact-vi-snes_mpi ............... Passed 0.99 sec Start 58: demo_extrapolation_mpi -26/49 Test #42: demo_conditional_mpi ...................***Failed 1.53 sec -Process 1: Solving linear variational problem. +25/49 Test #56: demo_eval_mpi .......................... Passed 0.49 sec + Start 60: demo_functional_mpi +26/49 Test #58: demo_extrapolation_mpi ................. Passed 0.50 sec + Start 62: demo_gmg-poisson_mpi +27/49 Test #48: demo_curl-curl_mpi .....................***Failed 1.18 sec +*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. +*** This is disallowed by the MPI standard. +*** Your MPI job will now abort. +[i-capture-the-hostname:453471] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! +*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. +*** This is disallowed by the MPI standard. +*** Your MPI job will now abort. +[i-capture-the-hostname:453473] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! +-------------------------------------------------------------------------- +Primary job terminated normally, but 1 process returned +a non-zero exit code. Per user-direction, the job has been aborted. +-------------------------------------------------------------------------- +*** The MPI_Comm_rank() function was called before MPI_INIT was invoked. +*** This is disallowed by the MPI standard. +*** Your MPI job will now abort. +[i-capture-the-hostname:453475] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! +-------------------------------------------------------------------------- +mpirun detected that one or more processes exited with non-zero status, thus causing +the job to be terminated. The first process to do so was: + + Process name: [[26112,1],0] + Exit code: 1 +-------------------------------------------------------------------------- + + Start 64: demo_lift-drag_mpi +28/49 Test #60: demo_functional_mpi .................... Passed 0.48 sec + Start 66: demo_mesh-quality_mpi +29/49 Test #51: demo_dg-poisson_mpi ....................***Failed 1.51 sec Process 2: Solving linear variational problem. Process 0: Solving linear variational problem. +Process 1: Solving linear variational problem. Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' -terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9868,9 +9913,29 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65828] *** Process received signal *** -[ionos1-amd64:65828] Signal: Aborted (6) -[ionos1-amd64:65828] Signal code: (-6) +[i-capture-the-hostname:453479] *** Process received signal *** +[i-capture-the-hostname:453479] Signal: Aborted (6) +[i-capture-the-hostname:453479] Signal code: (-6) +[i-capture-the-hostname:453479] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fec2df23d60] +[i-capture-the-hostname:453479] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fec2df23ce1] +[i-capture-the-hostname:453479] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fec2df0d537] +[i-capture-the-hostname:453479] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fec2e2b27ec] +[i-capture-the-hostname:453479] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fec2e2bd966] +[i-capture-the-hostname:453479] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fec2e2bd9d1] +[i-capture-the-hostname:453479] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fec2e2bdc65] +[i-capture-the-hostname:453479] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fec2e69a813] +[i-capture-the-hostname:453479] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fec2e9cd9fe] +[i-capture-the-hostname:453479] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fec2e9b19cf] +[i-capture-the-hostname:453479] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fec2e99e0b7] +[i-capture-the-hostname:453479] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fec2e994132] +[i-capture-the-hostname:453479] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fec2e763fa9] +[i-capture-the-hostname:453479] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fec2e7b1bb2] +[i-capture-the-hostname:453479] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionENS_10ParametersE+0x5a)[0x7fec2e7b36ca] +[i-capture-the-hostname:453479] [15] ./demo_dg-poisson(+0x9b6b)[0x559272182b6b] +[i-capture-the-hostname:453479] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fec2df0ed0a] +[i-capture-the-hostname:453479] [17] ./demo_dg-poisson(+0x9dba)[0x559272182dba] +[i-capture-the-hostname:453479] *** End of error message *** +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9886,16 +9951,35 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 1 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65832] *** Process received signal *** -[ionos1-amd64:65832] Signal: Aborted (6) -[ionos1-amd64:65832] Signal code: (-6) -terminate called after throwing an instance of '[ionos1-amd64:65828] [ 0] std::runtime_error' +[i-capture-the-hostname:453480] *** Process received signal *** +[i-capture-the-hostname:453480] Signal: Aborted (6) +[i-capture-the-hostname:453480] Signal code: (-6) +[i-capture-the-hostname:453480] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f4903003d60] +[i-capture-the-hostname:453480] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f4903003ce1] +[i-capture-the-hostname:453480] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f4902fed537] +[i-capture-the-hostname:453480] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f49033927ec] +[i-capture-the-hostname:453480] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f490339d966] +[i-capture-the-hostname:453480] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f490339d9d1] +[i-capture-the-hostname:453480] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f490339dc65] +[i-capture-the-hostname:453480] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f490377a813] +[i-capture-the-hostname:453480] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f4903aad9fe] +[i-capture-the-hostname:453480] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f4903a919cf] +[i-capture-the-hostname:453480] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f4903a7e0b7] +[i-capture-the-hostname:453480] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f4903a74132] +[i-capture-the-hostname:453480] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f4903843fa9] +[i-capture-the-hostname:453480] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f4903891bb2] +[i-capture-the-hostname:453480] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionENS_10ParametersE+0x5a)[0x7f49038936ca] +[i-capture-the-hostname:453480] [15] ./demo_dg-poisson(+0x9b6b)[0x55598e886b6b] +[i-capture-the-hostname:453480] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f4902feed0a] +[i-capture-the-hostname:453480] [17] ./demo_dg-poisson(+0x9dba)[0x55598e886dba] +[i-capture-the-hostname:453480] *** End of error message *** +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -9911,103 +9995,49 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 1 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f5319e43d60] -[ionos1-amd64:65828] [ 1] [ionos1-amd64:65830] *** Process received signal *** -[ionos1-amd64:65832] [ 0] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f5319e43ce1] -[ionos1-amd64:65828] [ 2] [ionos1-amd64:65830] Signal: Aborted (6) -[ionos1-amd64:65830] Signal code: (-6) -/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f4e44843d60] -[ionos1-amd64:65832] [ 1] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f5319e2d537] -[ionos1-amd64:65828] [ 3] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f4e44843ce1] -[ionos1-amd64:65832] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f4e4482d537] -[ionos1-amd64:65832] [ 3] [ionos1-amd64:65830] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f531a1d27ec] -[ionos1-amd64:65828] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7faa7a773d60] -[ionos1-amd64:65830] [ 1] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f531a1dd966] -[ionos1-amd64:65828] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f4e44bd27ec] -[ionos1-amd64:65832] [ 4] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7faa7a773ce1] -[ionos1-amd64:65830] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f531a1dd9d1] -[ionos1-amd64:65828] [ 6] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7faa7a75d537] -[ionos1-amd64:65830] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f4e44bdd966] -[ionos1-amd64:65832] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f531a1ddc65] -[ionos1-amd64:65828] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7faa7ab027ec] -[ionos1-amd64:65830] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f4e44bdd9d1] -[ionos1-amd64:65832] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f4e44bddc65] -[ionos1-amd64:65832] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7faa7ab0d966] -[ionos1-amd64:65830] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7faa7ab0d9d1] -[ionos1-amd64:65830] [ 6] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f531a5ba813] -[ionos1-amd64:65828] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f4e44fba813] -[ionos1-amd64:65832] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7faa7ab0dc65] -[ionos1-amd64:65830] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f531a8ed9fe] -[ionos1-amd64:65828] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f4e452ed9fe] -[ionos1-amd64:65832] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7faa7aeea813] -[ionos1-amd64:65830] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f531a8d19cf] -[ionos1-amd64:65828] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f4e452d19cf] -[ionos1-amd64:65832] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7faa7b21d9fe] -[ionos1-amd64:65830] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f531a8be0b7] -[ionos1-amd64:65828] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f4e452be0b7] -[ionos1-amd64:65832] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7faa7b2019cf] -[ionos1-amd64:65830] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f531a8b4132] -[ionos1-amd64:65828] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f4e452b4132] -[ionos1-amd64:65832] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7faa7b1ee0b7] -[ionos1-amd64:65830] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f531a683fa9] -[ionos1-amd64:65828] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f4e45083fa9] -[ionos1-amd64:65832] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7faa7b1e4132] -[ionos1-amd64:65830] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f531a6d1bb2] -[ionos1-amd64:65828] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f4e450d1bb2] -[ionos1-amd64:65832] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f531a6d3790] -[ionos1-amd64:65828] [15] ./demo_conditional(+0x6876)[0x557484772876] -[ionos1-amd64:65828] [16] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7faa7afb3fa9] -[ionos1-amd64:65830] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f5319e2ed0a] -[ionos1-amd64:65828] [17] ./demo_conditional(+0x6a5a)[0x557484772a5a] -[ionos1-amd64:65828] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f4e450d3790] -[ionos1-amd64:65832] [15] ./demo_conditional(+0x6876)[0x5600a5ca2876] -[ionos1-amd64:65832] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f4e4482ed0a] -[ionos1-amd64:65832] [17] ./demo_conditional(+0x6a5a)[0x5600a5ca2a5a] -[ionos1-amd64:65832] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7faa7b001bb2] -[ionos1-amd64:65830] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7faa7b003790] -[ionos1-amd64:65830] [15] ./demo_conditional(+0x6876)[0x5605f07d3876] -[ionos1-amd64:65830] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7faa7a75ed0a] -[ionos1-amd64:65830] [17] ./demo_conditional(+0x6a5a)[0x5605f07d3a5a] -[ionos1-amd64:65830] *** End of error message *** +[i-capture-the-hostname:453483] *** Process received signal *** +[i-capture-the-hostname:453483] Signal: Aborted (6) +[i-capture-the-hostname:453483] Signal code: (-6) +[i-capture-the-hostname:453483] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f5dd9d23d60] +[i-capture-the-hostname:453483] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f5dd9d23ce1] +[i-capture-the-hostname:453483] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f5dd9d0d537] +[i-capture-the-hostname:453483] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f5dda0b27ec] +[i-capture-the-hostname:453483] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f5dda0bd966] +[i-capture-the-hostname:453483] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f5dda0bd9d1] +[i-capture-the-hostname:453483] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f5dda0bdc65] +[i-capture-the-hostname:453483] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f5dda49a813] +[i-capture-the-hostname:453483] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f5dda7cd9fe] +[i-capture-the-hostname:453483] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f5dda7b19cf] +[i-capture-the-hostname:453483] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f5dda79e0b7] +[i-capture-the-hostname:453483] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f5dda794132] +[i-capture-the-hostname:453483] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f5dda563fa9] +[i-capture-the-hostname:453483] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f5dda5b1bb2] +[i-capture-the-hostname:453483] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionENS_10ParametersE+0x5a)[0x7f5dda5b36ca] +[i-capture-the-hostname:453483] [15] ./demo_dg-poisson(+0x9b6b)[0x556c67754b6b] +[i-capture-the-hostname:453483] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f5dd9d0ed0a] +[i-capture-the-hostname:453483] [17] ./demo_dg-poisson(+0x9dba)[0x556c67754dba] +[i-capture-the-hostname:453483] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 2 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 60: demo_functional_mpi -27/49 Test #56: demo_eval_mpi .......................... Passed 0.44 sec - Start 62: demo_gmg-poisson_mpi -28/49 Test #58: demo_extrapolation_mpi ................. Passed 0.51 sec - Start 64: demo_lift-drag_mpi -29/49 Test #60: demo_functional_mpi .................... Passed 0.49 sec - Start 66: demo_mesh-quality_mpi -30/49 Test #62: demo_gmg-poisson_mpi ................... Passed 0.59 sec Start 68: demo_meshfunction-refinement_mpi -31/49 Test #64: demo_lift-drag_mpi ..................... Passed 0.58 sec +30/49 Test #62: demo_gmg-poisson_mpi ................... Passed 0.60 sec Start 70: demo_multimesh-poisson_mpi -32/49 Test #66: demo_mesh-quality_mpi .................. Passed 0.59 sec - Start 72: demo_multimesh-stokes_mpi -33/49 Test #68: demo_meshfunction-refinement_mpi ....... Passed 0.50 sec - Start 74: demo_nonmatching-projection_mpi -34/49 Test #70: demo_multimesh-poisson_mpi ............. Passed 0.50 sec - Start 76: demo_parallel-refinement_mpi -35/49 Test #72: demo_multimesh-stokes_mpi .............. Passed 0.49 sec - Start 78: demo_parameters_mpi -36/49 Test #49: demo_dg-advection-diffusion_mpi ........***Failed 2.66 sec +31/49 Test #49: demo_dg-advection-diffusion_mpi ........***Failed 1.69 sec Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. -Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -10030,22 +10060,27 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65888] *** Process received signal *** -[ionos1-amd64:65888] Signal: Aborted (6) -[ionos1-amd64:65888] Signal code: (-6) -[ionos1-amd64:65888] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f7f8815bd60] -[ionos1-amd64:65888] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f7f8815bce1] -[ionos1-amd64:65888] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f7f88145537] -[ionos1-amd64:65888] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f7f884ea7ec] -[ionos1-amd64:65888] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f7f884f5966] -[ionos1-amd64:65888] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f7f884f59d1] -[ionos1-amd64:65888] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f7f884f5c65] -[ionos1-amd64:65888] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f7f888d2813] -[ionos1-amd64:65888] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f7f88c059fe] -[ionos1-amd64:65888] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f7f88be99cf] -[ionos1-amd64:65888] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f7f88bd60b7] -[ionos1-amd64:65888] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f7f88bcc132] -[ionos1-amd64:65888] [12] terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453481] *** Process received signal *** +[i-capture-the-hostname:453481] Signal: Aborted (6) +[i-capture-the-hostname:453481] Signal code: (-6) +[i-capture-the-hostname:453481] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fc603d4bd60] +[i-capture-the-hostname:453481] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fc603d4bce1] +[i-capture-the-hostname:453481] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fc603d35537] +[i-capture-the-hostname:453481] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fc6040da7ec] +[i-capture-the-hostname:453481] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fc6040e5966] +[i-capture-the-hostname:453481] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fc6040e59d1] +[i-capture-the-hostname:453481] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fc6040e5c65] +[i-capture-the-hostname:453481] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fc6044c2813] +[i-capture-the-hostname:453481] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fc6047f59fe] +[i-capture-the-hostname:453481] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fc6047d99cf] +[i-capture-the-hostname:453481] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fc6047c60b7] +[i-capture-the-hostname:453481] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fc6047bc132] +[i-capture-the-hostname:453481] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS3_NSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESC_+0x170)[0x7fc6047ec7a0] +[i-capture-the-hostname:453481] [13] ./demo_dg-advection-diffusion(+0x13251)[0x5589ec3b3251] +[i-capture-the-hostname:453481] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fc603d36d0a] +[i-capture-the-hostname:453481] [15] ./demo_dg-advection-diffusion(+0x137ca)[0x5589ec3b37ca] +[i-capture-the-hostname:453481] *** End of error message *** +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -10067,23 +10102,27 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65890] *** Process received signal *** -[ionos1-amd64:65890] Signal: Aborted (6) -[ionos1-amd64:65890] Signal code: (-6) -[ionos1-amd64:65890] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f245aaebd60] -[ionos1-amd64:65890] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f245aaebce1] -[ionos1-amd64:65890] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f245aad5537] -[ionos1-amd64:65890] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f245ae7a7ec] -[ionos1-amd64:65890] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f245ae85966] -[ionos1-amd64:65890] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f245ae859d1] -[ionos1-amd64:65890] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f245ae85c65] -[ionos1-amd64:65890] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f245b262813] -[ionos1-amd64:65890] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f245b5959fe] -[ionos1-amd64:65890] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f245b5799cf] -[ionos1-amd64:65890] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f245b5660b7] -[ionos1-amd64:65890] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f245b55c132] -[ionos1-amd64:65890] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS3_NSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESC_+0x170)[0x7f245b58c7a0] -[ionos1-amd64:65890] terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453484] *** Process received signal *** +[i-capture-the-hostname:453484] Signal: Aborted (6) +[i-capture-the-hostname:453484] Signal code: (-6) +[i-capture-the-hostname:453484] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fe48543bd60] +[i-capture-the-hostname:453484] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fe48543bce1] +[i-capture-the-hostname:453484] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fe485425537] +[i-capture-the-hostname:453484] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fe4857ca7ec] +[i-capture-the-hostname:453484] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fe4857d5966] +[i-capture-the-hostname:453484] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fe4857d59d1] +[i-capture-the-hostname:453484] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fe4857d5c65] +[i-capture-the-hostname:453484] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fe485bb2813] +[i-capture-the-hostname:453484] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fe485ee59fe] +[i-capture-the-hostname:453484] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fe485ec99cf] +[i-capture-the-hostname:453484] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fe485eb60b7] +[i-capture-the-hostname:453484] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fe485eac132] +[i-capture-the-hostname:453484] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS3_NSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESC_+0x170)[0x7fe485edc7a0] +[i-capture-the-hostname:453484] [13] ./demo_dg-advection-diffusion(+0x13251)[0x55c1efe10251] +[i-capture-the-hostname:453484] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fe485426d0a] +[i-capture-the-hostname:453484] [15] ./demo_dg-advection-diffusion(+0x137ca)[0x55c1efe107ca] +[i-capture-the-hostname:453484] *** End of error message *** +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -10105,57 +10144,55 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:65889] *** Process received signal *** -[ionos1-amd64:65889] Signal: Aborted (6) -[ionos1-amd64:65889] Signal code: (-6) -[ionos1-amd64:65889] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7ff4d3d13d60] -[ionos1-amd64:65889] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7ff4d3d13ce1] -[ionos1-amd64:65889] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7ff4d3cfd537] -[ionos1-amd64:65889] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7ff4d40a27ec] -[ionos1-amd64:65889] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7ff4d40ad966] -[ionos1-amd64:65889] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7ff4d40ad9d1] -[ionos1-amd64:65889] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7ff4d40adc65] -[ionos1-amd64:65889] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7ff4d448a813] -[ionos1-amd64:65889] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7ff4d47bd9fe] -[ionos1-amd64:65889] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7ff4d47a19cf] -[ionos1-amd64:65889] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7ff4d478e0b7] -[ionos1-amd64:65889] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7ff4d4784132] -[ionos1-amd64:65889] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS3_NSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESC_+0x170)[0x7ff4d47b47a0] -[ionos1-amd64:65889] [13] ./demo_dg-advection-diffusion(+0x13251)[0x556ea90ab251] -[ionos1-amd64:65889] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7ff4d3cfed0a] -[ionos1-amd64:65889] [15] ./demo_dg-advection-diffusion(+0x137ca)[0x556ea90ab7ca] -[ionos1-amd64:65889] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS3_NSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESC_+0x170)[0x7f7f88bfc7a0] -[ionos1-amd64:65888] [13] ./demo_dg-advection-diffusion(+0x13251)[0x5559a450e251] -[ionos1-amd64:65888] [14] [13] ./demo_dg-advection-diffusion(+0x13251)[0x55f0ce37f251] -[ionos1-amd64:65890] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f7f88146d0a] -[ionos1-amd64:65888] [15] ./demo_dg-advection-diffusion(+0x137ca)[0x5559a450e7ca] -[ionos1-amd64:65888] *** End of error message *** -/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f245aad6d0a] -[ionos1-amd64:65890] [15] ./demo_dg-advection-diffusion(+0x137ca)[0x55f0ce37f7ca] -[ionos1-amd64:65890] *** End of error message *** +[i-capture-the-hostname:453482] *** Process received signal *** +[i-capture-the-hostname:453482] Signal: Aborted (6) +[i-capture-the-hostname:453482] Signal code: (-6) +[i-capture-the-hostname:453482] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f021c3e3d60] +[i-capture-the-hostname:453482] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f021c3e3ce1] +[i-capture-the-hostname:453482] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f021c3cd537] +[i-capture-the-hostname:453482] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f021c7727ec] +[i-capture-the-hostname:453482] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f021c77d966] +[i-capture-the-hostname:453482] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f021c77d9d1] +[i-capture-the-hostname:453482] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f021c77dc65] +[i-capture-the-hostname:453482] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f021cb5a813] +[i-capture-the-hostname:453482] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f021ce8d9fe] +[i-capture-the-hostname:453482] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f021ce719cf] +[i-capture-the-hostname:453482] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f021ce5e0b7] +[i-capture-the-hostname:453482] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f021ce54132] +[i-capture-the-hostname:453482] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS3_NSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESC_+0x170)[0x7f021ce847a0] +[i-capture-the-hostname:453482] [13] ./demo_dg-advection-diffusion(+0x13251)[0x55cddcd75251] +[i-capture-the-hostname:453482] [14] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f021c3ced0a] +[i-capture-the-hostname:453482] [15] ./demo_dg-advection-diffusion(+0x137ca)[0x55cddcd757ca] +[i-capture-the-hostname:453482] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 1 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- + Start 72: demo_multimesh-stokes_mpi +32/49 Test #64: demo_lift-drag_mpi ..................... Passed 0.55 sec + Start 74: demo_nonmatching-projection_mpi +33/49 Test #66: demo_mesh-quality_mpi .................. Passed 0.62 sec + Start 76: demo_parallel-refinement_mpi +34/49 Test #68: demo_meshfunction-refinement_mpi ....... Passed 0.53 sec + Start 78: demo_parameters_mpi +35/49 Test #70: demo_multimesh-poisson_mpi ............. Passed 0.57 sec Start 80: demo_poisson1D_mpi -37/49 Test #74: demo_nonmatching-projection_mpi ........ Passed 0.51 sec +36/49 Test #72: demo_multimesh-stokes_mpi .............. Passed 0.54 sec Start 82: demo_poisson1D-in-2D_mpi -38/49 Test #76: demo_parallel-refinement_mpi ........... Passed 0.56 sec +37/49 Test #74: demo_nonmatching-projection_mpi ........ Passed 0.54 sec Start 84: demo_poisson-disc_mpi -39/49 Test #78: demo_parameters_mpi .................... Passed 0.56 sec +38/49 Test #78: demo_parameters_mpi .................... Passed 0.52 sec Start 86: demo_refinement_mpi -40/49 Test #80: demo_poisson1D_mpi .....................***Failed 0.54 sec +39/49 Test #76: demo_parallel-refinement_mpi ........... Passed 0.59 sec + Start 88: demo_spatial-coordinates_mpi +40/49 Test #80: demo_poisson1D_mpi .....................***Failed 0.53 sec Process 0: Solving linear variational problem. Process 1: Solving linear variational problem. Process 2: Solving linear variational problem. - Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. - Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -10172,19 +10209,35 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 2 +*** Process: 0 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:66134] *** Process received signal *** -[ionos1-amd64:66134] Signal: Aborted (6) -[ionos1-amd64:66134] Signal code: (-6) -[ionos1-amd64:66134] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f5f54aa3d60] -[ionos1-amd64:66134] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f5f54aa3ce1] -[ionos1-amd64:66134] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f5f54a8d537] -[ionos1-amd64:66134] [ 3] terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453721] *** Process received signal *** +[i-capture-the-hostname:453721] Signal: Aborted (6) +[i-capture-the-hostname:453721] Signal code: (-6) +[i-capture-the-hostname:453721] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fa5d7d33d60] +[i-capture-the-hostname:453721] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fa5d7d33ce1] +[i-capture-the-hostname:453721] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fa5d7d1d537] +[i-capture-the-hostname:453721] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fa5d80c27ec] +[i-capture-the-hostname:453721] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fa5d80cd966] +[i-capture-the-hostname:453721] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fa5d80cd9d1] +[i-capture-the-hostname:453721] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fa5d80cdc65] +[i-capture-the-hostname:453721] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fa5d84aa813] +[i-capture-the-hostname:453721] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fa5d87dd9fe] +[i-capture-the-hostname:453721] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fa5d87c19cf] +[i-capture-the-hostname:453721] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fa5d87ae0b7] +[i-capture-the-hostname:453721] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fa5d87a4132] +[i-capture-the-hostname:453721] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fa5d8573fa9] +[i-capture-the-hostname:453721] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fa5d85c1bb2] +[i-capture-the-hostname:453721] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fa5d85c3790] +[i-capture-the-hostname:453721] [15] ./demo_poisson1D(+0x7a67)[0x55cd1f123a67] +[i-capture-the-hostname:453721] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fa5d7d1ed0a] +[i-capture-the-hostname:453721] [17] ./demo_poisson1D(+0x7c8a)[0x55cd1f123c8a] +[i-capture-the-hostname:453721] *** End of error message *** +terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -10206,45 +10259,17 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f5f54e327ec] -[ionos1-amd64:66134] [ 4] [ionos1-amd64:66132] *** Process received signal *** -[ionos1-amd64:66132] Signal: Aborted (6) -[ionos1-amd64:66132] Signal code: (-6) -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f5f54e3d966] -[ionos1-amd64:66134] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f5f54e3d9d1] -[ionos1-amd64:66134] [ 6] [ionos1-amd64:66132] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f5f54e3dc65] -[ionos1-amd64:66134] [ 7] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f881c1cbd60] -[ionos1-amd64:66132] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f881c1cbce1] -[ionos1-amd64:66132] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f881c1b5537] -[ionos1-amd64:66132] [ 3] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f5f5521a813] -[ionos1-amd64:66134] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f881c55a7ec] -[ionos1-amd64:66132] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f881c565966] -[ionos1-amd64:66132] [ 5] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f5f5554d9fe] -[ionos1-amd64:66134] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f881c5659d1] -[ionos1-amd64:66132] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f881c565c65] -[ionos1-amd64:66132] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f5f555319cf] -[ionos1-amd64:66134] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f881c942813] -[ionos1-amd64:66132] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f5f5551e0b7] -[ionos1-amd64:66134] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f881cc759fe] -[ionos1-amd64:66132] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f5f55514132] -[ionos1-amd64:66134] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f881cc599cf] -[ionos1-amd64:66132] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f5f552e3fa9] -[ionos1-amd64:66134] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f881cc460b7] -[ionos1-amd64:66132] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f5f55331bb2] -[ionos1-amd64:66134] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f881cc3c132] -[ionos1-amd64:66132] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f5f55333790] -[ionos1-amd64:66134] [15] ./demo_poisson1D(+0x7a67)[0x5639e9239a67] -[ionos1-amd64:66134] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f5f54a8ed0a] -[ionos1-amd64:66134] [17] ./demo_poisson1D(+0x7c8a)[0x5639e9239c8a] -[ionos1-amd64:66134] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f881ca0bfa9] -[ionos1-amd64:66132] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f881ca59bb2] -[ionos1-amd64:66132] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f881ca5b790] -[ionos1-amd64:66132] [15] ./demo_poisson1D(+0x7a67)[0x55b0edc36a67] -[ionos1-amd64:66132] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f881c1b6d0a] -[ionos1-amd64:66132] [17] ./demo_poisson1D(+0x7c8a)[0x55b0edc36c8a] -[ionos1-amd64:66132] *** End of error message *** -terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453722] *** Process received signal *** +[i-capture-the-hostname:453722] Signal: Aborted (6) +[i-capture-the-hostname:453722] Signal code: (-6) +[i-capture-the-hostname:453722] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f2ec27bbd60] +[i-capture-the-hostname:453722] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f2ec27bbce1] +[i-capture-the-hostname:453722] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f2ec27a5537] +[i-capture-the-hostname:453722] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f2ec2b4a7ec] +[i-capture-the-hostname:453722] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f2ec2b55966] +[i-capture-the-hostname:453722] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f2ec2b559d1] +[i-capture-the-hostname:453722] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f2ec2b55c65] +[i-capture-the-hostname:453722] [ 7] terminate called after throwing an instance of 'std::runtime_error' what(): *** ------------------------------------------------------------------------- @@ -10260,61 +10285,75 @@ *** Error: Unable to successfully call PETSc function 'KSPSolve'. *** Reason: PETSc error code is: 92 (See https://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers). *** Where: This error was encountered inside /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/PETScKrylovSolver.cpp. -*** Process: 0 +*** Process: 2 *** *** DOLFIN version: 2019.2.0.dev0 *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:66130] *** Process received signal *** -[ionos1-amd64:66130] Signal: Aborted (6) -[ionos1-amd64:66130] Signal code: (-6) -[ionos1-amd64:66130] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7faddca8bd60] -[ionos1-amd64:66130] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7faddca8bce1] -[ionos1-amd64:66130] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7faddca75537] -[ionos1-amd64:66130] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7faddce1a7ec] -[ionos1-amd64:66130] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7faddce25966] -[ionos1-amd64:66130] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7faddce259d1] -[ionos1-amd64:66130] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7faddce25c65] -[ionos1-amd64:66130] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7faddd202813] -[ionos1-amd64:66130] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7faddd5359fe] -[ionos1-amd64:66130] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7faddd5199cf] -[ionos1-amd64:66130] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7faddd5060b7] -[ionos1-amd64:66130] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7faddd4fc132] -[ionos1-amd64:66130] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7faddd2cbfa9] -[ionos1-amd64:66130] [13] -------------------------------------------------------------------------- +[i-capture-the-hostname:453723] *** Process received signal *** +[i-capture-the-hostname:453723] Signal: Aborted (6) +[i-capture-the-hostname:453723] Signal code: (-6) +[i-capture-the-hostname:453723] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fe6522bbd60] +[i-capture-the-hostname:453723] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fe6522bbce1] +[i-capture-the-hostname:453723] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fe6522a5537] +[i-capture-the-hostname:453723] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fe65264a7ec] +[i-capture-the-hostname:453723] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fe652655966] +[i-capture-the-hostname:453723] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fe6526559d1] +[i-capture-the-hostname:453723] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fe652655c65] +[i-capture-the-hostname:453723] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fe652a32813] +[i-capture-the-hostname:453723] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fe652d659fe] +[i-capture-the-hostname:453723] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fe652d499cf] +[i-capture-the-hostname:453723] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fe652d360b7] +[i-capture-the-hostname:453723] [11] Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. + Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f2ec2f32813] +[i-capture-the-hostname:453722] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f2ec32659fe] +[i-capture-the-hostname:453722] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f2ec32499cf] +[i-capture-the-hostname:453722] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f2ec32360b7] +[i-capture-the-hostname:453722] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f2ec322c132] +[i-capture-the-hostname:453722] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7f2ec2ffbfa9] +[i-capture-the-hostname:453722] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fe652d2c132] +[i-capture-the-hostname:453723] [12] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin23LinearVariationalSolver5solveEv+0xe69)[0x7fe652afbfa9] +[i-capture-the-hostname:453723] [13] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7fe652b49bb2] +[i-capture-the-hostname:453723] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7fe652b4b790] +[i-capture-the-hostname:453723] [15] ./demo_poisson1D(+0x7a67)[0x5644bb15aa67] +[i-capture-the-hostname:453723] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fe6522a6d0a] +[i-capture-the-hostname:453723] [17] ./demo_poisson1D(+0x7c8a)[0x5644bb15ac8a] +[i-capture-the-hostname:453723] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7f2ec3049bb2] +[i-capture-the-hostname:453722] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7f2ec304b790] +[i-capture-the-hostname:453722] [15] ./demo_poisson1D(+0x7a67)[0x55af36e08a67] +[i-capture-the-hostname:453722] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f2ec27a6d0a] +[i-capture-the-hostname:453722] [17] ./demo_poisson1D(+0x7c8a)[0x55af36e08c8a] +[i-capture-the-hostname:453722] *** End of error message *** +-------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionESt6vectorIPKNS_11DirichletBCESaIS8_EENS_10ParametersE+0x522)[0x7faddd319bb2] -[ionos1-amd64:66130] [14] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin5solveERKNS_8EquationERNS_8FunctionERKNS_11DirichletBCENS_10ParametersE+0x80)[0x7faddd31b790] -[ionos1-amd64:66130] [15] ./demo_poisson1D(+0x7a67)[0x560a4f2c6a67] -[ionos1-amd64:66130] [16] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7faddca76d0a] -[ionos1-amd64:66130] [17] ./demo_poisson1D(+0x7c8a)[0x560a4f2c6c8a] -[ionos1-amd64:66130] *** End of error message *** -------------------------------------------------------------------------- -mpirun noticed that process rank 1 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 2 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- - Start 88: demo_spatial-coordinates_mpi -41/49 Test #82: demo_poisson1D-in-2D_mpi ............... Passed 0.55 sec Start 90: demo_submesh_mpi -42/49 Test #84: demo_poisson-disc_mpi .................. Passed 0.51 sec +41/49 Test #84: demo_poisson-disc_mpi .................. Passed 0.52 sec Start 92: demo_sym-dirichlet-bc_mpi -43/49 Test #86: demo_refinement_mpi .................... Passed 0.63 sec +42/49 Test #82: demo_poisson1D-in-2D_mpi ............... Passed 0.57 sec Start 94: demo_time-series_mpi -44/49 Test #90: demo_submesh_mpi ....................... Passed 0.51 sec +43/49 Test #86: demo_refinement_mpi .................... Passed 0.61 sec Start 96: demo_waveguide_mpi -45/49 Test #88: demo_spatial-coordinates_mpi ........... Passed 0.59 sec -46/49 Test #53: demo_elasticity_mpi .................... Passed 3.62 sec -47/49 Test #94: demo_time-series_mpi ................... Passed 0.51 sec -48/49 Test #96: demo_waveguide_mpi ..................... Passed 0.75 sec -49/49 Test #92: demo_sym-dirichlet-bc_mpi ..............***Failed 1.26 sec -Process 2: +44/49 Test #90: demo_submesh_mpi ....................... Passed 0.53 sec +45/49 Test #88: demo_spatial-coordinates_mpi ........... Passed 0.64 sec +46/49 Test #94: demo_time-series_mpi ................... Passed 0.55 sec +47/49 Test #53: demo_elasticity_mpi .................... Passed 3.47 sec +48/49 Test #96: demo_waveguide_mpi ..................... Passed 0.73 sec +49/49 Test #92: demo_sym-dirichlet-bc_mpi ..............***Failed 1.33 sec Process 0:
Process 1:
-Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 2:
Process 2: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. +Process 1: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. Process 0: *** Warning: Using PETSc native LU solver. Consider specifying a more efficient LU solver (e.g.umfpack) if available. terminate called after throwing an instance of 'std::runtime_error' what(): @@ -10338,8 +10377,11 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- +[i-capture-the-hostname:453838] *** Process received signal *** +[i-capture-the-hostname:453838] Signal: Aborted (6) +[i-capture-the-hostname:453838] Signal code: (-6) terminate called after throwing an instance of 'std::runtime_error' - what(): +[i-capture-the-hostname:453838] [ 0] what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -10360,22 +10402,15 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -[ionos1-amd64:66226] *** Process received signal *** -[ionos1-amd64:66226] Signal: Aborted (6) -[ionos1-amd64:66226] Signal code: (-6) -[ionos1-amd64:66225] *** Process received signal *** -[ionos1-amd64:66225] Signal: Aborted (6) -[ionos1-amd64:66225] Signal code: (-6) -[ionos1-amd64:66226] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7fa0016abd60] -[ionos1-amd64:66226] [ 1] [ionos1-amd64:66225] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f0e88bfbd60] -[ionos1-amd64:66225] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fa0016abce1] -[ionos1-amd64:66226] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f0e88bfbce1] -[ionos1-amd64:66225] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fa001695537] -[ionos1-amd64:66226] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f0e88be5537] -[ionos1-amd64:66225] [ 3] terminate called after throwing an instance of 'std::runtime_error' -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7fa001a3a7ec] -[ionos1-amd64:66226] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f0e88f8a7ec] -[ionos1-amd64:66225] [ 4] what(): +/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f949ea1bd60] +[i-capture-the-hostname:453838] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f949ea1bce1] +[i-capture-the-hostname:453838] [ 2] [i-capture-the-hostname:453836] *** Process received signal *** +[i-capture-the-hostname:453836] Signal: Aborted (6) +[i-capture-the-hostname:453836] Signal code: (-6) +/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f949ea05537] +[i-capture-the-hostname:453838] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f949edaa7ec] +[i-capture-the-hostname:453838] [ 4] terminate called after throwing an instance of 'std::runtime_error' +[i-capture-the-hostname:453836] [ 0] what(): *** ------------------------------------------------------------------------- *** DOLFIN encountered an error. If you are not able to resolve this issue @@ -10396,61 +10431,65 @@ *** Git changeset: unknown *** ------------------------------------------------------------------------- -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f0e88f95966] -[ionos1-amd64:66225] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f0e88f959d1] -[ionos1-amd64:66225] [ 6] [ionos1-amd64:66223] *** Process received signal *** -[ionos1-amd64:66223] Signal: Aborted (6) -[ionos1-amd64:66223] Signal code: (-6) -/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7fa001a45966] -[ionos1-amd64:66226] [ 5] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7fa001a459d1] -[ionos1-amd64:66226] [ 6] [ionos1-amd64:66223] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f0e88f95c65] -[ionos1-amd64:66225] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7fa001a45c65] -[ionos1-amd64:66226] [ 7] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f473008bd60] -[ionos1-amd64:66223] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f473008bce1] -[ionos1-amd64:66223] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f4730075537] -[ionos1-amd64:66223] [ 3] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f0e89372813] -[ionos1-amd64:66225] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7fa001e22813] -[ionos1-amd64:66226] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f473041a7ec] -[ionos1-amd64:66223] [ 4] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f0e896a59fe] -[ionos1-amd64:66225] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f4730425966] -[ionos1-amd64:66223] [ 5] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7fa0021559fe] -[ionos1-amd64:66226] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f47304259d1] -[ionos1-amd64:66223] [ 6] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f4730425c65] -[ionos1-amd64:66223] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7fa0021399cf] -[ionos1-amd64:66226] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f0e896899cf] -[ionos1-amd64:66225] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f4730802813] -[ionos1-amd64:66223] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f0e896760b7] -[ionos1-amd64:66225] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7fa0021260b7] -[ionos1-amd64:66226] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f4730b359fe] -[ionos1-amd64:66223] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f0e8966c132] -[ionos1-amd64:66225] [12] ./demo_sym-dirichlet-bc(+0xf2ed)[0x55f28e3de2ed] -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7fa00211c132] -[ionos1-amd64:66226] [12] ./demo_sym-dirichlet-bc(+0xf2ed)[0x55658e2e62ed] -[ionos1-amd64:66226] [13] [ionos1-amd64:66225] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7fa001696d0a] -[ionos1-amd64:66226] [14] ./demo_sym-dirichlet-bc(+0xf60a)[0x55658e2e660a] -[ionos1-amd64:66226] *** End of error message *** -/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f0e88be6d0a] -[ionos1-amd64:66225] [14] ./demo_sym-dirichlet-bc(+0xf60a)[0x55f28e3de60a] -[ionos1-amd64:66225] *** End of error message *** -/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f4730b199cf] -[ionos1-amd64:66223] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f4730b060b7] -[ionos1-amd64:66223] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f4730afc132] -[ionos1-amd64:66223] [12] ./demo_sym-dirichlet-bc(+0xf2ed)[0x55ff612262ed] -[ionos1-amd64:66223] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f4730076d0a] -[ionos1-amd64:66223] [14] ./demo_sym-dirichlet-bc(+0xf60a)[0x55ff6122660a] -[ionos1-amd64:66223] *** End of error message *** +/lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f1e57c63d60] +[i-capture-the-hostname:453836] [ 1] [i-capture-the-hostname:453834] *** Process received signal *** +/usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f949edb5966] +[i-capture-the-hostname:453838] [ 5] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f1e57c63ce1] +[i-capture-the-hostname:453836] [ 2] [i-capture-the-hostname:453834] Signal: Aborted (6) +[i-capture-the-hostname:453834] Signal code: (-6) +/lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f1e57c4d537] +[i-capture-the-hostname:453836] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f949edb59d1] +[i-capture-the-hostname:453838] [ 6] [i-capture-the-hostname:453834] [ 0] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f949edb5c65] +[i-capture-the-hostname:453838] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f1e57ff27ec] +[i-capture-the-hostname:453836] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x3bd60)[0x7f77aaf03d60] +[i-capture-the-hostname:453834] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7f77aaf03ce1] +[i-capture-the-hostname:453834] [ 2] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f1e57ffd966] +[i-capture-the-hostname:453836] [ 5] /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7f77aaeed537] +[i-capture-the-hostname:453834] [ 3] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f1e57ffd9d1] +[i-capture-the-hostname:453836] [ 6] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f949f192813] +[i-capture-the-hostname:453838] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9a7ec)[0x7f77ab2927ec] +[i-capture-the-hostname:453834] [ 4] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f1e57ffdc65] +[i-capture-the-hostname:453836] [ 7] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5966)[0x7f77ab29d966] +[i-capture-the-hostname:453834] [ 5] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f949f4c59fe] +[i-capture-the-hostname:453838] [ 9] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa59d1)[0x7f77ab29d9d1] +[i-capture-the-hostname:453834] [ 6] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f1e583da813] +[i-capture-the-hostname:453836] [ 8] /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5c65)[0x7f77ab29dc65] +[i-capture-the-hostname:453834] [ 7] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f949f4a99cf] +[i-capture-the-hostname:453838] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(+0x172813)[0x7f77ab67a813] +[i-capture-the-hostname:453834] [ 8] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f1e5870d9fe] +[i-capture-the-hostname:453836] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f949f4960b7] +[i-capture-the-hostname:453838] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f1e586f19cf] +[i-capture-the-hostname:453836] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin12dolfin_errorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_z+0x1ae)[0x7f77ab9ad9fe] +[i-capture-the-hostname:453834] [ 9] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f949f48c132] +[i-capture-the-hostname:453838] [12] ./demo_sym-dirichlet-bc(+0xf2ed)[0x563ace5282ed] +[i-capture-the-hostname:453838] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f949ea06d0a] +[i-capture-the-hostname:453838] [14] ./demo_sym-dirichlet-bc(+0xf60a)[0x563ace52860a] +[i-capture-the-hostname:453838] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin11PETScObject11petsc_errorEiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_+0x42f)[0x7f77ab9919cf] +[i-capture-the-hostname:453834] [10] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f1e586de0b7] +[i-capture-the-hostname:453836] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin17PETScKrylovSolver5solveERNS_11PETScVectorERKS1_b+0x1b37)[0x7f77ab97e0b7] +[i-capture-the-hostname:453834] [11] /build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f1e586d4132] +[i-capture-the-hostname:453836] [12] ./demo_sym-dirichlet-bc(+0xf2ed)[0x563b888f02ed] +[i-capture-the-hostname:453836] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f1e57c4ed0a] +[i-capture-the-hostname:453836] [14] ./demo_sym-dirichlet-bc(+0xf60a)[0x563b888f060a] +[i-capture-the-hostname:453836] *** End of error message *** +/build/dolfin-2019.2.0~git20201207.b495043//obj-x86_64-linux-gnu-64/dolfin/libdolfin64.so.2019.2(_ZN6dolfin8LUSolver5solveERKNS_21GenericLinearOperatorERNS_13GenericVectorERKS4_+0xa2)[0x7f77ab974132] +[i-capture-the-hostname:453834] [12] ./demo_sym-dirichlet-bc(+0xf2ed)[0x5632855bc2ed] +[i-capture-the-hostname:453834] [13] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xea)[0x7f77aaeeed0a] +[i-capture-the-hostname:453834] [14] ./demo_sym-dirichlet-bc(+0xf60a)[0x5632855bc60a] +[i-capture-the-hostname:453834] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- -mpirun noticed that process rank 2 with PID 0 on node ionos1-amd64 exited on signal 6 (Aborted). +mpirun noticed that process rank 1 with PID 0 on node i-capture-the-hostname exited on signal 6 (Aborted). -------------------------------------------------------------------------- 65% tests passed, 17 tests failed out of 49 -Total Test time (real) = 9.09 sec +Total Test time (real) = 8.04 sec The following tests FAILED: 4 - demo_bcs_mpi (Failed) @@ -10482,7 +10521,7 @@ make[1]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043' py3versions: no X-Python3-Version in control file, using supported versions dh_auto_install -a --builddir=obj-x86_64-linux-gnu --destdir=debian/tmp - cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/dolfin-2019.2.0\~git20201207.b495043/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/dolfin-2019.2.0\~git20201207.b495043/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' /usr/bin/cmake -S"/build/dolfin-2019.2.0~git20201207.b495043" -B"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -11216,7 +11255,7 @@ ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' dh_auto_install -a --builddir=obj-x86_64-linux-gnu-64 --destdir=debian/tmp64 - cd obj-x86_64-linux-gnu-64 && make -j15 install DESTDIR=/build/dolfin-2019.2.0\~git20201207.b495043/debian/tmp64 AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-64 && make -j16 install DESTDIR=/build/dolfin-2019.2.0\~git20201207.b495043/debian/tmp64 AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64' /usr/bin/cmake -S"/build/dolfin-2019.2.0~git20201207.b495043" -B"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu-64" --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -12109,28 +12148,28 @@ [ 4%] Building CXX object CMakeFiles/cpp.dir/src/dolfin.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/dolfin.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/dolfin.cpp" [ 9%] Building CXX object CMakeFiles/cpp.dir/src/parameter.cpp.o -[ 14%] Building CXX object CMakeFiles/cpp.dir/src/ale.cpp.o -[ 19%] Building CXX object CMakeFiles/cpp.dir/src/adaptivity.cpp.o +[ 14%] Building CXX object CMakeFiles/cpp.dir/src/adaptivity.cpp.o +[ 19%] Building CXX object CMakeFiles/cpp.dir/src/ale.cpp.o +[ 23%] Building CXX object CMakeFiles/cpp.dir/src/common.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.14/x86_64-linux-gnu-real/include -g -O2 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-DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/generation.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/generation.cpp" /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/geometry.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/geometry.cpp" [ 47%] Building CXX object CMakeFiles/cpp.dir/src/graph.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/graph.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/graph.cpp" [ 52%] Building CXX object CMakeFiles/cpp.dir/src/log.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/log.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/log.cpp" [ 57%] Building CXX object CMakeFiles/cpp.dir/src/math.cpp.o -/usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/math.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/math.cpp" [ 61%] Building CXX object CMakeFiles/cpp.dir/src/mesh.cpp.o +/usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/math.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/math.cpp" /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK 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"/build/dolfin-2019.2.0~git20201207.b495043/python/src/mesh.cpp" [ 66%] Building CXX object CMakeFiles/cpp.dir/src/multistage.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2019.2.0.dev0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -I/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.9 -isystem /usr/lib/python3/dist-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc64-3.14/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/dolfin-2019.2.0~git20201207.b495043=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -isystem /build/dolfin-2019.2.0~git20201207.b495043/debian/tmp64/usr/include -DVERSION_INFO=\"2019.2.0.dev0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -o CMakeFiles/cpp.dir/src/multistage.cpp.o -c "/build/dolfin-2019.2.0~git20201207.b495043/python/src/multistage.cpp" @@ -12646,7 +12685,7 @@ make[1]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043' py3versions: no X-Python3-Version in control file, using supported versions dh_auto_install -i --builddir=obj-x86_64-linux-gnu - cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/dolfin-2019.2.0\~git20201207.b495043/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/dolfin-2019.2.0\~git20201207.b495043/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu' /usr/bin/cmake -S"/build/dolfin-2019.2.0~git20201207.b495043" -B"/build/dolfin-2019.2.0~git20201207.b495043/obj-x86_64-linux-gnu" --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -14466,7 +14505,7 @@ /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/SLEPcEigenSolver.h:138: warning: Found unknown command '\lambda' /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/SLEPcEigenSolver.h:150: warning: Found unknown command '\lambda' /build/dolfin-2019.2.0~git20201207.b495043/dolfin/la/SLEPcEigenSolver.h:153: warning: Found unknown command '\lambda' -sh: 1: latex: not found +sh: line 1: latex: command not found error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log! cpp... Reading /build/dolfin-2019.2.0~git20201207.b495043/dolfin/refinement/ParallelRefinement.h... @@ -15773,7 +15812,7 @@ writing tag file... Running plantuml with JAVA... Running dot... -Generating dot graphs using 16 parallel threads... +Generating dot graphs using 17 parallel threads... Running dot for graph 1/681 Running dot for graph 2/681 Running dot for graph 3/681 @@ -17073,12 +17112,12 @@ make[1]: Entering directory '/build/dolfin-2019.2.0~git20201207.b495043' py3versions: no X-Python3-Version in control file, using supported versions dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info -dpkg-shlibdeps: warning: debian/python3-dolfin-real/usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfin/cpp.cpython-39-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NotImplementedStruct: it's probably a plugin +dpkg-shlibdeps: warning: debian/python3-dolfin-real/usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfin/cpp.cpython-39-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_WarnEx: it's probably a plugin dpkg-shlibdeps: warning: 148 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: debian/python3-dolfin64-real/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfin/cpp.cpython-39-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyType_Ready: it's probably a plugin +dpkg-shlibdeps: warning: debian/python3-dolfin64-real/usr/lib/petscdir/petsc64-3.14/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfin/cpp.cpython-39-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetAttrString: it's probably a plugin dpkg-shlibdeps: warning: 148 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: symbol pthread_create used by debian/libdolfin64-2019.2/usr/lib/x86_64-linux-gnu/libdolfin64.so.2019.2.0.dev0 found in none of the libraries dpkg-shlibdeps: warning: symbol pthread_create used by debian/libdolfin2019.2/usr/lib/x86_64-linux-gnu/libdolfin.so.2019.2.0.dev0 found in none of the libraries +dpkg-shlibdeps: warning: symbol pthread_create used by debian/libdolfin64-2019.2/usr/lib/x86_64-linux-gnu/libdolfin64.so.2019.2.0.dev0 found in none of the libraries make[1]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043' dh_installdeb -O--buildsystem=cmake debian/rules override_dh_gencontrol @@ -17091,31 +17130,31 @@ -Vfenics:Upstream-Version=2019.2 -Vfenics:Next-Upstream-Version=2019.3~ \ -Vpybind11:Upstream-Version=2.6 -Vpybind11:Next-Upstream-Version=3 dpkg-gencontrol: warning: Depends field of package python3-dolfin: substitution variable ${shlibs:Depends} used, but is not defined +dpkg-gencontrol: warning: package libdolfin64-2019.2: substitution variable ${python3:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfin64-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfin-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfin2019.2: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfin64-dev: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfin64-2019.2: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python3-dolfin-real: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-dolfin-real: substitution variable ${python3:Versions} unused, but is defined +dpkg-gencontrol: warning: package libdolfin64-2019.2: substitution variable ${python3:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfin2019.2: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python3-dolfin64-real: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-dolfin64-real: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package libdolfin-dev-common: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfin2019.2: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfin64-2019.2: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfin-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfin-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined make[1]: Leaving directory '/build/dolfin-2019.2.0~git20201207.b495043' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake -dpkg-deb: building package 'libdolfin-dev' in '../libdolfin-dev_2019.2.0~git20201207.b495043-5_amd64.deb'. +dpkg-deb: building package 'dolfin-doc' in '../dolfin-doc_2019.2.0~git20201207.b495043-5_all.deb'. +dpkg-deb: building package 'libdolfin64-2019.2' in '../libdolfin64-2019.2_2019.2.0~git20201207.b495043-5_amd64.deb'. +dpkg-deb: building package 'libdolfin64-2019.2-dbgsym' in '../libdolfin64-2019.2-dbgsym_2019.2.0~git20201207.b495043-5_amd64.deb'. +dpkg-deb: building package 'libdolfin64-dev' in '../libdolfin64-dev_2019.2.0~git20201207.b495043-5_amd64.deb'. dpkg-deb: building package 'libdolfin-dev-common' in '../libdolfin-dev-common_2019.2.0~git20201207.b495043-5_all.deb'. dpkg-deb: building package 'libdolfin2019.2' in '../libdolfin2019.2_2019.2.0~git20201207.b495043-5_amd64.deb'. +dpkg-deb: building package 'libdolfin-dev' in '../libdolfin-dev_2019.2.0~git20201207.b495043-5_amd64.deb'. dpkg-deb: building package 'libdolfin2019.2-dbgsym' in '../libdolfin2019.2-dbgsym_2019.2.0~git20201207.b495043-5_amd64.deb'. -dpkg-deb: building package 'libdolfin64-dev' in '../libdolfin64-dev_2019.2.0~git20201207.b495043-5_amd64.deb'. -dpkg-deb: building package 'libdolfin64-2019.2' in '../libdolfin64-2019.2_2019.2.0~git20201207.b495043-5_amd64.deb'. -dpkg-deb: building package 'libdolfin64-2019.2-dbgsym' in '../libdolfin64-2019.2-dbgsym_2019.2.0~git20201207.b495043-5_amd64.deb'. dpkg-deb: building package 'dolfin-bin' in '../dolfin-bin_2019.2.0~git20201207.b495043-5_all.deb'. -dpkg-deb: building package 'dolfin-doc' in '../dolfin-doc_2019.2.0~git20201207.b495043-5_all.deb'. dpkg-deb: building package 'python3-dolfin-real' in '../python3-dolfin-real_2019.2.0~git20201207.b495043-5_amd64.deb'. dpkg-deb: building package 'python3-dolfin' in '../python3-dolfin_2019.2.0~git20201207.b495043-5_amd64.deb'. dpkg-deb: building package 'python3-dolfin64-real' in '../python3-dolfin64-real_2019.2.0~git20201207.b495043-5_amd64.deb'. @@ -17126,12 +17165,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/177655/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/177655/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4132282 and its subdirectories -I: Current time: Mon Dec 27 02:47:16 -12 2021 -I: pbuilder-time-stamp: 1640616436 +I: removing directory /srv/workspace/pbuilder/177655 and its subdirectories +I: Current time: Mon Jan 30 12:33:39 +14 2023 +I: pbuilder-time-stamp: 1675031619