Diff of the two buildlogs: -- --- b1/build.log 2023-04-19 15:59:51.378053983 +0000 +++ b2/build.log 2023-04-19 16:22:26.793919755 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue May 21 10:12:58 -12 2024 -I: pbuilder-time-stamp: 1716329578 +I: Current time: Thu Apr 20 05:59:56 +14 2023 +I: pbuilder-time-stamp: 1681919996 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./stimfit_0.16.0.orig.tar.gz] I: copying [./stimfit_0.16.0-1.2.debian.tar.xz] I: Extracting source -gpgv: Signature made Sun Jan 8 07:45:28 2023 -12 +gpgv: Signature made Mon Jan 9 09:45:28 2023 +14 gpgv: using RSA key 08E2400FF7FE8FEDE3ACB52818147B073BAD2B07 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./stimfit_0.16.0-1.2.dsc: no acceptable signature found @@ -27,52 +27,84 @@ dpkg-source: info: applying python3.10.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/21406/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/D01_modify_environment starting +debug: Running on codethink16-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 20 06:00 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' - DISTRIBUTION='bookworm' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='21406' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=30785 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CK3mFQ3m/pbuilderrc_Kcm4 --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CK3mFQ3m/b1 --logfile b1/build.log stimfit_0.16.0-1.2.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CK3mFQ3m/pbuilderrc_aU2N --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CK3mFQ3m/b2 --logfile b2/build.log --extrapackages usrmerge stimfit_0.16.0-1.2.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink9-arm64 4.15.0-209-generic #220-Ubuntu SMP Tue Mar 21 19:52:44 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-209-generic #220-Ubuntu SMP Tue Mar 21 19:52:44 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 20 04:48 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/21406/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 18 00:25 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -416,7 +448,7 @@ Get: 272 http://deb.debian.org/debian bookworm/main arm64 python3-wxgtk4.0 arm64 4.2.0+dfsg-3 [6930 kB] Get: 273 http://deb.debian.org/debian bookworm/main arm64 swig4.0 arm64 4.1.0-0.2 [1299 kB] Get: 274 http://deb.debian.org/debian bookworm/main arm64 swig all 4.1.0-0.2 [321 kB] -Fetched 152 MB in 6s (25.5 MB/s) +Fetched 152 MB in 3s (47.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libargon2-1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) @@ -1553,10 +1585,15 @@ Reading package lists... Building dependency tree... Reading state information... +usrmerge is already the newest version (35). fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/stimfit-0.16.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../stimfit_0.16.0-1.2_source.changes +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/stimfit-0.16.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../stimfit_0.16.0-1.2_source.changes dpkg-buildpackage: info: source package stimfit dpkg-buildpackage: info: source version 0.16.0-1.2 dpkg-buildpackage: info: source distribution unstable @@ -2036,6 +2073,10 @@ biosig4c++/t210/../biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ +biosig4c++/t210/sopen_alpha_read.c: In function 'sopen_alpha_read': +biosig4c++/t210/sopen_alpha_read.c:381:41: warning: implicit declaration of function 'FreeTextEvent' [-Wimplicit-function-declaration] + 381 | FreeTextEvent(hdr, n, t4); + | ^~~~~~~~~~~~~ In file included from biosig4c++/t210/sopen_heka_read.c:29: biosig4c++/t210/../biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); @@ -2050,10 +2091,6 @@ | | | | int size_t {aka long unsigned int} | %li -biosig4c++/t210/sopen_alpha_read.c: In function 'sopen_alpha_read': -biosig4c++/t210/sopen_alpha_read.c:381:41: warning: implicit declaration of function 'FreeTextEvent' [-Wimplicit-function-declaration] - 381 | FreeTextEvent(hdr, n, t4); - | ^~~~~~~~~~~~~ biosig4c++/t210/sopen_alpha_read.c:533:31: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] 533 | hdr->FileName = FileName; | ^ @@ -2547,6 +2584,8 @@ CC libbiosiglite_la-crc4scp.lo CC libbiosiglite_la-sopen_scp_write.lo CC libbiosiglite_la-sandbox.lo + CC libbiosiglite_la-biosig.lo + CC libbiosiglite_la-biosig2.lo In file included from biosig4c++/test0/sandbox.c:31: biosig4c++/test0/../biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); @@ -2554,7 +2593,6 @@ biosig4c++/test0/../biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ - CC libbiosiglite_la-biosig.lo In file included from biosig4c++/biosig.c:65: biosig4c++/biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); @@ -2562,6 +2600,14 @@ biosig4c++/biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ + CC libbiosiglite_la-biosig-HL7aECG-stub.lo +In file included from biosig4c++/biosig2.c:28: +biosig4c++/biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] + 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); + | ^~~~~~~~~~~~~~~~~~~~~~~~ +biosig4c++/biosig.h:533:19: note: declared here + 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ + | ^~~~~~~~~~~~~~~~~~~~~~~~ biosig4c++/biosig.c: In function 'lcm': biosig4c++/biosig.c:362:17: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] 362 | B4C_ERRNUM = B4C_UNSPECIFIC_ERROR; @@ -2575,15 +2621,6 @@ biosig4c++/biosig.c:97:24: note: declared here 97 | ATT_DEPREC const char *B4C_ERRMSG; | ^~~~~~~~~~ - CC libbiosiglite_la-biosig2.lo - CC libbiosiglite_la-biosig-HL7aECG-stub.lo -In file included from biosig4c++/biosig2.c:28: -biosig4c++/biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] - 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); - | ^~~~~~~~~~~~~~~~~~~~~~~~ -biosig4c++/biosig.h:533:19: note: declared here - 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ - | ^~~~~~~~~~~~~~~~~~~~~~~~ biosig4c++/biosig2.c: In function 'biosig_set_patient_name_structured': biosig4c++/biosig2.c:428:52: warning: format '%f' expects argument of type 'double', but argument 3 has type 'const char *' [-Wformat=] 428 | fprintf(stderr,"Error in function %f: total length of name too large (%i > %i)\n",__func__,len1+len2+len3+2,MAX_LENGTH_NAME); @@ -2604,6 +2641,7 @@ biosig4c++/biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ + CC libbiosiglite_la-gdftime.lo biosig4c++/biosig.c: In function 'sopen_extended': biosig4c++/biosig.c:11269:33: warning: implicit declaration of function 'strptime'; did you mean 'strftime'? [-Wimplicit-function-declaration] 11269 | strptime(val,"%d/%m/%Y %T",&T); @@ -2612,7 +2650,6 @@ biosig4c++/biosig.c:7679:33: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 7679 | fread(buf,sz,1,fid); | ^~~~~~~~~~~~~~~~~~~ - CC libbiosiglite_la-gdftime.lo CC libbiosiglite_la-mdc_ecg_codes.lo CC libbiosiglite_la-physicalunits.lo biosig4c++/biosig.c:11925:65: warning: '%s' directive output may be truncated writing up to 132 bytes into a region of size 77 [-Wformat-truncation=] @@ -2642,6 +2679,69 @@ CC cfs.lo CXX hdf5lib.lo CXX abflib.lo +./stfio.cpp: In function 'bool stfio::importFile(const std::string&, filetype, Recording&, const txtImportSettings&, ProgressInfo&)': +./stfio.cpp:215:17: warning: unused variable 'res' [-Wunused-variable] + 215 | int res = stfio::importCFSFile(fName, ReturnData, progDlg); + | ^~~ +In file included from ./stfio.h:71, + from ./stfio.cpp:29: +././recording.h: In copy constructor 'Recording::Recording(const Recording&)': +././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +././recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +./stfio.cpp: In function 'Recording stfio::concatenate(const Recording&, const std::vector&, ProgressInfo&)': +./stfio.cpp:409:12: note: synthesized method 'Recording::Recording(const Recording&)' first required here + 409 | return Concatenated; + | ^~~~~~~~~~~~ +./stfio.cpp: In function 'Recording stfio::multiply(const Recording&, const std::vector&, std::size_t, double)': +./stfio.cpp:429:40: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] + 429 | catch (const std::out_of_range e) { + | ^ ./recording.cpp: In constructor 'Recording::Recording()': ./recording.cpp:24:21: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] 24 | : ChannelArray(0) @@ -2939,69 +3039,6 @@ ./././recording.h:393:17: note: declared here 393 | std::string time0, date; | ^~~~~ -./stfio.cpp: In function 'bool stfio::importFile(const std::string&, filetype, Recording&, const txtImportSettings&, ProgressInfo&)': -./stfio.cpp:215:17: warning: unused variable 'res' [-Wunused-variable] - 215 | int res = stfio::importCFSFile(fName, ReturnData, progDlg); - | ^~~ -In file included from ./stfio.h:71, - from ./stfio.cpp:29: -././recording.h: In copy constructor 'Recording::Recording(const Recording&)': -././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -././recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -././recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -././recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -./stfio.cpp: In function 'Recording stfio::concatenate(const Recording&, const std::vector&, ProgressInfo&)': -./stfio.cpp:409:12: note: synthesized method 'Recording::Recording(const Recording&)' first required here - 409 | return Concatenated; - | ^~~~~~~~~~~~ -./stfio.cpp: In function 'Recording stfio::multiply(const Recording&, const std::vector&, std::size_t, double)': -./stfio.cpp:429:40: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] - 429 | catch (const std::out_of_range e) { - | ^ CXX abffiles.lo CXX csynch.lo CXX filedesc.lo @@ -3076,12 +3113,6 @@ ./abf/axon/AxAbfFio32/abfheadr.cpp:142:14: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated copying 8 bytes from a string of length 10 [-Wstringop-truncation] 142 | strncpy(NewFH.sDACChannelUnits[i], "mV ", ABF_ADCUNITLEN); | ^ -./abf/axon/AxAbfFio32/abfheadr.cpp:119:14: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] - 119 | strncpy(NewFH.sADCChannelName[i], szName, ABF_ADCNAMELEN); - | ^ -./abf/axon/AxAbfFio32/abfheadr.cpp:141:14: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] - 141 | strncpy(NewFH.sDACChannelName[i], szName, ABF_DACNAMELEN); - | ^ In file included from /usr/include/c++/12/bits/shared_ptr.h:53, from /usr/include/c++/12/memory:77, from ./abf/axon/Common/FileReadCache.hpp:19, @@ -3098,20 +3129,25 @@ ./abf/axon/Common/FileReadCache.cpp:67:54: note: returned from 'void* operator new [](std::size_t)' 67 | m_pItemCache.reset(new BYTE[uItemSize * uCacheSize]); | ^ +./abf/axon/AxAbfFio32/abfheadr.cpp:119:14: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] + 119 | strncpy(NewFH.sADCChannelName[i], szName, ABF_ADCNAMELEN); + | ^ +./abf/axon/AxAbfFio32/abfheadr.cpp:141:14: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] + 141 | strncpy(NewFH.sDACChannelName[i], szName, ABF_DACNAMELEN); + | ^ CXX Oldheadr.lo CXX abfutil.lo CXX msbincvt.lo CXX unix.lo CXX abferror.lo - CXX axatffio32.lo ./abf/axon/Common/unix.cpp: In function 'FILE* c_CreateFile(LPCSTR, DWORD, DWORD, LPSECURITY_ATTRIBUTES, DWORD, DWORD, HANDLE)': ./abf/axon/Common/unix.cpp:271:12: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' specified bound 1024 equals destination size [-Wstringop-truncation] 271 | strncpy(fname, filename, 1024); /* Get filename in near var */ | ^ + CXX axatffio32.lo CXX fileio2.lo CXX ProtocolReaderABF2.lo CXX SimpleStringCache.lo - CXX abf2headr.lo In file included from /usr/include/string.h:535, from /usr/include/memory.h:29, from ./abf/axon/AxAbfFio32/../Common/wincpp.hpp:23, @@ -3128,6 +3164,7 @@ ./abf/axon/AxAbfFio32/Oldheadr.cpp:1831:11: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated before terminating nul copying 2 bytes from a string of the same length [-Wstringop-truncation] 1831 | strncpy(pFH->sArithmeticOperator, "+ ", ABF_ARITHMETICOPLEN); | ^ + CXX abf2headr.lo ./abf/axon/AxAbfFio32/Oldheadr.cpp:670:11: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 63 [-Wstringop-truncation] 670 | strncpy(DACLabel, Label+ABF_OLDUNITLEN, ABF_DACUNITLEN); | ^ @@ -3177,6 +3214,7 @@ | ^ CXX atflib.lo CXX axglib.lo + CXX AxoGraph_ReadWrite.lo In file included from /usr/include/c++/12/bits/shared_ptr.h:53, from /usr/include/c++/12/memory:77, from ./abf/axon2/../axon/Common/ArrayPtr.hpp:20, @@ -3197,7 +3235,6 @@ ./abf/axon2/../axon/Common/ArrayPtr.hpp:137:19: note: returned from 'void* operator new [](std::size_t)' 137 | m_pArray.reset(new ITEM[uCount]); | ^~~~~~~~~~~~~~~~ - CXX AxoGraph_ReadWrite.lo CXX fileUtils.lo CXX stringUtils.lo CXX byteswap.lo @@ -3205,8 +3242,6 @@ CXX igorlib.lo CC CrossPlatformFileIO.lo CC WriteWave.lo - CXX common.lo - CXX intanlib.lo ./heka/hekalib.cpp: In function 'void ByteSwap(unsigned char*, int)': ./heka/hekalib.cpp:411:18: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 411 | register int i = 0; @@ -3214,6 +3249,8 @@ ./heka/hekalib.cpp:412:18: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 412 | register int j = n-1; | ^ + CXX common.lo + CXX intanlib.lo CXX streams.lo CXX biosiglib.lo ./biosig/biosiglib.cpp:228:109: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -3273,6 +3310,12 @@ /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ +./gui/app.cpp:1437:30: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 1437 | verString << wxT(__DATE__) << wxT(", ") << wxT(__TIME__); + | ^ +./gui/app.cpp:1437:60: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 1437 | verString << wxT(__DATE__) << wxT(", ") << wxT(__TIME__); + | ^ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, @@ -3281,12 +3324,6 @@ /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ -./gui/app.cpp:1437:30: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 1437 | verString << wxT(__DATE__) << wxT(", ") << wxT(__TIME__); - | ^ -./gui/app.cpp:1437:60: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 1437 | verString << wxT(__DATE__) << wxT(", ") << wxT(__TIME__); - | ^ ./gui/unopt.cpp: In member function 'bool wxStfApp::Init_wxPython()': ./gui/unopt.cpp:178:23: warning: 'void PyEval_InitThreads()' is deprecated [-Wdeprecated-declarations] 178 | PyEval_InitThreads(); @@ -3296,6 +3333,73 @@ /usr/include/python3.11/ceval.h:132:37: note: declared here 132 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void); | ^~~~~~~~~~~~~~~~~~ +./gui/unopt.cpp: In member function 'new_wxwindow wxStfParentFrame::MakePythonWindow(const std::string&, const std::string&, const std::string&, bool, bool, bool, int, int, double, double)': +/usr/include/python3.11/ceval.h:34:34: warning: 'PyObject* PyEval_CallObjectWithKeywords(PyObject*, PyObject*, PyObject*)' is deprecated [-Wdeprecated-declarations] + 34 | PyEval_CallObjectWithKeywords(callable, arg, (PyObject *)NULL) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +./gui/unopt.cpp:483:14: note: in expansion of macro 'PyEval_CallObject' + 483 | result = PyEval_CallObject(func, argtuple); + | ^~~~~~~~~~~~~~~~~ +/usr/include/python3.11/ceval.h:27:43: note: declared here + 27 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords( + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from ./gui/././../../libstfio/stfio.h:71, + from ./gui/././../stf.h:80, + from ./gui/./app.h:178, + from ./gui/doc.cpp:35: +./gui/././../../libstfio/./recording.h: In copy constructor 'Recording::Recording(const Recording&)': +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:17: note: declared here + 393 | std::string time0, date; + | ^~~~~ +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] + 41 | class StfioDll Recording { + | ^~~~~~~~~ +./gui/././../../libstfio/./recording.h:393:24: note: declared here + 393 | std::string time0, date; + | ^~~~ +./gui/doc.cpp: In member function 'Recording wxStfDoc::ReorderChannels()': +./gui/doc.cpp:803:12: note: synthesized method 'Recording::Recording(const Recording&)' first required here + 803 | return writeRec; + | ^~~~~~~~ ./gui/graph.cpp: In constructor 'wxStfGraph::wxStfGraph(wxView*, wxStfChildFrame*, const wxPoint&, const wxSize&, long int)': ./gui/graph.cpp:113:5: warning: 'wxPen::wxPen(const wxColour&, int, int)' is deprecated: use wxPENSTYLE_XXX constants [-Wdeprecated-declarations] 113 | standardPen(*wxBLACK,1,wxSOLID), //Solid black line @@ -3309,6 +3413,10 @@ /usr/include/wx-3.2/wx/gtk/pen.h:51:5: note: declared here 51 | wxPen(const wxColour& col, int width, int style); | ^~~~~ +./gui/doc.cpp: In member function 'void wxStfDoc::FitDecay(wxCommandEvent&)': +./gui/doc.cpp:1243:36: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] + 1243 | catch (const std::out_of_range e) { + | ^ ./gui/graph.cpp:114:5: warning: 'wxPen::wxPen(const wxColour&, int, int)' is deprecated: use wxPENSTYLE_XXX constants [-Wdeprecated-declarations] 114 | standardPen2(*wxRED,1,wxSOLID), //Solid red line | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3336,6 +3444,10 @@ ./gui/graph.cpp:118:5: warning: 'wxPen::wxPen(const wxColour&, int, int)' is deprecated: use wxPENSTYLE_XXX constants [-Wdeprecated-declarations] 118 | peakPen(*wxRED,1,wxSHORT_DASH), //Dashed red line | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +./gui/doc.cpp: In member function 'void wxStfDoc::LFit(wxCommandEvent&)': +./gui/doc.cpp:1278:36: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] + 1278 | catch (const std::out_of_range e) { + | ^ /usr/include/wx-3.2/wx/gtk/pen.h:51:5: note: declared here 51 | wxPen(const wxColour& col, int width, int style); | ^~~~~ @@ -3471,6 +3583,9 @@ /usr/include/wx-3.2/wx/gtk/pen.h:51:5: note: declared here 51 | wxPen(const wxColour& col, int width, int style); | ^~~~~ +./gui/doc.cpp:1299:36: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] + 1299 | catch (const std::out_of_range e) { + | ^ ./gui/graph.cpp:147:5: warning: 'wxPen::wxPen(const wxColour&, int, int)' is deprecated: use wxPENSTYLE_XXX constants [-Wdeprecated-declarations] 147 | peakPrintPen(*wxRED,printSizePen1,wxSHORT_DASH), //Dashed red line | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3522,6 +3637,10 @@ ./gui/graph.cpp:155:5: warning: 'wxPen::wxPen(const wxColour&, int, int)' is deprecated: use wxPENSTYLE_XXX constants [-Wdeprecated-declarations] 155 | averagePrintPen(*wxBLUE,printSizePen1,wxSOLID), //Solid light blue line | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +./gui/doc.cpp: In member function 'void wxStfDoc::LnTransform(wxCommandEvent&)': +./gui/doc.cpp:1323:40: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] + 1323 | catch (const std::out_of_range e) { + | ^ /usr/include/wx-3.2/wx/gtk/pen.h:51:5: note: declared here 51 | wxPen(const wxColour& col, int width, int style); | ^~~~~ @@ -3576,16 +3695,6 @@ /usr/include/wx-3.2/wx/gtk/brush.h:41:5: note: declared here 41 | wxBrush(const wxColour& col, int style); | ^~~~~~~ -./gui/unopt.cpp: In member function 'new_wxwindow wxStfParentFrame::MakePythonWindow(const std::string&, const std::string&, const std::string&, bool, bool, bool, int, int, double, double)': -/usr/include/python3.11/ceval.h:34:34: warning: 'PyObject* PyEval_CallObjectWithKeywords(PyObject*, PyObject*, PyObject*)' is deprecated [-Wdeprecated-declarations] - 34 | PyEval_CallObjectWithKeywords(callable, arg, (PyObject *)NULL) - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -./gui/unopt.cpp:483:14: note: in expansion of macro 'PyEval_CallObject' - 483 | result = PyEval_CallObject(func, argtuple); - | ^~~~~~~~~~~~~~~~~ -/usr/include/python3.11/ceval.h:27:43: note: declared here - 27 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords( - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gui/graph.cpp: In member function 'void wxStfGraph::DoPlot(wxDC*, const Vector_double&, int, int, int, plottype, int)': ./gui/graph.cpp:697:50: warning: 'std::mem_fun1_t<_Ret, _Tp, _Arg> std::mem_fun(_Ret (_Tp::*)(_Arg)) [with _Ret = long int; _Tp = wxStfGraph; _Arg = double]' is deprecated: use 'std::mem_fn' instead [-Wdeprecated-declarations] 697 | yFormatFunc = std::bind1st( std::mem_fun(&wxStfGraph::yFormatD), this); @@ -3608,6 +3717,10 @@ /usr/include/c++/12/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ +./gui/doc.cpp: In member function 'bool wxStfDoc::OnNewfromselectedThis()': +./gui/doc.cpp:1787:40: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] + 1787 | catch (const std::out_of_range e) { + | ^ ./gui/graph.cpp:700:50: warning: 'std::mem_fun1_t<_Ret, _Tp, _Arg> std::mem_fun(_Ret (_Tp::*)(_Arg)) [with _Ret = long int; _Tp = wxStfGraph; _Arg = double]' is deprecated: use 'std::mem_fn' instead [-Wdeprecated-declarations] 700 | yFormatFunc = std::bind1st( std::mem_fun(&wxStfGraph::yFormatD2), this); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ @@ -3632,6 +3745,10 @@ /usr/include/c++/12/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ +./gui/doc.cpp: In member function 'void wxStfDoc::SelectTracesOfType(wxCommandEvent&)': +./gui/doc.cpp:1855:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 1855 | for (size_t n=0; n < (int)get()[GetCurChIndex()].size(); ++n) { + | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gui/graph.cpp: In member function 'void wxStfGraph::DoPrint(wxDC*, const Vector_double&, int, int, plottype)': ./gui/graph.cpp:835:50: warning: 'std::mem_fun1_t<_Ret, _Tp, _Arg> std::mem_fun(_Ret (_Tp::*)(_Arg)) [with _Ret = long int; _Tp = wxStfGraph; _Arg = double]' is deprecated: use 'std::mem_fn' instead [-Wdeprecated-declarations] 835 | yFormatFunc = std::bind1st( std::mem_fun(&wxStfGraph::yFormatD), this); @@ -3657,90 +3774,6 @@ /usr/include/c++/12/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ -./gui/graph.cpp: In member function 'void wxStfGraph::ChangeTrace(int)': -./gui/graph.cpp:2096:46: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 2096 | if (!sec_attr.eventList.empty() && trace != Doc()->GetCurSecIndex()) { - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from ./gui/././../../libstfio/stfio.h:71, - from ./gui/././../stf.h:80, - from ./gui/./app.h:178, - from ./gui/doc.cpp:35: -./gui/././../../libstfio/./recording.h: In copy constructor 'Recording::Recording(const Recording&)': -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:17: note: declared here - 393 | std::string time0, date; - | ^~~~~ -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -./gui/././../../libstfio/./recording.h:41:16: warning: 'Recording::date' is deprecated [-Wdeprecated-declarations] - 41 | class StfioDll Recording { - | ^~~~~~~~~ -./gui/././../../libstfio/./recording.h:393:24: note: declared here - 393 | std::string time0, date; - | ^~~~ -./gui/doc.cpp: In member function 'Recording wxStfDoc::ReorderChannels()': -./gui/doc.cpp:803:12: note: synthesized method 'Recording::Recording(const Recording&)' first required here - 803 | return writeRec; - | ^~~~~~~~ -./gui/doc.cpp: In member function 'void wxStfDoc::FitDecay(wxCommandEvent&)': -./gui/doc.cpp:1243:36: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] - 1243 | catch (const std::out_of_range e) { - | ^ -./gui/doc.cpp: In member function 'void wxStfDoc::LFit(wxCommandEvent&)': -./gui/doc.cpp:1278:36: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] - 1278 | catch (const std::out_of_range e) { - | ^ -./gui/doc.cpp:1299:36: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] - 1299 | catch (const std::out_of_range e) { - | ^ -./gui/doc.cpp: In member function 'void wxStfDoc::LnTransform(wxCommandEvent&)': -./gui/doc.cpp:1323:40: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] - 1323 | catch (const std::out_of_range e) { - | ^ -./gui/doc.cpp: In member function 'bool wxStfDoc::OnNewfromselectedThis()': -./gui/doc.cpp:1787:40: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] - 1787 | catch (const std::out_of_range e) { - | ^ -./gui/doc.cpp: In member function 'void wxStfDoc::SelectTracesOfType(wxCommandEvent&)': -./gui/doc.cpp:1855:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 1855 | for (size_t n=0; n < (int)get()[GetCurChIndex()].size(); ++n) { - | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gui/doc.cpp: In member function 'void wxStfDoc::MarkEvents(wxCommandEvent&)': ./gui/doc.cpp:2332:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2332 | if (*cit + eventl >= cursec().get().size()) { @@ -3750,6 +3783,10 @@ /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1477:1: warning: 'int _import_array()' defined but not used [-Wunused-function] 1477 | _import_array(void) | ^~~~~~~~~~~~~ +./gui/graph.cpp: In member function 'void wxStfGraph::ChangeTrace(int)': +./gui/graph.cpp:2096:46: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 2096 | if (!sec_attr.eventList.empty() && trace != Doc()->GetCurSecIndex()) { + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1477:1: warning: 'int _import_array()' defined but not used [-Wunused-function] @@ -3771,9 +3808,6 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/stimfit/py' /usr/bin/swig -c++ -python -o pystf_wrap.cxx pystf.i CXX libpystf_la-pystf.lo -pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. -pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. -pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, @@ -3781,6 +3815,9 @@ /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ +pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. +pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. +pystf.i:74: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. cat ./gccwarn ./pystf_wrap.cxx > ./pystf_wrap_tmp.cxx mv ./pystf_wrap_tmp.cxx ./pystf_wrap.cxx CXX libpystf_la-pystf_wrap.lo @@ -3859,17 +3896,17 @@ ./src/test/gtest/include/gtest/gtest.h:1448:16: warning: comparison of integer expressions of different signedness: 'const long unsigned int' and 'const int' [-Wsign-compare] 1448 | if (expected == actual) { | ~~~~~~~~~^~~~~~~~~ -In file included from ./src/test/channel.cpp:2: +In file included from ./src/test/recording.cpp:2: ./src/test/gtest/include/gtest/gtest.h: In instantiation of 'testing::AssertionResult testing::internal::CmpHelperEQ(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int]': ./src/test/gtest/include/gtest/gtest.h:1484:23: required from 'static testing::AssertionResult testing::internal::EqHelper::Compare(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int; bool lhs_is_null_literal = false]' -./src/test/channel.cpp:7:5: required from here +./src/test/recording.cpp:7:5: required from here ./src/test/gtest/include/gtest/gtest.h:1448:16: warning: comparison of integer expressions of different signedness: 'const long unsigned int' and 'const int' [-Wsign-compare] 1448 | if (expected == actual) { | ~~~~~~~~~^~~~~~~~~ -In file included from ./src/test/recording.cpp:2: +In file included from ./src/test/channel.cpp:2: ./src/test/gtest/include/gtest/gtest.h: In instantiation of 'testing::AssertionResult testing::internal::CmpHelperEQ(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int]': ./src/test/gtest/include/gtest/gtest.h:1484:23: required from 'static testing::AssertionResult testing::internal::EqHelper::Compare(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int; bool lhs_is_null_literal = false]' -./src/test/recording.cpp:7:5: required from here +./src/test/channel.cpp:7:5: required from here ./src/test/gtest/include/gtest/gtest.h:1448:16: warning: comparison of integer expressions of different signedness: 'const long unsigned int' and 'const int' [-Wsign-compare] 1448 | if (expected == actual) { | ~~~~~~~~~^~~~~~~~~ @@ -3977,13 +4014,13 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/libbiosiglite' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libbiosiglite.so /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.so libtool: install: /usr/bin/install -c .libs/libbiosiglite.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.la libtool: install: /usr/bin/install -c .libs/libbiosiglite.a /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.a libtool: install: chmod 644 /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.a libtool: install: ranlib /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4009,13 +4046,13 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/libstfio' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libstfio.so /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.so libtool: install: /usr/bin/install -c .libs/libstfio.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.la libtool: install: /usr/bin/install -c .libs/libstfio.a /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.a libtool: install: chmod 644 /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.a libtool: install: ranlib /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4039,15 +4076,15 @@ Making install in libstfnum make[3]: Entering directory '/build/stimfit-0.16.0/src/libstfnum' make[4]: Entering directory '/build/stimfit-0.16.0/src/libstfnum' -make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' +make[4]: Nothing to be done for 'install-data-am'. + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libstfnum.so /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.so libtool: install: /usr/bin/install -c .libs/libstfnum.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.la libtool: install: /usr/bin/install -c .libs/libstfnum.a /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.a libtool: install: chmod 644 /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.a libtool: install: ranlib /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4073,15 +4110,15 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/stimfit' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstimfit.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstimfit.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: relinking 'libstimfit.la' -libtool: install: (cd /build/stimfit-0.16.0/src/stimfit; /bin/bash "/build/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.2 -I/usr/include/wx-3.2 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -ffile-prefix-map=/build/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib/aarch64-linux-gnu -lpython3.11 -Wl,-rpath,/usr/lib/stimfit -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libstimfit.la -rpath /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libstimfit_la-stf.lo libstimfit_la-app.lo libstimfit_la-unopt.lo libstimfit_la-doc.lo libstimfit_la-copygrid.lo libstimfit_la-graph.lo libstimfit_la-printout.lo libstimfit_la-parentframe.lo libstimfit_la-childframe.lo libstimfit_la-view.lo libstimfit_la-table.lo libstimfit_la-zoom.lo libstimfit_la-convertdlg.lo libstimfit_la-cursorsdlg.lo libstimfit_la-eventdlg.lo libstimfit_la-fitseldlg.lo libstimfit_la-smalldlgs.lo libstimfit_la-usrdlg.lo -L/usr/lib/aarch64-linux-gnu -pthread -lwx_baseu-3.2 -lwx_gtk3u_core-3.2 -lwx_gtk3u_aui-3.2 -lwx_baseu_net-3.2 ../libstfio/libstfio.la ../libstfnum/libstfnum.la ../libbiosiglite/libbiosiglite.la ) +libtool: install: (cd /build/stimfit-0.16.0/src/stimfit; /bin/sh "/build/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.2 -I/usr/include/wx-3.2 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -ffile-prefix-map=/build/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib/aarch64-linux-gnu -lpython3.11 -Wl,-rpath,/usr/lib/stimfit -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libstimfit.la -rpath /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libstimfit_la-stf.lo libstimfit_la-app.lo libstimfit_la-unopt.lo libstimfit_la-doc.lo libstimfit_la-copygrid.lo libstimfit_la-graph.lo libstimfit_la-printout.lo libstimfit_la-parentframe.lo libstimfit_la-childframe.lo libstimfit_la-view.lo libstimfit_la-table.lo libstimfit_la-zoom.lo libstimfit_la-convertdlg.lo libstimfit_la-cursorsdlg.lo libstimfit_la-eventdlg.lo libstimfit_la-fitseldlg.lo libstimfit_la-smalldlgs.lo libstimfit_la-usrdlg.lo -L/usr/lib/aarch64-linux-gnu -pthread -lwx_baseu-3.2 -lwx_gtk3u_core-3.2 -lwx_gtk3u_aui-3.2 -lwx_baseu_net-3.2 ../libstfio/libstfio.la ../libstfnum/libstfnum.la ../libbiosiglite/libbiosiglite.la ) libtool: install: /usr/bin/install -c .libs/libstimfit.soT /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.so libtool: install: /usr/bin/install -c .libs/libstimfit.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.la libtool: install: /usr/bin/install -c .libs/libstimfit.a /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.a libtool: install: chmod 644 /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.a libtool: install: ranlib /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4107,15 +4144,15 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/stimfit/py' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../../libtool --mode=install /usr/bin/install -c libpystf.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../../libtool --mode=install /usr/bin/install -c libpystf.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: relinking 'libpystf.la' -libtool: install: (cd /build/stimfit-0.16.0/src/stimfit/py; /bin/bash "/build/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.2 -I/usr/include/wx-3.2 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -ffile-prefix-map=/build/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib/aarch64-linux-gnu -lpython3.11 -Wl,-rpath,/usr/lib/stimfit -avoid-version -lcholmod -Wl,-z,relro -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystf.la -rpath /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libpystf_la-pystf.lo libpystf_la-pystf_wrap.lo ../libstimfit.la ../../libstfio/libstfio.la -L/usr/lib/aarch64-linux-gnu -pthread -lwx_baseu-3.2 -lwx_gtk3u_core-3.2 -lwx_gtk3u_aui-3.2 -lwx_baseu_net-3.2 ../../libbiosiglite/libbiosiglite.la ) +libtool: install: (cd /build/stimfit-0.16.0/src/stimfit/py; /bin/sh "/build/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.2 -I/usr/include/wx-3.2 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -ffile-prefix-map=/build/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib/aarch64-linux-gnu -lpython3.11 -Wl,-rpath,/usr/lib/stimfit -avoid-version -lcholmod -Wl,-z,relro -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystf.la -rpath /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libpystf_la-pystf.lo libpystf_la-pystf_wrap.lo ../libstimfit.la ../../libstfio/libstfio.la -L/usr/lib/aarch64-linux-gnu -pthread -lwx_baseu-3.2 -lwx_gtk3u_core-3.2 -lwx_gtk3u_aui-3.2 -lwx_baseu_net-3.2 ../../libbiosiglite/libbiosiglite.la ) libtool: install: /usr/bin/install -c .libs/libpystf.soT /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.so libtool: install: /usr/bin/install -c .libs/libpystf.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.la libtool: install: /usr/bin/install -c .libs/libpystf.a /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.a libtool: install: chmod 644 /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.a libtool: install: ranlib /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4170,7 +4207,7 @@ make[3]: Entering directory '/build/stimfit-0.16.0' make[3]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/bin' - /bin/bash ./libtool --mode=install /usr/bin/install -c stimfit '/build/stimfit-0.16.0/debian/tmp/usr/bin' + /bin/sh ./libtool --mode=install /usr/bin/install -c stimfit '/build/stimfit-0.16.0/debian/tmp/usr/bin' libtool: warning: './src/stimfit/libstimfit.la' has not been installed in '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: './src/libstfio/libstfio.la' has not been installed in '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: './src/libstfnum/libstfnum.la' has not been installed in '/build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' @@ -4178,8 +4215,8 @@ libtool: install: /usr/bin/install -c .libs/stimfit /build/stimfit-0.16.0/debian/tmp/usr/bin/stimfit /usr/bin/make install-exec-hook make[4]: Entering directory '/build/stimfit-0.16.0' -/bin/bash ./libtool --finish /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +/bin/sh ./libtool --finish /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4411,6 +4448,12 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/pystfio' /usr/bin/swig -c++ -python -o ../../src/pystfio/pystfio_wrap.cxx ../../src/pystfio/pystfio.i CXX libpystfio_la-pystfio.lo +../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. +../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. +../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. +cat ../../src/stimfit/py/gccwarn ../../src/pystfio/pystfio_wrap.cxx > ../../src/pystfio/pystfio_wrap_tmp.cxx +mv ../../src/pystfio/pystfio_wrap_tmp.cxx ../../src/pystfio/pystfio_wrap.cxx + CXX libpystfio_la-pystfio_wrap.lo In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, @@ -4419,12 +4462,6 @@ /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ -../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. -../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. -../../src/pystfio/pystfio.i:391: Warning 490: Fragment 'NumPy_Backward_Compatibility' not found. -cat ../../src/stimfit/py/gccwarn ../../src/pystfio/pystfio_wrap.cxx > ../../src/pystfio/pystfio_wrap_tmp.cxx -mv ../../src/pystfio/pystfio_wrap_tmp.cxx ../../src/pystfio/pystfio_wrap.cxx - CXX libpystfio_la-pystfio_wrap.lo In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, @@ -4457,9 +4494,9 @@ Making install in libbiosiglite make[3]: Entering directory '/build/stimfit-0.16.0/src/libbiosiglite' make[4]: Entering directory '/build/stimfit-0.16.0/src/libbiosiglite' -make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' +make[4]: Nothing to be done for 'install-data-am'. + /bin/sh ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' libtool: install: /usr/bin/install -c .libs/libbiosiglite.so /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libbiosiglite.so libtool: install: /usr/bin/install -c .libs/libbiosiglite.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libbiosiglite.la libtool: install: /usr/bin/install -c .libs/libbiosiglite.a /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libbiosiglite.a @@ -4473,7 +4510,7 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/libstfio' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' libtool: install: /usr/bin/install -c .libs/libstfio.so /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libstfio.so libtool: install: /usr/bin/install -c .libs/libstfio.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libstfio.la libtool: install: /usr/bin/install -c .libs/libstfio.a /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libstfio.a @@ -4487,7 +4524,7 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/libstfnum' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' libtool: install: /usr/bin/install -c .libs/libstfnum.so /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libstfnum.so libtool: install: /usr/bin/install -c .libs/libstfnum.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libstfnum.la libtool: install: /usr/bin/install -c .libs/libstfnum.a /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libstfnum.a @@ -4501,15 +4538,15 @@ make[4]: Entering directory '/build/stimfit-0.16.0/src/pystfio' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libpystfio.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libpystfio.la '/build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio' libtool: warning: relinking 'libpystfio.la' -libtool: install: (cd /build/stimfit-0.16.0/src/pystfio; /bin/bash "/build/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -fPIC -g -O2 -ffile-prefix-map=/build/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib/aarch64-linux-gnu -lpython3.11 -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystfio.la -rpath /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio libpystfio_la-pystfio.lo libpystfio_la-pystfio_wrap.lo ./../libstfio/libstfio.la ./../libstfnum/libstfnum.la ./../libbiosiglite/libbiosiglite.la ) +libtool: install: (cd /build/stimfit-0.16.0/src/pystfio; /bin/sh "/build/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -fPIC -g -O2 -ffile-prefix-map=/build/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib/aarch64-linux-gnu -lpython3.11 -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystfio.la -rpath /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio libpystfio_la-pystfio.lo libpystfio_la-pystfio_wrap.lo ./../libstfio/libstfio.la ./../libstfnum/libstfnum.la ./../libbiosiglite/libbiosiglite.la ) libtool: install: /usr/bin/install -c .libs/libpystfio.soT /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libpystfio.so libtool: install: /usr/bin/install -c .libs/libpystfio.lai /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libpystfio.la libtool: install: /usr/bin/install -c .libs/libpystfio.a /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libpystfio.a libtool: install: chmod 644 /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libpystfio.a libtool: install: ranlib /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio/libpystfio.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio ---------------------------------------------------------------------- Libraries have been installed in: /build/stimfit-0.16.0/debian/tmp/usr/lib/python3.11/site-packages/stfio @@ -4582,10 +4619,10 @@ dh_installchangelogs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/stimfit/usr/share/doc/stimfit install -p -m0644 debian/.debhelper/generated/stimfit/dh_installchangelogs.dch.trimmed debian/stimfit/usr/share/doc/stimfit/changelog.Debian - install -m0755 -d debian/stimfit-dbg/usr/share/doc/stimfit-dbg - install -p -m0644 debian/.debhelper/generated/stimfit-dbg/dh_installchangelogs.dch.trimmed debian/stimfit-dbg/usr/share/doc/stimfit-dbg/changelog.Debian install -m0755 -d debian/python3-stfio/usr/share/doc/python3-stfio install -p -m0644 debian/.debhelper/generated/python3-stfio/dh_installchangelogs.dch.trimmed debian/python3-stfio/usr/share/doc/python3-stfio/changelog.Debian + install -m0755 -d debian/stimfit-dbg/usr/share/doc/stimfit-dbg + install -p -m0644 debian/.debhelper/generated/stimfit-dbg/dh_installchangelogs.dch.trimmed debian/stimfit-dbg/usr/share/doc/stimfit-dbg/changelog.Debian dh_installdocs dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/stimfit/usr/share/doc/stimfit @@ -4640,17 +4677,17 @@ dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd debian/stimfit dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) - cd debian/stimfit-dbg -dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd debian/python3-stfio +dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) + cd debian/stimfit-dbg chmod a-x usr/share/doc/stimfit-dbg/changelog.Debian + gzip -9nf usr/share/doc/stimfit-dbg/changelog.Debian chmod a-x usr/share/doc/python3-stfio/changelog.Debian + cd '/build/stimfit-0.16.0' chmod a-x usr/share/doc/stimfit/changelog.Debian usr/share/man/man1/stimfit.1 gzip -9nf usr/share/doc/python3-stfio/changelog.Debian - gzip -9nf usr/share/doc/stimfit/changelog.Debian usr/share/man/man1/stimfit.1 - gzip -9nf usr/share/doc/stimfit-dbg/changelog.Debian - cd '/build/stimfit-0.16.0' cd '/build/stimfit-0.16.0' + gzip -9nf usr/share/doc/stimfit/changelog.Debian usr/share/man/man1/stimfit.1 cd '/build/stimfit-0.16.0' dh_strip --dbg-package=stimfit-dbg dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use) @@ -4716,19 +4753,19 @@ find debian/stimfit -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/stimfit-dbg -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-stfio -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 - find debian/python3-stfio ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/stimfit ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s + find debian/python3-stfio ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/stimfit-dbg ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/python3-stfio/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-stfio/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/stimfit/usr/share/doc -type f -a -true -a ! -regex 'debian/stimfit/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/stimfit-dbg/usr/share/doc -type f -a -true -a ! -regex 'debian/stimfit-dbg/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-stfio/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-stfio/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-stfio/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/stimfit/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/stimfit-dbg/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/stimfit-dbg/usr/share/doc -type f -a -true -a ! -regex 'debian/stimfit-dbg/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/stimfit/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/stimfit-dbg/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-stfio -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/stimfit-dbg -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/stimfit -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/stimfit-dbg -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-stfio/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/stimfit-dbg/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/stimfit/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x @@ -4743,14 +4780,14 @@ D: dh_python3 debhelper:183: source=stimfit, binary packages=['stimfit', 'python3-stfio'] D: dh_python3 dh_python3:204: processing package stimfit... D: dh_python3 tools:102: fix_shebang (debian/stimfit/usr/bin/stimfit): cannot parse binary file -D: dh_python3 fs:400: package stimfit details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {'/usr/lib/stimfit': {'ext_no_version': {'debian/stimfit/usr/lib/stimfit/_stf.so', 'debian/stimfit/usr/lib/stimfit/libbiosiglite.so', 'debian/stimfit/usr/lib/stimfit/libstimfit.so', 'debian/stimfit/usr/lib/stimfit/libstfio.so', 'debian/stimfit/usr/lib/stimfit/libpystf.so', 'debian/stimfit/usr/lib/stimfit/libstfnum.so'}, 'compile': True}}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} +D: dh_python3 fs:400: package stimfit details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {'/usr/lib/stimfit': {'ext_no_version': {'debian/stimfit/usr/lib/stimfit/libstfnum.so', 'debian/stimfit/usr/lib/stimfit/libstfio.so', 'debian/stimfit/usr/lib/stimfit/libpystf.so', 'debian/stimfit/usr/lib/stimfit/libbiosiglite.so', 'debian/stimfit/usr/lib/stimfit/libstimfit.so', 'debian/stimfit/usr/lib/stimfit/_stf.so'}, 'compile': True}}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package stimfit -D: dh_python3 depends:281: D={'python3 (<< 3.12)', 'python3 (>= 3.11~)', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[('/usr/lib/stimfit', '-V 3.11')] +D: dh_python3 depends:281: D={'python3:any', 'python3 (<< 3.12)', 'python3 (>= 3.11~)'}; R=[]; S=[]; E=[], B=[]; RT=[('/usr/lib/stimfit', '-V 3.11')] D: dh_python3 dh_python3:204: processing package python3-stfio... D: dh_python3 fs:52: moving files from debian/python3-stfio/usr/lib/python3.11/site-packages to debian/python3-stfio/usr/lib/python3/dist-packages/ D: dh_python3 fs:400: package python3-stfio details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3')}, 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-stfio -D: dh_python3 depends:281: D={'python3:any', 'python3.11', 'python3 (>= 3~)'}; R=[]; S=[]; E=[], B=[]; RT=[] +D: dh_python3 depends:281: D={'python3.11', 'python3 (>= 3~)', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] [ -x /usr/bin/dh_numpy ] && dh_numpy || : dh_makeshlibs dh_makeshlibs: warning: Compatibility levels before 10 are deprecated (level 9 in use) @@ -4771,25 +4808,25 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfnum.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' -dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio14vec_scal_minusERKSt6vectorIdSaIdEEd: it's probably a plugin -dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfio.so contains an unresolvable reference to symbol biosig_get_manufacturer_serial_number: it's probably a plugin +dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' +dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfio.so contains an unresolvable reference to symbol biosig_set_samplerate: it's probably a plugin dpkg-shlibdeps: warning: 50 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio14vec_scal_minusERKSt6vectorIdSaIdEEd: it's probably a plugin +dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio12vec_scal_divERKSt6vectorIdSaIdEEd: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-stfio/usr/lib/python3/dist-packages/stfio/_stfio.so was not linked against libbiosiglite.so (it uses none of the library's symbols) -dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' -dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfio.so contains an unresolvable reference to symbol biosig_get_nth_event: it's probably a plugin +dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfio.so contains an unresolvable reference to symbol biosig_get_channel: it's probably a plugin dpkg-shlibdeps: warning: 50 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' -dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libpystf.so contains an unresolvable reference to symbol _ZN6stfnum5Table11SetColLabelEmRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE: it's probably a plugin -dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfnum.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfnum.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' +dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio14vec_scal_minusERKSt6vectorIdSaIdEEd: it's probably a plugin +dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) +dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libpystf.so contains an unresolvable reference to symbol _ZN6stfnum5lmFitERKSt6vectorIdSaIdEEdRKNS_10storedFuncES4_bRS2_RNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERi: it's probably a plugin +dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/stimfit/usr/lib/stimfit/libstimfit.so was not linked against libbiosiglite.so (it uses none of the library's symbols) dh_installdeb dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use) @@ -4821,30 +4858,30 @@ echo misc:Depends= >> debian/python3-stfio.substvars echo misc:Pre-Depends= >> debian/python3-stfio.substvars dpkg-gencontrol -ppython3-stfio -ldebian/changelog -Tdebian/python3-stfio.substvars -Pdebian/python3-stfio - install -m0755 -d debian/stimfit/DEBIAN - echo misc:Depends= >> debian/stimfit.substvars - echo misc:Pre-Depends= >> debian/stimfit.substvars - dpkg-gencontrol -pstimfit -ldebian/changelog -Tdebian/stimfit.substvars -Pdebian/stimfit install -m0755 -d debian/stimfit-dbg/DEBIAN echo misc:Depends= >> debian/stimfit-dbg.substvars echo misc:Pre-Depends= >> debian/stimfit-dbg.substvars dpkg-gencontrol -pstimfit-dbg -ldebian/changelog -Tdebian/stimfit-dbg.substvars -Pdebian/stimfit-dbg "-DBuild-Ids=68dbe0280b57cba772877f404b0879fa9dbd879d 77a9fd6b01fbe7317dafa946a845a4c2d48f38dc 7879dc944398c6235ca42b677a4f2692632ba1c2 aac81c7ec87fd0fc541ffb91c66e3a5f5f9c6b8e ae8d6a462949ebd145ef43734a55687509e7aa5a bec4143181438f78b929d674e45eb8ea06b41374 f66b6799a78367c0ebe5e8ddf1cf7388a2d7290c" + install -m0755 -d debian/stimfit/DEBIAN + echo misc:Depends= >> debian/stimfit.substvars + echo misc:Pre-Depends= >> debian/stimfit.substvars + dpkg-gencontrol -pstimfit -ldebian/changelog -Tdebian/stimfit.substvars -Pdebian/stimfit dpkg-gencontrol: warning: Provides field of package python3-stfio: substitution variable ${python3:Provides} used, but is not defined - chmod 0644 -- debian/stimfit-dbg/DEBIAN/control - chown 0:0 -- debian/stimfit-dbg/DEBIAN/control chmod 0644 -- debian/python3-stfio/DEBIAN/control chown 0:0 -- debian/python3-stfio/DEBIAN/control + chmod 0644 -- debian/stimfit-dbg/DEBIAN/control + chown 0:0 -- debian/stimfit-dbg/DEBIAN/control chmod 0644 -- debian/stimfit/DEBIAN/control chown 0:0 -- debian/stimfit/DEBIAN/control dh_md5sums + install -m0755 -d debian/stimfit/DEBIAN install -m0755 -d debian/python3-stfio/DEBIAN install -m0755 -d debian/stimfit-dbg/DEBIAN - install -m0755 -d debian/stimfit/DEBIAN cd debian/python3-stfio >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/stimfit >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/stimfit-dbg >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-stfio/DEBIAN/md5sums chown 0:0 -- debian/python3-stfio/DEBIAN/md5sums + cd debian/stimfit-dbg >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/stimfit/DEBIAN/md5sums chown 0:0 -- debian/stimfit/DEBIAN/md5sums chmod 0644 -- debian/stimfit-dbg/DEBIAN/md5sums @@ -4853,9 +4890,9 @@ dpkg-deb --build debian/stimfit .. dpkg-deb --build debian/stimfit-dbg .. dpkg-deb --build debian/python3-stfio .. +dpkg-deb: building package 'python3-stfio' in '../python3-stfio_0.16.0-1.2_arm64.deb'. dpkg-deb: building package 'stimfit-dbg' in '../stimfit-dbg_0.16.0-1.2_arm64.deb'. dpkg-deb: building package 'stimfit' in '../stimfit_0.16.0-1.2_arm64.deb'. -dpkg-deb: building package 'python3-stfio' in '../python3-stfio_0.16.0-1.2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../stimfit_0.16.0-1.2_arm64.buildinfo dpkg-genchanges --build=binary -O../stimfit_0.16.0-1.2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -4863,12 +4900,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/30785/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/21406 and its subdirectories -I: Current time: Tue May 21 10:22:50 -12 2024 -I: pbuilder-time-stamp: 1716330170 +I: removing directory /srv/workspace/pbuilder/30785 and its subdirectories +I: Current time: Thu Apr 20 06:22:25 +14 2023 +I: pbuilder-time-stamp: 1681921345