Diff of the two buildlogs: -- --- b1/build.log 2023-04-16 19:46:31.405571867 +0000 +++ b2/build.log 2023-04-16 19:49:54.704554662 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Apr 16 07:44:39 -12 2023 -I: pbuilder-time-stamp: 1681674279 +I: Current time: Sun May 19 16:09:35 +14 2024 +I: pbuilder-time-stamp: 1716084575 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./ciftilib_1.6.0.orig.tar.gz] I: copying [./ciftilib_1.6.0-2.debian.tar.xz] I: Extracting source -gpgv: Signature made Sat Jan 23 04:42:37 2021 -12 +gpgv: Signature made Sun Jan 24 06:42:37 2021 +14 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key @@ -28,52 +28,84 @@ dpkg-source: info: applying 0002-Fix-compilation-with-Boost-1.71.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/24619/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/D01_modify_environment starting +debug: Running on codethink15-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 19 16:09 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' - DISTRIBUTION='bookworm' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='24619' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=25617 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.csLpeC02/pbuilderrc_7hxw --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.csLpeC02/b1 --logfile b1/build.log ciftilib_1.6.0-2.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.csLpeC02/pbuilderrc_vSUU --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.csLpeC02/b2 --logfile b2/build.log --extrapackages usrmerge ciftilib_1.6.0-2.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink12-arm64 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 14 22:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/24619/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 19 06:47 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -223,7 +255,7 @@ Get: 100 http://deb.debian.org/debian bookworm/main arm64 libxml++2.6-2v5 arm64 2.40.1-3 [83.7 kB] Get: 101 http://deb.debian.org/debian bookworm/main arm64 libxml2-dev arm64 2.9.14+dfsg-1.1+b3 [740 kB] Get: 102 http://deb.debian.org/debian bookworm/main arm64 libxml++2.6-dev arm64 2.40.1-3 [57.4 kB] -Fetched 111 MB in 3s (41.2 MB/s) +Fetched 111 MB in 2s (46.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) @@ -648,8 +680,17 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/ciftilib-1.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ciftilib_1.6.0-2_source.changes +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/ciftilib-1.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ciftilib_1.6.0-2_source.changes dpkg-buildpackage: info: source package ciftilib dpkg-buildpackage: info: source version 1.6.0-2 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CMakeFiles/Cifti.dir/src/Cifti/CiftiBrainModelsMap.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/CiftiBrainModelsMap.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/CiftiBrainModelsMap.cxx /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -DCifti_EXPORTS -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -fPIC -std=gnu++11 -MD -MT CMakeFiles/Cifti.dir/src/Cifti/CiftiLabelsMap.cxx.o -MF CMakeFiles/Cifti.dir/src/Cifti/CiftiLabelsMap.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/CiftiLabelsMap.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/CiftiLabelsMap.cxx -[ 30%] Building CXX object CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o -/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -DCifti_EXPORTS -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -fPIC -std=gnu++11 -MD -MT CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o -MF CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/CiftiParcelsMap.cxx In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, - from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.cxx:28: + from /build/ciftilib-1.6.0/src/Cifti/CiftiLabelsMap.h:31, + from /build/ciftilib-1.6.0/src/Cifti/CiftiLabelsMap.cxx:28: /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ @@ -1554,19 +1594,6 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, - from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, - from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, - from /build/ciftilib-1.6.0/src/Cifti/CiftiBrainModelsMap.h:31, - from /build/ciftilib-1.6.0/src/Cifti/CiftiBrainModelsMap.cxx:28: -/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; - | ^~~~~~~~ -In file included from /usr/include/c++/12/memory:76, - from /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:14: -/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here - 64 | template class auto_ptr; - | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69: /usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 108 | std::auto_ptr pimpl_; @@ -1581,13 +1608,6 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54: -/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 260 | std::auto_ptr propertyreader; - | ^~~~~~~~ -/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here - 64 | template class auto_ptr; - | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73: /usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 159 | std::auto_ptr pimpl_; @@ -1595,9 +1615,9 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69: -/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 108 | std::auto_ptr pimpl_; +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75: +/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 149 | std::auto_ptr pimpl_; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; @@ -1605,8 +1625,8 @@ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, - from /build/ciftilib-1.6.0/src/Cifti/CiftiLabelsMap.h:31, - from /build/ciftilib-1.6.0/src/Cifti/CiftiLabelsMap.cxx:28: + from /build/ciftilib-1.6.0/src/Cifti/CiftiXML.h:31, + from /build/ciftilib-1.6.0/src/Cifti/CiftiXML.cxx:28: /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ @@ -1615,6 +1635,20 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54: +/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 260 | std::auto_ptr propertyreader; + | ^~~~~~~~ +/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here + 64 | template class auto_ptr; + | ^~~~~~~~ +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69: +/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 108 | std::auto_ptr pimpl_; + | ^~~~~~~~ +/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here + 64 | template class auto_ptr; + | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70: /usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 99 | std::auto_ptr pimpl_; @@ -1622,6 +1656,13 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73: +/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 159 | std::auto_ptr pimpl_; + | ^~~~~~~~ +/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here + 64 | template class auto_ptr; + | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75: /usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 149 | std::auto_ptr pimpl_; @@ -1629,10 +1670,15 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73: -/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 159 | std::auto_ptr pimpl_; +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, + from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, + from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, + from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.cxx:28: +/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ +In file included from /usr/include/c++/12/memory:76, + from /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:14: /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ @@ -1643,13 +1689,6 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75: -/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 149 | std::auto_ptr pimpl_; - | ^~~~~~~~ -/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here - 64 | template class auto_ptr; - | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69: /usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 108 | std::auto_ptr pimpl_; @@ -1681,8 +1720,8 @@ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, - from /build/ciftilib-1.6.0/src/Cifti/CiftiXML.h:31, - from /build/ciftilib-1.6.0/src/Cifti/CiftiXML.cxx:28: + from /build/ciftilib-1.6.0/src/Cifti/CiftiBrainModelsMap.h:31, + from /build/ciftilib-1.6.0/src/Cifti/CiftiBrainModelsMap.cxx:28: /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ @@ -1726,6 +1765,8 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ +[ 30%] Building CXX object CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o +/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -DCifti_EXPORTS -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -fPIC -std=gnu++11 -MD -MT CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o -MF CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/CiftiParcelsMap.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/CiftiParcelsMap.cxx In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, @@ -1779,11 +1820,13 @@ /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -DCifti_EXPORTS -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -fPIC -std=gnu++11 -MD -MT CMakeFiles/Cifti.dir/src/Cifti/CiftiScalarsMap.cxx.o -MF CMakeFiles/Cifti.dir/src/Cifti/CiftiScalarsMap.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/CiftiScalarsMap.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/CiftiScalarsMap.cxx [ 36%] Building CXX object CMakeFiles/Cifti.dir/src/Cifti/CiftiSeriesMap.cxx.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -DCifti_EXPORTS -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -fPIC -std=gnu++11 -MD -MT CMakeFiles/Cifti.dir/src/Cifti/CiftiSeriesMap.cxx.o -MF CMakeFiles/Cifti.dir/src/Cifti/CiftiSeriesMap.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/CiftiSeriesMap.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/CiftiSeriesMap.cxx +[ 40%] Building CXX object CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o +/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -DCifti_EXPORTS -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -fPIC -std=gnu++11 -MD -MT CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o -MF CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/Label.cxx In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, - from /build/ciftilib-1.6.0/src/Cifti/CiftiParcelsMap.h:31, - from /build/ciftilib-1.6.0/src/Cifti/CiftiParcelsMap.cxx:28: + from /build/ciftilib-1.6.0/src/Cifti/CiftiScalarsMap.h:31, + from /build/ciftilib-1.6.0/src/Cifti/CiftiScalarsMap.cxx:28: /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ @@ -1827,13 +1870,11 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -[ 40%] Building CXX object CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o -/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -DCifti_EXPORTS -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -fPIC -std=gnu++11 -MD -MT CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o -MF CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o.d -o CMakeFiles/Cifti.dir/src/Cifti/Label.cxx.o -c /build/ciftilib-1.6.0/src/Cifti/Label.cxx In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, - from /build/ciftilib-1.6.0/src/Cifti/CiftiScalarsMap.h:31, - from /build/ciftilib-1.6.0/src/Cifti/CiftiScalarsMap.cxx:28: + from /build/ciftilib-1.6.0/src/Cifti/CiftiParcelsMap.h:31, + from /build/ciftilib-1.6.0/src/Cifti/CiftiParcelsMap.cxx:28: /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ @@ -2142,37 +2183,28 @@ [ 80%] Built target Cifti make -f example/CMakeFiles/rewrite.dir/build.make example/CMakeFiles/rewrite.dir/depend make -f example/CMakeFiles/xmlinfo.dir/build.make example/CMakeFiles/xmlinfo.dir/depend -make -f example/CMakeFiles/datatype.dir/build.make example/CMakeFiles/datatype.dir/depend make[3]: Entering directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ciftilib-1.6.0 /build/ciftilib-1.6.0/example /build/ciftilib-1.6.0/obj-aarch64-linux-gnu /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/CMakeFiles/rewrite.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ciftilib-1.6.0 /build/ciftilib-1.6.0/example /build/ciftilib-1.6.0/obj-aarch64-linux-gnu /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/CMakeFiles/xmlinfo.dir/DependInfo.cmake --color= +make -f example/CMakeFiles/datatype.dir/build.make example/CMakeFiles/datatype.dir/depend make[3]: Entering directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ciftilib-1.6.0 /build/ciftilib-1.6.0/example /build/ciftilib-1.6.0/obj-aarch64-linux-gnu /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/CMakeFiles/datatype.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' -make -f example/CMakeFiles/rewrite.dir/build.make example/CMakeFiles/rewrite.dir/build -make -f example/CMakeFiles/xmlinfo.dir/build.make example/CMakeFiles/xmlinfo.dir/build make -f example/CMakeFiles/datatype.dir/build.make example/CMakeFiles/datatype.dir/build make[3]: Entering directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' +make -f example/CMakeFiles/xmlinfo.dir/build.make example/CMakeFiles/xmlinfo.dir/build +make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' +make -f example/CMakeFiles/rewrite.dir/build.make example/CMakeFiles/rewrite.dir/build make[3]: Entering directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' -[ 90%] Building CXX object example/CMakeFiles/rewrite.dir/rewrite.cxx.o -[ 90%] Building CXX object example/CMakeFiles/xmlinfo.dir/xmlinfo.cxx.o -[ 90%] Building CXX object example/CMakeFiles/datatype.dir/datatype.cxx.o +[ 83%] Building CXX object example/CMakeFiles/datatype.dir/datatype.cxx.o +cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/example -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -std=gnu++11 -MD -MT example/CMakeFiles/datatype.dir/datatype.cxx.o -MF CMakeFiles/datatype.dir/datatype.cxx.o.d -o CMakeFiles/datatype.dir/datatype.cxx.o -c /build/ciftilib-1.6.0/example/datatype.cxx +[ 86%] Building CXX object example/CMakeFiles/xmlinfo.dir/xmlinfo.cxx.o cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/example -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -std=gnu++11 -MD -MT example/CMakeFiles/xmlinfo.dir/xmlinfo.cxx.o -MF CMakeFiles/xmlinfo.dir/xmlinfo.cxx.o.d -o CMakeFiles/xmlinfo.dir/xmlinfo.cxx.o -c /build/ciftilib-1.6.0/example/xmlinfo.cxx +[ 90%] Building CXX object example/CMakeFiles/rewrite.dir/rewrite.cxx.o cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/example -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -std=gnu++11 -MD -MT example/CMakeFiles/rewrite.dir/rewrite.cxx.o -MF CMakeFiles/rewrite.dir/rewrite.cxx.o.d -o CMakeFiles/rewrite.dir/rewrite.cxx.o -c /build/ciftilib-1.6.0/example/rewrite.cxx -cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DCIFTILIB_BOOST_NO_CANONICAL -DCIFTILIB_BOOST_NO_FSV3 -DCIFTILIB_BOOST_NO_TRY_LEXICAL -DCIFTILIB_HAVE_ZLIB -DCIFTILIB_USE_XMLPP -I/usr/include/libxml++-2.6 -I/usr/lib/aarch64-linux-gnu/libxml++-2.6/include -I/usr/include/glibmm-2.4 -I/usr/lib/aarch64-linux-gnu/glibmm-2.4/include -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sigc++-2.0 -I/usr/lib/aarch64-linux-gnu/sigc++-2.0/include -I/usr/include/libxml2 -I/build/ciftilib-1.6.0/example -I/build/ciftilib-1.6.0/src -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -std=gnu++11 -MD -MT example/CMakeFiles/datatype.dir/datatype.cxx.o -MF CMakeFiles/datatype.dir/datatype.cxx.o.d -o CMakeFiles/datatype.dir/datatype.cxx.o -c /build/ciftilib-1.6.0/example/datatype.cxx -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, - from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, - from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, - from /build/ciftilib-1.6.0/src/Cifti/CiftiXML.h:31, - from /build/ciftilib-1.6.0/src/CiftiFile.h:34, - from /build/ciftilib-1.6.0/example/datatype.cxx:1: -/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; - | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, @@ -2187,15 +2219,6 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/c++/12/memory:76, - from /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:14: -/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here - 64 | template class auto_ptr; - | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54: -/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 260 | std::auto_ptr propertyreader; - | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54: /usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 260 | std::auto_ptr propertyreader; @@ -2203,54 +2226,72 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here - 64 | template class auto_ptr; - | ^~~~~~~~ In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69: /usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 108 | std::auto_ptr pimpl_; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69: -/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 108 | std::auto_ptr pimpl_; +/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here + 64 | template class auto_ptr; + | ^~~~~~~~ +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70: +/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 99 | std::auto_ptr pimpl_; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73: +/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 159 | std::auto_ptr pimpl_; + | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70: -/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 99 | std::auto_ptr pimpl_; +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75: +/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 149 | std::auto_ptr pimpl_; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70: -/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 99 | std::auto_ptr pimpl_; +/usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here + 64 | template class auto_ptr; + | ^~~~~~~~ +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53, + from /build/ciftilib-1.6.0/src/Common/XmlAdapter.h:54, + from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, + from /build/ciftilib-1.6.0/src/Cifti/CiftiXML.h:31, + from /build/ciftilib-1.6.0/src/CiftiFile.h:34, + from /build/ciftilib-1.6.0/example/xmlinfo.cxx:1: +/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ +In file included from /usr/include/c++/12/memory:76, + from /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:14: /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54: +/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 260 | std::auto_ptr propertyreader; + | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73: -/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 159 | std::auto_ptr pimpl_; +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69: +/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 108 | std::auto_ptr pimpl_; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73: -/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 159 | std::auto_ptr pimpl_; +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70: +/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 99 | std::auto_ptr pimpl_; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75: -/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] - 149 | std::auto_ptr pimpl_; +In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73: +/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] + 159 | std::auto_ptr pimpl_; | ^~~~~~~~ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; @@ -2267,7 +2308,7 @@ from /build/ciftilib-1.6.0/src/Cifti/CiftiMappingType.h:33, from /build/ciftilib-1.6.0/src/Cifti/CiftiXML.h:31, from /build/ciftilib-1.6.0/src/CiftiFile.h:34, - from /build/ciftilib-1.6.0/example/xmlinfo.cxx:1: + from /build/ciftilib-1.6.0/example/datatype.cxx:1: /usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: 'template class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 224 | std::auto_ptr<_xmlSAXHandler> sax_handler_; | ^~~~~~~~ @@ -2311,18 +2352,18 @@ /usr/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ -[ 93%] Linking CXX executable datatype -cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/cmake -E cmake_link_script CMakeFiles/datatype.dir/link.txt --verbose=1 -/usr/bin/c++ -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/datatype.dir/datatype.cxx.o -o datatype -Wl,-rpath,/build/ciftilib-1.6.0/obj-aarch64-linux-gnu ../libCifti.so.1.5 -lxml++-2.6 -lglibmm-2.4 -lglib-2.0 -lsigc-2.0 -lxml2 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.74.0 -lz -make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' -[ 93%] Built target datatype -[ 96%] Linking CXX executable rewrite +[ 93%] Linking CXX executable rewrite cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/cmake -E cmake_link_script CMakeFiles/rewrite.dir/link.txt --verbose=1 /usr/bin/c++ -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/rewrite.dir/rewrite.cxx.o -o rewrite -Wl,-rpath,/build/ciftilib-1.6.0/obj-aarch64-linux-gnu ../libCifti.so.1.5 -lxml++-2.6 -lglibmm-2.4 -lglib-2.0 -lsigc-2.0 -lxml2 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.74.0 -lz +[ 96%] Linking CXX executable datatype +cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/cmake -E cmake_link_script CMakeFiles/datatype.dir/link.txt --verbose=1 +/usr/bin/c++ -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/datatype.dir/datatype.cxx.o -o datatype -Wl,-rpath,/build/ciftilib-1.6.0/obj-aarch64-linux-gnu ../libCifti.so.1.5 -lxml++-2.6 -lglibmm-2.4 -lglib-2.0 -lsigc-2.0 -lxml2 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.74.0 -lz make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' [ 96%] Built target rewrite +make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' [100%] Linking CXX executable xmlinfo cd /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlinfo.dir/link.txt --verbose=1 +[100%] Built target datatype /usr/bin/c++ -fopenmp -g -O2 -ffile-prefix-map=/build/ciftilib-1.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/xmlinfo.dir/xmlinfo.cxx.o -o xmlinfo -Wl,-rpath,/build/ciftilib-1.6.0/obj-aarch64-linux-gnu ../libCifti.so.1.5 -lxml++-2.6 -lglibmm-2.4 -lglib-2.0 -lsigc-2.0 -lxml2 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.74.0 -lz make[3]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' [100%] Built target xmlinfo @@ -2359,49 +2400,49 @@ 1: Surface CORTEX_LEFT: 30424 out of 32492 vertices 1: Surface CORTEX_RIGHT: 30527 out of 32492 vertices 1: - 1/35 Test #1: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .................. Passed 0.23 sec + 1/35 Test #1: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .................. Passed 0.28 sec test 2 Start 2: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii 2: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "LITTLE" 2: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 2: Test timeout computed to be: 10000000 - 2/35 Test #2: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii ........ Passed 0.44 sec + 2/35 Test #2: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii ........ Passed 0.49 sec test 3 Start 3: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii 3: Test command: /usr/bin/cmake "-Dgood_sum=39ecfba4c1dade1a2ce3e95b325bd8b1" "-Dcheck_file=little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 3: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 3: Test timeout computed to be: 10000000 - 3/35 Test #3: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .... Passed 0.03 sec + 3/35 Test #3: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .... Passed 0.07 sec test 4 Start 4: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii 4: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "BIG" 4: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 4: Test timeout computed to be: 10000000 - 4/35 Test #4: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii ........... Passed 0.45 sec + 4/35 Test #4: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii ........... Passed 0.50 sec test 6 Start 6: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii 6: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/datatype "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" 6: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 6: Test timeout computed to be: 10000000 - 5/35 Test #6: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .............. Passed 0.49 sec + 5/35 Test #6: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .............. Passed 0.56 sec test 5 Start 5: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii 5: Test command: /usr/bin/cmake "-Dgood_sum=a2581f76a94b7c4371d6970f1262e1bc" "-Dcheck_file=big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 5: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 5: Test timeout computed to be: 10000000 - 6/35 Test #5: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii ....... Passed 0.03 sec + 6/35 Test #5: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii ....... Passed 0.05 sec test 7 Start 7: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii 7: Test command: /usr/bin/cmake "-Dgood_sum=6db4a73e4e11a1ac0a5e7cbfb56eff40" "-Dcheck_file=datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 7: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 7: Test timeout computed to be: 10000000 - 7/35 Test #7: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .......... Passed 0.03 sec + 7/35 Test #7: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii .......... Passed 0.04 sec test 8 Start 8: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii @@ -2417,49 +2458,49 @@ 8: Surface CORTEX_LEFT: 30424 out of 32492 vertices 8: Surface CORTEX_RIGHT: 30527 out of 32492 vertices 8: - 8/35 Test #8: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ................. Passed 0.23 sec + 8/35 Test #8: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ................. Passed 0.26 sec test 9 Start 9: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii 9: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "LITTLE" 9: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 9: Test timeout computed to be: 10000000 - 9/35 Test #9: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ....... Passed 0.45 sec + 9/35 Test #9: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ....... Passed 0.49 sec test 10 Start 10: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii 10: Test command: /usr/bin/cmake "-Dgood_sum=921a42e4181052ef4f211d389a2e9328" "-Dcheck_file=little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 10: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 10: Test timeout computed to be: 10000000 -10/35 Test #10: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ... Passed 0.03 sec +10/35 Test #10: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ... Passed 0.04 sec test 11 Start 11: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii 11: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "BIG" 11: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 11: Test timeout computed to be: 10000000 -11/35 Test #11: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii .......... Passed 0.45 sec +11/35 Test #11: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii .......... Passed 0.48 sec test 13 Start 13: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii 13: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/datatype "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" 13: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 13: Test timeout computed to be: 10000000 -12/35 Test #13: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ............. Passed 0.49 sec +12/35 Test #13: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ............. Passed 0.52 sec test 12 Start 12: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii 12: Test command: /usr/bin/cmake "-Dgood_sum=ca4cfb02fb7f0d8f167f546aab85e91d" "-Dcheck_file=big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 12: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 12: Test timeout computed to be: 10000000 -13/35 Test #12: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ...... Passed 0.03 sec +13/35 Test #12: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ...... Passed 0.04 sec test 14 Start 14: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii 14: Test command: /usr/bin/cmake "-Dgood_sum=f321156573ed8f165b208d84769bfd9a" "-Dcheck_file=datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 14: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 14: Test timeout computed to be: 10000000 -14/35 Test #14: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ......... Passed 0.03 sec +14/35 Test #14: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii ......... Passed 0.04 sec test 15 Start 15: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii @@ -2527,49 +2568,49 @@ 15: Index 52, name 'ER_FRB08': 206 vertices, 0 voxels 15: Index 53, name '13b_OFP03': 131 vertices, 0 voxels 15: -15/35 Test #15: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ................. Passed 0.13 sec +15/35 Test #15: info-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ................. Passed 0.16 sec test 16 Start 16: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii 16: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "little-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "LITTLE" 16: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 16: Test timeout computed to be: 10000000 -16/35 Test #16: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ....... Passed 0.18 sec +16/35 Test #16: rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ....... Passed 0.24 sec test 17 Start 17: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii 17: Test command: /usr/bin/cmake "-Dgood_sum=764c816004ebe23d188d98f9f29c7337" "-Dcheck_file=little-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 17: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 17: Test timeout computed to be: 10000000 -17/35 Test #17: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ... Passed 0.03 sec +17/35 Test #17: rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ... Passed 0.05 sec test 18 Start 18: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii 18: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "big-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "BIG" 18: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 18: Test timeout computed to be: 10000000 -18/35 Test #18: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii .......... Passed 0.19 sec +18/35 Test #18: rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii .......... Passed 0.25 sec test 20 Start 20: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii 20: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/datatype "/build/ciftilib-1.6.0/example/data/Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" 20: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 20: Test timeout computed to be: 10000000 -19/35 Test #20: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ............. Passed 0.18 sec +19/35 Test #20: datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ............. Passed 0.24 sec test 19 Start 19: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii 19: Test command: /usr/bin/cmake "-Dgood_sum=892c26e691fe62c4edf358f7f91942a3" "-Dcheck_file=big-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 19: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 19: Test timeout computed to be: 10000000 -20/35 Test #19: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ...... Passed 0.03 sec +20/35 Test #19: rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ...... Passed 0.05 sec test 21 Start 21: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii 21: Test command: /usr/bin/cmake "-Dgood_sum=794d60d9d397fe341e18313efeeac5ea" "-Dcheck_file=datatype-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 21: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 21: Test timeout computed to be: 10000000 -21/35 Test #21: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ......... Passed 0.02 sec +21/35 Test #21: datatype-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii ......... Passed 0.04 sec test 22 Start 22: info-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii @@ -2585,49 +2626,49 @@ 22: Surface CORTEX_LEFT: 32492 out of 32492 vertices 22: Surface CORTEX_RIGHT: 32492 out of 32492 vertices 22: -22/35 Test #22: info-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ..................... Passed 0.33 sec +22/35 Test #22: info-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ..................... Passed 0.43 sec test 23 Start 23: rewrite-little-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii 23: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "little-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "LITTLE" 23: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 23: Test timeout computed to be: 10000000 -23/35 Test #23: rewrite-little-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ........... Passed 0.60 sec +23/35 Test #23: rewrite-little-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ........... Passed 0.66 sec test 24 Start 24: rewrite-little-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii 24: Test command: /usr/bin/cmake "-Dgood_sum=6fabac021e377efd35dede7198feefd4" "-Dcheck_file=little-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 24: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 24: Test timeout computed to be: 10000000 -24/35 Test #24: rewrite-little-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ....... Passed 0.03 sec +24/35 Test #24: rewrite-little-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ....... Passed 0.06 sec test 25 Start 25: rewrite-big-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii 25: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "big-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "BIG" 25: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 25: Test timeout computed to be: 10000000 -25/35 Test #25: rewrite-big-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii .............. Passed 0.60 sec +25/35 Test #25: rewrite-big-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii .............. Passed 0.66 sec test 27 Start 27: datatype-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii 27: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/datatype "/build/ciftilib-1.6.0/example/data/Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "datatype-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" 27: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 27: Test timeout computed to be: 10000000 -26/35 Test #27: datatype-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ................. Passed 0.65 sec +26/35 Test #27: datatype-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ................. Passed 0.69 sec test 26 Start 26: rewrite-big-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii 26: Test command: /usr/bin/cmake "-Dgood_sum=e761d405c945e724b37f96e356dc19ad" "-Dcheck_file=big-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 26: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 26: Test timeout computed to be: 10000000 -27/35 Test #26: rewrite-big-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii .......... Passed 0.03 sec +27/35 Test #26: rewrite-big-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii .......... Passed 0.04 sec test 28 Start 28: datatype-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii 28: Test command: /usr/bin/cmake "-Dgood_sum=ea43725139bd3e152197fdf22c5e72e7" "-Dcheck_file=datatype-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 28: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 28: Test timeout computed to be: 10000000 -28/35 Test #28: datatype-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ............. Passed 0.03 sec +28/35 Test #28: datatype-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii ............. Passed 0.04 sec test 29 Start 29: info-ones.dscalar.nii @@ -2660,53 +2701,53 @@ 29: Voxels THALAMUS_LEFT: 1288 voxels 29: Voxels THALAMUS_RIGHT: 1248 voxels 29: -29/35 Test #29: info-ones.dscalar.nii ...................................................... Passed 0.59 sec +29/35 Test #29: info-ones.dscalar.nii ...................................................... Passed 0.68 sec test 30 Start 30: rewrite-little-ones.dscalar.nii 30: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/ones.dscalar.nii" "little-ones.dscalar.nii" "LITTLE" 30: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 30: Test timeout computed to be: 10000000 -30/35 Test #30: rewrite-little-ones.dscalar.nii ............................................ Passed 0.97 sec +30/35 Test #30: rewrite-little-ones.dscalar.nii ............................................ Passed 1.09 sec test 31 Start 31: rewrite-little-md5-ones.dscalar.nii 31: Test command: /usr/bin/cmake "-Dgood_sum=fe0cbb768e26aa12a0e03990f4f50a30" "-Dcheck_file=little-ones.dscalar.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 31: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 31: Test timeout computed to be: 10000000 -31/35 Test #31: rewrite-little-md5-ones.dscalar.nii ........................................ Passed 0.03 sec +31/35 Test #31: rewrite-little-md5-ones.dscalar.nii ........................................ Passed 0.04 sec test 32 Start 32: rewrite-big-ones.dscalar.nii 32: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/rewrite "/build/ciftilib-1.6.0/example/data/ones.dscalar.nii" "big-ones.dscalar.nii" "BIG" 32: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 32: Test timeout computed to be: 10000000 -32/35 Test #32: rewrite-big-ones.dscalar.nii ............................................... Passed 0.98 sec +32/35 Test #32: rewrite-big-ones.dscalar.nii ............................................... Passed 1.09 sec test 34 Start 34: datatype-ones.dscalar.nii 34: Test command: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example/datatype "/build/ciftilib-1.6.0/example/data/ones.dscalar.nii" "datatype-ones.dscalar.nii" 34: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 34: Test timeout computed to be: 10000000 -33/35 Test #34: datatype-ones.dscalar.nii .................................................. Passed 1.00 sec +33/35 Test #34: datatype-ones.dscalar.nii .................................................. Passed 1.12 sec test 33 Start 33: rewrite-big-md5-ones.dscalar.nii 33: Test command: /usr/bin/cmake "-Dgood_sum=2e4efa4e36cdb13f514c265e6c9c8c4b" "-Dcheck_file=big-ones.dscalar.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 33: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 33: Test timeout computed to be: 10000000 -34/35 Test #33: rewrite-big-md5-ones.dscalar.nii ........................................... Passed 0.03 sec +34/35 Test #33: rewrite-big-md5-ones.dscalar.nii ........................................... Passed 0.04 sec test 35 Start 35: datatype-md5-ones.dscalar.nii 35: Test command: /usr/bin/cmake "-Dgood_sum=4dbb23ab2564ba8c9f242a3cb6036600" "-Dcheck_file=datatype-ones.dscalar.nii" "-P" "/build/ciftilib-1.6.0/cmake/scripts/testmd5.cmake" 35: Working Directory: /build/ciftilib-1.6.0/obj-aarch64-linux-gnu/example 35: Test timeout computed to be: 10000000 -35/35 Test #35: datatype-md5-ones.dscalar.nii .............................................. Passed 0.03 sec +35/35 Test #35: datatype-md5-ones.dscalar.nii .............................................. Passed 0.04 sec 100% tests passed, 0 tests failed out of 35 -Total Test time (real) = 10.06 sec +Total Test time (real) = 11.62 sec make[2]: Leaving directory '/build/ciftilib-1.6.0/obj-aarch64-linux-gnu' make[1]: Leaving directory '/build/ciftilib-1.6.0' debian/rules override_dh_auto_test-indep @@ -2806,9 +2847,9 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'libcifti0-dbgsym' in '../libcifti0-dbgsym_1.6.0-2_arm64.deb'. dpkg-deb: building package 'libcifti0' in '../libcifti0_1.6.0-2_arm64.deb'. dpkg-deb: building package 'libcifti-doc' in '../libcifti-doc_1.6.0-2_all.deb'. +dpkg-deb: building package 'libcifti0-dbgsym' in '../libcifti0-dbgsym_1.6.0-2_arm64.deb'. dpkg-deb: building package 'libcifti-dev' in '../libcifti-dev_1.6.0-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ciftilib_1.6.0-2_arm64.buildinfo dpkg-genchanges --build=binary -O../ciftilib_1.6.0-2_arm64.changes @@ -2817,12 +2858,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/25617/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/24619 and its subdirectories -I: Current time: Sun Apr 16 07:46:30 -12 2023 -I: pbuilder-time-stamp: 1681674390 +I: removing directory /srv/workspace/pbuilder/25617 and its subdirectories +I: Current time: Sun May 19 16:12:52 +14 2024 +I: pbuilder-time-stamp: 1716084772