Diff of the two buildlogs: -- --- b1/build.log 2024-01-09 01:02:13.768913792 +0000 +++ b2/build.log 2024-01-09 02:02:14.762297937 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Feb 9 19:13:24 -12 2025 -I: pbuilder-time-stamp: 1739171604 +I: Current time: Tue Jan 9 15:02:21 +14 2024 +I: pbuilder-time-stamp: 1704762141 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -28,49 +28,81 @@ dpkg-source: info: applying 10_fix_gcc-11_FTBFS.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3093612/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 9 01:03 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='911d7c65e6bb4d42adf8d01bbeec5806' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3093612' - PS1='# ' - PS2='> ' + INVOCATION_ID=7823bbd13d8f4dd8ab8f1ce1dc8f4ccc + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2688375 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.sVJqzKqH/pbuilderrc_opSt --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.sVJqzKqH/b1 --logfile b1/build.log liggghts_3.8.0+repack1-9.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.sVJqzKqH/pbuilderrc_OpYA --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.sVJqzKqH/b2 --logfile b2/build.log liggghts_3.8.0+repack1-9.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos5-amd64 6.5.0-0.deb12.4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.5.10-1~bpo12+1 (2023-11-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash @@ -128,15 +160,15 @@ -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Jul 28 2023 run-parts + -rwxr-xr-x 1 root root 27560 Jul 28 23:46 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 9 01:03 sh -> /bin/bash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 23 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar - -rwxr-xr-x 1 root root 14520 Jul 28 2023 tempfile + -rwxr-xr-x 1 root root 14520 Jul 28 23:46 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 23 2023 ulockmgr_server @@ -156,7 +188,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/3093612/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -721,7 +753,7 @@ Get: 513 http://deb.debian.org/debian bookworm/main amd64 tk-dev amd64 8.6.13 [3884 B] Get: 514 http://deb.debian.org/debian bookworm/main amd64 vtk9 amd64 9.1.0+really9.1.0+dfsg2-5 [17.6 kB] Get: 515 http://deb.debian.org/debian bookworm/main amd64 libvtk9-dev amd64 9.1.0+really9.1.0+dfsg2-5 [2731 kB] -Fetched 439 MB in 18s (24.3 MB/s) +Fetched 439 MB in 31s (14.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18148 files and directories currently installed.) @@ -2359,8 +2391,8 @@ Setting up tzdata (2023c-5+deb12u1) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Feb 10 07:15:02 UTC 2025. -Universal Time is now: Mon Feb 10 07:15:02 UTC 2025. +Local time is now: Tue Jan 9 01:12:50 UTC 2024. +Universal Time is now: Tue Jan 9 01:12:50 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up mariadb-common (1:10.11.4-1~deb12u1) ... @@ -3005,7 +3037,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-9_source.changes +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bookworm +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-9_source.changes dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-9 dpkg-buildpackage: info: source distribution unstable @@ -3065,7 +3101,7 @@ -- Build files have been written to: /build/reproducible-path/liggghts-3.8.0+repack1/debian/build dh_auto_build -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd debian/build && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/reproducible-path/liggghts-3.8.0+repack1/debian/build//CMakeFiles/progress.marks @@ -3093,35 +3129,35 @@ make[3]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/angle.cpp.o -MF CMakeFiles/libliggghts.dir/angle.cpp.o.d -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom.cpp.o -MF CMakeFiles/libliggghts.dir/atom.cpp.o.d -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -MF CMakeFiles/libliggghts.dir/atom_map.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp +[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec.cpp +[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o 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src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_full.cpp -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere.cpp +[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp @@ -3145,6 +3181,13 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o -MF CMakeFiles/libliggghts.dir/bounding_box.cpp.o.d -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 200 | fread(&k[1],sizeof(double),atom->nbondtypes,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 201 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o @@ -3153,16 +3196,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:360:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 360 | if (me == 0) fread(&n,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/change_box.cpp.o -MF CMakeFiles/libliggghts.dir/change_box.cpp.o.d -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o @@ -3171,13 +3204,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/comm.cpp.o -MF CMakeFiles/libliggghts.dir/comm.cpp.o.d -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute.cpp.o -MF CMakeFiles/libliggghts.dir/compute.cpp.o.d -o CMakeFiles/libliggghts.dir/compute.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 200 | fread(&k[1],sizeof(double),atom->nbondtypes,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 201 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_atom_molecule.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o @@ -3187,8 +3213,8 @@ [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_cluster_atom.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o -[ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_cna_atom.cpp +[ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_com.cpp.o -MF CMakeFiles/libliggghts.dir/compute_com.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_com.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_com.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_com_molecule.cpp @@ -3196,6 +3222,16 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_contact_atom.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -MF CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_contact_atom_gran.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:360:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 360 | if (me == 0) fread(&n,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_coord_atom.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o @@ -3223,15 +3259,15 @@ [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_atom.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_atom.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_multisphere.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_msd.cpp.o -MF CMakeFiles/libliggghts.dir/compute_msd.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_msd.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_msd.cpp -[ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_msd_molecule.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -MF CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_nparticles_tracer_region.cpp +[ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_msd_molecule.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o -MF CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_pair_gran_local.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pe.cpp.o @@ -3242,20 +3278,20 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_pressure.cpp.o -MF CMakeFiles/libliggghts.dir/compute_pressure.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_pressure.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_pressure.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_atom.cpp -[ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -MF CMakeFiles/libliggghts.dir/compute_property_local.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_local.cpp +[ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -MF CMakeFiles/libliggghts.dir/compute_rdf.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rdf.cpp -[ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -MF CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -MF CMakeFiles/libliggghts.dir/compute_reduce.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce.cpp +[ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -MF CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp +[ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o -MF CMakeFiles/libliggghts.dir/compute_slice.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_slice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_slice.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rigid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -MF CMakeFiles/libliggghts.dir/compute_rigid.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rigid.cpp -[ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o -MF CMakeFiles/libliggghts.dir/compute_slice.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_slice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_slice.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_stress_atom.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_temp.cpp.o @@ -3272,10 +3308,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o -MF CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o.d -o CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/custom_value_tracker.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_atoms.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/delete_atoms.cpp.o -MF CMakeFiles/libliggghts.dir/delete_atoms.cpp.o.d -o CMakeFiles/libliggghts.dir/delete_atoms.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/delete_atoms.cpp +[ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral.cpp.o [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -MF CMakeFiles/libliggghts.dir/delete_bonds.cpp.o.d -o CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/delete_bonds.cpp -[ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dihedral.cpp.o -MF CMakeFiles/libliggghts.dir/dihedral.cpp.o.d -o CMakeFiles/libliggghts.dir/dihedral.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -MF CMakeFiles/libliggghts.dir/delete_bonds.cpp.o.d -o CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/delete_bonds.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o @@ -3299,11 +3335,7 @@ [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_image.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_image.cpp.o -MF CMakeFiles/libliggghts.dir/dump_image.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_image.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_image.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local.cpp.o -[ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local_gran.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp -[ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local_gran_vtk.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3314,18 +3346,23 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 364 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp: In constructor 'LAMMPS_NS::DumpCustom::DumpCustom(LAMMPS_NS::LAMMPS*, int, char**)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:180:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] + 180 | columns[0] = '\0'; + | ~~~~~~~~~~~^~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:179:23: note: destination object of size 0 allocated by 'operator new []' + 179 | columns = new char[n]; + | ^ +[ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local_gran.cpp +[ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local_gran_vtk.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o -[ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh_stl.cpp +[ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh_vtk.cpp -[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x 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-Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_movie.cpp.o -MF CMakeFiles/libliggghts.dir/dump_movie.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_movie.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_movie.cpp -[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o -MF CMakeFiles/libliggghts.dir/dump_particle.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_particle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_particle.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp: In constructor 'LAMMPS_NS::DumpLocal::DumpLocal(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp:120:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 120 | columns[0] = '\0'; @@ -3333,9 +3370,15 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp:119:23: note: destination object of size 0 allocated by 'operator new []' 119 | columns = new char[n]; | ^ +[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh_vtm.cpp +[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_movie.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_movie.cpp.o -MF CMakeFiles/libliggghts.dir/dump_movie.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_movie.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_movie.cpp +[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o -MF CMakeFiles/libliggghts.dir/dump_particle.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_particle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_particle.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_vtk.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_xyz.cpp.o -MF CMakeFiles/libliggghts.dir/dump_xyz.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_xyz.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_xyz.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/error.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/error.cpp.o -MF CMakeFiles/libliggghts.dir/error.cpp.o.d -o CMakeFiles/libliggghts.dir/error.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/error.cpp @@ -3353,61 +3396,75 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_euler.cpp +[ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp -[ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp: In constructor 'LAMMPS_NS::DumpCustom::DumpCustom(LAMMPS_NS::LAMMPS*, int, char**)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:180:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] - 180 | columns[0] = '\0'; - | ~~~~~~~~~~~^~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:179:23: note: destination object of size 0 allocated by 'operator new []' - 179 | columns = new char[n]; - | ^ [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -MF CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 520 | ftruncate(fileno(fp),fileend); - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp: In member function 'virtual void LAMMPS_NS::FixAveSpatial::end_of_step()': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 917 | ftruncate(fileno(fp),fileend); +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 670 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -MF CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_box_relax.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 848 | ftruncate(fileno(fp),fileend); - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -MF CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 670 | ftruncate(fileno(fp),fileend); +[ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 520 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 848 | ftruncate(fileno(fp),fileend); + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_impl.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp: In member function 'virtual void LAMMPS_NS::FixAveSpatial::end_of_step()': +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 917 | ftruncate(fileno(fp),fileend); + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o -MF CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force_implicit.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -MF CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_gran.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -MF CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_gran.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -MF CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63: warning: "BIG" redefined + 63 | #define BIG 1000000. + | +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/surface_mesh.h:54, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/tri_mesh.h:47, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_mesh_surface.h:56, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_wall_gran.h:53, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:52: +/build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition + 60 | #define BIG 1.0e20 + | +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp +[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -MF CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor 'LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:40: warning: 'Source' directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 75 | sprintf(sourceName_, "%sSource",speciesName_); @@ -3504,33 +3561,12 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63: warning: "BIG" redefined - 63 | #define BIG 1000000. - | -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/surface_mesh.h:54, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/tri_mesh.h:47, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_mesh_surface.h:56, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_wall_gran.h:53, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:52: -/build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition - 60 | #define BIG 1.0e20 - | -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp -[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -MF CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o -MF CMakeFiles/libliggghts.dir/fix_deform.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform.cpp -[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -MF CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform_check.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -MF CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_diam_max.cpp +[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -MF CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform_check.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_drag.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_drag.cpp.o -MF CMakeFiles/libliggghts.dir/fix_drag.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_drag.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_drag.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_dt_reset.cpp.o @@ -3543,18 +3579,18 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_external.cpp.o -MF CMakeFiles/libliggghts.dir/fix_external.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_external.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_external.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o -MF CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_fiber_spring_simple.cpp -[ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -MF CMakeFiles/libliggghts.dir/fix_gravity.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_gravity.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_freeze.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_freeze.cpp.o -MF CMakeFiles/libliggghts.dir/fix_freeze.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_freeze.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_freeze.cpp +[ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -MF CMakeFiles/libliggghts.dir/fix_gravity.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_gravity.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -MF CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_heat_gran.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o -MF CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_heat_gran_conduction.cpp -[ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_insert.cpp.o -MF CMakeFiles/libliggghts.dir/fix_insert.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_insert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o -MF CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert_pack.cpp +[ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_insert.cpp.o -MF CMakeFiles/libliggghts.dir/fix_insert.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_insert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o -MF CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert_rate_region.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o @@ -3563,10 +3599,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o -MF CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_lb_coupling_onetoone.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_lineforce.cpp -[ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o -MF CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_massflow_mesh_sieve.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_massflow_mesh.cpp +[ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o -MF CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_massflow_mesh_sieve.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_mesh.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_mesh.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o @@ -3622,8 +3658,8 @@ [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o -MF CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_atom_region_tracer.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o -[ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o -MF CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_atom_tracer.cpp +[ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o -MF CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_atom_tracer_stream.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_global.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_property_global.cpp.o -MF CMakeFiles/libliggghts.dir/fix_property_global.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_property_global.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_global.cpp @@ -3658,9 +3694,9 @@ [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_store.cpp.o -MF CMakeFiles/libliggghts.dir/fix_store.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_store.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_store.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store_force.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_store_force.cpp.o -MF CMakeFiles/libliggghts.dir/fix_store_force.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_store_force.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_store_force.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store_state.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_store_state.cpp.o -MF CMakeFiles/libliggghts.dir/fix_store_state.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_store_state.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_store_state.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_store_force.cpp.o -MF CMakeFiles/libliggghts.dir/fix_store_force.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_store_force.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_store_force.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o -MF CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_template_multiplespheres.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_multisphere.cpp.o @@ -3701,28 +3737,18 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/info.cpp.o -MF CMakeFiles/libliggghts.dir/info.cpp.o.d -o CMakeFiles/libliggghts.dir/info.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input.cpp.o -MF CMakeFiles/libliggghts.dir/input.cpp.o.d -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp: In member function 'void LAMMPS_NS::Input::shell()': +/build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 1124 | chdir(arg[1]); + | ~~~~~^~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 1170 | if (me == 0) system(work); + | ~~~~~~^~~~~~ [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:569:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 569 | if (me == 0) fread(&ngroup,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:581:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 581 | if (me == 0) fread(&n,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:585:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 585 | if (me == 0) fread(names[i],sizeof(char),n,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/input_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/integrate.cpp.o -MF CMakeFiles/libliggghts.dir/integrate.cpp.o.d -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/irregular.cpp.o -MF CMakeFiles/libliggghts.dir/irregular.cpp.o.d -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp -[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/kspace.cpp.o -MF CMakeFiles/libliggghts.dir/kspace.cpp.o.d -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp: In member function 'void LAMMPS_NS::Info::command(int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp:260:18: warning: 'mallinfo mallinfo()' is deprecated [-Wdeprecated-declarations] 260 | mi = mallinfo(); @@ -3731,12 +3757,15 @@ /usr/include/malloc.h:114:24: note: declared here 114 | extern struct mallinfo mallinfo (void) __THROW __MALLOC_DEPRECATED; | ^~~~~~~~ +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/input_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/integrate.cpp.o -MF CMakeFiles/libliggghts.dir/integrate.cpp.o.d -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/irregular.cpp.o -MF CMakeFiles/libliggghts.dir/irregular.cpp.o.d -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp +[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/kspace.cpp.o -MF CMakeFiles/libliggghts.dir/kspace.cpp.o.d -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lammps.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/lammps.cpp.o -MF CMakeFiles/libliggghts.dir/lammps.cpp.o.d -o CMakeFiles/libliggghts.dir/lammps.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp -[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/lattice.cpp.o -MF CMakeFiles/libliggghts.dir/lattice.cpp.o.d -o CMakeFiles/libliggghts.dir/lattice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lattice.cpp -[ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/library.cpp.o -MF CMakeFiles/libliggghts.dir/library.cpp.o.d -o CMakeFiles/libliggghts.dir/library.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/library.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3747,25 +3776,32 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/lattice.cpp.o -MF CMakeFiles/libliggghts.dir/lattice.cpp.o.d -o CMakeFiles/libliggghts.dir/lattice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lattice.cpp +[ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/library.cpp.o -MF CMakeFiles/libliggghts.dir/library.cpp.o.d -o CMakeFiles/libliggghts.dir/library.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/library.cpp [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o -MF CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o.d -o CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/library_cfd_coupling.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:569:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 569 | if (me == 0) fread(&ngroup,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:581:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 581 | if (me == 0) fread(&n,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:585:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 585 | if (me == 0) fread(names[i],sizeof(char),n,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/math_extra.cpp.o -MF CMakeFiles/libliggghts.dir/math_extra.cpp.o.d -o CMakeFiles/libliggghts.dir/math_extra.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/math_extra.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp: In member function 'void LAMMPS_NS::Input::shell()': -/build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 1124 | chdir(arg[1]); - | ~~~~~^~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 1170 | if (me == 0) system(work); - | ~~~~~~^~~~~~ [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o -MF CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o.d -o CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/math_extra_liggghts_nonspherical.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/math_extra_liggghts_superquadric.cpp -[ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/memory.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/memory.cpp.o -MF CMakeFiles/libliggghts.dir/memory.cpp.o.d -o CMakeFiles/libliggghts.dir/memory.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/memory.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module.cpp +[ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/memory.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/memory.cpp.o -MF CMakeFiles/libliggghts.dir/memory.cpp.o.d -o CMakeFiles/libliggghts.dir/memory.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/memory.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_liquidtransfer.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o @@ -3799,8 +3835,8 @@ [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/minimize.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/minimize.cpp.o -MF CMakeFiles/libliggghts.dir/minimize.cpp.o.d -o CMakeFiles/libliggghts.dir/minimize.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/minimize.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -MF CMakeFiles/libliggghts.dir/modified_andrew.cpp.o.d -o CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modified_andrew.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -MF CMakeFiles/libliggghts.dir/modified_andrew.cpp.o.d -o CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modified_andrew.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modify.cpp.o -MF CMakeFiles/libliggghts.dir/modify.cpp.o.d -o CMakeFiles/libliggghts.dir/modify.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o -MF CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o.d -o CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/modify_liggghts.cpp @@ -3808,12 +3844,12 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -MF CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o.d -o CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/multisphere_parallel.cpp +[ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_dummy.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_bond.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_bond.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_bond.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_derive.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_derive.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_derive.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_dummy.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_full.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_full.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o @@ -3822,14 +3858,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_multi.cpp -[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_nsq.cpp -[ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_list.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_list.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_list.cpp -[ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_request.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_request.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_request.cpp -[ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_respa.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_respa.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1197 | if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); @@ -3870,6 +3898,14 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1264 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_nsq.cpp +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_respa.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_respa.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_request.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_request.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_request.cpp +[ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_list.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_list.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_list.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_stencil.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neighbor.cpp.o @@ -3880,10 +3916,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair.cpp.o -MF CMakeFiles/libliggghts.dir/pair.cpp.o.d -o CMakeFiles/libliggghts.dir/pair.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o -MF CMakeFiles/libliggghts.dir/pair_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp -[ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -MF CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp +[ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o @@ -3894,6 +3930,27 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o -MF CMakeFiles/libliggghts.dir/pair_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -MF CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsert.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/procmap.cpp.o -MF CMakeFiles/libliggghts.dir/procmap.cpp.o.d -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/properties.cpp.o -MF CMakeFiles/libliggghts.dir/properties.cpp.o.d -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 300 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart_settings(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 322 | fread(&artVisc_flag,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 323 | fread(&tensCorr_flag,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 282 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); @@ -3911,6 +3968,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | fread(&mix_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/property_registry.cpp.o -MF CMakeFiles/libliggghts.dir/property_registry.cpp.o.d -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/property_registry.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:660:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 660 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3921,68 +3980,36 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:677:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 677 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsert.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/procmap.cpp.o -MF CMakeFiles/libliggghts.dir/procmap.cpp.o.d -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/properties.cpp.o -MF CMakeFiles/libliggghts.dir/properties.cpp.o.d -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/property_registry.cpp.o -MF CMakeFiles/libliggghts.dir/property_registry.cpp.o.d -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/property_registry.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 300 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart_settings(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 322 | fread(&artVisc_flag,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 323 | fread(&tensCorr_flag,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/random.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/random.cpp.o -MF CMakeFiles/libliggghts.dir/random.cpp.o.d -o CMakeFiles/libliggghts.dir/random.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_mars.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/random_mars.cpp.o -MF CMakeFiles/libliggghts.dir/random_mars.cpp.o.d -o CMakeFiles/libliggghts.dir/random_mars.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random_mars.cpp -[ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_park.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/random_park.cpp.o -MF CMakeFiles/libliggghts.dir/random_park.cpp.o.d -o CMakeFiles/libliggghts.dir/random_park.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random_park.cpp -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 80 | posix_memalign(&ptr, alignment, sizeof(T)); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] -[ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/read_data.cpp.o /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fread(&selected, sizeof(int64_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_park.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/random_park.cpp.o -MF CMakeFiles/libliggghts.dir/random_park.cpp.o.d -o CMakeFiles/libliggghts.dir/random_park.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random_park.cpp +[ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/read_data.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/read_data.cpp.o -MF CMakeFiles/libliggghts.dir/read_data.cpp.o.d -o CMakeFiles/libliggghts.dir/read_data.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/read_data.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/read_dump.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/read_dump.cpp.o -MF CMakeFiles/libliggghts.dir/read_dump.cpp.o.d -o CMakeFiles/libliggghts.dir/read_dump.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/read_dump.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/read_restart.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/read_restart.cpp.o -MF CMakeFiles/libliggghts.dir/read_restart.cpp.o.d -o CMakeFiles/libliggghts.dir/read_restart.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader.cpp.o -[ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_native.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/reader.cpp.o -MF CMakeFiles/libliggghts.dir/reader.cpp.o.d -o CMakeFiles/libliggghts.dir/reader.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/reader.cpp -[ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_xyz.cpp.o +[ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_native.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/reader_native.cpp.o -MF CMakeFiles/libliggghts.dir/reader_native.cpp.o.d -o CMakeFiles/libliggghts.dir/reader_native.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/reader_native.cpp +[ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_xyz.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/reader_xyz.cpp.o -MF CMakeFiles/libliggghts.dir/reader_xyz.cpp.o.d -o CMakeFiles/libliggghts.dir/reader_xyz.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/reader_xyz.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region.cpp.o -MF CMakeFiles/libliggghts.dir/region.cpp.o.d -o CMakeFiles/libliggghts.dir/region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region_block.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_block.cpp.o -MF CMakeFiles/libliggghts.dir/region_block.cpp.o.d -o CMakeFiles/libliggghts.dir/region_block.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_block.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cone.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_cone.cpp.o -MF CMakeFiles/libliggghts.dir/region_cone.cpp.o.d -o CMakeFiles/libliggghts.dir/region_cone.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_cone.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cylinder.cpp.o @@ -3994,9 +4021,11 @@ [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o -MF CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o.d -o CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_plane.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_plane.cpp.o -MF CMakeFiles/libliggghts.dir/region_plane.cpp.o.d -o CMakeFiles/libliggghts.dir/region_plane.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_plane.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_prism.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_plane.cpp.o -MF CMakeFiles/libliggghts.dir/region_plane.cpp.o.d -o CMakeFiles/libliggghts.dir/region_plane.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_plane.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_prism.cpp.o -MF CMakeFiles/libliggghts.dir/region_prism.cpp.o.d -o CMakeFiles/libliggghts.dir/region_prism.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_prism.cpp +[ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o -MF CMakeFiles/libliggghts.dir/region_sphere.cpp.o.d -o CMakeFiles/libliggghts.dir/region_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_sphere.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::nread_int(int*, int, FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:863:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 863 | fread(buf,sizeof(int),n,fp); @@ -4028,8 +4057,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:948:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 948 | fread(&value,sizeof(bigint),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o -MF CMakeFiles/libliggghts.dir/region_sphere.cpp.o.d -o CMakeFiles/libliggghts.dir/region_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_sphere.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_union.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_union.cpp.o -MF CMakeFiles/libliggghts.dir/region_union.cpp.o.d -o CMakeFiles/libliggghts.dir/region_union.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_union.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_wedge.cpp.o @@ -4040,10 +4067,19 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/respa.cpp.o -MF CMakeFiles/libliggghts.dir/respa.cpp.o.d -o CMakeFiles/libliggghts.dir/respa.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/respa.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/rotate.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/rotate.cpp.o -MF CMakeFiles/libliggghts.dir/rotate.cpp.o.d -o CMakeFiles/libliggghts.dir/rotate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/rotate.cpp -[ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/run_time.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/run_time.cpp.o -MF CMakeFiles/libliggghts.dir/run_time.cpp.o.d -o CMakeFiles/libliggghts.dir/run_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/run_time.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/run.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/run.cpp.o -MF CMakeFiles/libliggghts.dir/run.cpp.o.d -o CMakeFiles/libliggghts.dir/run.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/run.cpp +[ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/run_time.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/run_time.cpp.o -MF CMakeFiles/libliggghts.dir/run_time.cpp.o.d -o CMakeFiles/libliggghts.dir/run_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/run_time.cpp +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 80 | posix_memalign(&ptr, alignment, sizeof(T)); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/set.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/set.cpp.o -MF CMakeFiles/libliggghts.dir/set.cpp.o.d -o CMakeFiles/libliggghts.dir/set.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/set.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/signal_handling.cpp.o @@ -4054,6 +4090,14 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/special.cpp.o -MF CMakeFiles/libliggghts.dir/special.cpp.o.d -o CMakeFiles/libliggghts.dir/special.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/special.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/superquadric.cpp +[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/tet_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tet_mesh.cpp +[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/thermo.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/thermo.cpp.o -MF CMakeFiles/libliggghts.dir/thermo.cpp.o.d -o CMakeFiles/libliggghts.dir/thermo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/thermo.cpp +[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/timer.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/timer.cpp.o -MF CMakeFiles/libliggghts.dir/timer.cpp.o.d -o CMakeFiles/libliggghts.dir/timer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/timer.cpp +[ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/tri_mesh.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/tri_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/tri_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/tri_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tri_mesh.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function 'void LAMMPS_NS::SignalHandler::int_handler(int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:65:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 65 | write(STDOUT_FILENO, warning.c_str(), len); @@ -4068,14 +4112,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:108:10: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 108 | write(STDOUT_FILENO, warning.c_str(), len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/tet_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tet_mesh.cpp -[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/thermo.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/thermo.cpp.o -MF CMakeFiles/libliggghts.dir/thermo.cpp.o.d -o CMakeFiles/libliggghts.dir/thermo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/thermo.cpp -[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/timer.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/timer.cpp.o -MF CMakeFiles/libliggghts.dir/timer.cpp.o.d -o CMakeFiles/libliggghts.dir/timer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/timer.cpp -[ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/tri_mesh.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/tri_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/tri_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/tri_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tri_mesh.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.1 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o -MF CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o.d -o CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tri_mesh_planar.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/universe.cpp.o @@ -4125,53 +4161,53 @@ mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; mpirun -np 2 --allow-run-as-root --oversubscribe /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-09-19:15:32 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-09-15:14:48 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 2 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Sun Feb 9 19:21:58 2025 +Setting up run at Tue Jan 9 15:40:30 2024 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps Memory usage per processor = 4.29641 Mbytes Step Atoms KinEng rke heattran Volume 0 0 0 0 0 0.0015 -insertion: proc 1 at 0 % -insertion: proc 1 at 10 % -insertion: proc 1 at 20 % -insertion: proc 1 at 30 % -insertion: proc 1 at 40 % -insertion: proc 1 at 50 % -insertion: proc 1 at 60 % -insertion: proc 1 at 70 % -insertion: proc 1 at 80 % -insertion: proc 1 at 90 % insertion: proc 0 at 0 % insertion: proc 0 at 10 % insertion: proc 0 at 20 % insertion: proc 0 at 30 % insertion: proc 0 at 40 % insertion: proc 0 at 50 % +insertion: proc 1 at 0 % +insertion: proc 1 at 10 % insertion: proc 0 at 60 % insertion: proc 0 at 70 % insertion: proc 0 at 80 % +insertion: proc 1 at 20 % +insertion: proc 1 at 30 % +insertion: proc 1 at 40 % +insertion: proc 1 at 50 % insertion: proc 0 at 90 % -insertion: proc 1 at 100 % insertion: proc 0 at 100 % +insertion: proc 1 at 60 % +insertion: proc 1 at 70 % +insertion: proc 1 at 80 % +insertion: proc 1 at 90 % +insertion: proc 1 at 100 % INFO: Particle insertion ins: inserted 889 particle templates (mass 1.906603e+00) at step 1 - a total of 889 particle templates (mass 1.906603e+00) inserted so far. 1 889 0.0858673 0 5719.8098 0.0015 -Loop time of 0.0271341 on 2 procs for 1 steps with 889 atoms, finish time Sun Feb 9 19:21:58 2025 +Loop time of 0.307838 on 2 procs for 1 steps with 889 atoms, finish time Tue Jan 9 15:40:30 2024 -Pair time (%) = 3.8589e-05 (0.142216) -Neigh time (%) = 0.000637117 (2.34803) -Comm time (%) = 0.000225219 (0.830024) -Outpt time (%) = 4.37745e-05 (0.161327) -Other time (%) = 0.0261894 (96.5184) +Pair time (%) = 0.000137041 (0.0445172) +Neigh time (%) = 0.00389623 (1.26567) +Comm time (%) = 0.0208727 (6.78041) +Outpt time (%) = 0.000304369 (0.098873) +Other time (%) = 0.282628 (91.8105) Nlocal: 444.5 ave 446 max 443 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -4184,7 +4220,7 @@ Ave neighs/atom = 1.52418 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Sun Feb 9 19:21:58 2025 +Setting up run at Tue Jan 9 15:40:30 2024 Memory usage per processor = 8.42521 Mbytes Step Atoms KinEng rke heattran Volume @@ -4209,14 +4245,14 @@ 18000 889 1.9134527e-05 9.6788056e-06 5719.8098 0.0015 19000 889 4.4217855e-06 3.7107113e-06 5719.8098 0.0015 20000 889 2.3496863e-06 2.5381488e-06 5719.8098 0.0015 -Loop time of 19.6795 on 2 procs for 19999 steps with 889 atoms, finish time Sun Feb 9 19:22:17 2025 +Loop time of 70.0282 on 2 procs for 19999 steps with 889 atoms, finish time Tue Jan 9 15:41:40 2024 -Pair time (%) = 5.6884 (28.9052) -Neigh time (%) = 0.0866032 (0.440068) -Comm time (%) = 1.84125 (9.35619) -Outpt time (%) = 0.239263 (1.2158) -Other time (%) = 11.824 (60.0828) +Pair time (%) = 11.4691 (16.3778) +Neigh time (%) = 0.224269 (0.320255) +Comm time (%) = 14.5518 (20.78) +Outpt time (%) = 0.533579 (0.761949) +Other time (%) = 43.2495 (61.7601) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -4231,7 +4267,7 @@ Dangerous builds = 0 Setting atom values ... 440 settings made for property/atom -Setting up run at Sun Feb 9 19:22:17 2025 +Setting up run at Tue Jan 9 15:41:40 2024 Memory usage per processor = 8.72219 Mbytes Step Atoms KinEng rke heattran Volume @@ -4266,14 +4302,14 @@ 48000 889 4.1028794e-09 1.8257014e-08 10438.063 0.0015 49000 889 4.1101685e-09 1.8256258e-08 10438.063 0.0015 50000 889 2.8053107e-09 1.4643392e-08 10438.063 0.0015 -Loop time of 37.1956 on 2 procs for 30000 steps with 889 atoms, finish time Sun Feb 9 19:22:55 2025 +Loop time of 110.374 on 2 procs for 30000 steps with 889 atoms, finish time Tue Jan 9 15:43:31 2024 -Pair time (%) = 10.5556 (28.3786) -Neigh time (%) = 0.000991134 (0.00266466) -Comm time (%) = 0.0382762 (0.102905) -Outpt time (%) = 0.400988 (1.07805) -Other time (%) = 26.1997 (70.4378) +Pair time (%) = 22.2771 (20.1833) +Neigh time (%) = 0.00107418 (0.00097322) +Comm time (%) = 0.291751 (0.26433) +Outpt time (%) = 0.885316 (0.802107) +Other time (%) = 86.9185 (78.7492) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -4290,14 +4326,14 @@ mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-09-19:15:32 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-09-15:14:48 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 1 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Sun Feb 9 19:22:56 2025 +Setting up run at Tue Jan 9 15:43:33 2024 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -4317,14 +4353,14 @@ INFO: Particle insertion ins: inserted 890 particle templates (mass 1.908748e+00) at step 1 - a total of 890 particle templates (mass 1.908748e+00) inserted so far. 1 890 0.085963889 0 5726.2438 0.0015 -Loop time of 0.0316773 on 1 procs for 1 steps with 890 atoms, finish time Sun Feb 9 19:22:56 2025 +Loop time of 0.0618011 on 1 procs for 1 steps with 890 atoms, finish time Tue Jan 9 15:43:33 2024 -Pair time (%) = 6.1675e-05 (0.194698) -Neigh time (%) = 0.000867021 (2.73704) -Comm time (%) = 1.682e-05 (0.053098) -Outpt time (%) = 6.1399e-05 (0.193827) -Other time (%) = 0.0306704 (96.8213) +Pair time (%) = 7.2406e-05 (0.11716) +Neigh time (%) = 0.000988615 (1.59967) +Comm time (%) = 1.8206e-05 (0.029459) +Outpt time (%) = 7.2675e-05 (0.117595) +Other time (%) = 0.0606492 (98.1361) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4337,7 +4373,7 @@ Ave neighs/atom = 1.54719 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Sun Feb 9 19:22:56 2025 +Setting up run at Tue Jan 9 15:43:33 2024 Memory usage per processor = 8.46413 Mbytes Step Atoms KinEng rke heattran Volume @@ -4362,14 +4398,14 @@ 18000 890 1.4676598e-05 7.0850812e-06 5726.2438 0.0015 19000 890 3.7770954e-06 4.6853468e-06 5726.2438 0.0015 20000 890 5.3031725e-07 1.3357401e-06 5726.2438 0.0015 -Loop time of 22.4123 on 1 procs for 19999 steps with 890 atoms, finish time Sun Feb 9 19:23:18 2025 +Loop time of 177.12 on 1 procs for 19999 steps with 890 atoms, finish time Tue Jan 9 15:46:31 2024 -Pair time (%) = 13.4245 (59.8978) -Neigh time (%) = 0.215074 (0.959626) -Comm time (%) = 0.0245852 (0.109695) -Outpt time (%) = 0.43897 (1.95861) -Other time (%) = 8.30918 (37.0742) +Pair time (%) = 112.363 (63.4389) +Neigh time (%) = 0.769017 (0.434179) +Comm time (%) = 0.21063 (0.118919) +Outpt time (%) = 2.72152 (1.53654) +Other time (%) = 61.0558 (34.4715) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4384,7 +4420,7 @@ Dangerous builds = 0 Setting atom values ... 445 settings made for property/atom -Setting up run at Sun Feb 9 19:23:18 2025 +Setting up run at Tue Jan 9 15:46:31 2024 Memory usage per processor = 8.75284 Mbytes Step Atoms KinEng rke heattran Volume @@ -4419,14 +4455,14 @@ 48000 890 9.0915381e-09 2.6785102e-08 10498.114 0.0015 49000 890 8.3490816e-10 2.0441102e-08 10498.114 0.0015 50000 890 5.7112432e-09 2.069405e-08 10498.114 0.0015 -Loop time of 36.7856 on 1 procs for 30000 steps with 890 atoms, finish time Sun Feb 9 19:23:55 2025 +Loop time of 395.343 on 1 procs for 30000 steps with 890 atoms, finish time Tue Jan 9 15:53:06 2024 -Pair time (%) = 22.7444 (61.8298) -Neigh time (%) = 0.00107689 (0.00292748) -Comm time (%) = 0.0297758 (0.0809442) -Outpt time (%) = 0.644723 (1.75265) -Other time (%) = 13.3656 (36.3337) +Pair time (%) = 253.327 (64.0777) +Neigh time (%) = 0.0186015 (0.00470516) +Comm time (%) = 0.414006 (0.104721) +Outpt time (%) = 6.10682 (1.54469) +Other time (%) = 135.477 (34.2681) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4445,7 +4481,7 @@ dh_testroot -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_prep -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_auto_install -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build - cd debian/build && make -j16 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd debian/build && make -j15 install DESTDIR=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/reproducible-path/liggghts-3.8.0+repack1 -B/build/reproducible-path/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4935,16 +4971,16 @@ dpkg-shlibdeps: warning: symbol _ZN24vtkRectilinearGridWriter3NewEv used by debian/libliggghts3/usr/lib/x86_64-linux-gnu/libliggghts.so.3.8.0 found in none of the libraries dh_installdeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_gencontrol -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package liggghts-doc: substitution variable ${shlibs:Depends} used, but is not defined +dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_builddeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-9_amd64.deb'. -dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-9_amd64.deb'. -dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-9_all.deb'. dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-9_amd64.deb'. -dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-9_amd64.deb'. +dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-9_amd64.deb'. dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-9_amd64.deb'. +dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-9_amd64.deb'. +dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-9_amd64.deb'. +dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-9_all.deb'. dpkg-genbuildinfo --build=binary -O../liggghts_3.8.0+repack1-9_amd64.buildinfo dpkg-genchanges --build=binary -O../liggghts_3.8.0+repack1-9_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -4952,12 +4988,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2688375/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3093612 and its subdirectories -I: Current time: Sun Feb 9 19:25:22 -12 2025 -I: pbuilder-time-stamp: 1739172322 +I: removing directory /srv/workspace/pbuilder/2688375 and its subdirectories +I: Current time: Tue Jan 9 16:02:12 +14 2024 +I: pbuilder-time-stamp: 1704765732