Diff of the two buildlogs: -- --- b1/build.log 2023-04-26 19:00:23.344080888 +0000 +++ b2/build.log 2023-04-26 19:02:06.859490308 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Apr 26 06:55:18 -12 2023 -I: pbuilder-time-stamp: 1682535318 +I: Current time: Wed May 29 15:23:25 +14 2024 +I: pbuilder-time-stamp: 1716945805 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./cwltool_3.1.20230209161050.orig.tar.gz] I: copying [./cwltool_3.1.20230209161050-1.debian.tar.xz] I: Extracting source -gpgv: Signature made Thu Feb 9 06:11:52 2023 -12 +gpgv: Signature made Fri Feb 10 08:11:52 2023 +14 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cwltool_3.1.20230209161050-1.dsc: no acceptable signature found @@ -28,135 +28,167 @@ dpkg-source: info: applying python3 I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4154408/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 29 15:23 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='09de7289d7014e12a2e44d4f3d9cb2de' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4154408' - PS1='# ' - PS2='> ' + INVOCATION_ID=af676bdc84dc47f3904d8368e046f471 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=261714 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3AncqGyW/pbuilderrc_sZiW --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3AncqGyW/b1 --logfile b1/build.log cwltool_3.1.20230209161050-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3AncqGyW/pbuilderrc_1qOJ --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3AncqGyW/b2 --logfile b2/build.log --extrapackages usrmerge cwltool_3.1.20230209161050-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos1-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux I: ls -l /bin total 5632 - -rwxr-xr-x 1 root root 1265648 Apr 23 09:23 bash - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 - -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore - -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat - -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp - -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod - -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown - -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp - -rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash - -rwxr-xr-x 1 root root 121904 Sep 20 2022 date - -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd - -rwxr-xr-x 1 root root 102200 Sep 20 2022 df - -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir - -rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg - lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname - -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo - -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep - -rwxr-xr-x 1 root root 35664 Sep 20 2022 false - -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep - -rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt - -rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount - -rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname - -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln - -rwxr-xr-x 1 root root 53024 Mar 23 00:40 login - -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls - -rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk - -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir - -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod - -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp - -rwxr-xr-x 1 root root 59712 Mar 22 22:02 more - -rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount - -rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint - -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv - lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd - lrwxrwxrwx 1 root root 4 Apr 23 09:23 rbash -> bash - -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink - -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm - -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Nov 2 04:31 run-parts - -rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed - lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash - -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep - -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty - -rwsr-xr-x 1 root root 72000 Mar 22 22:02 su - -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync - -rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar - -rwxr-xr-x 1 root root 14520 Nov 2 04:31 tempfile - -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch - -rwxr-xr-x 1 root root 35664 Sep 20 2022 true - -rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server - -rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount - -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir - -rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl - lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/4154408/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1265648 Apr 24 2023 bash + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bunzip2 + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzcat + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzip2 + -rwxr-xr-x 1 root root 14568 Sep 19 2022 bzip2recover + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore + -rwxr-xr-x 1 root root 44016 Sep 21 2022 cat + -rwxr-xr-x 1 root root 68656 Sep 21 2022 chgrp + -rwxr-xr-x 1 root root 64496 Sep 21 2022 chmod + -rwxr-xr-x 1 root root 72752 Sep 21 2022 chown + -rwxr-xr-x 1 root root 151152 Sep 21 2022 cp + -rwxr-xr-x 1 root root 125640 Jan 6 2023 dash + -rwxr-xr-x 1 root root 121904 Sep 21 2022 date + -rwxr-xr-x 1 root root 89240 Sep 21 2022 dd + -rwxr-xr-x 1 root root 102200 Sep 21 2022 df + -rwxr-xr-x 1 root root 151344 Sep 21 2022 dir + -rwxr-xr-x 1 root root 88656 Mar 24 2023 dmesg + lrwxrwxrwx 1 root root 8 Dec 20 2022 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Dec 20 2022 domainname -> hostname + -rwxr-xr-x 1 root root 43856 Sep 21 2022 echo + -rwxr-xr-x 1 root root 41 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 35664 Sep 21 2022 false + -rwxr-xr-x 1 root root 41 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 85600 Mar 24 2023 findmnt + -rwsr-xr-x 1 root root 35128 Mar 23 2023 fusermount + -rwxr-xr-x 1 root root 203152 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98136 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22680 Dec 20 2022 hostname + -rwxr-xr-x 1 root root 72824 Sep 21 2022 ln + -rwxr-xr-x 1 root root 53024 Mar 24 2023 login + -rwxr-xr-x 1 root root 151344 Sep 21 2022 ls + -rwxr-xr-x 1 root root 207168 Mar 24 2023 lsblk + -rwxr-xr-x 1 root root 97552 Sep 21 2022 mkdir + -rwxr-xr-x 1 root root 72912 Sep 21 2022 mknod + -rwxr-xr-x 1 root root 43952 Sep 21 2022 mktemp + -rwxr-xr-x 1 root root 59712 Mar 24 2023 more + -rwsr-xr-x 1 root root 59704 Mar 24 2023 mount + -rwxr-xr-x 1 root root 18744 Mar 24 2023 mountpoint + -rwxr-xr-x 1 root root 142968 Sep 21 2022 mv + lrwxrwxrwx 1 root root 8 Dec 20 2022 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43952 Sep 21 2022 pwd + lrwxrwxrwx 1 root root 4 Apr 24 2023 rbash -> bash + -rwxr-xr-x 1 root root 52112 Sep 21 2022 readlink + -rwxr-xr-x 1 root root 72752 Sep 21 2022 rm + -rwxr-xr-x 1 root root 56240 Sep 21 2022 rmdir + -rwxr-xr-x 1 root root 27560 Nov 3 2022 run-parts + -rwxr-xr-x 1 root root 126424 Jan 6 2023 sed + lrwxrwxrwx 1 root root 9 May 29 15:23 sh -> /bin/bash + -rwxr-xr-x 1 root root 43888 Sep 21 2022 sleep + -rwxr-xr-x 1 root root 85008 Sep 21 2022 stty + -rwsr-xr-x 1 root root 72000 Mar 24 2023 su + -rwxr-xr-x 1 root root 39824 Sep 21 2022 sync + -rwxr-xr-x 1 root root 531984 Apr 7 2023 tar + -rwxr-xr-x 1 root root 14520 Nov 3 2022 tempfile + -rwxr-xr-x 1 root root 109616 Sep 21 2022 touch + -rwxr-xr-x 1 root root 35664 Sep 21 2022 true + -rwxr-xr-x 1 root root 14568 Mar 23 2023 ulockmgr_server + -rwsr-xr-x 1 root root 35128 Mar 24 2023 umount + -rwxr-xr-x 1 root root 43888 Sep 21 2022 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 151344 Sep 21 2022 vdir + -rwxr-xr-x 1 root root 72024 Mar 24 2023 wdctl + lrwxrwxrwx 1 root root 8 Dec 20 2022 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -443,7 +475,7 @@ Get: 189 http://deb.debian.org/debian bookworm/main amd64 python3-rdflib-jsonld all 0.6.1-2 [14.4 kB] Get: 190 http://deb.debian.org/debian bookworm/main amd64 python3-shellescape all 3.4.1-5 [5040 B] Get: 191 http://deb.debian.org/debian bookworm/main amd64 python3-sparqlwrapper all 1.8.5-2 [35.5 kB] -Fetched 68.8 MB in 3s (22.4 MB/s) +Fetched 68.8 MB in 1s (75.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) @@ -1235,8 +1267,19 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/cwltool-3.1.20230209161050/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cwltool_3.1.20230209161050-1_source.changes +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +removed '/etc/unsupported-skip-usrmerge-conversion' +The system has been successfully converted. +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/cwltool-3.1.20230209161050/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cwltool_3.1.20230209161050-1_source.changes dpkg-buildpackage: info: source package cwltool dpkg-buildpackage: info: source version 3.1.20230209161050-1 dpkg-buildpackage: info: source distribution unstable @@ -3350,7 +3393,7 @@ Copying cwltool.egg-info to build/bdist.linux-x86_64/wheel/cwltool-3.1.20230209161050.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/cwltool-3.1.20230209161050.dist-info/WHEEL -creating '/build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/.tmp-5ggnto89/cwltool-3.1.20230209161050-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it +creating '/build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/.tmp-plku0wvp/cwltool-3.1.20230209161050-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'cwltool/__init__.py' adding 'cwltool/__main__.py' adding 'cwltool/argparser.py' @@ -4123,73 +4166,74 @@ --ignore-glob "*test_http_input.py" \ -k 'not (test_http_path_mapping or test_get_subgraph or test_udocker_usage_should_not_write_cid_file or test_udocker_should_display_memory_usage or test_content_types or test_get_step or test_udocker_nobanner)' \ -n auto --ignore cwltool/schemas/ -rs --pyargs cwltool" dh_auto_test -I: pybuild base:240: cd /build/cwltool-3.1.20230209161050; export PATH=/build/cwltool-3.1.20230209161050/debian/python3-cwltool/usr/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games ; cd /build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/build; export PYTHONPATH=/build/cwltool-3.1.20230209161050; python3.11 -m pytest --ignore-glob *test_http_input.py -k 'not (test_http_path_mapping or test_get_subgraph or test_udocker_usage_should_not_write_cid_file or test_udocker_should_display_memory_usage or test_content_types or test_get_step or test_udocker_nobanner)' -n auto --ignore cwltool/schemas/ -rs --pyargs cwltool +I: pybuild base:240: cd /build/cwltool-3.1.20230209161050; export PATH=/build/cwltool-3.1.20230209161050/debian/python3-cwltool/usr/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path ; cd /build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/build; export PYTHONPATH=/build/cwltool-3.1.20230209161050; python3.11 -m pytest --ignore-glob *test_http_input.py -k 'not (test_http_path_mapping or test_get_subgraph or test_udocker_usage_should_not_write_cid_file or test_udocker_should_display_memory_usage or test_content_types or test_get_step or test_udocker_nobanner)' -n auto --ignore cwltool/schemas/ -rs --pyargs cwltool ============================= test session starts ============================== platform linux -- Python 3.11.2, pytest-7.2.1, pluggy-1.0.0+repack rootdir: /build/cwltool-3.1.20230209161050, configfile: tox.ini plugins: xdist-3.1.0, mock-3.8.2 -gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I -gw0 [590] / gw1 [590] / gw2 [590] / gw3 [590] / gw4 [590] / gw5 [590] / gw6 [590] / gw7 [590] / gw8 [590] / gw9 [590] / gw10 [590] / gw11 [590] / gw12 [590] / gw13 [590] / gw14 [590] +gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I +gw0 [590] / gw1 [590] / gw2 [590] / gw3 [590] / gw4 [590] / gw5 [590] / gw6 [590] / gw7 [590] / gw8 [590] / gw9 [590] / gw10 [590] / gw11 [590] / gw12 [590] / gw13 [590] / gw14 [590] / gw15 [590] -ss.ss.s.....sss....s....ss..........ssss................................ [ 12%] -........................................................................ [ 24%] -.ssssssssssssssssssssssssssssssssss.........ssssss...........ss......... [ 36%] -.....s...ss......ss.....ss........................ss.sssssssssssssss.s.. [ 48%] -..................s....s....s.......s.sssssss..s.......s.....ss...sss... [ 60%] -.....s....ss.......................s.....................sssss....ss..ss [ 73%] -...s.....sssssssssssssssss......s.s.s.......ss..sss....sss.ssssss....... [ 85%] -......ss........s............s......ssss...s....s....s.......s.......... [ 97%] -.............. [100%] +s..s.ss................ssss.............sssssss......................... [ 12%] +.................................................s....................... [ 24%] +...........ss.s.ssssssss.....ssssssssss.sss.s.sssssss...s.sssssss....... [ 36%] +........sssss.s....ss.....ss..........ss.........ssssssssssssss......... [ 48%] +....................ss...ssss.....ss............ss.........sss..sssss... [ 61%] +....ss.............s.....s..............sssssssssssss...............s... [ 73%] +....sssssssssssssss............ss..ss..........s..sssssss....s........... [ 85%] +ss..s........ss..s........s....sssss...................s.s.............. [ 97%] +............ [100%] =============================== warnings summary =============================== -cwltool/tests/test_path_checks.py:110: 15 warnings +cwltool/tests/test_path_checks.py:110: 16 warnings /build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/build/cwltool/tests/test_path_checks.py:110: PytestCollectionWarning: cannot collect test class 'TestFsAccess' because it has a __init__ constructor (from: .pybuild/cpython3_3.11_cwltool/build/cwltool/tests/test_path_checks.py) class TestFsAccess(StdFsAccess): -.pybuild/cpython3_3.11_cwltool/build/cwltool/tests/test_examples.py::test_js_console_cmd_line_tool[] - /usr/lib/python3/dist-packages/cwl_utils/sandboxjs.py:453: FutureWarning: Possible nested set at position 2 - re.findall(r"^[[](?:log|err)[]].*$", stderr, flags=re.MULTILINE) - .pybuild/cpython3_3.11_cwltool/build/cwltool/tests/test_examples.py::test_print_dot /usr/lib/python3/dist-packages/rdflib/plugins/sparql/__init__.py:52: DeprecationWarning: SelectableGroups dict interface is deprecated. Use select. for ep in all_entry_points.get(PLUGIN_ENTRY_POINT, []): +.pybuild/cpython3_3.11_cwltool/build/cwltool/tests/test_examples.py::test_js_console_cmd_line_tool[--parallel] +.pybuild/cpython3_3.11_cwltool/build/cwltool/tests/test_examples.py::test_js_console_cmd_line_tool[] + /usr/lib/python3/dist-packages/cwl_utils/sandboxjs.py:453: FutureWarning: Possible nested set at position 2 + re.findall(r"^[[](?:log|err)[]].*$", stderr, flags=re.MULTILINE) + -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ SKIPPED [1] cwltool/tests/test_dependencies.py:25: galaxy-tool-util is not installed SKIPPED [1] cwltool/tests/test_dependencies.py:45: galaxy-tool-util is not installed SKIPPED [1] cwltool/tests/test_cuda.py:46: nvidia-smi required for CUDA not detected SKIPPED [1] cwltool/tests/test_cuda.py:55: nvidia-smi required for CUDA not detected -SKIPPED [1] cwltool/tests/test_environment.py:192: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_dependencies.py:110: galaxy-tool-util is not installed SKIPPED [1] cwltool/tests/test_dependencies.py:116: modulecmd not installed -SKIPPED [1] cwltool/tests/test_docker.py:75: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_environment.py:192: Requires the singularity executable on the system path. SKIPPED [1] cwltool/tests/test_dependencies.py:140: modulecmd not installed SKIPPED [1] cwltool/tests/test_docker.py:11: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_environment.py:192: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_environment.py:192: Requires the singularity executable on the system path. +SKIPPED [1] cwltool/tests/test_docker.py:75: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_docker.py:92: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_docker.py:109: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_docker.py:125: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_docker_info.py:4: Requires the docker executable on the system path. -SKIPPED [4] cwltool/tests/test_examples.py:1103: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_examples.py:900: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1118: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1139: Requires the docker executable on the system path. +SKIPPED [4] cwltool/tests/test_examples.py:1103: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1164: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1191: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1215: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1236: Requires the docker executable on the system path. +SKIPPED [4] cwltool/tests/test_examples.py:1439: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_examples.py:1357: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1261: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1284: Requires the docker executable on the system path. -SKIPPED [4] cwltool/tests/test_examples.py:1439: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_examples.py:1461: Requires the docker executable on the system path. -SKIPPED [4] cwltool/tests/test_examples.py:1492: Requires the docker executable on the system path. SKIPPED [3] cwltool/tests/test_check.py:11: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_docker.py:47: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_docker.py:61: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_environment.py:212: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_environment.py:212: Requires the singularity executable on the system path. +SKIPPED [1] cwltool/tests/test_docker.py:47: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_docker.py:61: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_environment.py:236: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_environment.py:236: Requires the singularity executable on the system path. -SKIPPED [1] cwltool/tests/test_ext.py:20: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_ext.py:30: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_ext.py:41: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_ext.py:53: Requires the docker executable on the system path. @@ -4204,48 +4248,48 @@ SKIPPED [1] cwltool/tests/test_ext.py:225: This test is non-deterministic SKIPPED [1] cwltool/tests/test_ext.py:235: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_ext.py:242: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_examples.py:1357: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_iwdr.py:23: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_examples.py:1655: Need a container engine (docker, podman, or singularity) or jq to run this test. -SKIPPED [1] cwltool/tests/test_examples.py:900: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_ext.py:14: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_ext.py:20: Requires the docker executable on the system path. +SKIPPED [4] cwltool/tests/test_examples.py:1492: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_examples.py:1424: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_cuda.py:25: nvidia-smi required for CUDA not detected -SKIPPED [4] cwltool/tests/test_examples.py:1086: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_cuda.py:35: nvidia-smi required for CUDA not detected +SKIPPED [1] cwltool/tests/test_iwdr.py:189: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_iwdr.py:250: Requires the singularity executable on the system path. SKIPPED [1] cwltool/tests/test_iwdr.py:314: Requires the singularity executable on the system path. -SKIPPED [1] cwltool/tests/test_iwdr.py:47: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_examples.py:1424: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_ext.py:14: Requires the docker executable on the system path. +SKIPPED [4] cwltool/tests/test_examples.py:1086: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_js_sandbox.py:73: Requires the podman executable on the system path. SKIPPED [1] cwltool/tests/test_js_sandbox.py:93: Requires the singularity executable on the system path. +SKIPPED [1] cwltool/tests/test_misc_cli.py:43: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_iwdr.py:47: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_iwdr.py:80: Requires the docker executable on the system path. SKIPPED [9] cwltool/tests/test_override.py:77: Requires the docker executable on the system path. SKIPPED [4] cwltool/tests/test_override.py:120: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_iwdr.py:189: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_iwdr.py:250: Requires the singularity executable on the system path. -SKIPPED [1] cwltool/tests/test_misc_cli.py:43: Requires the docker executable on the system path. -SKIPPED [2] cwltool/tests/test_pack.py:188: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_path_checks.py:40: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_examples.py:1655: Need a container engine (docker, podman, or singularity) or jq to run this test. +SKIPPED [1] cwltool/tests/test_iwdr.py:23: Requires the docker executable on the system path. SKIPPED [7] cwltool/tests/test_path_checks.py:62: Requires the docker executable on the system path. SKIPPED [7] cwltool/tests/test_path_checks.py:86: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_parallel.py:24: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_path_checks.py:40: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_relocate.py:15: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_relocate.py:21: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_secrets.py:60: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_secrets.py:81: Requires the singularity executable on the system path. -SKIPPED [1] cwltool/tests/test_secrets.py:102: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_singularity.py:20: Requires that version 2.6.x of singularity executable version is on the system path. SKIPPED [1] cwltool/tests/test_singularity.py:45: Requires the singularity executable on the system path. +SKIPPED [1] cwltool/tests/test_secrets.py:102: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_singularity.py:84: Requires the singularity executable on the system path. SKIPPED [1] cwltool/tests/test_singularity.py:99: Requires the singularity executable on the system path. -SKIPPED [1] cwltool/tests/test_singularity.py:115: Requires that version 2.6.x of singularity executable version is on the system path. SKIPPED [1] cwltool/tests/test_singularity.py:139: Requires that version 3.x of singularity executable version is on the system path. +SKIPPED [2] cwltool/tests/test_pack.py:188: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_parallel.py:11: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_parallel.py:24: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_subgraph.py:221: Requires the docker executable on the system path. -SKIPPED [1] cwltool/tests/test_tmpdir.py:111: Requires the docker executable on the system path. -SKIPPED [6] cwltool/tests/test_toolargparse.py:126: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_singularity.py:115: Requires that version 2.6.x of singularity executable version is on the system path. SKIPPED [1] cwltool/tests/test_subgraph.py:288: Requires the docker executable on the system path. SKIPPED [1] cwltool/tests/test_subgraph.py:324: Requires the docker executable on the system path. -=========== 430 passed, 160 skipped, 17 warnings in 66.35s (0:01:06) =========== +SKIPPED [1] cwltool/tests/test_tmpdir.py:111: Requires the docker executable on the system path. +SKIPPED [1] cwltool/tests/test_subgraph.py:221: Requires the docker executable on the system path. +SKIPPED [6] cwltool/tests/test_toolargparse.py:126: Requires the docker executable on the system path. +================ 430 passed, 160 skipped, 19 warnings in 23.10s ================ I: pybuild pybuild:333: rm -Rf /build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/build/tmp/ /build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/build/main.cwl /build/cwltool-3.1.20230209161050/.pybuild/cpython3_3.11_cwltool/build/output.txt* find .pybuild -name "out" -type f -delete make[1]: Leaving directory '/build/cwltool-3.1.20230209161050' @@ -4431,12 +4475,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/261714/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4154408 and its subdirectories -I: Current time: Wed Apr 26 07:00:22 -12 2023 -I: pbuilder-time-stamp: 1682535622 +I: removing directory /srv/workspace/pbuilder/261714 and its subdirectories +I: Current time: Wed May 29 15:25:07 +14 2024 +I: pbuilder-time-stamp: 1716945907